Guide to the Human Genome
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Search of human proteins with 169170482

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169170482 PREDICTED: hypothetical protein LOC441239 [Homo
sapiens]
         (542 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169170482 PREDICTED: hypothetical protein LOC441239 [Homo sap...  1102   0.0  
gi|169172306 PREDICTED: hypothetical protein LOC441239 [Homo sap...   964   0.0  
gi|113418608 PREDICTED: hypothetical protein LOC441239 [Homo sap...   615   e-176
gi|169171788 PREDICTED: hypothetical protein LOC441239 [Homo sap...   609   e-174
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]     45   2e-04
gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [H...    44   3e-04
gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Ho...    44   3e-04
gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Hom...    44   3e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       43   8e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    42   0.001
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       42   0.001
gi|226437606 ankyrin repeat domain 34C [Homo sapiens]                  41   0.002
gi|239756364 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]       41   0.002
gi|239750889 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]       41   0.002
gi|239745252 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]       41   0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    40   0.007
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    40   0.007
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    40   0.007
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    39   0.009
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    39   0.009
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    39   0.009
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    39   0.009
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               39   0.016
gi|112421108 capicua homolog [Homo sapiens]                            39   0.016
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            38   0.021
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ...    38   0.021
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           38   0.027
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           38   0.027
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]           38   0.027
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              38   0.027

>gi|169170482 PREDICTED: hypothetical protein LOC441239 [Homo
           sapiens]
          Length = 542

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 542/542 (100%), Positives = 542/542 (100%)

Query: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60
           MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR
Sbjct: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60

Query: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120
           SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC
Sbjct: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120

Query: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180
           LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH
Sbjct: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180

Query: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240
           PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL
Sbjct: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240

Query: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300
           SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV
Sbjct: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300

Query: 301 WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPTRVHKGPLVHQEGETC 360
           WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPTRVHKGPLVHQEGETC
Sbjct: 301 WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPTRVHKGPLVHQEGETC 360

Query: 361 HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI 420
           HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI
Sbjct: 361 HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI 420

Query: 421 RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVEDYQL 480
           RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVEDYQL
Sbjct: 421 RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVEDYQL 480

Query: 481 LLGEGGVVIWAPARLSQPPNSPRIQEPRKKYRTRSPAAQAEPHRGVPEGRATRKKKKKRC 540
           LLGEGGVVIWAPARLSQPPNSPRIQEPRKKYRTRSPAAQAEPHRGVPEGRATRKKKKKRC
Sbjct: 481 LLGEGGVVIWAPARLSQPPNSPRIQEPRKKYRTRSPAAQAEPHRGVPEGRATRKKKKKRC 540

Query: 541 SA 542
           SA
Sbjct: 541 SA 542


>gi|169172306 PREDICTED: hypothetical protein LOC441239 [Homo
           sapiens]
          Length = 505

 Score =  964 bits (2493), Expect = 0.0
 Identities = 478/503 (95%), Positives = 482/503 (95%)

Query: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60
           MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR
Sbjct: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60

Query: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120
           SEETVEDRVAPGAARNQGDLEE+GNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC
Sbjct: 61  SEETVEDRVAPGAARNQGDLEESGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120

Query: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180
           LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRS TSH
Sbjct: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSGTSH 180

Query: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240
           PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL
Sbjct: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240

Query: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300
           SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV
Sbjct: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300

Query: 301 WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPTRVHKGPLVHQEGETC 360
           WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPT VHKGPLVHQEGETC
Sbjct: 301 WMQVLDSHKGEEPVTHPTTPLKWVKGNPGAGHPAQKKRSKSPTPTHVHKGPLVHQEGETC 360

Query: 361 HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI 420
           HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI
Sbjct: 361 HQATVAYTDTRAKAHRSRQVSRDWRMRIREAGAGARLSGLSGLASSGRLISRVPLEEKAI 420

Query: 421 RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVEDYQL 480
           RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVED   
Sbjct: 421 RECEVGAGNFSLDSIPERVCVQESGPREKGIQSGELLRDLRVMESYLRPQRRVSVEDLSQ 480

Query: 481 LLGEGGVVIWAPARLSQPPNSPR 503
           L     V ++        P+  R
Sbjct: 481 LPSPQNVTVFRRKHSYNGPHEGR 503


>gi|113418608 PREDICTED: hypothetical protein LOC441239 [Homo
           sapiens]
          Length = 301

 Score =  615 bits (1587), Expect = e-176
 Identities = 301/301 (100%), Positives = 301/301 (100%)

Query: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60
           MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR
Sbjct: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60

Query: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120
           SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC
Sbjct: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120

Query: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180
           LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH
Sbjct: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180

Query: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240
           PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL
Sbjct: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240

Query: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300
           SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV
Sbjct: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300

Query: 301 W 301
           W
Sbjct: 301 W 301


>gi|169171788 PREDICTED: hypothetical protein LOC441239 [Homo
           sapiens]
          Length = 301

 Score =  609 bits (1570), Expect = e-174
 Identities = 298/301 (99%), Positives = 299/301 (99%)

Query: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60
           MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR
Sbjct: 1   MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLR 60

Query: 61  SEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120
           SEETVEDRVAPGAARNQGDLEE+GNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC
Sbjct: 61  SEETVEDRVAPGAARNQGDLEESGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPC 120

