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Search of human proteins with 10518338
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10518338 crystallin, gamma C [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10518338 crystallin, gamma C [Homo sapiens] 375 e-104
gi|148491074 crystallin, gamma B [Homo sapiens] 303 4e-83
gi|148491057 crystallin, gamma A [Homo sapiens] 290 3e-79
gi|13377002 crystallin, gamma D [Homo sapiens] 273 5e-74
gi|8922120 crystallin, gamma S [Homo sapiens] 207 4e-54
gi|89886227 absent in melanoma 1-like [Homo sapiens] 123 9e-29
gi|12056461 crystallin, beta A3 [Homo sapiens] 118 3e-27
gi|4758074 crystallin, beta B3 [Homo sapiens] 118 3e-27
gi|4503063 crystallin, beta B2 [Homo sapiens] 114 4e-26
gi|4503061 crystallin, beta B1 [Homo sapiens] 112 2e-25
gi|4503059 crystallin, beta A4 [Homo sapiens] 110 8e-25
gi|16936542 crystallin, beta A2 [Homo sapiens] 99 2e-21
gi|16936540 crystallin, beta A2 [Homo sapiens] 99 2e-21
gi|7019357 crystallin, beta A2 [Homo sapiens] 99 2e-21
gi|21389517 gammaN-crystallin [Homo sapiens] 95 3e-20
gi|62988361 absent in melanoma 1 [Homo sapiens] 86 1e-17
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi... 81 4e-16
gi|4505819 phosphatidylinositol-5-phosphate 4-kinase, type II, b... 30 1.4
gi|22027630 TNF receptor-associated factor 6 [Homo sapiens] 28 4.0
gi|4759254 TNF receptor-associated factor 6 [Homo sapiens] 28 4.0
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 28 5.2
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 28 5.2
gi|55741845 valyl-tRNA synthetase 2, mitochondrial [Homo sapiens] 27 6.8
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 27 6.8
>gi|10518338 crystallin, gamma C [Homo sapiens]
Length = 174
Score = 375 bits (963), Expect = e-104
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR
Sbjct: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
Query: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY
Sbjct: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
>gi|148491074 crystallin, gamma B [Homo sapiens]
Length = 175
Score = 303 bits (777), Expect = 4e-83
Identities = 138/175 (78%), Positives = 158/175 (90%), Gaps = 1/175 (0%)
Query: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
MGKITFYEDRAFQGRSYE TTDCPNLQPYFSRCNSIRVESGCWM+YERPNYQG QY LRR
Sbjct: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLI-PQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLS 119
GEYPDYQQWMGLSDSIRSCCLI P + ++R+++Y+R++ +G M EL++DC S+QDRFHL+
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
Query: 120 EIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
EI SL+VLEG W+LYE+PNYRGRQYLLRP EYRR DWGA +AK GSLRRV+DLY
Sbjct: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
>gi|148491057 crystallin, gamma A [Homo sapiens]
Length = 174
Score = 290 bits (743), Expect = 3e-79
Identities = 130/174 (74%), Positives = 147/174 (84%)
Query: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
MGKITFYEDR FQGR Y +DCPNL+ YFSRCNSIRV+SGCWMLYERPNYQG QY LRR
Sbjct: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
G+YPDYQ WMGLSDS++SC +IP T SH+LRLYER+D++GLM EL++DC + + F L E
Sbjct: 61 GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120
Query: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
I SLHVLEGCWVLYE+PNYRGRQYLLRP +YRR DWG DAK GSLRRV DLY
Sbjct: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
>gi|13377002 crystallin, gamma D [Homo sapiens]
Length = 174
Score = 273 bits (698), Expect = 5e-74
Identities = 124/172 (72%), Positives = 144/172 (83%)
Query: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
