Search of human proteins with 169213439

Search of human proteins with 169213439

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
         (338 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo sap...   689   0.0  
gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo sap...   689   0.0  
gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo sap...   689   0.0  
gi|119395716 forkhead box C1 [Homo sapiens]                            46   5e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    43   4e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     42   6e-04
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             42   0.001
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    41   0.002
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    41   0.002
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ...    41   0.002
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         41   0.002
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    40   0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni...    40   0.003
gi|31324577 molecule interacting with Rab13 [Homo sapiens]             40   0.003
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]    40   0.004
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]                  39   0.007
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]            39   0.009
gi|55750053 atrophin-1 [Homo sapiens]                                  39   0.009
gi|55750041 atrophin-1 [Homo sapiens]                                  39   0.009
gi|168229174 RNA binding motif protein 27 [Homo sapiens]               39   0.009
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    39   0.009
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]              38   0.015
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]              38   0.015
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]              38   0.015
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]              38   0.015
gi|113414915 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]              38   0.015
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]              38   0.015
gi|239741942 PREDICTED: hypothetical protein [Homo sapiens]            38   0.015
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]             37   0.019

>gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score =  689 bits (1779), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60
           MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT
Sbjct: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60

Query: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120
           PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG
Sbjct: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120

Query: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180
           YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ
Sbjct: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180

Query: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240
           TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT
Sbjct: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240

Query: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300
           LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG
Sbjct: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300

Query: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338
           SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI
Sbjct: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338


>gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score =  689 bits (1779), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60
           MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT
Sbjct: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60

Query: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120
           PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG
Sbjct: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120

Query: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180
           YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ
Sbjct: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180

Query: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240
           TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT
Sbjct: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240

Query: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300
           LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG
Sbjct: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300

Query: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338
           SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI
Sbjct: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338


>gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo
           sapiens]
          Length = 338

 Score =  689 bits (1779), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60
           MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT
Sbjct: 1   MLEWFRTADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRT 60

Query: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120
           PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG
Sbjct: 61  PGGSGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAG 120

Query: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180
           YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ
Sbjct: 121 YLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQ 180

Query: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240
           TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT
Sbjct: 181 TGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKT 240

Query: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300
           LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG
Sbjct: 241 LLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEG 300

Query: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338
           SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI
Sbjct: 301 SQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI 338


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 14/161 (8%)

Query: 18  PRTAPKAARDV---NGSAPQTAQA-SPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQA 73
           P+  P   +D+   NG+ P   Q  SP +  GSGSA  +  + S  +   S  +GS+P  
Sbjct: 216 PQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPG 275

Query: 74  A-PQARRTVPPSLAGSFSLPPTPDSRFADWRTTGG------VRKAAGLGASVAGYLEHNL 126
           + P AR   P SL G+ S PP P         + G      +    G   S A  L   L
Sbjct: 276 SLPSAR---PLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGL 332

Query: 127 RAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASA 167
            A      + G  PP    A +P    ++S P +  +SA +
Sbjct: 333 LASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGS 373


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 64/251 (25%), Positives = 91/251 (36%), Gaps = 29/251 (11%)

Query: 16  SAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAP 75
           S P   P      + SAP + Q  P  PA   + P  AP  S+ TP         P  AP
Sbjct: 334 SPPLATPLPLAPPSPSAPPSLQTLPSPPA---TPPSQAPP-SMTTP---------PMQAP 380

Query: 76  QARRTVPP-----SLAG-SFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAH 129
            + +T+PP     SL   S   PP+P +  +   TT     + G     A +    +   
Sbjct: 381 PSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATT-----SLGSPTLQATHSFLTMSPR 435

Query: 130 QLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQ 189
           Q +      + P +    +PPL+   SLP +PP   S  P +V                 
Sbjct: 436 QTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSP-AVSPLSSPLTIHPLQALSS 494

Query: 190 VLNLVPGEPERTLEQEEKEKLVSEAPP----PPGAMQSLRPEQTRGLLEPERTKTLLPRE 245
           + +  P  P  +L     E   S APP    PP ++ +   E    L  P       P  
Sbjct: 495 LASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLT 554

Query: 246 SRAWEKPPHPA 256
           +   E PP PA
Sbjct: 555 TPHLETPPCPA 565



 Score = 32.7 bits (73), Expect = 0.47
 Identities = 58/238 (24%), Positives = 76/238 (31%), Gaps = 44/238 (18%)

Query: 18  PRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQA 77
           P  AP          P +  ASP     +   PR+ PL+                AAP  
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL----------------AAPPL 766

Query: 78  RRTVPPSLAGSFSLPP--TPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQ 135
           +  VPPS   S  + P   P  +      T  ++      AS  G    +  A  L M  
Sbjct: 767 Q--VPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA-SLPMSP 823

