Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169169677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169677 PREDICTED: hypothetical protein [Homo sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169677 PREDICTED: hypothetical protein [Homo sapiens] 355 8e-99
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 41 4e-04
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 40 0.001
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 40 0.001
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 39 0.002
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 39 0.002
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 39 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.003
gi|150170670 piccolo isoform 2 [Homo sapiens] 38 0.004
gi|150378539 piccolo isoform 1 [Homo sapiens] 38 0.004
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 38 0.005
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 38 0.005
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 37 0.006
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 37 0.008
gi|61102725 la related protein isoform 2 [Homo sapiens] 37 0.008
gi|39725634 la related protein isoform 1 [Homo sapiens] 37 0.008
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 37 0.010
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 37 0.010
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 37 0.010
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 36 0.013
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 36 0.013
gi|223941923 OTU domain containing 1 [Homo sapiens] 36 0.013
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.013
gi|239755412 PREDICTED: hypothetical protein [Homo sapiens] 36 0.013
gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo s... 36 0.013
gi|239752588 PREDICTED: hypothetical protein XP_002348309, parti... 36 0.013
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.013
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 36 0.013
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.013
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 36 0.013
>gi|169169677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 355 bits (912), Expect = 8e-99
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG 60
MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG
Sbjct: 1 MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG 60
Query: 61 ERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPA 120
ERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPA
Sbjct: 61 ERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPA 120
Query: 121 MPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
MPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK
Sbjct: 121 MPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 4e-04
Identities = 42/146 (28%), Positives = 53/146 (36%), Gaps = 12/146 (8%)
Query: 10 LRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGER---WLGR 66
L PG PP S + L G PP+ P P + G +R W
Sbjct: 98 LEPG-PPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTD 156
Query: 67 AHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKA--PGGRQAAPAMPSN 124
L G AG A GP+ G RA GRH+ + PG ++ P
Sbjct: 157 GERLRSGRGCAG----AARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSPGP 212
Query: 125 RDQRLAGCGRA--GKRPGGPNPARAG 148
QR + G+RP GP PA AG
Sbjct: 213 PLQRSSSLNETLRGRRPPGPAPAAAG 238
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/158 (31%), Positives = 60/158 (37%), Gaps = 30/158 (18%)
Query: 12 PGRPPSSAHLP----SALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRA 67
P PP S +P + PAV G+ V A PA PA G LG +
Sbjct: 994 PALPPGSQPIPPTGAAGPPAVH------GLAVAPASVVPA------PAGSGAPPGSLGPS 1041