MGKIT YEDR FQGR YE ++D PNLQPY SRCNS RV+SGCWMLYE+PNY G QY LRR
Sbjct: 1 MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
G+Y D+QQWMGLSDS+RSC LIP + SHR+RLYERED++G M+E +EDC +QDRF +E
Sbjct: 61 GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
Query: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVD 172
I SL+VLEG WVLYEL NYRGRQYLL P +YRR QDWGA +A+ GSLRRV+D
Sbjct: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
>gi|8922120 crystallin, gamma S [Homo sapiens]
Length = 178
Score = 207 bits (527), Expect = 4e-54
Identities = 92/172 (53%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRGE 62
KITFYED+ FQGR Y+ DC + Y SRCNSI+VE G W +YERPN+ G Y+L +GE
Sbjct: 7 KITFYEDKNFQGRRYDCDCDCADFHTYLSRCNSIKVEGGTWAVYERPNFAGYMYILPQGE 66
Query: 63 YPDYQQWMGLSDSIRSCCLI--PQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120
YP+YQ+WMGL+D + SC + P ++++++E+ D G M E +EDCPSI ++FH+ E
Sbjct: 67 YPEYQRWMGLNDRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQFHMRE 126
Query: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVD 172
I S VLEG W+ YELPNYRGRQYLL +EYR+ DWGA S RR+V+
Sbjct: 127 IHSCKVLEGVWIFYELPNYRGRQYLLDKKEYRKPIDWGAASPAVQSFRRIVE 178
>gi|89886227 absent in melanoma 1-like [Homo sapiens]
Length = 616
Score = 123 bits (308), Expect = 9e-29
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 7 YEDRAFQGRSYETTTDCPNLQ-------PYFSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
YE FQGRS+E + D NLQ P+ + S+RV GCW+ YE+ ++G QYLL
Sbjct: 128 YEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLE 187
Query: 60 RGEYPDYQQWMGLSDSIRSCCLIPQTVSH-RLRLYEREDHKGLMMELSEDCPSIQDRFHL 118
GEYPD+ W G + + S +I + L+E D +G +E+S+ P ++ H
Sbjct: 188 EGEYPDWSHWGGYDELLTSLRVIRTDFGDPAVVLFEAMDFEGHGVEVSKALPDVELVQHG 247
Query: 119 SEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDL 173
+++HVL G WV Y+ + G QY+L YR C+DWGA ++ SL+ V+ +
Sbjct: 248 PSTQAIHVLSGVWVAYQEVGFSGEQYVLEKGVYRNCEDWGAGNSTLASLQPVLQV 302
Score = 88.2 bits (217), Expect = 3e-18
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPYFS--RCNSIRVESGCWMLYERPNYQGQQYLLRR 60
+I+ + + +G + T N Q + S V +G W+LY +P ++ Y+L
Sbjct: 29 EISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLFEDTPYILEP 88
Query: 61 GEYPDYQQWMGLSDSIRS-------CCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQ 113
GEYP + W S+ S C + + R +YE +G E+S D ++Q
Sbjct: 89 GEYPTSEAWGTSDPSVGSLKPMRLGCPSVEKPGEPRAVVYEAPGFQGRSWEVSRDIYNLQ 148
Query: 114 -----DRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLR 168
HL+ + SL VL GCWV YE +RG QYLL EY WG D SLR
Sbjct: 149 QPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYPDWSHWGGYDELLTSLR 208
Score = 65.9 bits (159), Expect = 2e-11
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 4 ITFYEDRAFQGRSYETTTDCPNLQ--PYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
+ +E F+G E + P+++ + +I V SG W+ Y+ + G+QY+L +G
Sbjct: 219 VVLFEAMDFEGHGVEVSKALPDVELVQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKG 278
Query: 62 EYPDYQQWMGLSDSIRSCCLIPQTVSH------RLRLYEREDHKGLMMELSEDCPSIQDR 115
Y + + W + ++ S + Q H +++L+ R D G +D ++
Sbjct: 279 VYRNCEDWGAGNSTLASLQPVLQVGEHDLHFVSKIQLFSRPDFLGDHFSFEDDQAALPAS 338
Query: 116 FHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKA-GSLRRV 170
F +S V G W+L++ N+ G Q++L E+ G + + GSL++V
Sbjct: 339 F---RPQSCRVHGGSWILFDETNFEGDQHILSEGEFPTLTAMGCLASTVLGSLQKV 391
Score = 63.9 bits (154), Expect = 7e-11
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
+ KI + F G + D L F R S RV G W+L++ N++G Q++L
Sbjct: 310 VSKIQLFSRPDFLGDHFSFEDDQAALPASF-RPQSCRVHGGSWILFDETNFEGDQHILSE 368
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLR-----LYEREDHKGLMMELSEDCPSIQDR 115
GE+P L+ ++ Q VS LY E +G +ELS + S+Q