Query: 136 LGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVP 195
           L T PP        PL     +P +PPAS +   Q+ RR        S  G    L L P
Sbjct: 824 LATPPPQAPPVLAAPLL---QVPPSPPASPTL--QAPRRPPTPGPDTSVSGPRLTLALAP 878

Query: 196 GEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTKTLLPRESRAWEKPP 253
           G                  PPPP +           L     + T  P E R ++  P
Sbjct: 879 G------------------PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGP 918



 Score = 32.0 bits (71), Expect = 0.81
 Identities = 42/155 (27%), Positives = 56/155 (36%), Gaps = 19/155 (12%)

Query: 21  APKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQ-NGSAPQAAPQARR 79
           +P A+  V+ SA   +QA P   A     P   P     +P  +       P AAP  + 
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ- 736

Query: 80  TVPPSLAGSFSLPP--TPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLG 137
            VPPS   S  + P  TP  R         ++      AS             L M  L 
Sbjct: 737 -VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPAS-------------LPMSPLA 782

Query: 138 TTPP-CNHAAGTPPLRLIHSLPHAPPASASAQPQS 171
             PP    A  TPPL+ + S P + P  A   P +
Sbjct: 783 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 14  TDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQA 73
           T  APR  P    D + S P+   A    P      P  +P  ++  P  +G + SA  +
Sbjct: 851 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPP---PPPSRSPSSTLSGPDLAGHSSSA-TS 906

Query: 74  APQARRTVPPSLAGSFSLPPTPDSRFA 100
            P+  R       G  +  P PD+  A
Sbjct: 907 TPEELRGYDSGPEGGAAASPPPDAELA 933


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 82/308 (26%), Positives = 105/308 (34%), Gaps = 83/308 (26%)

Query: 17  APRTAPKAARDVNGSAPQTAQASPDSPA-----GSGSAPRIAPLISIRTPG-GSGQNG-- 68
           APR AP AA     +AP    A P  PA         APR A   +   P  G  Q G  
Sbjct: 114 APRGAPAAAA---AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPR 170

Query: 69  ---SAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHN 125
              +AP AAP      PP++A     PP             G R+A     +        
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVA-----PP------------AGPRRAPPPAVAA------- 206

Query: 126 LRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPP------ASASAQPQSVRRQLCRA 179
            R   L        PP       P        P  PP      A  +A+P S+ R++ R 
Sbjct: 207 -REPPLPPPPQPPAPPQQQQPPPPQ-------PQPPPEGGAVRAGGAARPVSL-REVVRY 257

Query: 180 QTGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPERTK 239
             GSG  G +   L  G  +  LE+E                        RG LE  R  
Sbjct: 258 LGGSGGAGGR---LTRGRVQGLLEEE---------------------AAARGRLERTRLG 293

Query: 240 TL-LPRESRAWEKPP----HPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEE 294
            L LPR  R    PP     P+ +K      V     + D+ +   +E  +S E S V E
Sbjct: 294 ALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEEDDVS-EGSEVPE 352

Query: 295 DDESEGSQ 302
            D   G+Q
Sbjct: 353 SDRPAGAQ 360


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 58/216 (26%), Positives = 80/216 (37%), Gaps = 48/216 (22%)

Query: 105 TGGVRKAAGLGASVAGYLE------HNLRAHQLEMDQLGTTPP---CNHAAGTPPL---- 151
           TGG R ++GLG S   +LE        +RA Q   +  G  PP    + AAG PP     
Sbjct: 3   TGGYRTSSGLGGSTTDFLEEWKAKREKMRAKQ---NPPGPAPPGGGSSDAAGKPPAGALG 59

Query: 152 --------RLIHSLP-HAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTL 202
                    L ++LP  AP A A   P  V   +         G   +    PG P R+ 
Sbjct: 60  TPAAAAANELNNNLPGGAPAAPAVPGPGGVNCAV---------GSAMLTRAAPG-PRRS- 108

Query: 203 EQEEKEKLVSEAPPP----------PGAMQSLRPEQTRGLLEPERTKTLLPRESRAWEKP 252
           E E      S APPP          P   +S  P   +G  + E+ K    R S      
Sbjct: 109 EDEPPAASASAAPPPQRDEEEPDGVPEKGKSSGPSARKGKGQIEKRKLREKRRSTGVVNI 168

Query: 253 PHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQE 288
           P   C  ++E  E G    +   +D  +Q+  +  E
Sbjct: 169 PAAECLDEYEDDEAG--QKERKREDAITQQNTIQNE 202


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 71/303 (23%), Positives = 98/303 (32%), Gaps = 46/303 (15%)

Query: 33  PQTAQASPDSPAGSGSAPRIAP------LISIRTPGGSGQN-------GSAPQAAPQARR 79
           P   Q  P  P+  G A   +P       + +  PGG+  +       G  PQ       
Sbjct: 482 PTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPG 541