Query: 68 HTLGRVGGAAGPTQEAPAG---PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
+G+ G AGP Q+ PAG P V PG G H P +P Q P PS
Sbjct: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-------GPHGP-SPFPNQQTP--PSM 1091
Query: 125 RDQRLAGCGRAG-KRPGGPNPARAGLSSPVWLVSSPLP 161
+ G G G PG P P SP + P P
Sbjct: 1092 MPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPP 1129
Score = 28.5 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 5 PVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLP 53
P + PG PP H PS P T + VP + P +DP P
Sbjct: 1062 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTP 1110
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 39.7 bits (91), Expect = 0.001
Identities = 48/161 (29%), Positives = 61/161 (37%), Gaps = 39/161 (24%)
Query: 12 PGRPPSSAHLP----SALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRA 67
P PP S +P + PAV G+ V A PA PA G LG +
Sbjct: 963 PALPPGSQPIPPTGAAGPPAVH------GLAVAPASVVPA------PAGSGAPPGSLGPS 1010
Query: 68 HTLGRVGGAAGPTQEAPAG---PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
+G+ G AGP Q+ PAG P V PG G H P +Q P+M
Sbjct: 1011 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-------GPHGPSPFPNQQTPPSM--- 1060
Query: 125 RDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
G PG +P AG ++P+ L P PP
Sbjct: 1061 ---------MPGAVPGSGHPGVAG-NAPLGLPFGMPPPPPP 1091
Score = 30.8 bits (68), Expect = 0.56
Identities = 47/188 (25%), Positives = 61/188 (32%), Gaps = 46/188 (24%)
Query: 5 PVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWL 64
P + PG PP H PS P T PP+ ++P A PG G +
Sbjct: 1031 PQPGAVPPGVPPPGPHGPSPFPNQQT--------------PPS---MMPGAVPGSGHPGV 1073
Query: 65 GRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRV--------RAEGYGRHQPKAPGGRQ 116
LG G P P P + G+ + G+ H P AP G
Sbjct: 1074 AGNAPLGLPFGM--PPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAP-GTL 1130
Query: 117 AAPAMPSNRDQRL-----AGCGRAGKRPGGPNPARAGLSSPVWLV---------SSPLPS 162
P +P + L A P GP A SP + +SPLP
Sbjct: 1131 PPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPD 1190
Query: 163 ----LPPN 166
LPP+
Sbjct: 1191 PGTPLPPD 1198
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 39.3 bits (90), Expect = 0.002
Identities = 41/130 (31%), Positives = 48/130 (36%), Gaps = 14/130 (10%)
Query: 42 APRPPASDPLL------PPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTA 95
AP PP P PPA P R R+H+L R G G + GP T G+
Sbjct: 685 APGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSY 744
Query: 96 RGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWL 155
R G +P PA + R Q A +R G P P LSS
Sbjct: 745 ATLTRRPGRSALVRTSP-SVTPTPARGTPRSQSFA---LRARRKGPPPPPPKRLSS---- 796
Query: 156 VSSPLPSLPP 165
VS P P PP
Sbjct: 797 VSGPSPEPPP 806
Score = 29.3 bits (64), Expect = 1.6
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 12 PGRPPSSAHLP----SALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGW----GERW 63
PG P ++ LP S+LPA GV P AP P P+ P PG RW
Sbjct: 945 PGESPPASSLPQPEPSSLPAQ-------GVPTPLAPSPAMQPPVPPCPGPGLESSAASRW 997
Query: 64 LG 65
G
Sbjct: 998 NG 999
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 39.3 bits (90), Expect = 0.002
Identities = 41/130 (31%), Positives = 48/130 (36%), Gaps = 14/130 (10%)
Query: 42 APRPPASDPLL------PPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTA 95
AP PP P PPA P R R+H+L R G G + GP T G+
Sbjct: 767 APGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSY 826
Query: 96 RGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWL 155
R G +P PA + R Q A +R G P P LSS
Sbjct: 827 ATLTRRPGRSALVRTSP-SVTPTPARGTPRSQSFA---LRARRKGPPPPPPKRLSS---- 878
Query: 156 VSSPLPSLPP 165
VS P P PP
Sbjct: 879 VSGPSPEPPP 888
Score = 29.3 bits (64), Expect = 1.6
