Search of human proteins with 4502605

Search of human proteins with 4502605

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4502605 cholecystokinin preproprotein [Homo sapiens]
         (115 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4502605 cholecystokinin preproprotein [Homo sapiens]               233   2e-62
gi|4503923 gastrin preproprotein [Homo sapiens]                        35   0.017
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              32   0.083
gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|221139926 NHS-like 1 [Homo sapiens]                                 31   0.24 
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]            29   0.70 
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]             29   0.70 
gi|112382239 desmuslin isoform B [Homo sapiens]                        29   0.70 
gi|112382237 desmuslin isoform A [Homo sapiens]                        29   0.70 
gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]        29   0.92 
gi|153791244 hypothetical protein LOC55237 [Homo sapiens]              29   0.92 
gi|239743309 PREDICTED: similar to calcium-promoted Ras inactiva...    28   1.6  
gi|239743307 PREDICTED: similar to calcium-promoted Ras inactiva...    28   1.6  
gi|239508992 PREDICTED: similar to calcium-promoted Ras inactiva...    28   1.6  
gi|239508990 PREDICTED: similar to calcium-promoted Ras inactiva...    28   1.6  
gi|121114292 RAS p21 protein activator 4 isoform 2 [Homo sapiens]      28   1.6  
gi|121114294 RAS p21 protein activator 4 isoform 1 [Homo sapiens]      28   1.6  
gi|22027541 programmed cell death 7 [Homo sapiens]                     28   1.6  
gi|89264696 angiopoietin-like 4 protein isoform b precursor [Hom...    28   2.0  
gi|116812575 high glucose-regulated protein 8 [Homo sapiens]           28   2.0  
gi|22749213 hypothetical protein LOC160419 [Homo sapiens]              28   2.0  
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H...    27   3.5  
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H...    27   3.5  
gi|239751849 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    27   3.5  
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    27   3.5  
gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]           27   3.5  
gi|50428940 mediator complex subunit 25 [Homo sapiens]                 27   3.5  
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi...    27   3.5  
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]     27   4.5  

>gi|4502605 cholecystokinin preproprotein [Homo sapiens]
          Length = 115

 Score =  233 bits (594), Expect = 2e-62
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGA 60
           MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGA
Sbjct: 1   MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGA 60

Query: 61  LLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS 115
           LLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS
Sbjct: 61  LLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS 115


>gi|4503923 gastrin preproprotein [Homo sapiens]
          Length = 101

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 22/112 (19%)

Query: 5   VCLCVLMAVLAAGALTQPV------PPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHL 58
           +C+ VL+  LA  A ++         P  P G+G  R  E P  +    Q      R  L
Sbjct: 4   LCVYVLIFALALAAFSEASWKPRSQQPDAPLGTGANRDLELPWLE---QQGPASHHRRQL 60

Query: 59  GALLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEE 110
           G             P G   +V +           + +  GWMDFGRRSAE+
Sbjct: 61  G-------------PQGPPHLVADPSKKQGPWLEEEEEAYGWMDFGRRSAED 99


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 11   MAVLAAG-ALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQA 69
            M V  AG  L QP PP +P+ +G  R   A ++QL  ++ T      H  A +    + A
Sbjct: 1359 MGVATAGFGLVQPRPPLEPSPTGRHRGVRAVQQQLAYARAT-----GHAMAAMPSSQETA 1413

Query: 70   RKAPSGRM 77
               P G M
Sbjct: 1414 EAVPKGAM 1421


>gi|169211520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 312

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 19/51 (37%), Positives = 22/51 (43%)

Query: 19  LTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQA 69
           L +P  P    G GL RA  APR + R S  T          L A Y+Q A
Sbjct: 262 LQRPEKPLSQWGEGLGRARRAPRIETRASAATAAPLGCLFSRLFANYLQGA 312


>gi|221139926 NHS-like 1 [Homo sapiens]
          Length = 1606

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 22   PVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGRMSIVK 81
            P PP  P G+    A       ++ S R    S  +  ALL +  + +R   S RMS  +
Sbjct: 1383 PSPPVTPTGAAPSLASPKQVGSIQRSIRKSSTSSDNFKALLLK--KGSRSDTSARMSAAE 1440

Query: 82   NLQNLDP 88
             L+N DP
Sbjct: 1441 MLKNTDP 1447


>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 21/77 (27%), Positives = 31/77 (40%)

Query: 20  TQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGRMSI 79
           T  +PP     SGL RAE   R     S  T   +  HL     ++ +  RK P G   +
Sbjct: 851 TGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHLSPQALKWREYRRKNPLGPPGL 910