Query: 80  TVPPSLAGS-------FSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRA-- 128
           + PP  AG        F  PP          +T       AAG GA+ AG      R   
Sbjct: 542 SGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPA 601

Query: 129 ----HQLEMDQLGTTPPCNHAAGTP--------PLRLIHSLPHAPPASASAQPQSVRRQL 176
               H LE  + G     + +A  P         L  +H      P SA   P       
Sbjct: 602 PHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPH 661

Query: 177 CRAQTGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPE 236
                      P  L L+P +P+    +          PPPP    +  P   RGLL P 
Sbjct: 662 HHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH-RGLLSPG 720

Query: 237 RTKTLLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDD 296
            T    P E  + ++        + E  EV    H   E +   +E G   +    EED+
Sbjct: 721 GTSCCYPSEDSSEDE------DDEEEEQEVDVEGHKPPEGE--EEEEGRDPD-DDEEEDE 771

Query: 297 ESE 299
           E+E
Sbjct: 772 ETE 774


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 71/303 (23%), Positives = 98/303 (32%), Gaps = 46/303 (15%)

Query: 33  PQTAQASPDSPAGSGSAPRIAP------LISIRTPGGSGQN-------GSAPQAAPQARR 79
           P   Q  P  P+  G A   +P       + +  PGG+  +       G  PQ       
Sbjct: 482 PTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPG 541

Query: 80  TVPPSLAGS-------FSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRA-- 128
           + PP  AG        F  PP          +T       AAG GA+ AG      R   
Sbjct: 542 SGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPA 601

Query: 129 ----HQLEMDQLGTTPPCNHAAGTP--------PLRLIHSLPHAPPASASAQPQSVRRQL 176
               H LE  + G     + +A  P         L  +H      P SA   P       
Sbjct: 602 PHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPH 661

Query: 177 CRAQTGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPE 236
                      P  L L+P +P+    +          PPPP    +  P   RGLL P 
Sbjct: 662 HHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH-RGLLSPG 720

Query: 237 RTKTLLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDD 296
            T    P E  + ++        + E  EV    H   E +   +E G   +    EED+
Sbjct: 721 GTSCCYPSEDSSEDE------DDEEEEQEVDVEGHKPPEGE--EEEEGRDPD-DDEEEDE 771

Query: 297 ESE 299
           E+E
Sbjct: 772 ETE 774


>gi|112821681 G protein-regulated inducer of neurite outgrowth 1 [Homo
            sapiens]
          Length = 1008

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 26/183 (14%)

Query: 21   APKAARDVNGSAPQTAQASPDSP-------AGSGSAPRIAPLISIRTPGGSGQNGSAPQA 73
            +P + +D  G +  + QA+P +P       AG   +   A   S+ T G      +AP A
Sbjct: 827  SPMSPQDGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVAT-GPMTPQAAAPPA 885

Query: 74   APQARRTVPPSLAGSFSLPPTP---------DSRFADWRTTGGVRKAAGLGASVAGYLEH 124
             P+ R     +LA + + PP P         D +   W   G   +   LG ++  +LE 
Sbjct: 886  FPEVRVRPGSALAAAVA-PPEPAEPVRDVSWDEKGMTWEVYGAAMEVEVLGMAIQKHLER 944

Query: 125  NLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLP-----HAPPASASAQPQSVRRQLCRA 179
             +  H     Q    PP    AG      + + P       PP    A  QSVRR  C +
Sbjct: 945  QIEEHG---RQGAPAPPPAARAGPGRSGSVRTAPPDGAAKRPPGLFRALLQSVRRPRCCS 1001

Query: 180  QTG 182
            + G
Sbjct: 1002 RAG 1004


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 63/252 (25%), Positives = 83/252 (32%), Gaps = 42/252 (16%)

Query: 8   ADSSRQTDSAPRTAPKAARDVNGSAPQTAQAS-PDSPA-----------GSGSAPRIAPL 55
           + S R +   PR  P   R + G  PQT + S P +PA                P +  L
Sbjct: 356 SSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSL 415

Query: 56  ISIRTPGGSGQNGSAPQAAPQARRTVPPSL-AGSFSLPPTPDSRFADWRTTGGVRKAAGL 114
           + + TPG S  +GS       A    PP+L +GS   P  P        T+G +    G 
Sbjct: 416 LGLPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGA 475

Query: 115 GASVAGYLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASA------- 167
            A  A      + +  L+    G       A   PPL    + P   P    A       
Sbjct: 476 PAPPAASKAPVVPSPVLQSPSEGLGMGAGPACPLPPLAGGEAFPFPSPEQGLALSGAGFP 535

Query: 168 -------------QPQS---VRRQLCRAQTGSGWGGPQVLNLV-----PGEPERTLEQEE 206
                        QP     +   L    TG G G P    L+     PG P    E E 
Sbjct: 536 GMLGALPLPLSLGQPPPSPLLNHSLFGVLTGGG-GQPPPEPLLPPPGGPGPPLAPGEPEG 594