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 12 PGRPPSSAHLP----SALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGW----GERW 63
PG P ++ LP S+LPA GV P AP P P+ P PG RW
Sbjct: 1027 PGESPPASSLPQPEPSSLPAQ-------GVPTPLAPSPAMQPPVPPCPGPGLESSAASRW 1079
Query: 64 LG 65
G
Sbjct: 1080 NG 1081
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 33/160 (20%)
Query: 16 PSSAHLPSALPAVATLG------GRLGVRVPFAPRPPASDP---LLPPAFPGWGERWLGR 66
P H P A P++A+LG R+ F P+ P P + P + P W
Sbjct: 1996 PPRPHRPEATPSMASLGPEGEELARVAEGTSFPPQEPRHSPQVKMAPTSSPAEPHCWPAE 2055
Query: 67 AHTLGRVGGAAGPT--QEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
A +G A PT QE PE G A+ E QP + A+ PS+
Sbjct: 2056 A----ALGTGAEPTCSQEGKLRPEPRRDGEAQ-----EAASETQPLSSPPTAASSKAPSS 2106
Query: 125 RDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLP 164
PG P P+RA S PLP++P
Sbjct: 2107 -----GSAQPPEGHPGKPEPSRA--------KSRPLPNMP 2133
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.5 bits (88), Expect = 0.003
Identities = 47/173 (27%), Positives = 60/173 (34%), Gaps = 19/173 (10%)
Query: 12 PGRP-PSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLP---PAFPG-WGERWLGR 66
P P P A P A + GG +AP PPA+ P P PA P G
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 67 AHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGR-------HQPKAPGGRQAAP 119
A GG A P+ + P VTP + +G A + + P +P G AA
Sbjct: 991 ATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT 1050
Query: 120 AMPSNRDQRLA-------GCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
+P A G G P P A SP ++P P P
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Score = 28.5 bits (62), Expect = 2.8
Identities = 46/177 (25%), Positives = 58/177 (32%), Gaps = 51/177 (28%)
Query: 5 PVGAKLRPGRPPSSA--------HLPSALPAVAT----LGGRLGVRVPFAPRPPASDPLL 52
P GA P P S H + PAV T GG AP PPA+ P
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Query: 53 PPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAP 112
P PG P + AP P VTP + +G P +
Sbjct: 1320 PKGSPG------------------TPPPKGAPT-PPAVTPPSPKGTPTLPA---TTPSSK 1357
Query: 113 GGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPL--PSLPPNK 167
GG P PS+++ G P P+ G P SP P++P K
Sbjct: 1358 GG----PTTPSSKE---------GPTPPAATPSHKG--GPAMTPPSPKRGPAIPSPK 1399
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 38.1 bits (87), Expect = 0.004
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 16/178 (8%)
Query: 4 KPVGAKLRPGRPPSSAHLPSA-LPAVATLGGRLGVRVPFAPRPPASDPLLPP-------- 54
+P G P + P A P+ + L + G++ P P P+ P
Sbjct: 393 QPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452
Query: 55 -AFPG-WGERWLGRAHTLGRVGGAAGPT--QEAPAGPEEVTPGTARGRVRAEGYGRHQPK 110
A PG + G ++ G A P Q PA P PG+A+ + G + P+
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 111 APGGRQAAPAMPSNR---DQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
PG + +P P + Q+ + ++P P+ + PV S P PP
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 38.1 bits (87), Expect = 0.004
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 16/178 (8%)
Query: 4 KPVGAKLRPGRPPSSAHLPSA-LPAVATLGGRLGVRVPFAPRPPASDPLLPP-------- 54
+P G P + P A P+ + L + G++ P P P+ P
Sbjct: 393 QPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452
Query: 55 -AFPG-WGERWLGRAHTLGRVGGAAGPT--QEAPAGPEEVTPGTARGRVRAEGYGRHQPK 110
A PG + G ++ G A P Q PA P PG+A+ + G + P+
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 111 APGGRQAAPAMPSNR---DQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
PG + +P P + Q+ + ++P P+ + PV S P PP
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 37.7 bits (86), Expect = 0.005
Identities = 51/166 (30%), Positives = 64/166 (38%), Gaps = 34/166 (20%)
