Guide to the Human Genome
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Name: MYT1 Sequence: fasta or formatted (1121aa) NCBI GI: 17975763
Description:

myelin transcription factor 1

Referenced in:

Protein Composition and Structure
Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         85           3
 C cysteine            2.6         29           1
 D aspartate           5.4         61           3
 E glutamate          13.3        149          32
 F phenylalanine       1.9         21           1
 G glycine             6.8         76           1
 H histidine           2.9         33           2
 I isoleucine          2.9         33           2
 K lysine              6.7         75           2
 L leucine             7.6         85           2
 M methionine          1.6         18           2
 N asparagine          3.1         35           1
 P proline             6.8         76           2
 Q glutamine           4.0         45           2
 R arginine            4.5         50           2
 S serine             11.7        131           4
 T threonine           4.9         55           2
 V valine              3.7         42           2
 W tryptophan          0.3          3           1
 Y tyrosine            1.7         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin transcription factor 1 
MYT1L                 0.430   myelin transcription factor 1-like 
ST18                  0.364   suppression of tumorigenicity 18 
PELP1                 0.029   proline, glutamic acid and leucine rich protein 1 [...
RPGR                  0.029   retinitis pigmentosa GTPase regulator isoform C [Hom...
SLC24A1               0.029   solute carrier family 24 (sodium/potassium/calcium ex...
LOC728792             0.026   PREDICTED: hypothetical protein 
TTBK1                 0.026   tau tubulin kinase 1 
RANGAP1               0.025   Ran GTPase activating protein 1 
EIF5B                 0.024   eukaryotic translation initiation factor 5B 
RYR1                  0.024   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.024   skeletal muscle ryanodine receptor isoform 1 
YTHDC1                0.024   splicing factor YT521-B isoform 2 
YTHDC1                0.024   splicing factor YT521-B isoform 1 
CENPB                 0.023   centromere protein B 
WDR87                 0.023   NYD-SP11 protein 
CDC2L2                0.023   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.023   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SRCAP                 0.023   Snf2-related CBP activator protein 
MYST4                 0.023   MYST histone acetyltransferase (monocytic leukemia)...
TRIM44                0.022   DIPB protein 
DAXX                  0.022   death-domain associated protein isoform a 
DAXX                  0.022   death-domain associated protein isoform a 
DAXX                  0.022   death-domain associated protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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