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Search of human proteins with 166851804
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|166851804 tudor domain containing 9 [Homo sapiens]
(1382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|166851804 tudor domain containing 9 [Homo sapiens] 2761 0.0
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 313 9e-85
gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo sapi... 309 1e-83
gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapi... 304 4e-82
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 299 1e-80
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 288 2e-77
gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo sapi... 271 3e-72
gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ... 267 5e-71
gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ... 267 5e-71
gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo sapi... 251 4e-66
gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo sapi... 246 1e-64
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 239 1e-62
gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po... 228 4e-59
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 223 1e-57
gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapi... 221 3e-57
gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo sapi... 220 6e-57
gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo sapi... 211 5e-54
gi|38505213 YTH domain containing 2 [Homo sapiens] 149 1e-35
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 123 1e-27
gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom... 114 8e-25
gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... 73 2e-12
gi|169163653 PREDICTED: similar to tudor domain containing 1 [Ho... 59 4e-08
gi|169164192 PREDICTED: similar to tudor domain containing 1 [Ho... 59 4e-08
gi|169163210 PREDICTED: similar to tudor domain containing 1 [Ho... 59 4e-08
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 57 1e-07
gi|145312246 tudor and KH domain containing isoform b [Homo sapi... 57 1e-07
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 57 1e-07
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 57 1e-07
gi|58197558 tudor domain containing 6 [Homo sapiens] 56 2e-07
gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens] 56 3e-07
>gi|166851804 tudor domain containing 9 [Homo sapiens]
Length = 1382
Score = 2761 bits (7158), Expect = 0.0
Identities = 1382/1382 (100%), Positives = 1382/1382 (100%)
Query: 1 MLRKLTIEQINDWFTIGKTVTNVELLGAPPAFPAGAAREEVQRQDVAPGAGPAAQAPALA 60
MLRKLTIEQINDWFTIGKTVTNVELLGAPPAFPAGAAREEVQRQDVAPGAGPAAQAPALA
Sbjct: 1 MLRKLTIEQINDWFTIGKTVTNVELLGAPPAFPAGAAREEVQRQDVAPGAGPAAQAPALA 60
Query: 61 QAPARPAAAFERSLSQRSSEVEYINKYRQLEAQELDVCRSVQPTSGPGPRPSLAKLSSVT 120
QAPARPAAAFERSLSQRSSEVEYINKYRQLEAQELDVCRSVQPTSGPGPRPSLAKLSSVT
Sbjct: 61 QAPARPAAAFERSLSQRSSEVEYINKYRQLEAQELDVCRSVQPTSGPGPRPSLAKLSSVT 120
Query: 121 CIPGTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYC 180
CIPGTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYC
Sbjct: 121 CIPGTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYC 180
Query: 181 SIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIV 240
SIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIV
Sbjct: 181 SIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIV 240
Query: 241 SAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA 300
SAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA
Sbjct: 241 SAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA 300
Query: 301 VPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLI 360
VPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLI
Sbjct: 301 VPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLI 360