Query: 12 PGRPPSSAHLP----SALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRA 67
P PP S +P + PAV G+ V A PA PA G LG +
Sbjct: 994 PALPPGSQPIPPTGAAGPPAVH------GLAVAPASVVPA------PAGSGAPPGSLGPS 1041
Query: 68 HTLGRVGGAAGPTQEAPAG---PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
+G+ G AGP Q+ PAG P V PG G H P +P Q P PS
Sbjct: 1042 EQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPP-------GPHGP-SPFPNQQTP--PSM 1091
Query: 125 RDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPS----LPPN 166
+ G G G P A + + +SPLP LPP+
Sbjct: 1092 MPGAVPGSGHPGVAAQSP-AIVAAVQGNLLPSASPLPDPGTPLPPD 1136
Score = 27.7 bits (60), Expect = 4.8
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 5 PVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRP--PASDPLLPPAFPGWGER 62
P + PG PP H PS P T + VP + P A P + A G
Sbjct: 1062 PQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQG---N 1118
Query: 63 WLGRAHTLGRVGGAAGPTQEAPAGPEEVTP 92
L A L G P AP+ P VTP
Sbjct: 1119 LLPSASPLPDPGTPLPPDPTAPS-PGTVTP 1147
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 37.7 bits (86), Expect = 0.005
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
Query: 12 PGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTLG 71
P P + L S+ P V L R+ P + + LPPA G R L + +G
Sbjct: 491 PQASPLAKPLQSSSPRVLGLPSRMEPPAPLSTSSTSQASALPPA----GRRNLAESSGVG 546
Query: 72 RVGGAAGPTQEAPAG-------PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
RVG + P EAP ++++ G+ R K R A
Sbjct: 547 RVGAGSRPKPEAPMAKGKSTTLTQDMSTSLQEGQEDGPAGWRANLKPVDRRSPAERTLKP 606
Query: 125 RDQRLAGCGRAGKRPGGPNPARAG----LSSPVWLVSSPLPSLP 164
++ R RAG+ P + + AG +PV +P P+ P
Sbjct: 607 KEPRALAEPRAGEAPRKVSGSFAGSVHITLTPVRPDRTPRPASP 650
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 37.4 bits (85), Expect = 0.006
Identities = 38/143 (26%), Positives = 45/143 (31%), Gaps = 39/143 (27%)
Query: 11 RPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTL 70
RPG P + P P P +PP P PP PG
Sbjct: 9 RPGESPGATPAPGPPPPPPP--------APPQQQPPPPPPPAPPPGPG------------ 48
Query: 71 GRVGGAAGPTQEAPAG----PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNRD 126
P Q P PE G RGR+R+ +P PG A P+
Sbjct: 49 ------PAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGE- 101
Query: 127 QRLAGCGRAGKR--PGGP-NPAR 146
CGR + P GP PAR
Sbjct: 102 -----CGRGEPQCSPAGPEGPAR 119
Score = 27.7 bits (60), Expect = 4.8
Identities = 37/122 (30%), Positives = 42/122 (34%), Gaps = 11/122 (9%)
Query: 34 RLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPG 93
RL R P P P A+ P PP G RA GG PA P
Sbjct: 756 RLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALP------ 809
Query: 94 TARGRVRA-EGYGRHQPKAPGGR--QAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLS 150
AR RA QP P G AA P++ G A R P+P R +
Sbjct: 810 -ARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAA-RAAAPSPDRRDSA 867
Query: 151 SP 152
SP
Sbjct: 868 SP 869
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 37.0 bits (84), Expect = 0.008
Identities = 39/142 (27%), Positives = 49/142 (34%), Gaps = 16/142 (11%)
Query: 7 GAKLRPGRPPSSAHLPSA----LPAVATLGGRLGVRVPFAPRPPASD---PLLPPAFPGW 59
G K P P A P A LP A+ R + P P +S P LPP P +
Sbjct: 274 GLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSF 333
Query: 60 GERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAP 119
+ G A P AP G + GR A G + P AP R
Sbjct: 334 QA-------PPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTT 386
Query: 120 AMPSNRDQRLAGCGRAGKRPGG 141
+ S Q A ++PGG
Sbjct: 387 ELSSKSQQ--ATAWTPTQQPGG 406
Score = 35.0 bits (79), Expect = 0.030
Identities = 46/180 (25%), Positives = 58/180 (32%), Gaps = 31/180 (17%)
Query: 1 MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG 60
+P K + L P P + A A T R V P P PP P LPP P