Query: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSH 180
           LAPGARTVPSAKRLRSRKWPPQCTSRQH VGSGSVSIRLCGAGCERDSPIPLSSRS TSH
Sbjct: 121 LAPGARTVPSAKRLRSRKWPPQCTSRQHAVGSGSVSIRLCGAGCERDSPIPLSSRSGTSH 180

Query: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240
           PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL
Sbjct: 181 PEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVL 240

Query: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300
           SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV
Sbjct: 241 SSLCEATELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAPGAPQVEEAQV 300

Query: 301 W 301
           W
Sbjct: 301 W 301


>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
          Length = 951

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 15/125 (12%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           PR T+   +  AP +SSP   + +  P P  P     L+S +  + ++A   A+ QGD  
Sbjct: 224 PRVTLEGPSATAP-ASSPGLAKPQMPPGPCSPGPLAQLQSRQR-DYKLAALHAKQQGDTT 281

Query: 82  ETGN-------------LASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAPGARTV 128
                              SRG+      LPPP  +L     SPP + P P  AP    V
Sbjct: 282 AAARHFRVAKSFDAVLEALSRGEPVDLSCLPPPPDQLPPDPPSPPSQPPTPATAPSTTEV 341

Query: 129 PSAKR 133
           P   R
Sbjct: 342 PPPPR 346


>gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [Homo
           sapiens]
          Length = 828

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 18  GRRGPRATVPEQ----TQAAPVSSSPAAFQQRGDPHPRQPH-LTVPLRSEETVEDRVAPG 72
           G RGP+     +    T+ +P S  P    ++GDP P  P  L   + ++    DR  PG
Sbjct: 415 GPRGPKGEPGRRGDPGTKGSPGSDGPKG--EKGDPGPEGPRGLAGEVGNKGAKGDRGLPG 472

Query: 73  AARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRG---PDPCLAPGARTVP 129
               QG L E G   SRGD  PG   P   S     +  P + G   P P  APG +  P
Sbjct: 473 PRGPQGALGEPGKQGSRGD--PGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEP 530

Query: 130 SAK 132
             +
Sbjct: 531 GPR 533


>gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Homo
           sapiens]
          Length = 918

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 18  GRRGPRATVPEQ----TQAAPVSSSPAAFQQRGDPHPRQPH-LTVPLRSEETVEDRVAPG 72
           G RGP+     +    T+ +P S  P    ++GDP P  P  L   + ++    DR  PG
Sbjct: 415 GPRGPKGEPGRRGDPGTKGSPGSDGPKG--EKGDPGPEGPRGLAGEVGNKGAKGDRGLPG 472

Query: 73  AARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRG---PDPCLAPGARTVP 129
               QG L E G   SRGD  PG   P   S     +  P + G   P P  APG +  P
Sbjct: 473 PRGPQGALGEPGKQGSRGD--PGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEP 530

Query: 130 SAK 132
             +
Sbjct: 531 GPR 533


>gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Homo
           sapiens]
          Length = 1019

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 18  GRRGPRATVPEQ----TQAAPVSSSPAAFQQRGDPHPRQPH-LTVPLRSEETVEDRVAPG 72
           G RGP+     +    T+ +P S  P    ++GDP P  P  L   + ++    DR  PG
Sbjct: 415 GPRGPKGEPGRRGDPGTKGSPGSDGPKG--EKGDPGPEGPRGLAGEVGNKGAKGDRGLPG 472

Query: 73  AARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRG---PDPCLAPGARTVP 129
               QG L E G   SRGD  PG   P   S     +  P + G   P P  APG +  P
Sbjct: 473 PRGPQGALGEPGKQGSRGD--PGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEP 530

Query: 130 SAK 132
             +
Sbjct: 531 GPR 533


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 72/274 (26%), Positives = 94/274 (34%), Gaps = 64/274 (23%)

Query: 100 PPASELSSARASPPQRGPDPCLAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRL 159
           PPA +    +  PPQ GP P      R  P  ++    + PPQ   +QH          L
Sbjct: 455 PPAQQRPPPQGGPPQPGPGP-----QRQGPPLQQ----RPPPQ--GQQH----------L 493

Query: 160 CGAGCERDSPIPLSSRSRTSHPEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSAT 219
            G G    SP+P    S TS P+  A  AAP +  + R   P        V GG      
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP--------VAGGPGAPPA 545

Query: 220 VKIKIIIIKNEWVSNLSSEVLSSLCEATELTGGRTPIETGTSDEGAPSSG-WRVGQQQQQ 278
            +           ++ S +  +   +AT  T    P     S  GAP  G  R G  Q+ 
Sbjct: 546 ARPP---------ASPSPQRQAGPPQATRQTSVSGPAPPKAS--GAPPGGQQRQGPPQKP 594

Query: 279 PGFREWGEMRAPGAPQVEEAQVWMQVLDSHKGEEPVTHPTTPLKWVKGNPG-AGHP---- 333
           PG         P  P  + +Q          G  P T P T  +     PG AG P    
Sbjct: 595 PG---------PAGPTRQASQA---------GPVPRTGPPTTQQPRPSGPGPAGRPKPQL 636

Query: 334 AQKKRSKSPTPTRVHKGPLVHQEGETCHQATVAY 367
           AQK     P P     G   H +       T A+
Sbjct: 637 AQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAF 670