Query: 361 QMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHS 420
QMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHS
Sbjct: 361 QMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHS 420
Query: 421 SVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSL 480
SVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSL
Sbjct: 421 SVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSL 480
Query: 481 RLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKL 540
RLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKL
Sbjct: 481 RLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKL 540
Query: 541 LDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQ 600
LDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQ
Sbjct: 541 LDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQ 600
Query: 601 LPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSD 660
LPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSD
Sbjct: 601 LPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSD 660
Query: 661 CIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMH 720
CIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMH
Sbjct: 661 CIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMH 720
Query: 721 VDSRRPVMDQEYIYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRELAGKDPKTTVVLKH 780
VDSRRPVMDQEYIYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRELAGKDPKTTVVLKH
Sbjct: 721 VDSRRPVMDQEYIYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRELAGKDPKTTVVLKH 780
Query: 781 IPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVYMAIKMSQLK 840
IPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVYMAIKMSQLK
Sbjct: 781 IPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVYMAIKMSQLK 840
Query: 841 VSLELSVHSAEEIEGKVQGMNVSKLRNTRVNVDFQKQTVDPMQVSFNTSDRSQTVTDLLL 900
VSLELSVHSAEEIEGKVQGMNVSKLRNTRVNVDFQKQTVDPMQVSFNTSDRSQTVTDLLL
Sbjct: 841 VSLELSVHSAEEIEGKVQGMNVSKLRNTRVNVDFQKQTVDPMQVSFNTSDRSQTVTDLLL 900
Query: 901 TIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDK 960
TIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDK
Sbjct: 901 TIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDK 960
Query: 961 QRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSA 1020
QRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSA
Sbjct: 961 QRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSA 1020
Query: 1021 KSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQ 1080
KSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQ
Sbjct: 1021 KSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQ 1080
Query: 1081 QGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL 1140
QGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL
Sbjct: 1081 QGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL 1140
Query: 1141 GTPNCKAELHGPFNPYELKCHSLTRISKFRCVWIEKESINSVIISDAPEDLHQRMLVAAS 1200
GTPNCKAELHGPFNPYELKCHSLTRISKFRCVWIEKESINSVIISDAPEDLHQRMLVAAS
Sbjct: 1141 GTPNCKAELHGPFNPYELKCHSLTRISKFRCVWIEKESINSVIISDAPEDLHQRMLVAAS 1200
Query: 1201 LSINATGSTMLLRETSLMPHIPGLPALLSMLFAPVIELRIDQNGKYYTGVLCGLGWNPAT 1260
LSINATGSTMLLRETSLMPHIPGLPALLSMLFAPVIELRIDQNGKYYTGVLCGLGWNPAT
Sbjct: 1201 LSINATGSTMLLRETSLMPHIPGLPALLSMLFAPVIELRIDQNGKYYTGVLCGLGWNPAT 1260
Query: 1261 GASILPEHDMELAFDVQFSVEDVVEVNILRAAINKLVCDGPNGCKCLGPERVAQLQDIAR 1320
GASILPEHDMELAFDVQFSVEDVVEVNILRAAINKLVCDGPNGCKCLGPERVAQLQDIAR
Sbjct: 1261 GASILPEHDMELAFDVQFSVEDVVEVNILRAAINKLVCDGPNGCKCLGPERVAQLQDIAR 1320
Query: 1321 QKLLGLFCQSKPREKIVPKWHEKPYEWNQVDPKLVMEQADRESSRGKNTFLYQLHKLVVL 1380
QKLLGLFCQSKPREKIVPKWHEKPYEWNQVDPKLVMEQADRESSRGKNTFLYQLHKLVVL
Sbjct: 1321 QKLLGLFCQSKPREKIVPKWHEKPYEWNQVDPKLVMEQADRESSRGKNTFLYQLHKLVVL 1380
Query: 1381 GT 1382
GT
Sbjct: 1381 GT 1382
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 313 bits (801), Expect = 9e-85