Sbjct: 135 LPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSS 194
Query: 61 ERWLGRAH-----TLGRVGGAAGPTQEAPAGPEEVTPGT----------ARGRVRAEGYG 105
T G + A P AP P P T + V+ +
Sbjct: 195 PIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAP 254
Query: 106 RHQPKAPGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
H P P P +P L CG G + +PA+ P +P P LPP
Sbjct: 255 LHLPPIP------PPLP-----LLPPCGYPGLKAEPASPAQDAQEPP-----APPPPLPP 298
Score = 28.1 bits (61), Expect = 3.7
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 40 PFAPRPPASDPLLPPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTP 92
P P S PL+PPA P G AH R A P PA P P
Sbjct: 133 PRLPNKTISGPLIPPASPRLGN--TSEAHGAAR---TAPPRPNVPAPPPPTPP 180
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 37.0 bits (84), Expect = 0.008
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 11 RPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTL 70
RP RPP H+P+ + G VP AP PA P + P P W ++ +
Sbjct: 271 RPTRPPEPRHIPANRGEIK--GSESATYVPVAPPTPAWQPEIKPE-PAWHDQDETSSVKS 327
Query: 71 GRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGR 106
GGA + G RGR R G GR
Sbjct: 328 DGAGGARASFR-----------GRGRGRGRGRGRGR 352
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 37.0 bits (84), Expect = 0.008
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 11 RPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTL 70
RP RPP H+P+ + G VP AP PA P + P P W ++ +
Sbjct: 194 RPTRPPEPRHIPANRGEIK--GSESATYVPVAPPTPAWQPEIKPE-PAWHDQDETSSVKS 250
Query: 71 GRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGR 106
GGA + G RGR R G GR
Sbjct: 251 DGAGGARASFR-----------GRGRGRGRGRGRGR 275
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 36.6 bits (83), Expect = 0.010
Identities = 38/127 (29%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 42 APRPPASDPLLPPAFPGWGERWLG---RAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGR 98
+P PP P G G RW G R L RV ++ P + PE + PG G
Sbjct: 57 SPPPPVGTGNAPARGSGAGSRWSGFKKRKQVLDRVFSSSQPNL-CCSSPEPLEPG---GA 112
Query: 99 VRAEGYGRHQPKAPGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSS 158
RAE Q R +P+ + A G PGG +P A SS S
Sbjct: 113 GRAE-----QGSTLRRRIREHLLPAVKGPAAASGAAGGTPPGGRSPDSAPSSSSASSSLS 167
Query: 159 PLPSLPP 165
P PP
Sbjct: 168 SSPQPPP 174
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 36.6 bits (83), Expect = 0.010
Identities = 43/151 (28%), Positives = 49/151 (32%), Gaps = 16/151 (10%)
Query: 2 PWKPVGAKLRPGR----PPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFP 57
P KP G + G PP P P GG P P P P P
Sbjct: 159 PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQ---GGNQSQGPPPRPGKPEGPP------P 209
Query: 58 GWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQA 117
G + G G+ G P GP PG +G EG +P PG Q
Sbjct: 210 QGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPP-HPGKPQGPPPQEGNKPQRPPPPGRPQG 268
Query: 118 APAMPSNRDQRLAGCGRAGKRPGGPNPARAG 148
P N Q L AGK G P P + G
Sbjct: 269 PPPPGGNPQQPLP--PPAGKPQGPPPPPQGG 297
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 36.6 bits (83), Expect = 0.010
Identities = 42/165 (25%), Positives = 51/165 (30%), Gaps = 46/165 (27%)
Query: 11 RPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTL 70
RP PP H P++ ++L G +P RP P
Sbjct: 1200 RPDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGP-------------------- 1239
Query: 71 GRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQRLA 130
G + EAP GP E G RG PG Q P S R L
Sbjct: 1240 ---GTSEHREMEAPGGPSEDRGGKGRG-------------GPGPAQRVPK--SGRSSSLD 1281
Query: 131 GCGRAGKR--------PGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
G G PG P+R G S W S + S PP +
Sbjct: 1282 GEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNSGPPRR 1326