Sbjct: 369 GEFPTLTAMGCLASTVLGSL---QKVSLHFSEPSIFLYGLECFEGKEIELSREVRSLQAE 425
Query: 116 FHLSEIRSLHVLEGCWVLYELPNYRGRQYLL 146
+ + S+ + G WVL E ++RGRQ+L+
Sbjct: 426 GFNNHVLSVRIKGGIWVLCEHSDFRGRQWLV 456
Score = 35.8 bits (81), Expect = 0.019
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 4 ITFYEDRAFQGRSYETTTDCPNLQP--YFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
I Y F+G+ E + + +LQ + + S+R++ G W+L E +++G+Q+L+
Sbjct: 400 IFLYGLECFEGKEIELSREVRSLQAEGFNNHVLSVRIKGGIWVLCEHSDFRGRQWLVGSC 459
Query: 62 EYPDYQQWMG 71
E ++ + G
Sbjct: 460 EITNWLTYSG 469
>gi|12056461 crystallin, beta A3 [Homo sapiens]
Length = 215
Score = 118 bits (295), Expect = 3e-27
Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 16/183 (8%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNL-QPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
KIT Y+ FQG+ E T+ CPN+ + F S++VESG W+ YE ++ GQQ++L RG
Sbjct: 32 KITIYDQENFQGKRMEFTSSCPNVSERSFDNVRSLKVESGAWIGYEHTSFCGQQFILERG 91
Query: 62 EYPDYQQWMGLSD-------SIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQD 114
EYP + W G + S R C S ++ ++E+E+ G E+S+D PS+Q
Sbjct: 92 EYPRWDAWSGSNAYHIERLMSFRPICSANHKES-KMTIFEKENFIGRQWEISDDYPSLQA 150
Query: 115 R-FHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQ----EYRRCQDWG--AMDAKAGSL 167
+ +E+ S+ + G WV Y+ P YRG QY+L +Y+ ++WG A ++ S+
Sbjct: 151 MGWFNNEVGSMKIQSGAWVCYQYPGYRGYQYILECDHHGGDYKHWREWGSHAQTSQIQSI 210
Query: 168 RRV 170
RR+
Sbjct: 211 RRI 213
>gi|4758074 crystallin, beta B3 [Homo sapiens]
Length = 211
Score = 118 bits (295), Expect = 3e-27
Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNL-QPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
K+ YE FQG+ E + +CP+L + SI+VESG W+ +E ++G+Q++L +G
Sbjct: 25 KVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVLEKG 84
Query: 62 EYPDYQQWMGLSDSIRSCCLIPQTVS---HRLRLYEREDHKGLMMEL-SEDCPSIQDRFH 117
+YP + W DS L P + H+L L+E G ME+ +D PS+
Sbjct: 85 DYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFENPAFSGRKMEIVDDDVPSLWAHGF 144
Query: 118 LSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVD 172
+ S+ + G WV YE P YRGRQY+ EYR +W A + S+RR+ D
Sbjct: 145 QDRVASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQPQLQSVRRIRD 199
Score = 53.9 bits (128), Expect = 7e-08
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 87 SHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLL 146
S+++ LYE E+ +G ELS +CPS+ D L ++ S+ V G W+ +E +RG Q++L
Sbjct: 23 SYKVILYELENFQGKRCELSAECPSLTDSL-LEKVGSIQVESGPWLAFESRAFRGEQFVL 81
Query: 147 RPQEYRRCQDW 157
+Y R W
Sbjct: 82 EKGDYPRWDAW 92
>gi|4503063 crystallin, beta B2 [Homo sapiens]
Length = 205
Score = 114 bits (285), Expect = 4e-26
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY-FSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
KI +E FQG S+E CPNL+ + S+ V++G W+ YE+ N +G+Q++ +G
Sbjct: 18 KIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKG 77
Query: 62 EYPDYQQWMGL--SDSIRSCCLIP-QTVSHRLRLYEREDHKGLMMEL-SEDCPSIQDRFH 117
EYP + W +DS+ S I + H++ LYE + G ME+ +D PS +
Sbjct: 78 EYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNFTGKKMEIIDDDVPSFHAHGY 137
Query: 118 LSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDL 173
++ S+ V G WV Y+ P YRG QYLL +Y+ D+GA + S+RR+ D+
Sbjct: 138 QEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSSDFGAPHPQVQSVRRIRDM 193
Score = 47.8 bits (112), Expect = 5e-06
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 83 PQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGR 142
PQ+++ ++ ++E+E+ +G EL+ CP++++ + + S+ V G WV YE N +G
Sbjct: 12 PQSLNPKIIIFEQENFQGHSHELNGPCPNLKET-GVEKAGSVLVQAGPWVGYEQANCKGE 70