Identities = 209/652 (32%), Positives = 349/652 (53%), Gaps = 92/652 (14%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQR--SAYCSIVVTQPRK 189
LP +E +++L+ + VV+I G TG GK+TQ+PQ+ILD + +I+ TQPR+
Sbjct: 544 LPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRR 603
Query: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
I A S+A ++KERA +G VGYQ+ LE + + TRL+Y TTGVLL+++ +L +
Sbjct: 604 ISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVS 663
Query: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
HII+DEVHERTEE DFLLLV++ ++ ++V+LMSAT++ + F+DYF N
Sbjct: 664 HIIVDEVHERTEESDFLLLVLKDIVSQRPG-LQVILMSATLNAELFSDYF--------NS 714
Query: 310 AYIFEVEGKPHSVEEY------------------YLNDLEHIHHSKL------------- 338
+ + G+ V+++ Y+ ++ I KL
Sbjct: 715 CPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVE 774
Query: 339 -----SPHLLEEPVITKDIYE--------------VAVSLIQMFDDLDMKESGNKAWSGA 379
S HL ++ + + + V+ S+I+ +D ++ +
Sbjct: 775 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEAL 834
Query: 380 -QFVLERS------SVLVFLPGLGEINYMHELL--TSLVHKRLQ----VYPLHSSVALEE 426
+++++ ++LVFLPGL EI ++E L SL + R ++PLHSS++ EE
Sbjct: 835 LEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEE 894
Query: 427 QNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWAS 486
Q VF+ P G KII+STNIAE+S+T+ DV YVID + D +SL ++ S
Sbjct: 895 QQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVS 954
Query: 487 KTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEP 546
+ + QRKGRAGRV+ G C+ L +++ + +PE+ R PL L++K+L+M
Sbjct: 955 QANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSA 1014
Query: 547 ---RALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPV 603
+++ + + PP + + + L+++GAL D LT LG LA LPV
Sbjct: 1015 HNLQSVFSRLIEPPHTDSLRASKIRLRDLGALT----------PDERLTPLGYHLASLPV 1064
Query: 604 NQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIA 663
+ ++GKL++ G +F CLD L IAA+L+ K+ F P+ + + + K+ F+ + SD +A
Sbjct: 1065 DVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFA-FANSDYLA 1123
Query: 664 LVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRIS 715
L++A+K W+ + G + N+ R N++ + ++E+A L + +S
Sbjct: 1124 LLQAYKGWQLSTKEG----VRASYNYCRQNFLSGRVLQEMASLKRQFTELLS 1171
>gi|100913206 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Homo
sapiens]
Length = 1270
Score = 309 bits (791), Expect = 1e-83
Identities = 214/572 (37%), Positives = 307/572 (53%), Gaps = 50/572 (8%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPRK 189
LP+ +++ E++ I NSVVII GATG GK+TQ+PQ+ILD ++Q R+A C+IVVTQPR+
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 447
Query: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATED-TRLIYMTTGVLLQKIVSAKSLMEF 248
I A S+A ++ ER G GY V E I +++ T GVLL+K+ + +
Sbjct: 448 ISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGI 505
Query: 249 THIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMN 308
+H+I+DE+HER DFLL+V+R +++ V++VLMSATI F +YF
Sbjct: 506 SHVIVDEIHERDINTDFLLVVLRDVVQAYPE-VRIVLMSATIDTSMFCEYFF-------- 556
Query: 309 PAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEP---------------VITKDIY 353
I EV G+ + V+EY+L D + H P ++ +I D Y
Sbjct: 557 NCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEY 616
Query: 354 --EVAVSLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVH- 410
E +S+ Q+ + E + + +VLVFLPG I M + L H
Sbjct: 617 GPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHF 676
Query: 411 --KRLQVYPLHSSVALEEQNNVFLSPVP-GYRKIILSTNIAESSVTVPDVKYVIDFCLTR 467
R Q+ PLHS + EEQ VF PVP G K+ILSTNIAE+S+T+ DV YVID C +
Sbjct: 677 GSHRYQILPLHSQIPREEQRKVF-DPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQK 735
Query: 468 TLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEML 527
+ N + WASKT+ QRKGRAGRV G+C+ L + ++ + H+ PEM
Sbjct: 736 VKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMF 794