Query: 80  VKNLQNLDPSHRISDRD 96
             +L       R++ R+
Sbjct: 911 SGSLDRRSQEARLARRN 927


>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 21/77 (27%), Positives = 31/77 (40%)

Query: 20  TQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGRMSI 79
           T  +PP     SGL RAE   R     S  T   +  HL     ++ +  RK P G   +
Sbjct: 851 TGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHLSPQALKWREYRRKNPLGPPGL 910

Query: 80  VKNLQNLDPSHRISDRD 96
             +L       R++ R+
Sbjct: 911 SGSLDRRSQEARLARRN 927


>gi|112382239 desmuslin isoform B [Homo sapiens]
          Length = 1253

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 16  AGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLA------RYIQQA 69
           A +L Q +     A +  +   +A RR+LR  QR D E RA  G L A      R +Q+A
Sbjct: 64  ARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEA 123

Query: 70  RKAPSGRMSIVKNLQ----NLDPSHRISDRD 96
             A +   +++  LQ     LD +H    R+
Sbjct: 124 LGARAALEALLGRLQAERRGLDAAHERDVRE 154


>gi|112382237 desmuslin isoform A [Homo sapiens]
          Length = 1565

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 16  AGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLA------RYIQQA 69
           A +L Q +     A +  +   +A RR+LR  QR D E RA  G L A      R +Q+A
Sbjct: 64  ARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEA 123

Query: 70  RKAPSGRMSIVKNLQ----NLDPSHRISDRD 96
             A +   +++  LQ     LD +H    R+
Sbjct: 124 LGARAALEALLGRLQAERRGLDAAHERDVRE 154


>gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]
          Length = 732

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 20/60 (33%), Positives = 27/60 (45%)

Query: 12  AVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARK 71
           A  AA A   P P A  A +         +R+ RV+  + GES + L A   + IQQ  K
Sbjct: 51  AAAAAAAAPAPTPAASAAAAAATAGARRVQRRRRVNLDSLGESISRLTAPSPQTIQQTLK 110


>gi|153791244 hypothetical protein LOC55237 [Homo sapiens]
          Length = 702

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 26  ADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGRMSIV 80
           A P G+  +  E  P R+  + +    + + H G LL++ +  A     GRM ++
Sbjct: 589 APPVGASSEDVEGGPSREGALQEGATAQGQPHSGPLLSQPVVAAAGGRDGRMLVM 643


>gi|239743309 PREDICTED: similar to calcium-promoted Ras inactivator
           isoform 2 [Homo sapiens]
          Length = 731

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 321 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 364


>gi|239743307 PREDICTED: similar to calcium-promoted Ras inactivator
           isoform 1 [Homo sapiens]
          Length = 757

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 393 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 436


>gi|239508992 PREDICTED: similar to calcium-promoted Ras inactivator
           isoform 1 [Homo sapiens]
          Length = 731

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 321 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 364


>gi|239508990 PREDICTED: similar to calcium-promoted Ras inactivator
           isoform 2 [Homo sapiens]
          Length = 757

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 393 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 436


>gi|121114292 RAS p21 protein activator 4 isoform 2 [Homo sapiens]
          Length = 757

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 393 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 436


>gi|121114294 RAS p21 protein activator 4 isoform 1 [Homo sapiens]
          Length = 803

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 27  DPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           D   SGL R    P+ +  V +++    RAHLGALL+   +  R  P+
Sbjct: 393 DVGCSGLHR----PQTEAEVLEQSAQTLRAHLGALLSALSRSVRACPA 436


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 21  QPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGRMSIV 80
           QP+  A   G   +R E   RR+LR+ +R   E  A   A  AR +++ ++    R+  V
Sbjct: 224 QPLTQAAYVGEARRRLERVRRRRLRLRERA-REREAEREAEAARAVEREQEIDRWRVKCV 282

Query: 81  KNLQ 84
           + ++
Sbjct: 283 QEVE 286


>gi|89264696 angiopoietin-like 4 protein isoform b precursor [Homo
           sapiens]
          Length = 368

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 55  RAHLGALLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRR 106
           ++  G L  +++      P+ R  + +  Q +DP+H +S   + GW    RR
Sbjct: 141 QSQFGLLDHKHLDHEVAKPARRKRLPEMAQPVDPAHNVSRLHHGGWTVIQRR 192


>gi|116812575 high glucose-regulated protein 8 [Homo sapiens]
          Length = 579

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 11  MAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLG 59
           +A  + G  TQP+PP  P  + L   ++A +    V+ R  G    H G
Sbjct: 317 VAQASVGQQTQPLPPPPPQPAQLSVQQQAAQPTRWVAPRNRGSGFGHNG 365