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 12/131 (9%)

Query: 20  RGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGD 79
           RGP    P Q+   P    P   QQ+  P P+QP    P   +     +           
Sbjct: 44  RGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103

Query: 80  LEETGNLASRGDA-APGKGLPPPASELSSARASPPQRGPDPCLAPGARTVPSAKRLRSRK 138
            + +  + ++G   APG G  PPAS  S+  A+PP  G  P   PG    P         
Sbjct: 104 QDSSKPVVAQGPGPAPGVGSAPPASS-SAPPATPPTSGAPPGSGPGPTPTP--------- 153

Query: 139 WPPQCTSRQHG 149
            PP  TS   G
Sbjct: 154 -PPAVTSAPPG 163



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 39/143 (27%), Positives = 49/143 (34%), Gaps = 37/143 (25%)

Query: 18  GRRGPRATVP----EQTQAAPVSSSPAAFQ---QRGDPHPRQPHLTV--PLRSEETVEDR 68
           G+ GP+  +P     Q Q  P    P   Q    +  PHP QPH     P   +++ +  
Sbjct: 52  GQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHP-QPHQQQQPPPPPQDSSKPV 110

Query: 69  VA--PGAARNQGDLEETGNLAS-----RGDAAPGKG-----------------LPPPASE 104
           VA  PG A   G      + A         A PG G                  PPP   
Sbjct: 111 VAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPP 170

Query: 105 LSSARASPPQRG---PDPCLAPG 124
            S    +PPQ G   P P   PG
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVPG 193


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 70/263 (26%), Positives = 91/263 (34%), Gaps = 64/263 (24%)

Query: 100 PPASELSSARASPPQRGPDPCLAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRL 159
           PPA +    +  PPQ GP P      R  P  ++    + PPQ   +QH          L
Sbjct: 455 PPAQQRPPPQGGPPQPGPGP-----QRQGPPLQQ----RPPPQ--GQQH----------L 493

Query: 160 CGAGCERDSPIPLSSRSRTSHPEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSAT 219
            G G    SP+P    S TS P+  A  AAP +  + R   P        V GG      
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP--------VAGGPGAPPA 545

Query: 220 VKIKIIIIKNEWVSNLSSEVLSSLCEATELTGGRTPIETGTSDEGAPSSG-WRVGQQQQQ 278
            +           ++ S +  +   +AT  T    P     S  GAP  G  R G  Q+ 
Sbjct: 546 ARPP---------ASPSPQRQAGPPQATRQTSVSGPAPPKAS--GAPPGGQQRQGPPQKP 594

Query: 279 PGFREWGEMRAPGAPQVEEAQVWMQVLDSHKGEEPVTHPTTPLKWVKGNPG-AGHP---- 333
           PG         P  P  + +Q          G  P T P T  +     PG AG P    
Sbjct: 595 PG---------PAGPTRQASQA---------GPVPRTGPPTTQQPRPSGPGPAGRPKPQL 636

Query: 334 AQKKRSKSPTPTRVHKGPLVHQE 356
           AQK     P P     G   H +
Sbjct: 637 AQKPSQDVPPPATAAAGGPPHPQ 659


>gi|226437606 ankyrin repeat domain 34C [Homo sapiens]
          Length = 535

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 16/143 (11%)

Query: 25  TVPEQTQAAPVSSSP----AAFQQRGDPHPRQPHL-TVPLRSEETVEDRVAPGAARNQGD 79
           TV EQ    PVSS+P    AA+++   PHPR     T+P+  E+       P A +    
Sbjct: 312 TVTEQVLKIPVSSAPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMGPSGPSALKEPAS 371

Query: 80  LEETGNLASRGDAAPGKGLPPPASELSSARASPPQR---GPDPCLAPGAR----TVPSAK 132
           L+   N     D  PG   PP +  L S +    ++        L  G+R    TVPS  
Sbjct: 372 LKWLENDLYDLDIQPGPD-PPNSISLESGKGPLDRKKLNSSHLSLFHGSRESLDTVPSTS 430

Query: 133 RLRSRKWPPQCTSRQHGVGSGSV 155
              +R+ PP    R+   GSG++
Sbjct: 431 PSSARRRPPHLLERR---GSGTL 450


>gi|239756364 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
          Length = 534

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 16/143 (11%)

Query: 25  TVPEQTQAAPVSSSP----AAFQQRGDPHPRQPHL-TVPLRSEETVEDRVAPGAARNQGD 79
           TV EQ    PVSS+P    AA+++   PHPR     T+P+  E+       P A +    
Sbjct: 311 TVTEQVLKIPVSSAPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMGPSGPSALKEPAS 370

Query: 80  LEETGNLASRGDAAPGKGLPPPASELSSARASPPQR---GPDPCLAPGAR----TVPSAK 132
           L+   N     D  PG   PP +  L S +    ++        L  G+R    TVPS  
Sbjct: 371 LKWLENDLYDLDIQPGPD-PPNSISLESGKGPLDRKKLNSSHLSLFHGSRESLDTVPSTS 429

Query: 133 RLRSRKWPPQCTSRQHGVGSGSV 155
              +R+ PP    R+   GSG++
Sbjct: 430 PSSARRRPPHLLERR---GSGTL 449


>gi|239750889 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
          Length = 534