Query: 207 KEKLVSEAPPPP 218
              LV+   PPP
Sbjct: 595 PSLLVASLLPPP 606



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 17/155 (10%)

Query: 16  SAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRI-APLISIRTPGGSGQNGSAPQAA 74
           SAP+  P  +     +    A +   +P+ SG  P++ +PL+     G      S+P A 
Sbjct: 699 SAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPGAL 758

Query: 75  PQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMD 134
           P   +   P L+G   L   P          GG        +S    L  +L+    E  
Sbjct: 759 PSLLQPPGPLLSGQLGLQLLPG---------GGAPPPLSEASSPLACLLQSLQIPP-EQP 808

Query: 135 QLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQP 169
           +    PP + A+   P       P  PP SA A P
Sbjct: 809 EAPCLPPESPASALEP------EPARPPLSALAPP 837


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 71/303 (23%), Positives = 98/303 (32%), Gaps = 46/303 (15%)

Query: 33  PQTAQASPDSPAGSGSAPRIAP------LISIRTPGGSGQN-------GSAPQAAPQARR 79
           P   Q  P  P+  G A   +P       + +  PGG+  +       G  PQ       
Sbjct: 482 PTYLQPPPQPPSALGCALGESPALLRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGPG 541

Query: 80  TVPPSLAGS-------FSLPPTPDSRFADWRTTGGVRK--AAGLGASVAGYLEHNLRA-- 128
           + PP  AG        F  PP          +T       AAG GA+ AG      R   
Sbjct: 542 SGPPPPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPA 601

Query: 129 ----HQLEMDQLGTTPPCNHAAGTP--------PLRLIHSLPHAPPASASAQPQSVRRQL 176
               H LE  + G     + +A  P         L  +H      P SA   P       
Sbjct: 602 PHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPH 661

Query: 177 CRAQTGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQTRGLLEPE 236
                      P  L L+P +P+    +          PPPP    +  P   RGLL P 
Sbjct: 662 HHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHH-RGLLSPG 720

Query: 237 RTKTLLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDD 296
            T    P E  + ++        + E  EV    H   E +   +E G   +    EED+
Sbjct: 721 GTSCSYPSEDSSEDE------DDEEEEQEVDVEGHKPPEGE--EEEEGRDPD-DDEEEDE 771

Query: 297 ESE 299
           E+E
Sbjct: 772 ETE 774


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 52/191 (27%), Positives = 64/191 (33%), Gaps = 43/191 (22%)

Query: 14   TDSAPRTAPKA--ARDVNGSAPQTAQASPDSPAG--SGSAPRIAPLISIRTPGG--SGQN 67
            T +A   +PK   A      AP T  A+P SP G  +  +P+ AP     TP     G  
Sbjct: 1197 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPA 1256

Query: 68   GSAPQAAPQARRTVPPSLAGSFSLPP----------TPDSRFADWRTTGGVRKAAGLGAS 117
               P+ AP      PPSL G  + PP          TP S        GG   +   GA 
Sbjct: 1257 TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS------PKGGPATSPPKGAP 1310

Query: 118  VAGYLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLC 177
                                T P    + GTPP +   + P   P S    P        
Sbjct: 1311 T---------------PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP------TL 1349

Query: 178  RAQTGSGWGGP 188
             A T S  GGP
Sbjct: 1350 PATTPSSKGGP 1360



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 56/227 (24%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 14   TDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRI--APLISIRTPGG--SGQNGS 69
            T  +P+ +P AA  +   AP T  A+  SP G  + P +  AP     TP     G    
Sbjct: 1039 TPPSPKGSP-AATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097

Query: 70   APQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRT----TGGVRKAAGLGASVAGYLEHN 125
            +P+ AP      PPS  G  + PP   +      T     GG+      GA         
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT------ 1151

Query: 126  LRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGW 185
                        T P       TPP       P   P + +A P S +  L    T S  
Sbjct: 1152 ---------PAATPPSPKGGLATPP-------PKGAPTTPAATPPSPKGGLA---TPSPK 1192

Query: 186  GGPQVLNLVPGEPERTL-EQEEKEKLVSEAPPPPGAMQSLRPEQTRG 231
            G P      P  P+  L     K    + A  PP     L     +G
Sbjct: 1193 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG 1239



 Score = 35.4 bits (80), Expect = 0.073
 Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 35/219 (15%)

Query: 7    TADSSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGS--APRIAPLISIRTPGG- 63
            T+ S ++  + P      A      AP    A+P SP G  +  +P+ AP     TP   
Sbjct: 914  TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973