Query: 528 RCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPH 587
R PL L +KLL +G LA A+ PP L + L+E+ AL D N
Sbjct: 795 RTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDAL-------DAN-- 845
Query: 588 DGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGY 647
ELT LGR+LA+LP+ + GK++++G +F D IAAA F ++ GY
Sbjct: 846 -DELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKRL--GY 902
Query: 648 RNKVNFSGSSKSDCIALVEAFKTWKACRQTGE 679
++ NF+G+ SD +AL+ F+ W R GE
Sbjct: 903 IHR-NFAGNRFSDHVALLSVFQAWDDARMGGE 933
>gi|67782362 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Homo sapiens]
Length = 1369
Score = 304 bits (778), Expect = 4e-82
Identities = 209/683 (30%), Positives = 352/683 (51%), Gaps = 90/683 (13%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQR---SAYCSIVVTQPR 188
LP+ ++++ +V ++ + VV++ G TGSGKSTQ+P ++L+ + ++ C+IV TQPR
Sbjct: 572 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPR 631
Query: 189 KIGASSIARWISKERAWTLG-----GVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAK 243
+I A S+A + E G + GYQ+ +E A E TRL+Y TTGVLL+K+
Sbjct: 632 RISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDG 691
Query: 244 SLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPV 303
L +H+I+DEVHER+ + DFLL++++++L+ S + ++LMSAT+ ++F+ YF
Sbjct: 692 LLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSD-LHLILMSATVDSEKFSTYFT--- 747
Query: 304 QNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPH-------LLEEPVITKDIYEVA 356
I + G+ + VE ++L D+ L L EE +T ++ A
Sbjct: 748 -----HCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKA 802
Query: 357 VSL--------IQMFDDLDMKESGNKAWSGAQ--------------FVLE---------- 384
+ +Q D+ K S Q +LE
Sbjct: 803 GGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQ 862
Query: 385 ----RSSVLVFLPGLGEINYMHELLTS---LVHKRLQVYPLHSSVALEEQNNVFLSPVPG 437
+VL+FLPGL I +++LL++ +R +V LHS ++ ++Q F P PG
Sbjct: 863 FRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPG 922
Query: 438 YRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRA 497
RKI+L+TNIAE+ +T+PDV +VID T+ E + SL ++ SK S QR+GRA
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 982
Query: 498 GRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPP 557
GRV G+C+R+ ++ ++ + D+ VPE+LR PL L + ++G P L+ AL PP
Sbjct: 983 GRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPP 1041
Query: 558 GLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVF 617
L I + LL+++GA + ++ +LT LG+ LA LPVN ++GK+++ G +F
Sbjct: 1042 QLQVISNAMNLLRKIGACEL---------NEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
Query: 618 GCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGS----SKSDCIALVEAFKTWKA 673
GCLD +AA ++ K+ F P G +++ + + S + SD + + A+ WK
Sbjct: 1093 GCLDPVATLAAVMTEKSPFTTPI-----GRKDEADLAKSALAMADSDHLTIYNAYLGWKK 1147
Query: 674 CRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMHVDSRRPVMD---- 729
RQ G R E+ + R N++ + + ++ +EL + + +
Sbjct: 1148 ARQEGGYR---SEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRA 1204
Query: 730 -QEYIYKQRFILQVVLAGAFYPN 751
Q +++ +L+ VL Y N
Sbjct: 1205 SQTLSFQEIALLKAVLVAGLYDN 1227
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 299 bits (766), Expect = 1e-80
Identities = 203/596 (34%), Positives = 318/596 (53%), Gaps = 65/596 (10%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRS--AYCSIVVTQPRK 189
LP ++E+V+LI+++ V +I G TG GK+TQ+ Q+ILD+Y++R + C IV TQPR+
Sbjct: 207 LPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR 266
Query: 190 IGASSIARWISKERAWTLGG--VVGYQVGLE-KIATEDTRLIYMTTGVLLQKIVSAKSLM 246
I A S+A ++ ERA + G GYQ+ L+ ++ + ++Y TTG++LQ + S L
Sbjct: 267 ISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLS 326
Query: 247 EFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNK 306
+HI++DE+HER + D L+ VV+ LL S +KV+LMSAT++ ++F++YF