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 16/143 (11%)

Query: 25  TVPEQTQAAPVSSSP----AAFQQRGDPHPRQPHL-TVPLRSEETVEDRVAPGAARNQGD 79
           TV EQ    PVSS+P    AA+++   PHPR     T+P+  E+       P A +    
Sbjct: 311 TVTEQVLKIPVSSAPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMGPSGPSALKEPAS 370

Query: 80  LEETGNLASRGDAAPGKGLPPPASELSSARASPPQR---GPDPCLAPGAR----TVPSAK 132
           L+   N     D  PG   PP +  L S +    ++        L  G+R    TVPS  
Sbjct: 371 LKWLENDLYDLDIQPGPD-PPNSISLESGKGPLDRKKLNSSHLSLFHGSRESLDTVPSTS 429

Query: 133 RLRSRKWPPQCTSRQHGVGSGSV 155
              +R+ PP    R+   GSG++
Sbjct: 430 PSSARRRPPHLLERR---GSGTL 449


>gi|239745252 PREDICTED: ankyrin repeat domain 34C [Homo sapiens]
          Length = 535

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 16/143 (11%)

Query: 25  TVPEQTQAAPVSSSP----AAFQQRGDPHPRQPHL-TVPLRSEETVEDRVAPGAARNQGD 79
           TV EQ    PVSS+P    AA+++   PHPR     T+P+  E+       P A +    
Sbjct: 312 TVTEQVLKIPVSSAPASWKAAYEKGQAPHPRLARRGTLPVDQEKCGMGPSGPSALKEPAS 371

Query: 80  LEETGNLASRGDAAPGKGLPPPASELSSARASPPQR---GPDPCLAPGAR----TVPSAK 132
           L+   N     D  PG   PP +  L S +    ++        L  G+R    TVPS  
Sbjct: 372 LKWLENDLYDLDIQPGPD-PPNSISLESGKGPLDRKKLNSSHLSLFHGSRESLDTVPSTS 430

Query: 133 RLRSRKWPPQCTSRQHGVGSGSV 155
              +R+ PP    R+   GSG++
Sbjct: 431 PSSARRRPPHLLERR---GSGTL 450


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 76/284 (26%), Positives = 103/284 (36%), Gaps = 47/284 (16%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRG-DPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDL 80
           P   VP    A+P   +P      G D     P LT+ L          +P +  +  DL
Sbjct: 569 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 628

Query: 81  EETGNLAS------RG-DAAPGKGL---PPPASELSSARASPPQRGPDPCLAPGARTVPS 130
               + A+      RG D+ P  G    PPP +EL++   +   RGP P LA   R  P 
Sbjct: 629 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA--FRGAPG 686

Query: 131 AKRLRSRKWPPQCTSRQHGVGSGSVSIRLC----GAGCERDSPIPLSSRSRTSHPEDFAE 186
           A       WPP         G GS    LC      G E  +P P  +      P     
Sbjct: 687 A----PLPWPP-------ATGPGSAD-GLCTIYETEGPESATPAP-GALDPGPSPGTSGG 733

Query: 187 DAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVLSSLCEA 246
            AA  +GA   SR P+   + E   G   L A+V           V +L S  L  L  A
Sbjct: 734 KAAAGAGAGASSRSPKQARLGELPLG--ALQASV-----------VQHLLSRTL--LLAA 778

Query: 247 TELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAP 290
            E   G +    G ++ G  + G R      + G   W E+ +P
Sbjct: 779 AEGAAGGSGGGPGGAEGGGVTGGARAALSDAELG--RWAELLSP 820



 Score = 36.2 bits (82), Expect = 0.079
 Identities = 58/207 (28%), Positives = 73/207 (35%), Gaps = 29/207 (14%)

Query: 12  ASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHP-RQPHLTVPLRSEETVEDRVA 70
           ASR  A  RG RA   + T   PV SSP        P P  Q  L +      + E+ VA
Sbjct: 91  ASRPPASGRGERAPPAKNTSPGPV-SSPGRASGTTRPGPLGQKGLRI------SAEETVA 143

Query: 71  PGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAPGARTVPS 130
            G A            A R  + P  G P PA    S  A      P P  AP AR  P 
Sbjct: 144 RGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP--APSARPRPP 201

Query: 131 AKRLRSRKWPPQCTSRQHGVGSGSVSIR---LCGAGCER-------DSPIPLSSRSRT-- 178
            +  R        ++ +H     S + R     G G +R        S  PLSS +R+  
Sbjct: 202 TEGPRK----SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP 257

Query: 179 ---SHPEDFAEDAAPWSGAENRSRPPR 202
                P   A  + P        RPP+
Sbjct: 258 SARGTPRAPAHPSQPKPKGLQALRPPQ 284



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 21/164 (12%)

Query: 21  GPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDL 80
           GPR +V   ++ +    SPAA ++       Q   +  L S  T     A      +G  
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG-- 261

Query: 81  EETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAP---GARTVPSAKRLRSR 137
                   R  A P +  P     L   + +PP++   P L P        PS       
Sbjct: 262 ------TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQS 315

Query: 138 KWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSHP 181
           + PP   +  H   S S++       C+  +P+PL+  S ++ P
Sbjct: 316 QAPPTLPATPH---SSSLT-------CQLATPLPLAPPSPSAPP 349