Query: 64   -SGQNGSAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYL 122
              G    +P+ AP      PPS  G    P TP  + A   T   V   +  G+  A   
Sbjct: 974  KGGPATPSPKGAPTPPAATPPSPKGG---PATPSPKGAP--TPPAVTPPSPKGSPAA--- 1025

Query: 123  EHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQT- 181
                              P    A TPP     + P +P  S +A P         A T 
Sbjct: 1026 -----------------TPFPKGASTPPA----ATPPSPKGSPAATPLPKGAPTTPAATL 1064

Query: 182  GSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGA 220
             S  GGP   +L  G P          K     P P GA
Sbjct: 1065 PSPKGGPATPSL-KGAPTPPAATPPSPKGGPATPSPKGA 1102



 Score = 32.7 bits (73), Expect = 0.47
 Identities = 54/215 (25%), Positives = 69/215 (32%), Gaps = 43/215 (20%)

Query: 14   TDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPR-----IAPLISIRTPGGSGQNG 68
            T  +P+  P  A      AP    A+P SP G  + P        P ++  +P GS    
Sbjct: 969  TPPSPKGGP--ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAAT 1026

Query: 69   SAPQAAPQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRA 128
              P+ A       PPS  GS +  P P               AA L +   G    +L+ 
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLPKG--------APTTPAATLPSPKGGPATPSLKG 1078

Query: 129  HQLEMDQLGTTPPCNHAAGTPPLRL---IHSLPHAPPASASAQPQSVRRQLCRAQTGSGW 185
                      TPP    A TPP          P   P   +A P S +  L    T    
Sbjct: 1079 --------APTPP----AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA---TPPHK 1123

Query: 186  GGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGA 220
            G P      P  P+  L            PPP GA
Sbjct: 1124 GAPTTPAATPPSPKGGL----------ATPPPKGA 1148


>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
          Length = 863

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 73/303 (24%), Positives = 109/303 (35%), Gaps = 50/303 (16%)

Query: 25  ARDVNGSAPQT----------AQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAA 74
           A+DV G  P +           +ASP++     + PR+        PG   +  S P   
Sbjct: 249 AKDVPGGGPSSSAPAGAEADGPKASPEARPQIPTKPRV--------PGKLQELASPPAGR 300

Query: 75  PQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMD 134
           P    T  P  A   + P  P  R         + + AG  + V G      R H+L + 
Sbjct: 301 P----TPAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNG------RLHELPVP 350

Query: 135 QLGTTPPCNHAAGTPPLR-------LIHSLPH-----APPASASAQPQSVRRQLCRAQTG 182
           +   TP    + GTP  R       L+ + P       PP+S+   P    RQ+    T 
Sbjct: 351 KPRGTP--KPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGPPSQDSRQVENGGT- 407

Query: 183 SGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSL---RPEQTRGLLEPERTK 239
                P     +  +P    E+EE++K   EAP  P    S     PE T   L P    
Sbjct: 408 EEVAQPSPTASLESKPYNPFEEEEEDK-EEEAPAAPSLATSPALGHPESTPKSLHP--WY 464

Query: 240 TLLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESE 299
            + P  S   +K P P        + + AS     E   ++    LS E  S E   ++ 
Sbjct: 465 GITPTSSPKTKKRPAPRAPSA-SPLALHASRLSHSEPPSATPSPALSVESLSSESASQTA 523

Query: 300 GSQ 302
           G++
Sbjct: 524 GAE 526


>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
          Length = 753

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 63/234 (26%), Positives = 85/234 (36%), Gaps = 66/234 (28%)

Query: 12  RQTDSAPRTAPKAARDVNGSAPQTAQASPDSPA-----GSGSAPRIAPLISIRTPGGSGQ 66
           R TDS    +P      NGS P  +   P SPA      SG  P  + L +  TPG +G 
Sbjct: 290 RSTDSEVSQSPAK----NGSKPVHSNQHPQSPAVPPTYPSGPPPAASALST--TPGNNGV 343

Query: 67  NGSA-------PQA-----------APQARRTVPPSLAGSFSLPPTPDSRFADWRTTGGV 108
              A       P+A           AP A+   PP+ +G  +  P P S     + +GG 
Sbjct: 344 PAPAAPPSALGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPS----VQPSGGG 399

Query: 109 RKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSL----------- 157
              +G G S +     N  A      Q G T   +  A +P    + S            
Sbjct: 400 GGGSGGGGSSS---SSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALG 456

Query: 158 ----PHAPPASASAQPQSVRRQLCRAQTGSGW---------GGPQVLNLVPGEP 198
               PH PP S S +P +       A TG+G          GGP +L  +P  P
Sbjct: 457 PPSGPHNPPPSTSKEPSAA------APTGAGGVAPGSGNNSGGPSLLVPLPVNP 504


>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
          Length = 1499

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 52/205 (25%), Positives = 69/205 (33%), Gaps = 42/205 (20%)