Query: 143 QYLLRPQEYRRCQDW 157
Q++ EY R W
Sbjct: 71 QFVFEKGEYPRWDSW 85
>gi|4503061 crystallin, beta B1 [Homo sapiens]
Length = 252
Score = 112 bits (279), Expect = 2e-25
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY-FSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
++ +E FQGR E + +C NL F R SI V +G W+ +E+ N++G+ ++L +G
Sbjct: 60 RLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKG 119
Query: 62 EYPDYQQWMGLSDSIRSCCLIP---QTVSHRLRLYEREDHKGLMMELS-EDCPSIQDRFH 117
EYP + W S R P H++ L+E + KG +E+ +D PS+
Sbjct: 120 EYPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGF 179
Query: 118 LSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVD 172
+ S+ V G WV Y+ P YRG QYLL P ++R +WGA + SLRR+ D
Sbjct: 180 SDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRD 234
>gi|4503059 crystallin, beta A4 [Homo sapiens]
Length = 196
Score = 110 bits (274), Expect = 8e-25
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 14/182 (7%)
Query: 3 KITFYEDRAFQGRSYETTTDCPN-LQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
K+ +++ FQGR +E T +CP+ L+ F S++V SG W+ +E +QGQQY+L RG
Sbjct: 13 KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
Query: 62 EYPDYQQWMGLS--DSIRSCCLIPQTVSH----RLRLYEREDHKGLMMELSEDCPSIQDR 115
EYP + W G + + R P ++ RL ++E+E+ G ELS+D PS+Q
Sbjct: 73 EYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAM 132
Query: 116 -FHLSEIRSLHVLEGCWVLYELPNYRGRQYLL----RPQEYRRCQDWG--AMDAKAGSLR 168
+ +E+ S HV G WV + P YRG QY+L +Y+ ++WG A + S+R
Sbjct: 133 GWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIR 192
Query: 169 RV 170
R+
Sbjct: 193 RI 194
>gi|16936542 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 98.6 bits (244), Expect = 2e-21
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 4 ITFYEDRAFQGRSYETTTDCPNL--QPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QGQQ++L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCLIPQTV------SHRLRLYEREDHKGLMMELSEDCPSIQDR 115
+YP + W G S + L + V R+ L+E ++ +G +L +D PS+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 FHLS-EIRSLHVLEGCWVLYELPNYRGRQYLL 146
S ++ SL V G WV Y+ P YRG QY+L
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVL 165
Score = 56.2 bits (134), Expect = 1e-08
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 90 LRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQ 149
L L++ ED +G L DC ++ +R L +RS+ V G WV +E P+++G+Q++L
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 150 EYRRCQDW 157
+Y R W
Sbjct: 74 DYPRWSAW 81
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY---FSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G QY+L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|16936540 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 98.6 bits (244), Expect = 2e-21
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 4 ITFYEDRAFQGRSYETTTDCPNL--QPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QGQQ++L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCLIPQTV------SHRLRLYEREDHKGLMMELSEDCPSIQDR 115
+YP + W G S + L + V R+ L+E ++ +G +L +D PS+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 FHLS-EIRSLHVLEGCWVLYELPNYRGRQYLL 146
S ++ SL V G WV Y+ P YRG QY+L
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVL 165
Score = 56.2 bits (134), Expect = 1e-08
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 90 LRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQ 149
L L++ ED +G L DC ++ +R L +RS+ V G WV +E P+++G+Q++L
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 150 EYRRCQDW 157
+Y R W
Sbjct: 74 DYPRWSAW 81