Sbjct: 327 SVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSD-LKVILMSATLNAEKFSEYFG------ 379
Query: 307 MNPAYIFEVEGKPHSVEEYYLNDL---------EHIHHSKLSPHLLEEPVITKD------ 351
+ + G V EY L D+ + H S+ ++ V ++
Sbjct: 380 --NCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEA 437
Query: 352 IYEV----------------AVSLIQMFDDLDMKESGNKAWSGAQFVL---ERSSVLVFL 392
IY+ V +I+M +D K N + ++++ E ++LVFL
Sbjct: 438 IYKERWPDYVRELRRRYSASTVDVIEMMED--DKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 393 PGLGEINYMHELLTSLV---HKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAE 449
PG I+ +H+LL S V + + PLHS + Q VF PG RKI+++TNIAE
Sbjct: 496 PGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAE 555
Query: 450 SSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLV 509
+S+T+ DV YVID + D N ++ W SK + QRKGRAGRV G+CY L
Sbjct: 556 TSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL- 614
Query: 510 HKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLL 569
+ + + D+ +PE+LR PL L++K+L +G L+ + PP + +I L
Sbjct: 615 YNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHL 674
Query: 570 KEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAA 629
E+ AL ELT LG LA+LPV +GK+I+ G +F CLD L IAA+
Sbjct: 675 MELNAL----------DKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 724
Query: 630 LSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKD 685
LS K+ F +P + + + ++SD + +V AF+ W+ R+ G RY KD
Sbjct: 725 LSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRG-FRYEKD 779
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 288 bits (738), Expect = 2e-77
Identities = 201/593 (33%), Positives = 314/593 (52%), Gaps = 73/593 (12%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRS--AYCSIVVTQPRK 189
LP ++E+V+LI+++ V +I G TG GK+TQ+ Q+ILD+Y++R + C IV TQPR+
Sbjct: 207 LPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR 266
Query: 190 IGASSIARWISKERAWTLGG--VVGYQVGLE-KIATEDTRLIYMTTGVLLQKIVSAKSLM 246
I A S+A ++ ERA + G GYQ+ L+ ++ + ++Y TTG++LQ + S L
Sbjct: 267 ISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLS 326
Query: 247 EFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNK 306
+HI++DE+HER + D L+ VV+ LL S +KV+LMSAT++ ++F++YF
Sbjct: 327 SVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSD-LKVILMSATLNAEKFSEYFG------ 379
Query: 307 MNPAYIFEVEGKPHSVEEYYLNDL---------EHIHHSKLSPHLLEEPVITKD------ 351
+ + G V EY L D+ + H S+ ++ V ++
Sbjct: 380 --NCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEA 437
Query: 352 IYEV----------------AVSLIQMFDDLDMKESGNKAWSGAQFVL---ERSSVLVFL 392
IY+ V +I+M +D K N + ++++ E ++LVFL
Sbjct: 438 IYKERWPDYVRELRRRYSASTVDVIEMMED--DKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 393 PGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSV 452
PG I+ +H+LL S V + SV Q VF PG RKI+++TNIAE+S+
Sbjct: 496 PGWDNISTLHDLLMSQV--------MFKSV---NQTQVFKRTPPGVRKIVIATNIAETSI 544
Query: 453 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKD 512
T+ DV YVID + D N ++ W SK + QRKGRAGRV G+CY L +
Sbjct: 545 TIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL-YNG 603
Query: 513 FWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEV 572
+ + D+ +PE+LR PL L++K+L +G L+ + PP + +I L E+
Sbjct: 604 LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMEL 663
Query: 573 GALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSL 632
AL ELT LG LA+LPV +GK+I+ G +F CLD L IAA+LS
Sbjct: 664 NAL----------DKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 713
Query: 633 KNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKD 685
K+ F +P + + + ++SD + +V AF+ W+ R+ G RY KD
Sbjct: 714 KDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRG-FRYEKD 765
>gi|38158022 DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Homo
sapiens]
Length = 1143
Score = 271 bits (693), Expect = 3e-72