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           P A+ P    A P   +P A        P  P  + P+++        +P A+       
Sbjct: 411 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP------FSPPASPPVSPSA 464

Query: 82  ETGNLASRGDAAPGKGLPP--PASELSSARASPPQRGPDPCLAP 123
              + A    AAP   +PP  PAS   S  A+PP + P P  AP
Sbjct: 465 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 1124

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 76/284 (26%), Positives = 103/284 (36%), Gaps = 47/284 (16%)

Query: 22   PRATVPEQTQAAPVSSSPAAFQQRG-DPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDL 80
            P   VP    A+P   +P      G D     P LT+ L          +P +  +  DL
Sbjct: 838  PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 897

Query: 81   EETGNLAS------RG-DAAPGKGL---PPPASELSSARASPPQRGPDPCLAPGARTVPS 130
                + A+      RG D+ P  G    PPP +EL++   +   RGP P LA   R  P 
Sbjct: 898  AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA--FRGAPG 955

Query: 131  AKRLRSRKWPPQCTSRQHGVGSGSVSIRLC----GAGCERDSPIPLSSRSRTSHPEDFAE 186
            A       WPP         G GS    LC      G E  +P P  +      P     
Sbjct: 956  A----PLPWPP-------ATGPGSAD-GLCTIYETEGPESATPAP-GALDPGPSPGTSGG 1002

Query: 187  DAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVLSSLCEA 246
             AA  +GA   SR P+   + E   G   L A+V           V +L S  L  L  A
Sbjct: 1003 KAAAGAGAGASSRSPKQARLGELPLG--ALQASV-----------VQHLLSRTL--LLAA 1047

Query: 247  TELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAP 290
             E   G +    G ++ G  + G R      + G   W E+ +P
Sbjct: 1048 AEGAAGGSGGGPGGAEGGGVTGGARAALSDAELG--RWAELLSP 1089



 Score = 36.2 bits (82), Expect = 0.079
 Identities = 58/207 (28%), Positives = 73/207 (35%), Gaps = 29/207 (14%)

Query: 12  ASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHP-RQPHLTVPLRSEETVEDRVA 70
           ASR  A  RG RA   + T   PV SSP        P P  Q  L +      + E+ VA
Sbjct: 91  ASRPPASGRGERAPPAKNTSPGPV-SSPGRASGTTRPGPLGQKGLRI------SAEETVA 143

Query: 71  PGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAPGARTVPS 130
            G A            A R  + P  G P PA    S  A      P P  AP AR  P 
Sbjct: 144 RGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP--APSARPRPP 201

Query: 131 AKRLRSRKWPPQCTSRQHGVGSGSVSIR---LCGAGCER-------DSPIPLSSRSRT-- 178
            +  R        ++ +H     S + R     G G +R        S  PLSS +R+  
Sbjct: 202 TEGPRK----SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP 257

Query: 179 ---SHPEDFAEDAAPWSGAENRSRPPR 202
                P   A  + P        RPP+
Sbjct: 258 SARGTPRAPAHPSQPKPKGLQALRPPQ 284



 Score = 32.7 bits (73), Expect = 0.87
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           P A+ P    A P   +P A        P  P  + P+++        +P A+       
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP------FSPPASPPVSPSA 689

Query: 82  ETGNLASRGDAAPGKGLPP--PASELSSARASPPQRGPDPCLAPGARTVPS 130
              + A    AAP   +PP  PAS   S  A+PP + P P  AP  +  PS
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS 740



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 34/144 (23%), Positives = 48/144 (33%), Gaps = 23/144 (15%)

Query: 9   SQTASRAFAGRRGPRATVPEQTQA---APVSSSPAAFQQ----RGDPHPRQPHLTVPLRS 61
           SQ   +     R P+ T P +  A    P+SSSP A       +  P P   +   PL +
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPA 329

Query: 62  EETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCL 121
                  +A                     A P    PP    L S  A+PP + P    
Sbjct: 330 TLPPSPPLATPLPL----------------APPSPSAPPSLQTLPSPPATPPSQAPPSMT 373

Query: 122 APGARTVPSAKRLRSRKWPPQCTS 145
            P  +  PS + +   + P   TS
Sbjct: 374 TPPMQAPPSLQTIPPIQVPHSLTS 397



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 30/111 (27%), Positives = 39/111 (35%), Gaps = 20/111 (18%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           P A+ P    A P S +P +        P  P  + P+    T   +  P  A       
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA------- 731

Query: 82  ETGNLASRGDAAPGKGLPP--PASELSSARASPPQRGPDPCLAPGARTVPS 130
                      AP   +PP  PAS   S  A+PP R P    AP  +  PS
Sbjct: 732 -----------APPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 29/111 (26%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           P A+ P    A P   +P          P  P  + P+    T   RV P  A       
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLA------- 762

Query: 82  ETGNLASRGDAAPGKGLPP--PASELSSARASPPQRGPDPCLAPGARTVPS 130
                      AP   +PP  PAS   S  A PP + P     P  + +PS
Sbjct: 763 -----------APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802



 Score = 29.6 bits (65), Expect = 7.3
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 21  GPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDL 80
           GPR +V   ++ +    SPAA ++       Q   +  L S  T     A      +G  
Sbjct: 204 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG-- 261