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY---FSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G QY+L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|7019357 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 98.6 bits (244), Expect = 2e-21
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 4 ITFYEDRAFQGRSYETTTDCPNL--QPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QGQQ++L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCLIPQTV------SHRLRLYEREDHKGLMMELSEDCPSIQDR 115
+YP + W G S + L + V R+ L+E ++ +G +L +D PS+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 116 FHLS-EIRSLHVLEGCWVLYELPNYRGRQYLL 146
S ++ SL V G WV Y+ P YRG QY+L
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVL 165
Score = 56.2 bits (134), Expect = 1e-08
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 90 LRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQ 149
L L++ ED +G L DC ++ +R L +RS+ V G WV +E P+++G+Q++L
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 150 EYRRCQDW 157
+Y R W
Sbjct: 74 DYPRWSAW 81
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY---FSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G QY+L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|21389517 gammaN-crystallin [Homo sapiens]
Length = 182
Score = 95.1 bits (235), Expect = 3e-20
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 2 GKITFYEDRAFQGRSYETTTDCPNLQP--YFSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
GKIT YE + F G+ E DC N Q + +R NSI VESG W+ + P+++GQQ++L
Sbjct: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
Query: 60 RGEYPDYQQWMGLSDSIRSCCLIPQTVSH-RLRLYEREDHKGLMMELSEDCPSIQDR 115
G+YPD+ +W SD + SC + H RL ++E + G +E ED P +Q R
Sbjct: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
Score = 60.5 bits (145), Expect = 7e-10
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 87 SHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLL 146
S ++ LYE + G +E+ DC + QDR ++ + S+HV G WV + P++RG+Q++L
Sbjct: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
Query: 147 RPQEYRRCQDWGAMDAKAGSLRRV 170
+Y W + GS R V
Sbjct: 65 EHGDYPDFFRWNSHSDHMGSCRPV 88
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 86.3 bits (212), Expect = 1e-17
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 6/172 (3%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRGE 62
+I + + FQG S + FS S RV G W++Y+ N+ G QY+L G
Sbjct: 1416 QIHLFSEPQFQGHSQSFEETTSQIDDSFST-KSCRVSGGSWVVYDGENFTGNQYVLEEGH 1474
Query: 63 YPDYQQWMGLSD--SIRSCCLIPQTVSH-RLRLYEREDHKGLMMELSEDCPSIQDRFHLS 119
YP MG + +S I S + L+ERED KG +EL+ + +++ +
Sbjct: 1475 YPCLSA-MGCPPGATFKSLRFIDVEFSEPTIILFEREDFKGKKIELNAETVNLRSLGFNT 1533
Query: 120 EIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVV 171
+IRS+ V+ G WV YE +YRGRQ+LL P E ++ + GSLR V
Sbjct: 1534 QIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSGC-RQIGSLRPFV 1584
Score = 85.9 bits (211), Expect = 2e-17
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY--------------FSRCNSIRVESGCWMLYER 48
K+ YE F+G+ E T + F+ S++V G W+ YE+
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYEK 1278
Query: 49 PNYQGQQYLLRRGEYPDYQQWMGLSDSIRSCCLIPQTVS--HRLRLYERE-DHKGLMMEL 105
P + G QYLL GEY D++ W G + ++S I S H + E+ KG +++
Sbjct: 1279 PGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPILGDFSNAHMIMYSEKNFGSKGSSIDV 1338
Query: 106 SEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAG 165
++++ + + +S++VL G WV YE P++ G QY+L Y +DWG + K
Sbjct: 1339 LGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKIS 1398
Query: 166 SLRRV 170
S++ +
Sbjct: 1399 SVQPI 1403
Score = 79.3 bits (194), Expect = 2e-15
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 35 SIRVESGCWMLYERPNYQGQQYLLRRGEYPDYQQW---MGLSDSIRSCCLIPQTVSH--- 88