Query: 48  SAPRIAPLISIRTPGGSGQNGSAPQAAPQARRT-VPPSLAGSFSLPPTPDSRFADWRTTG 106
           +AP++ P  + + P        AP   P   R   P    G   +P  P S+F    TT 
Sbjct: 187 AAPQLGPGQTTQLPLSESSVPGAPHGPPPGLRPDAPGGGGGGGGVPGKPPSQFVYVFTTH 246

Query: 107 GVRKAA-----GLGASVAGYLEHNLRAHQLEMDQLGTTPPCNH-------AAGTPPLRLI 154
               AA     G   S+  Y + N+   + ++DQ    PP          +AGTP  +  
Sbjct: 247 LANTAAEAVLQGRADSILAYHQQNVP--RAKLDQAPKVPPTPEPLPLSTPSAGTPQSQPP 304

Query: 155 HSLPHAPPASASAQP-------------QSVRRQLCRAQTGSGWGGPQVLNLVPGEPERT 201
              P  PPA  SA P                   +  A TG G GG       P  P  T
Sbjct: 305 PLPPPPPPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGGGTGGTH-----PNTPTAT 359

Query: 202 LEQEEKEKLVSEAPPPPGAMQSLRP 226
                     +  P PPG   S  P
Sbjct: 360 ---------TANNPLPPGGDPSSAP 375


>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 2/101 (1%)

Query: 17  APRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAP- 75
           APR  P AAR    +A Q  + SP  P G G     +PL     P G+    +AP   P 
Sbjct: 59  APRERPAAARLSALAAAQPRRRSP-GPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPL 117

Query: 76  QARRTVPPSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGA 116
            AR + PP    S  +P    S  A W   G    A  L A
Sbjct: 118 PARPSSPPPSPPSPPVPTAQSSLPAPWPPQGPRSPAPSLRA 158


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 59/235 (25%), Positives = 81/235 (34%), Gaps = 50/235 (21%)

Query: 16  SAPRTAPK---AARDVNGS------APQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQ 66
           S P   PK   AA  V G        P T   S  S   SG+ P   P     TP G G 
Sbjct: 229 SGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPT----TPVGGGN 284

Query: 67  NGSAPQAA--PQARRTVPPSLA--------------GSFSLPPTPDSRFADWRTTGGVRK 110
             SAP  A  P     +PP  A              G+  LP    S  A  +  GG+  
Sbjct: 285 LPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 111 AAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQ 170
               G ++A    H+L             PP + +A  PP+R  +S   +  A+AS+   
Sbjct: 345 GPEKGPTLAPS-PHSL-------------PPASSSAPAPPMRFPYSSSSSSSAAASSSSS 390

Query: 171 SVRRQLCRAQTGS-------GWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPP 218
           S                    +  P  L++    P+ T      + + S+ PPPP
Sbjct: 391 SSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPP 445


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 59/235 (25%), Positives = 81/235 (34%), Gaps = 50/235 (21%)

Query: 16  SAPRTAPK---AARDVNGS------APQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQ 66
           S P   PK   AA  V G        P T   S  S   SG+ P   P     TP G G 
Sbjct: 229 SGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPT----TPVGGGN 284

Query: 67  NGSAPQAA--PQARRTVPPSLA--------------GSFSLPPTPDSRFADWRTTGGVRK 110
             SAP  A  P     +PP  A              G+  LP    S  A  +  GG+  
Sbjct: 285 LPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 111 AAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQ 170
               G ++A    H+L             PP + +A  PP+R  +S   +  A+AS+   
Sbjct: 345 GPEKGPTLAPS-PHSL-------------PPASSSAPAPPMRFPYSSSSSSSAAASSSSS 390

Query: 171 SVRRQLCRAQTGS-------GWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPP 218
           S                    +  P  L++    P+ T      + + S+ PPPP
Sbjct: 391 SSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPP 445


>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
          Length = 1060

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 69/273 (25%), Positives = 88/273 (32%), Gaps = 66/273 (24%)

Query: 33  PQTAQASPDSPA-GSGSAPRIAPLISIRTPG-GSGQNGSAPQAAPQARRTVPPSLAGSFS 90
           P      P  P  G G  P   P      PG G G   S     PQ     PPS+     
Sbjct: 327 PPPGMLMPPMPGPGPGPGPGPGP-----GPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIP 381

Query: 91  LPPTPDSRFADWRT---TGGVRKAAGLGASVAGYLEHNL------------RAH---QLE 132
            PP   S   + R    T  V   A +G  +   L  NL            R H     E
Sbjct: 382 RPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASE 441

Query: 133 MDQLGTTPPCNHAAGTPPLRLIHSL------------------------PHAPPASASAQ 168
             QLGT PP   A   PP  L+ S                         P AP  ++S +
Sbjct: 442 RLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEPDGYNPEAPSITSSGR 501

Query: 169 PQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPPPPGAMQSLRPEQ 228
            Q  R+   R QT      P ++ L  G+ +  +       ++   PP P    S+    
Sbjct: 502 SQ-YRQFFSRTQTQR----PNLIGLTSGDMD--VNPRAANIVIQTEPPVP---VSINSNI 551

Query: 229 TRGLLEPERTKTLLPRESRAWEKPPHPACTKDW 261
           TR +LEP+  K       RA      P   K W
Sbjct: 552 TRVVLEPDSRK-------RAMSGLEGPLTKKPW 577


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 52/227 (22%), Positives = 85/227 (37%), Gaps = 31/227 (13%)

Query: 15  DSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTP--GGSGQNGSAPQ 72
           +  P  +P  A +     P +   SP   + S +A  ++P  +   P  GG G+ G A  
Sbjct: 736 EQGPTVSPAPADE-----PSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRPGRAGA 790

Query: 73  AAPQARRTVPPSLAGSFSLPPTPDSRFADW--RTTGGVRKAAGLGASVAGYLEHNLRAHQ 130
              +A  + PP       LPP P +   D   R   G+    G     +   + + R  Q
Sbjct: 791 LKAEAGPSAPPRALEGLRLPPMPWNVPPDLSPRVVDGIEDGCG-----SDQPKFSFRVGQ 845

Query: 131 LEMDQLGTTPPCNHAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQV 190
                  + P C+ +    P   + ++PH P  + +       RQ     +       QV
Sbjct: 846 -------SGPECSSSPSPGPESGLLTVPHGPSEARNTDTLDKLRQAVTELS------EQV 892

Query: 191 LNLVPGEPERTLEQEEKEKLV--SEAPPPPGAMQSLRPEQTRGLLEP 235
           L +  G   ++L Q  +  L    E P P  + +   P  T GLL+P
Sbjct: 893 LQMREG--LQSLRQAVQLVLAPHREGPCPRASGEGPCPASTSGLLQP 937


>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2852

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1564 HGSLPVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1623

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1624 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1674

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1675 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1730

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1731 STRPSQLLSGLPP 1743


>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2924

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1636 HGSLPVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1695

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1696 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1746

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1747 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1802

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1803 STRPSQLLSGLPP 1815


>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1564 HGSLPVRTTPLQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1623

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1624 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1674

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1675 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1730

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1731 STRPSQLLSGLPP 1743


>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1636 HGSLPVRTTPLQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1695

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1696 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1746

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1747 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1802

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1803 STRPSQLLSGLPP 1815


>gi|113414915 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 28/151 (18%)

Query: 21  APKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARRT 80
           AP   R +  S P  A A+   PAGS       P+ S R  GGS             RR 
Sbjct: 27  APGVLRRLTPSCPNPASATGGGPAGSRDGGAQGPVSSGRIQGGS-------------RRP 73

Query: 81  VP--PSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGT 138
           +P  P    S  +PP P  R   W +  G   A   G  V   L            +L +
Sbjct: 74  LPAGPHPGLSAEVPPVPSRR---WLSGRGKAGAVLAGTGVYALLPE-------AGSRLCS 123

Query: 139 TPPCNHAAGTPPLRLIHSLP-HAPPASASAQ 168
            P     A TP  R + SLP HAP      Q
Sbjct: 124 LP--GFCAATPHPRRLSSLPLHAPAGQGELQ 152


>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
          Length = 2852

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1564 HGSLPVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1623

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1624 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1674

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1675 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1730

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1731 STRPSQLLSGLPP 1743


>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
          Length = 2924

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 50/193 (25%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 29   NGSAP-QTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSA--PQAAPQARRT-VP-P 83
            +GS P +T    P   A   S P  +P    R+P  SG + +   P       RT VP P
Sbjct: 1636 HGSLPVRTTPPQPSLTASPSSRPVASPGAISRSPTSSGSHKAVLTPAVTKVISRTGVPQP 1695

Query: 84   SLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGTTPPCN 143
            + A S S P TP +        G   +   +       LE  L     E  + G + P  
Sbjct: 1696 TQAQSASSPSTPLT------VAGTAAEQVPVSPLATRSLEIVLST---EKGEAGHSQPMG 1746

Query: 144  HAAGTPPLRLIHSLPHAPPASASAQPQSVRRQLCRAQTGSGWGGPQVLNLVPGEPERTLE 203
              A   P    H LP APP  A     + R      +T +        + +   P  +LE
Sbjct: 1747 SPASPQP----HPLPSAPPRPAQHTTMATRSPALPPETPAAASLSTATDGLAATPFMSLE 1802

Query: 204  QEEKEKLVSEAPP 216
                 +L+S  PP
Sbjct: 1803 STRPSQLLSGLPP 1815


>gi|239741942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 28/151 (18%)