Identities = 188/603 (31%), Positives = 305/603 (50%), Gaps = 57/603 (9%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
LPI++Y ++ ++ + VV++ G TG GKSTQ+PQY+L + + + TQPR+I
Sbjct: 162 LPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL-----AAGFSHVACTQPRRIA 216
Query: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHI 251
S+A+ + E G VGYQ+ E + T+++++T G+LL++I SL ++ +
Sbjct: 217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVL 276
Query: 252 IIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPAY 311
I+DEVHER DFLL V+++LL T +KV+LMSATI+ F+ YF+ A
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPTRPD-LKVILMSATINISLFSSYFS--------NAP 327
Query: 312 IFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDDLDMKES 371
+ +V G+ + Y EP +K +++ + +D K
Sbjct: 328 VVQVPGRLFPITVVYQPQEA-------------EPTTSKSEKLDPRPFLRVLESIDHKYP 374
Query: 372 GNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVH--KRLQVYPLHSSVALEEQNN 429
ER +LVFL G+ EI+ + E + +R V PLHS++++ +Q+
Sbjct: 375 PE----------ERGDLLVFLSGMAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDK 424
Query: 430 VFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTS 489
VF PG RK ILSTNIAE+SVT+ +++V+D + + D Q L+ W S+ S
Sbjct: 425 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 484
Query: 490 CNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRAL 549
QRKGRAGR G C+RL + +D P + VPE+ R L S +L++K + +G+PR
Sbjct: 485 AEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDSLVLQMKSMSVGDPRTF 543
Query: 550 LATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGK 609
+ PP + +E IL L++ GAL S LT +G +LAQLPV+ +GK
Sbjct: 544 --PFIEPPPPASLETAILYLRDQGALDSS----------EALTPIGSLLAQLPVDVVIGK 591
Query: 610 LIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFK 669
+++LG +F ++ L IAAALS+++ F + + + S + D L F
Sbjct: 592 MLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLE-SDQGDPFTLFNVFN 650
Query: 670 TWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMHVDSRRPVMD 729
W + ++ W R I+ R+ E+A L + K + + ++ +
Sbjct: 651 AWVQVKS----ERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVG 706
Query: 730 QEY 732
Y
Sbjct: 707 DSY 709
>gi|20336290 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2
[Homo sapiens]
Length = 1155
Score = 267 bits (683), Expect = 5e-71
Identities = 182/562 (32%), Positives = 296/562 (52%), Gaps = 65/562 (11%)
Query: 130 PDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQP 187
P LP+ +++ +++ IE + VV+I G TG GK+T++PQ +L+ YV R A C++++TQP
Sbjct: 393 PQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQP 452
Query: 188 RKIGASSIARWISKERAWTLGGVVGYQVGLE-KIATEDTRLIYMTTGVLLQKIVSAKSLM 246
R+I A S+A+ +S E +L VG+QV LE K + L++ T G+LL+K+ S SL
Sbjct: 453 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLE 512
Query: 247 EFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNK 306
+H+I+DEVHER DFLL++++ L R N +++VLMSAT + F+ YF
Sbjct: 513 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFG------ 565
Query: 307 MNPAYIFEVEGKPHSVEEYYLNDL-----------EHIHHSKLSPHLLEEPVITKDIYEV 355
+ +V G + V+E+YL D+ H HH L+ ++T + +
Sbjct: 566 --GCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHI 623
Query: 356 AVSLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLV---HKR 412
D + E +L FLPG EI + + L + +
Sbjct: 624 -----------DARG-------------EPGGILCFLPGWQEIKGVQQRLQEALGMHESK 659
Query: 413 LQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCD 472
+ P+HS++ + +Q +F P G RKI+L+TNIAE+S+T+ D+ +V+D L + D
Sbjct: 660 YLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYD 719
Query: 473 EDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLG 532
T L W S+ + QR+GRAGR G+ Y L + + +P VPE+LR PL
Sbjct: 720 LKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLE 778
Query: 533 STILKVKLLDMGEPRAL--LATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGE 590
+ +L+ K + M E A+ L+ A+ P + ++ ++LL+E+G L QRE