Query: 81  EETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAP---GARTVPSAKRLRSR 137
                   R  A P +  P     L   + +PP++   P L P        PS    ++R
Sbjct: 262 ------TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKAR 315

Query: 138 KWPP 141
             PP
Sbjct: 316 PVPP 319


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 76/284 (26%), Positives = 103/284 (36%), Gaps = 47/284 (16%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRG-DPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDL 80
           P   VP    A+P   +P      G D     P LT+ L          +P +  +  DL
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDL 589

Query: 81  EETGNLAS------RG-DAAPGKGL---PPPASELSSARASPPQRGPDPCLAPGARTVPS 130
               + A+      RG D+ P  G    PPP +EL++   +   RGP P LA   R  P 
Sbjct: 590 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLA--FRGAPG 647

Query: 131 AKRLRSRKWPPQCTSRQHGVGSGSVSIRLC----GAGCERDSPIPLSSRSRTSHPEDFAE 186
           A       WPP         G GS    LC      G E  +P P  +      P     
Sbjct: 648 A----PLPWPP-------ATGPGSAD-GLCTIYETEGPESATPAP-GALDPGPSPGTSGG 694

Query: 187 DAAPWSGAENRSRPPRSCWVVEKVEGGQVLSATVKIKIIIIKNEWVSNLSSEVLSSLCEA 246
            AA  +GA   SR P+   + E   G   L A+V           V +L S  L  L  A
Sbjct: 695 KAAAGAGAGASSRSPKQARLGELPLG--ALQASV-----------VQHLLSRTL--LLAA 739

Query: 247 TELTGGRTPIETGTSDEGAPSSGWRVGQQQQQPGFREWGEMRAP 290
            E   G +    G ++ G  + G R      + G   W E+ +P
Sbjct: 740 AEGAAGGSGGGPGGAEGGGVTGGARAALSDAELG--RWAELLSP 781



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 57/206 (27%), Positives = 72/206 (34%), Gaps = 29/206 (14%)

Query: 13  SRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQRGDPHPR-QPHLTVPLRSEETVEDRVAP 71
           SR  A  RG RA   + T   PVSS P        P P  Q  L +      + E+ VA 
Sbjct: 83  SRPPASGRGERAPPAKNTSPGPVSS-PGRASGTTRPGPLGQKGLRI------SAEETVAR 135

Query: 72  GAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAPGARTVPSA 131
           G A            A R  + P  G P PA    S  A      P P  AP AR  P  
Sbjct: 136 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP--APSARPRPPT 193

Query: 132 KRLRSRKWPPQCTSRQHGVGSGSVSIR---LCGAGCER-------DSPIPLSSRSRT--- 178
           +  R        ++ +H     S + R     G G +R        S  PLSS +R+   
Sbjct: 194 EGPRK----SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS 249

Query: 179 --SHPEDFAEDAAPWSGAENRSRPPR 202
               P   A  + P        RPP+
Sbjct: 250 ARGTPRAPAHPSQPKPKGLQALRPPQ 275



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 22  PRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLE 81
           P A+ P    A P   +P A        P  P  + P+++        +P A+       
Sbjct: 372 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP------FSPPASPPVSPSA 425

Query: 82  ETGNLASRGDAAPGKGLPP--PASELSSARASPPQRGPDPCLAP 123
              + A    AAP   +PP  PAS   S  A+PP + P P  AP
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469



 Score = 29.3 bits (64), Expect = 9.6
 Identities = 34/123 (27%), Positives = 43/123 (34%), Gaps = 29/123 (23%)

Query: 32  AAPVSSSPAAFQQRGDP----HPRQPHLTVPLRSEETVEDRVAP---GAARNQGDLEETG 84
           ++P  S P+A   RG P    HP QP    P   +     +V P    AA   G L  + 
Sbjct: 241 SSPARSGPSA---RGTPRAPAHPSQPK---PKGLQALRPPQVTPPRKDAAPALGPLSSSP 294

Query: 85  NLASRGDAAPGKGLPPPASELSSARASPPQRG----------------PDPCLAPGARTV 128
                  A P    PP    L S  A+PP +                 P P L+P A   
Sbjct: 295 LATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP 354

Query: 129 PSA 131
           P A
Sbjct: 355 PQA 357


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 22   PRATVPEQTQAAPVSSSPAA--FQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGD 79
            PR T+ E +Q+ P  ++       Q   P  ++P  T+     E  ++ +          
Sbjct: 2667 PRVTLHELSQSVPQETAEGIPPGSQDSSPEHQEPR-TLDTTYGEVSDNLLVTAQGEKTAH 2725

Query: 80   LEETGNLASRGDAAPGKG-------LPPPASELSSARASPPQRGPDPCLAPGARTVPSAK 132
             E         ++    G        P  ++     RASP Q      + PGA T     
Sbjct: 2726 FESQSVTCDVQNSTSASGPKQDHVQCPEASTGFEEGRASPKQ----DIILPGALT----- 2776

Query: 133  RLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSHPEDFAEDA 188
            R+       QC   +  VGSG   +  C AG +   PIPL  +  +++P    E+A
Sbjct: 2777 RVALEAPTQQCVQCKESVGSGLTEV--CRAGSKHSRPIPLPDQRPSANPGGIGEEA 2830