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 36.2 bits (82), Expect = 0.013
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 26/165 (15%)
Query: 1 MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG 60
+P +P A R PPS+ P L + + RPP P+ PP P
Sbjct: 1103 LPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP 1162
Query: 61 ER------WLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGG 114
+R A T GG P +PG AR + A PK+PG
Sbjct: 1163 QRPPPPSGARSPAPTRKEFGGIGAPP----------SPGVARREMEA-------PKSPGT 1205
Query: 115 RQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSP 159
+ R Q G AG P G + AR + ++S+P
Sbjct: 1206 TRKDNI---GRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAP 1247
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 36.2 bits (82), Expect = 0.013
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 26/165 (15%)
Query: 1 MPWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWG 60
+P +P A R PPS+ P L + + RPP P+ PP P
Sbjct: 1103 LPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP 1162
Query: 61 ER------WLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGG 114
+R A T GG P +PG AR + A PK+PG
Sbjct: 1163 QRPPPPSGARSPAPTRKEFGGIGAPP----------SPGVARREMEA-------PKSPGT 1205
Query: 115 RQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSP 159
+ R Q G AG P G + AR + ++S+P
Sbjct: 1206 TRKDNI---GRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAP 1247
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 36.2 bits (82), Expect = 0.013
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 12/99 (12%)
Query: 75 GAAGPTQEAPAGPEEVT-------PGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQ 127
GA GPT APA P T P A G G QP A + A A+P+ +
Sbjct: 14 GAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMP 73
Query: 128 RLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPN 166
+ C P A AG +S P LPP+
Sbjct: 74 AFSSCFEVVSGAAAPASAAAGPPG-----ASCKPPLPPH 107
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.2 bits (82), Expect = 0.013
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 24/135 (17%)
Query: 14 RPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTLGR- 72
R + A + PA A G L R P +PRPP P+ P A R LG A +GR
Sbjct: 5 RDKAKAGAAARTPA-ARAPGLLTPRPPGSPRPPP--PVTPAAL-----RVLGAAGAVGRK 56
Query: 73 --------VGGAAGPTQEAPAGPEEVTPGTAR---GRVRAEGYGRHQPKAPGGRQAAPAM 121
+GGA P AGP ++R R A G G +AP + +P
Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGE---RAPPAKNTSPG- 112
Query: 122 PSNRDQRLAGCGRAG 136
P + R +G R G
Sbjct: 113 PVSSPGRASGTTRPG 127
Score = 30.8 bits (68), Expect = 0.56
Identities = 43/177 (24%), Positives = 59/177 (33%), Gaps = 14/177 (7%)
Query: 2 PWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFP---- 57
P PV A P P S PSA P + P PPAS P+ P A P
Sbjct: 444 PSPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 501
Query: 58 ----GWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEV---TPGTARGRVRAEGYGRHQPK 110
L + A P Q P+ P P + + P+
Sbjct: 502 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 561
Query: 111 APGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
AP AAP + + +A +RP P P + + L +P P PP++
Sbjct: 562 AP-PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 617
>gi|239755412 PREDICTED: hypothetical protein [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.013
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 16/82 (19%)
Query: 47 ASDPLLPPAFPGWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGR 106
A+ L+ P WG LG+AH R+GG+ P E P GPE V ++G R
Sbjct: 58 ANGALIAPLAQTWGHWRLGQAHW--RIGGSYLPPAELPRGPEL--------HVLSKGSDR 107
Query: 107 HQPKAPG------GRQAAPAMP 122
P+A G G Q + +P
Sbjct: 108 RLPRALGEVGVEAGEQGSDGIP 129
>gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo
sapiens]
Length = 1183
Score = 36.2 bits (82), Expect = 0.013
Identities = 39/120 (32%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 4 KPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERW 63
+P G +LR G SS P A GG R PR PA +P PP G +
Sbjct: 661 EPPGERLR-GESRSSGSGERG-PEEAPEGGAAAARGQ-RPRVPALEPPQPPRGLRKGAQE 717
Query: 64 LGRAHTLGRVGG---AAGPTQEAPAG-PEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAP 119
G+ T +V E+P G P T G G EG R P A GR A P
Sbjct: 718 PGKRPTFSKVTSFRKGRPLATESPGGVPAPTTEGRRWGSSGPEGLPRENPPAAAGRDAPP 777
>gi|239752588 PREDICTED: hypothetical protein XP_002348309, partial
[Homo sapiens]
Length = 327
Score = 36.2 bits (82), Expect = 0.013
Identities = 43/169 (25%), Positives = 58/169 (34%), Gaps = 19/169 (11%)
Query: 7 GAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLP--PAFPGWGER-- 62
GA+ P PS A + AT GG P P S P P P PG +
Sbjct: 116 GARAVPVLQPSGATPAEGISQPATAGGDFAYATPALPEGALSHPQAPRWPPNPGKSQEDR 175
Query: 63 -WLGRAHTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGR--------HQPKAPG 113
W G GP Q P G + P ++G + +GR +P+A
Sbjct: 176 DWQRDGLPSPCAVGQPGPAQAGPNGQSVLAPHASQGS-QWSAWGRGPQVVGAAWEPQAGA 234
Query: 114 GRQAAPAMPSN-----RDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVS 157
PA P + R Q + +A + PG +GL L S
Sbjct: 235 AAPHQPAPPESSAWQGRMQGIPASSQALREPGRLPALPSGLQLDELLAS 283
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.2 bits (82), Expect = 0.013
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 24/135 (17%)
Query: 14 RPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTLGR- 72
R + A + PA A G L R P +PRPP P+ P A R LG A +GR
Sbjct: 5 RDKAKAGAAARTPA-ARAPGLLTPRPPGSPRPPP--PVTPAAL-----RVLGAAGAVGRK 56
Query: 73 --------VGGAAGPTQEAPAGPEEVTPGTAR---GRVRAEGYGRHQPKAPGGRQAAPAM 121
+GGA P AGP ++R R A G G +AP + +P
Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGE---RAPPAKNTSPG- 112
Query: 122 PSNRDQRLAGCGRAG 136
P + R +G R G
Sbjct: 113 PVSSPGRASGTTRPG 127
Score = 35.4 bits (80), Expect = 0.023
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 5 PVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLL-----PPAFP 57
P G K RP PP +A P LPA L +P AP P++ P L PPA P
Sbjct: 309 PSGTKARPVPPPDNAATP--LPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATP 364
Score = 30.4 bits (67), Expect = 0.74
Identities = 42/155 (27%), Positives = 51/155 (32%), Gaps = 33/155 (21%)
Query: 12 PGRPPSSAHL-PSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTL 70
P PP+S + PSA P + P PPAS P+ P A P R L
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPP------PRVPPL 760
Query: 71 GRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQRLA 130
A P + P P P P A QA PA+ + Q L
Sbjct: 761 -----LAAPPLQVPPSPPASLP--------------MSPLAKPPPQAPPALATPPLQALP 801
Query: 131 GCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPP 165
P P +A S L SPL + PP
Sbjct: 802 S-------PPASFPGQAPFSPSASLPMSPLATPPP 829
Score = 29.3 bits (64), Expect = 1.6
Identities = 43/162 (26%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 12 PGRPPSSAHL-PSALPA--VATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAH 68
P PP+S + PSA P V L ++VP P PPAS P+ P A P
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPLQVP--PSPPASLPMSPLAKPP---------- 785
Query: 69 TLGRVGGAAGPTQEAPAGPEEV---TPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNR 125
A P Q P+ P P + + P+AP AAP +
Sbjct: 786 PQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL-AAPLLQVPP 844
Query: 126 DQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
+ +A +RP P P + + L +P P PP++
Sbjct: 845 SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 886
Score = 28.9 bits (63), Expect = 2.1