S++V G W++YE P +QG ++L GEYPD W S+R + + V
Sbjct: 1158 SMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMRPLKMGGRKVEFPTD 1217
Query: 89 -RLRLYEREDHKGLMMELSEDCPSI------------QDRFHLSEIRSLHVLEGCWVLYE 135
++ +YE+ +G +EL S D + + S+ VL G WV YE
Sbjct: 1218 PKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYE 1277
Query: 136 LPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVV 171
P + G QYLL EYR + WG + + SLR ++
Sbjct: 1278 KPGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPIL 1313
Score = 67.0 bits (162), Expect = 8e-12
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 2 GKITFYEDRAFQGRSYETTTDCPNLQPY-FSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
GK+ Y + + E +D + + S I+V GCW+LYE+PN++G L
Sbjct: 1022 GKVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVILIKVVRGCWILYEQPNFEGHSIPLEE 1081
Query: 61 GEYPDYQQWMGLSD-----------------SIRSCCLIPQTVSHRLRLYEREDHKGLMM 103
GE W G+ D SIR + VSH + L+ + G++
Sbjct: 1082 GELELSGLW-GIEDILERHEEAESDKPVVIGSIRHV-VQDYRVSH-IDLFTEPEGLGILS 1138
Query: 104 ELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAK 163
+D +Q + + S+ V G W++YE P ++G ++L P EY W A
Sbjct: 1139 SYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAY 1198
Query: 164 AGSLR 168
GS+R
Sbjct: 1199 IGSMR 1203
>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
sapiens]
Length = 1022
Score = 81.3 bits (199), Expect = 4e-16
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 8/176 (4%)
Query: 3 KITFYEDRAFQGRSYETTTDCPNLQPY------FSRCNSIRVESGCWMLYERPNYQGQQY 56
K+ YE F G++ E + ++ + F R SIRV G W+ YE+ +++GQQ+
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591
Query: 57 LLRRGEYPDYQQWMGLSDSIRSC-CLIPQTVSHRLRLYEREDHKGLMMEL-SEDCPSIQD 114
LL G++ D LS I S L + + L+E + G +++ +++ +++
Sbjct: 592 LLEEGDFEDSNACGALSSPILSFRYLQANFIESSVTLFESDLESGKFIDITNQEISDLEE 651
Query: 115 RFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRV 170
S+ RS+HV G WV Y+ + G QY+L +Y+ DWG + S+R +
Sbjct: 652 IGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPI 707
Score = 60.1 bits (144), Expect = 1e-09
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 4 ITFYEDRAFQGRSYETTT-DCPNLQP--YFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
+T +E G+ + T + +L+ + S+ SI V+SG W+ Y++ + G+QY+L +
Sbjct: 626 VTLFESDLESGKFIDITNQEISDLEEIGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEK 685
Query: 61 GEYPDYQQWMGLSD---SIRSCCLIPQTVS---HRLRLYEREDHKGLMMELSEDCPSIQD 114
G+Y + W G ++ SIR L P ++ H L+ + + +G ++ +E+ +
Sbjct: 686 GKYKCFFDWGGSNNIIMSIRPIQLEPLGINEPPHLLKAFSKPGFQGECIDFTEETSDLTS 745
Query: 115 RFHLSEIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRV 170
S VL GCW+LY + +L Y G +K SL+ +
Sbjct: 746 LMPCS----FKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTSCGCPASKVKSLKPI 797
Score = 54.7 bits (130), Expect = 4e-08
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 12 FQGRSY---ETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRGEYPDYQQ 68
FQG E T+D +L P S +V GCW+LY + + +L G Y D
Sbjct: 729 FQGECIDFTEETSDLTSLMPC-----SFKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTS 783
Query: 69 WMGLSDSIRSCCLIPQTVSH-RLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVL 127
+ ++S I + L+ E +G + L E S+ ++ +S+ V
Sbjct: 784 CGCPASKVKSLKPIDYVFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVK 843
Query: 128 EGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMD--AKAGSLR 168
G W+ YE N+ GRQ LLRP E +W A GSLR
Sbjct: 844 SGLWIAYEGSNFLGRQILLRPNE---IPNWTAFSRWKTIGSLR 883
Score = 51.2 bits (121), Expect = 4e-07
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 24 PNLQPY-FSRCNSIRVESGCWMLYERPNYQGQQYLLRRGE---YPDYQQWMGLSDSIRSC 79