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 22   PRATVPEQTQAAPVSSSPAA--FQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGD 79
            PR T+ E +Q+ P  ++       Q   P  ++P  T+     E  ++ +          
Sbjct: 2667 PRVTLHELSQSVPQETAEGIPPGSQDSSPEHQEPR-TLDTTYGEVSDNLLVTAQGEKTAH 2725

Query: 80   LEETGNLASRGDAAPGKG-------LPPPASELSSARASPPQRGPDPCLAPGARTVPSAK 132
             E         ++    G        P  ++     RASP Q      + PGA T     
Sbjct: 2726 FESQSVTCDVQNSTSASGPKQDHVQCPEASTGFEEGRASPKQ----DTILPGALT----- 2776

Query: 133  RLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSHPEDFAEDA 188
            R+       QC   +  VGSG   +  C AG +   PIPL  +  +++P    E+A
Sbjct: 2777 RVALEAPTQQCVQCKESVGSGLTEV--CRAGSKHSRPIPLPDQRPSANPGGIGEEA 2830


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 22   PRATVPEQTQAAPVSSSPAA--FQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGD 79
            PR T+ E +Q+ P  ++       Q   P  ++P  T+     E  ++ +          
Sbjct: 2667 PRVTLHELSQSVPQETAEGIPPGSQDSSPEHQEPR-TLDTTYGEVSDNLLVTAQGEKTAH 2725

Query: 80   LEETGNLASRGDAAPGKG-------LPPPASELSSARASPPQRGPDPCLAPGARTVPSAK 132
             E         ++    G        P  ++     RASP Q      + PGA T     
Sbjct: 2726 FESQSVTCDVQNSTSASGPKQDHVQCPEASTGFEEGRASPKQ----DTILPGALT----- 2776

Query: 133  RLRSRKWPPQCTSRQHGVGSGSVSIRLCGAGCERDSPIPLSSRSRTSHPEDFAEDA 188
            R+       QC   +  VGSG   +  C AG +   PIPL  +  +++P    E+A
Sbjct: 2777 RVALEAPTQQCVQCKESVGSGLTEV--CRAGSKHSRPIPLPDQRPSANPGGIGEEA 2830


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 36/103 (34%), Positives = 43/103 (41%), Gaps = 15/103 (14%)

Query: 20  RGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGD 79
           R P A  P    AAP S   A   +RG+P  +QP      R E+  E+  A GAA    D
Sbjct: 90  REPPAAAPSAGGAAPCSPRGA---RRGEPPQQQPRRR---RREKEPEEEPA-GAAARAAD 142

Query: 80  LEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLA 122
               G   S    APGKG          ++ SP QR P P  A
Sbjct: 143 AACNGLPGSDSRRAPGKG--------GGSKGSPGQRPPVPAAA 177


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 20/132 (15%)

Query: 9   SQTASRAFAGRRGPRATVP----EQTQAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEET 64
           +Q A+R   GR   R   P       + +P    P A  +RG             R  E 
Sbjct: 363 AQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRG-------------RMAEA 409

Query: 65  VEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCLAPG 124
              R +P A +      ET +L  R  A P      P +E    R   P+RGP P LA  
Sbjct: 410 SGRRGSPRARKASRSQSET-SLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLA-- 466

Query: 125 ARTVPSAKRLRS 136
           A+   S +R RS
Sbjct: 467 AQAAGSCRRWRS 478


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 44/162 (27%), Positives = 58/162 (35%), Gaps = 44/162 (27%)

Query: 9    SQTASRAFAGRRGPRATVPEQTQAA----PVSSSPAAFQQRGDPHPRQPHLTVPLRS--- 61
            S T S      + P    P++ +AA    PV S  A    R  P PRQP    P+R    
Sbjct: 1159 SMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTA 1218

Query: 62   -EETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARA---------- 110
             E  +E +  P A      L ET    +R        LPPPA E +SA+           
Sbjct: 1219 PESELEGQPTPPA---PPPLPETWTPTARSSPP----LPPPAEERTSAKGPETMASKFPS 1271

Query: 111  -------------------SPPQRGPDPCLAPGARTVPSAKR 133
                               +PP   P P +APG  +  S+ R
Sbjct: 1272 SSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGR 1313


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 58/245 (23%), Positives = 84/245 (34%), Gaps = 64/245 (26%)

Query: 12  ASRAFAGR-RGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTV--------PLRSE 62
           + R  AG  RGP A++  + +  P     AA   R +    +P ++V        PL+  
Sbjct: 162 SGRGCAGAARGPDASLDTRREGWP----RAAVVGRHEARRLKPGVSVSSSLSPGPPLQRS 217

Query: 63  ETVEDRVAPGAARNQGDLEETGNLASRGDAA-----------------PGKGLPP----- 100
            ++ + +   AA  +    E G    R +                   PG+ LPP     
Sbjct: 218 SSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRPQRLHPGRPLPPQRRPP 277

Query: 101 -PASELSSAR---ASPPQRGPDPCLAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVS 156
            PA   + A    A+PP R P       A   P+   L +R W P   ++  G G G+  
Sbjct: 278 GPAPAAAGATRGTAAPPGRDPSAWFLDSASACPTP--LAARSWHPFVANKLCGRGKGA-- 333