>gi|22749213 hypothetical protein LOC160419 [Homo sapiens]
          Length = 414

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 25  PADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKA 72
           P +   SG+QRA +APR Q ++S   + ++R    A  A YI   R A
Sbjct: 297 PQNFPNSGMQRAVQAPRPQNKMSYHRNNKNR---NAENASYIHVQRDA 341


>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
           sapiens]
          Length = 1379

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 7   LCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYI 66
           L V+  +L AGA   P P  D A + LQ         L +++R   E +AHL  L AR  
Sbjct: 880 LAVMRGLLVAGASVAPSPAVDKAQAELQEL-------LTIAER--WEEKAHL-CLEAR-- 927

Query: 67  QQARKAPSGRMSIVKNLQNLDPSH 90
              +  P+   +I++  +N+ P H
Sbjct: 928 --QKHPPATLEAIIREAENI-PVH 948


>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
            sapiens]
          Length = 1560

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 7    LCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYI 66
            L V+  +L AGA   P P  D A + LQ         L +++R   E +AHL  L AR  
Sbjct: 947  LAVMRGLLVAGASVAPSPAVDKAQAELQEL-------LTIAER--WEEKAHL-CLEAR-- 994

Query: 67   QQARKAPSGRMSIVKNLQNLDPSH 90
               +  P+   +I++  +N+ P H
Sbjct: 995  --QKHPPATLEAIIREAENI-PVH 1015


>gi|239751849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 491

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 15  AAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPS 74
           AA     P PPA   G   QR   AP  Q  +   + G       A+L  +  + R    
Sbjct: 253 AADVTATPPPPAPRGGEKSQRKSNAPWGQDILPGGSGGHGEPRARAILNVHAPRGRWGAV 312

Query: 75  G------RMSIV---KNLQNLDPSHRISDRDYMGWMDFGRRSAEEY 111
           G      R+  V   + LQ L+     + R+  GW   GR S  +Y
Sbjct: 313 GGGEKGERLGPVGASQQLQRLESDSWENLREREGW---GRVSVSDY 355


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 10   LMAVLAAGALTQPVPPADPAGSG 32
            L+  L AG +  P PP  PAGSG
Sbjct: 2412 LIMRLQAGVMASPPPPGLPAGSG 2434



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 18  ALTQPVPPADPAGSGLQRAEEAPRR 42
           A T+P PPA P    LQ   +AP++
Sbjct: 973 APTKPAPPAPPPPQNLQPESDAPQQ 997


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
          Length = 2524

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 10   LMAVLAAGALTQPVPPADPAGSG 32
            L+  L AG +  P PP  PAGSG
Sbjct: 2474 LIMRLQAGVMASPPPPGLPAGSG 2496



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 18   ALTQPVPPADPAGSGLQRAEEAPRR 42
            A T+P PPA P    LQ   +AP++
Sbjct: 989  APTKPAPPAPPPPQNLQPESDAPQQ 1013


>gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]
          Length = 575

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 8/53 (15%)

Query: 18  ALTQPVPPADPAGSGLQRAEEAPRRQ---LRVSQRTDGE----SRAHLGALLA 63
           AL+ P PP  P  S  Q+A+EAP  Q   +   + +DGE    S A L AL++
Sbjct: 165 ALSPPPPPTRPV-SPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALIS 216


>gi|50428940 mediator complex subunit 25 [Homo sapiens]
          Length = 747

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 22  PVPPADPAGSGLQRAEEAPRRQLRVSQRTDGE-SRAHLGALLARYIQQARKAPSG-RMSI 79
           P+PPA P+G+ L  A + P   +    +  G  S A + A  A    + +KA  G R S 
Sbjct: 246 PLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSP 305

Query: 80  VKNLQNLDP 88
           +  LQ   P
Sbjct: 306 ITPLQQAAP 314


>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
           sapiens]
          Length = 280

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/16 (68%), Positives = 12/16 (75%)

Query: 16  AGALTQPVPPADPAGS 31
           A A +QP PPADP GS
Sbjct: 245 AAARSQPAPPADPDGS 260


>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
          Length = 221

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 24  PPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQARKAPSGR 76
           PP    G G  R   +PRR+ R   R+   SR+   +  +R   ++R     R
Sbjct: 106 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSR 158


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,489,833
Number of Sequences: 37866
Number of extensions: 179086
Number of successful extensions: 889
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 853
Number of HSP's gapped (non-prelim): 52
length of query: 115
length of database: 18,247,518
effective HSP length: 85
effective length of query: 30
effective length of database: 15,028,908
effective search space: 450867240
effective search space used: 450867240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.