Query: 21  APKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARRT 80
           AP   R +  S P  A A+   PAGS       P+ S R  GGS             RR 
Sbjct: 27  APGVLRRLTPSCPNPASATGGGPAGSRDGGAQGPVSSGRIQGGS-------------RRP 73

Query: 81  VP--PSLAGSFSLPPTPDSRFADWRTTGGVRKAAGLGASVAGYLEHNLRAHQLEMDQLGT 138
           +P  P    S  +PP P  R   W +  G   A   G  V   L            +L +
Sbjct: 74  LPAGPHPGLSAEVPPVPSRR---WLSGRGKAGAVLAGTGVYALLPE-------AGSRLCS 123

Query: 139 TPPCNHAAGTPPLRLIHSLP-HAPPASASAQ 168
            P     A TP  R + SLP HAP      Q
Sbjct: 124 LP--GFCAATPHPRRLSSLPLHAPAGQGELQ 152


>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
          Length = 1970

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 20   TAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARR 79
            T+P  +      +P +   SP SP+ S S+PR  P     TP     + S+P  +P + +
Sbjct: 1779 TSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1838

Query: 80   TVPPSLAGSFSLPP-TPDS 97
              P S + S S P  TP S
Sbjct: 1839 YTPTSPSYSPSSPEYTPTS 1857



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 7    TADSSRQTDSAPR---TAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGG 63
            T  S + + ++P+   T+PK +      +P T + SP SP  S ++P   P     +P  
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTS 1913

Query: 64   SGQNGSAPQAAPQARRTVPPSLAGSFSLPPTP 95
               + ++P+ +P +    P S  GS   P +P
Sbjct: 1914 PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945



 Score = 32.3 bits (72), Expect = 0.62
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 10   SSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGS 69
            S   + ++P  +P + R      PQ+   +P SP+ S S+P  +P     TP     + S
Sbjct: 1794 SPSYSPTSPSYSPSSPR----YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849

Query: 70   APQAAPQARRTVPPS 84
            +P+  P + +  P S
Sbjct: 1850 SPEYTPTSPKYSPTS 1864



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/76 (25%), Positives = 34/76 (44%)

Query: 17   APRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQ 76
            +P +     R   G  PQ+   SP SP+ S ++P  +P     +P     + ++P  +P 
Sbjct: 1594 SPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1653

Query: 77   ARRTVPPSLAGSFSLP 92
            +    P S + S + P
Sbjct: 1654 SPSYSPTSPSYSPTSP 1669



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/73 (26%), Positives = 33/73 (45%)

Query: 20   TAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARR 79
            T+P  +      +P +   +P SP  S ++P  +P     +P     + S+P+  PQ+  
Sbjct: 1758 TSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPT 1817

Query: 80   TVPPSLAGSFSLP 92
              P S + S S P
Sbjct: 1818 YTPSSPSYSPSSP 1830



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 10   SSRQTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGS 69
            S   + S+PR  P++        P +   SP SP+ S ++P+  P     +P       +
Sbjct: 1801 SPSYSPSSPRYTPQSPT----YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 70   APQAAPQARRTVPPS 84
            +P+ +P + +  P S
Sbjct: 1857 SPKYSPTSPKYSPTS 1871



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/65 (24%), Positives = 29/65 (44%)

Query: 20   TAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARR 79
            T+P  +      +P +   SP SP+ S ++P  +P     TP     + ++P  +P +  
Sbjct: 1716 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPN 1775

Query: 80   TVPPS 84
              P S
Sbjct: 1776 YTPTS 1780



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 20   TAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQAAPQARR 79
            T+P  +      +P +   +P SP+ S ++P  +P     TP     + ++P  +P +  
Sbjct: 1737 TSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPS 1796

Query: 80   TVPPSLAGSFSLPP-TPDS 97
              P S + S S P  TP S
Sbjct: 1797 YSPTSPSYSPSSPRYTPQS 1815



 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/80 (23%), Positives = 36/80 (45%)

Query: 13   QTDSAPRTAPKAARDVNGSAPQTAQASPDSPAGSGSAPRIAPLISIRTPGGSGQNGSAPQ 72
            Q+ S   T+P  +      +P +   SP SP+ S ++P  +P     +P     + ++P 
Sbjct: 1611 QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670

Query: 73   AAPQARRTVPPSLAGSFSLP 92
             +P +    P S + S + P
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSP 1690


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.128    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,335,811
Number of Sequences: 37866
Number of extensions: 1030897
Number of successful extensions: 6469
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 487
Number of HSP's that attempted gapping in prelim test: 5706
Number of HSP's gapped (non-prelim): 1160
length of query: 338
length of database: 18,247,518
effective HSP length: 103
effective length of query: 235
effective length of database: 14,347,320
effective search space: 3371620200
effective search space used: 3371620200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.