Query: 157 IRLCGAGCERDSPIPLSSRSRTSHP----------------EDFAEDAAPWSGAENRSRP 200
               G G  R      S R+R   P                ED   +A  W   E    P
Sbjct: 334 ----GGGASRPKEGVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTEATLWPSREVPREP 389

Query: 201 PR-SC 204
            R SC
Sbjct: 390 SRPSC 394


>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
           sapiens]
          Length = 449

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 58/245 (23%), Positives = 84/245 (34%), Gaps = 64/245 (26%)

Query: 12  ASRAFAGR-RGPRATVPEQTQAAPVSSSPAAFQQRGDPHPRQPHLTV--------PLRSE 62
           + R  AG  RGP A++  + +  P     AA   R +    +P ++V        PL+  
Sbjct: 162 SGRGCAGAARGPDASLDTRREGWP----RAAVVGRHEARRLKPGVSVSSSLSPGPPLQRS 217

Query: 63  ETVEDRVAPGAARNQGDLEETGNLASRGDAA-----------------PGKGLPP----- 100
            ++ + +   AA  +    E G    R +                   PG+ LPP     
Sbjct: 218 SSLNETLRSAAAHAESSARECGKRTQRPEQRFLCRGSSFCGHRPQRLHPGRPLPPQRRPP 277

Query: 101 -PASELSSAR---ASPPQRGPDPCLAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVS 156
            PA   + A    A+PP R P       A   P+   L +R W P   ++  G G G+  
Sbjct: 278 GPAPAAAGATRGTAAPPGRDPSAWFLDSASACPTP--LAARSWHPFVANKLCGRGKGA-- 333

Query: 157 IRLCGAGCERDSPIPLSSRSRTSHP----------------EDFAEDAAPWSGAENRSRP 200
               G G  R      S R+R   P                ED   +A  W   E    P
Sbjct: 334 ----GGGASRPKEGVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTEATLWPSREVPREP 389

Query: 201 PR-SC 204
            R SC
Sbjct: 390 SRPSC 394


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 33/160 (20%)

Query: 12  ASRAFAGRRGPRATVPEQTQAAP----------VSSSPAAFQQRGDPHPRQPHLTVPLRS 61
           A+ A  G R P A +PE T+ AP           +++ A ++ R  P P    L     S
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFL-----S 245

Query: 62  EETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCL 121
                 R  P   R      E+G    RG  + G          + A A P    P PCL
Sbjct: 246 PRRTRPRKHPERTRRPAQRLESG---CRGHCSRG----------APALAPPKLSPPFPCL 292

Query: 122 APGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCG 161
           A  A     A+R  S         R+  +GSGS+++ L G
Sbjct: 293 AQSASRAAGARRALSAS-----RGRRGLLGSGSLALPLPG 327


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 33/160 (20%)

Query: 12  ASRAFAGRRGPRATVPEQTQAAP----------VSSSPAAFQQRGDPHPRQPHLTVPLRS 61
           A+ A  G R P A +PE T+ AP           +++ A ++ R  P P    L     S
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFL-----S 245

Query: 62  EETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCL 121
                 R  P   R      E+G    RG  + G          + A A P    P PCL
Sbjct: 246 PRRTRPRKHPERTRRPAQRLESG---CRGHCSRG----------APALAPPKLSPPFPCL 292

Query: 122 APGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCG 161
           A  A     A+R  S         R+  +GSGS+++ L G
Sbjct: 293 AQSASRAAGARRALSAS-----RGRRGLLGSGSLALPLPG 327


>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 33/160 (20%)

Query: 12  ASRAFAGRRGPRATVPEQTQAAP----------VSSSPAAFQQRGDPHPRQPHLTVPLRS 61
           A+ A  G R P A +PE T+ AP           +++ A ++ R  P P    L     S
Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFL-----S 245

Query: 62  EETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPASELSSARASPPQRGPDPCL 121
                 R  P   R      E+G    RG  + G          + A A P    P PCL
Sbjct: 246 PRRTRPRKHPERTRRPAQRLESG---CRGHCSRG----------APALAPPKLSPPFPCL 292

Query: 122 APGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLCG 161
           A  A     A+R  S         R+  +GSGS+++ L G
Sbjct: 293 AQSASRAAGARRALSAS-----RGRRGLLGSGSLALPLPG 327


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 31   QAAPVSSSPAAFQQRGDPHPRQPHLTVPLRSEET------VEDRVAPGAARNQGDLEETG 84
            +A P S    A +  G+  P    +  P   EE       VE   A G A+ + + E  G
Sbjct: 2188 EAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQG 2247

Query: 85   NLASRGDAAPGKGLPPPASELSSA----RASPPQR--GPDPCLAPGARTVPSAKRLRS 136
                    + G G    ASE SS     R +PP    G  P   PG++T PS+ R  S
Sbjct: 2248 EKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASS 2305


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.129    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,555,966
Number of Sequences: 37866
Number of extensions: 1537092
Number of successful extensions: 6571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 6033
Number of HSP's gapped (non-prelim): 860
length of query: 542
length of database: 18,247,518
effective HSP length: 107
effective length of query: 435
effective length of database: 14,195,856
effective search space: 6175197360
effective search space used: 6175197360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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