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 2 PWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFP 57
P PV A P P S PSA P + P PPAS P+ P A P
Sbjct: 669 PSPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 722
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 36.2 bits (82), Expect = 0.013
Identities = 51/165 (30%), Positives = 65/165 (39%), Gaps = 25/165 (15%)
Query: 16 PSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDP------LLPPAFPGWGERWLGRAHT 69
PS+A L +A P A + VP A RPPA+ P + PA L A
Sbjct: 127 PSAASLCAASPPAA-----VPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
Query: 70 LGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSNRDQRL 129
L V AA P APA V PG A G A QP A A+PA +
Sbjct: 182 LAAVPAAASPAAVAPAA---VCPGAA-GPSAASLCAASQPAAVPA-AASPAAAAPLAVNP 236
Query: 130 AGCGRAGKRPG-------GPNPAR-AGLSSPVWLVSSPLP-SLPP 165
A RA P +PA ++ PV +P+P ++PP
Sbjct: 237 AAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.013
Identities = 42/132 (31%), Positives = 53/132 (40%), Gaps = 27/132 (20%)
Query: 14 RPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGWGERWLGRAHTLGR- 72
R + A + PA A G L R P +PRPP P+ P A R LG A +GR
Sbjct: 5 RDKAKAGAAARTPA-ARAPGLLTPRPPGSPRPPP--PVTPAAL-----RVLGAAGAVGRK 56
Query: 73 --------VGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAMPSN 124
+GGA P AGP T R A G G +AP + +P P +
Sbjct: 57 PLAERAGGIGGATIPESAPRAGP------TRTSRPPASGRGE---RAPPAKNTSPG-PVS 106
Query: 125 RDQRLAGCGRAG 136
R +G R G
Sbjct: 107 SPGRASGTTRPG 118
Score = 30.8 bits (68), Expect = 0.56
Identities = 43/177 (24%), Positives = 59/177 (33%), Gaps = 14/177 (7%)
Query: 2 PWKPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFP---- 57
P PV A P P S PSA P + P PPAS P+ P A P
Sbjct: 405 PSPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Query: 58 ----GWGERWLGRAHTLGRVGGAAGPTQEAPAGPEEV---TPGTARGRVRAEGYGRHQPK 110
L + A P Q P+ P P + + P+
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 522
Query: 111 APGGRQAAPAMPSNRDQRLAGCGRAGKRPGGPNPARAGLSSPVWLVSSPLPSLPPNK 167
AP AAP + + +A +RP P P + + L +P P PP++
Sbjct: 523 AP-PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 578
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 36.2 bits (82), Expect = 0.013
Identities = 36/102 (35%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 7 GAKLRP--GRPPSSAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLL-------PPAFP 57
G + RP GRP S A P A A R G + APR A L PAF
Sbjct: 1333 GGQGRPEAGRPASEARAPGLAAADAADAARAGGKE--APRAAAGSELCRREGPGAAPAFA 1390
Query: 58 GWGERWLGRAHTLGRVGGAAGPTQ------EAPAGPEEVTPG 93
G G G GR G AGP APA V PG
Sbjct: 1391 GPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPG 1432
Score = 35.8 bits (81), Expect = 0.018
Identities = 50/150 (33%), Positives = 59/150 (39%), Gaps = 9/150 (6%)
Query: 22 PSALPAVATLGGRLGVRVPFAPRPP-ASDPLLPPAFPGWGERWLGRAHTLGRVGG--AAG 78
P L A RLG + + P A+ P L A G G GR + R G AA
Sbjct: 1297 PKELSACGQKKQRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAAD 1356
Query: 79 PTQEAPAGPEEVTPGTARGRV-RAEGYGRHQPKA-PGGRQAAPAMPSNRDQRLAGCGRAG 136
A AG +E A + R EG G A PGG + R AG R G
Sbjct: 1357 AADAARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAG-PRPG 1415
Query: 137 KRPGGPNPARAGLSSP-VWLV--SSPLPSL 163
RP G PAR +P W V S LPS+
Sbjct: 1416 PRPPGGAPARKAAVAPGPWKVPGSDKLPSV 1445
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.137 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,225,488
Number of Sequences: 37866
Number of extensions: 676286
Number of successful extensions: 3809
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 598
Number of HSP's that attempted gapping in prelim test: 3256
Number of HSP's gapped (non-prelim): 1094
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.