Sbjct: 779 NLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL---DQRE-------Y 827
Query: 591 LTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNK 650
LT LG+ LA + + +L K IVL +F CL L++ + L+ ++ F+ + + + K
Sbjct: 828 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 886
Query: 651 VNFSGSSKSDCIALVEAFKTWK 672
S S SD +A V A W+
Sbjct: 887 ALLSHDSGSDHLAFVRAVAGWE 908
>gi|20336294 DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1
[Homo sapiens]
Length = 1194
Score = 267 bits (683), Expect = 5e-71
Identities = 182/562 (32%), Positives = 296/562 (52%), Gaps = 65/562 (11%)
Query: 130 PDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQP 187
P LP+ +++ +++ IE + VV+I G TG GK+T++PQ +L+ YV R A C++++TQP
Sbjct: 432 PQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQP 491
Query: 188 RKIGASSIARWISKERAWTLGGVVGYQVGLE-KIATEDTRLIYMTTGVLLQKIVSAKSLM 246
R+I A S+A+ +S E +L VG+QV LE K + L++ T G+LL+K+ S SL
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLE 551
Query: 247 EFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNK 306
+H+I+DEVHER DFLL++++ L R N +++VLMSAT + F+ YF
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFG------ 604
Query: 307 MNPAYIFEVEGKPHSVEEYYLNDL-----------EHIHHSKLSPHLLEEPVITKDIYEV 355
+ +V G + V+E+YL D+ H HH L+ ++T + +
Sbjct: 605 --GCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHI 662
Query: 356 AVSLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLV---HKR 412
D + E +L FLPG EI + + L + +
Sbjct: 663 -----------DARG-------------EPGGILCFLPGWQEIKGVQQRLQEALGMHESK 698
Query: 413 LQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCD 472
+ P+HS++ + +Q +F P G RKI+L+TNIAE+S+T+ D+ +V+D L + D
Sbjct: 699 YLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYD 758
Query: 473 EDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLG 532
T L W S+ + QR+GRAGR G+ Y L + + +P VPE+LR PL
Sbjct: 759 LKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLE 817
Query: 533 STILKVKLLDMGEPRAL--LATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGE 590
+ +L+ K + M E A+ L+ A+ P + ++ ++LL+E+G L QRE
Sbjct: 818 NLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL---DQRE-------Y 866
Query: 591 LTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNK 650
LT LG+ LA + + +L K IVL +F CL L++ + L+ ++ F+ + + + K
Sbjct: 867 LTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK 925
Query: 651 VNFSGSSKSDCIALVEAFKTWK 672
S S SD +A V A W+
Sbjct: 926 ALLSHDSGSDHLAFVRAVAGWE 947
>gi|20336302 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [Homo
sapiens]
Length = 707
Score = 251 bits (640), Expect = 4e-66
Identities = 187/632 (29%), Positives = 310/632 (49%), Gaps = 77/632 (12%)
Query: 106 GPGPRPSLAKLSSVTCIPGTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQL 165
G +P LA+ S+ + LPI + + ++++ + + ++ G TGSGK+TQ+
Sbjct: 48 GRRQQPPLAQPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQI 107
Query: 166 PQYILDHYVQRSAYCSIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDT 225
PQY+ + + R I VTQPR++ A S+A +S E+ LG +VGY V + + +EDT
Sbjct: 108 PQYLYEGGISRQGI--IAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDT 165
Query: 226 RLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRF----V 281
R+ ++T G+LL++ +S L +++ +I+DE HERT D L VV+ + +
Sbjct: 166 RIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPL 225
Query: 282 KVVLMSATISCKEFADYFAVPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPH 341
KV++MSAT+ F+ YF N A + +EG+ H ++ +Y ++ +
Sbjct: 226 KVIVMSATMDVDLFSQYF--------NGAPVLYLEGRQHPIQVFYTKQPQNDY------- 270
Query: 342 LLEEPVITKDIYEVAVSLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYM 401
++ VS+ Q+ + + +LVFL G EI M
Sbjct: 271 ----------LHAALVSVFQIHQEAPSSQD----------------ILVFLTGQEEIEAM 304
Query: 402 HELLTSLVHK------RLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVP 455