PNL+ S+ S V+SG W+ Y N++GQ +L + L
Sbjct: 463 PNLEELNISKSVSFTVKSGVWLAYPDINFKGQATVLEEDHGLFEISTAEMKSLHPLQMGG 522
Query: 80 CLIPQTVSHRLRLYEREDHKGLMMELSEDCPSI----QDRFHLSEIRSLHVLEGCWVLYE 135
+ ++ ++ +YE+ G E SE S+ ++ I S+ V+ G WV YE
Sbjct: 523 LKVEMPMNLKVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYE 582
Query: 136 LPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLR 168
+++G+Q+LL ++ GA+ + S R
Sbjct: 583 KEHFKGQQFLLEEGDFEDSNACGALSSPILSFR 615
Score = 50.8 bits (120), Expect = 6e-07
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 36 IRVESGCWMLYERPNYQGQQYLLRRGEYPDYQQW-------------MGLSDSIRSCCLI 82
I+V GCW+LYE+P+++GQ+ +L GE + W +G + C I
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVLKDCSI 440
Query: 83 PQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGR 142
P+ + L+ + D + + P++++ ++S+ S V G W+ Y N++G+
Sbjct: 441 PE-----IELFPQSDPACCPVYIQRAVPNLEE-LNISKSVSFTVKSGVWLAYPDINFKGQ 494
Query: 143 QYLL 146
+L
Sbjct: 495 ATVL 498
Score = 39.3 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 124 LHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAK-------AGSLRRVV 171
+ V+ GCW+LYE P++RG++ +L E +DW + + GSL+RV+
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVL 435
>gi|4505819 phosphatidylinositol-5-phosphate 4-kinase, type II, beta
[Homo sapiens]
Length = 416
Score = 29.6 bits (65), Expect = 1.4
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 74 DSIRSCCLIPQTV-SHRLRLYEREDHKGLMM-------ELSEDCPSIQDRFHLSEIRSLH 125
D + + ++ + V SHRL ++ + D KG + E ++D P+ +D L+E + LH
Sbjct: 192 DGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLH 251
Query: 126 VLE 128
V E
Sbjct: 252 VGE 254
>gi|22027630 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 28.1 bits (61), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 88 HRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGC 130
H++ L EDH+ DCP Q F I ++H+L+ C
Sbjct: 141 HKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHI-NIHILKDC 182
>gi|4759254 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 28.1 bits (61), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 88 HRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGC 130
H++ L EDH+ DCP Q F I ++H+L+ C
Sbjct: 141 HKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHI-NIHILKDC 182
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 27.7 bits (60), Expect = 5.2
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 128 EGCWVLYELPNYRGR-QYLLRPQEYRRC 154
EGCWV Y L G +YL+ E R C
Sbjct: 668 EGCWVAYTLEQQDGMDRYLIYVDESREC 695
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 27.7 bits (60), Expect = 5.2
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 128 EGCWVLYELPNYRGR-QYLLRPQEYRRC 154
EGCWV Y L G +YL+ E R C
Sbjct: 668 EGCWVAYTLEQQDGMDRYLIYVDESREC 695
>gi|55741845 valyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
Length = 1063
Score = 27.3 bits (59), Expect = 6.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 143 QYLLRPQEYRRCQDWGAMDAKA 164
+YLL+ Q + RCQ+ GA AKA
Sbjct: 473 EYLLKNQWFVRCQEMGARAAKA 494
>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
Length = 1142
Score = 27.3 bits (59), Expect = 6.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 72 LSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSL 124
LS + C+ + +++ +Y +K +S+ C ++ DR LS I SL
Sbjct: 771 LSSLFNTICMSGEMLANFRNIYRLSQNKTCKKHISQSCWTVHDRTLLSVIDSL 823
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,980,425
Number of Sequences: 37866
Number of extensions: 307557
Number of successful extensions: 770
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 48
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.