+ + + V PL++S+ +Q VF GYRK+I+STNIAE+S+T+
Sbjct: 305 SKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITIT 364
Query: 456 DVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWD 515
+KYV+D + + + D+ + L + SKT QR GRAGR G CYRL +D ++
Sbjct: 365 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 424
Query: 516 NSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGAL 575
VPE+ RC L S +L +LL M P L +S P I+ I L +GAL
Sbjct: 425 -KFDKMTVPEIQRCNLASVML--QLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGAL 481
Query: 576 AVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNF 635
++D+ LT +GR +A P+ + K I++ F C +E L I + LS+ +
Sbjct: 482 E---HKDDQL----TLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSV 534
Query: 636 FAMP--FRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLN 693
P R+ + G R K SS+ D + L+ ++T+K L KD W + N
Sbjct: 535 LHNPPSRREEVQGVRKKFI---SSEGDHMTLLNIYRTFK------NLGGNKD---WCKEN 582
Query: 694 YIQIKRIREVAELYEELKTRISQFNMHVDSRR 725
++ K + VAE+ +L+ + +M + S R
Sbjct: 583 FVNSKNMTLVAEVRAQLRDICLKMSMPIASSR 614
>gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo
sapiens]
Length = 779
Score = 246 bits (627), Expect = 1e-64
Identities = 171/523 (32%), Positives = 276/523 (52%), Gaps = 50/523 (9%)
Query: 124 GTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIV 183
GTT P PI + +++++ + NS +I+ G TGSGK+TQLP+Y+ + S + I
Sbjct: 48 GTT---PTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYE--AGFSQHGMIG 102
Query: 184 VTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAK 243
VTQPRK+ A S+A+ +++E TLG VGYQV + ++++T + YMT G LL+ I+
Sbjct: 103 VTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP 162
Query: 244 SLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNS----RFVKVVLMSATISCKEFADYF 299
+L +F+ II+DE HERT D L +++KL + S +KVV+MSAT+ + + +F
Sbjct: 163 NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Query: 300 AVPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVA--V 357
IF++ G+ + V E + N + P E + I EV +
Sbjct: 223 G--------NCPIFDIPGRLYPVREKFCN--------LIGPRDRENTAYIQAIVEVTMDI 266
Query: 358 SLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYP 417
L +M D+ + +G QF +E+S L+F ++Y +++ + + L + P
Sbjct: 267 HLNEMAGDILVFLTG-------QFEIEKSCELLFQMA-ESVDYDYDVQDTTLDGLL-ILP 317
Query: 418 LHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNY 477
+ S+ ++Q +FL P PG RK ++STNI+ +S+T+ ++YV+D + L +
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 478 QSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILK 537
L + SK+ QR GRAGR S G C+R+ KDFW+ +PDHV+PE+ R L S +L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 538 VKLLDMGEPRALLATALSPPGLSDIERTIL-LLKEVGALAVSGQREDENPHDGELTFLGR 596
+K L + + + L PP ER IL LK++ + D G +T LG
Sbjct: 438 LKCLAIHD--VIRFPYLDPPN----ERLILEALKQL-------YQCDAIDRSGHVTRLGL 484
Query: 597 VLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 639
+ + P+ L ++ C D L IAA LS++N F P
Sbjct: 485 SMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRP 527
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 239 bits (610), Expect = 1e-62
Identities = 182/633 (28%), Positives = 304/633 (48%), Gaps = 97/633 (15%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDH-YVQRSAYCSIVVTQPRKI 190
LP+ ++EE+++ I ++ V+II G TGSGK+TQ+PQY+ + Y + I TQPR++
Sbjct: 399 LPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM--KIACTQPRRV 456
Query: 191 GASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTH 250
A S+A +++E LG VGY + E +E T L YMT G+LL++ +S L ++
Sbjct: 457 AAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 516
Query: 251 IIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPA 310
+++DE HERT D L +++ + R +KV++ SAT+ F+ +F + A
Sbjct: 517 VMVDEAHERTLHTDILFGLIKDVARFRPE-LKVLVASATMDTARFSTFF--------DDA 567
Query: 311 YIFEVEGKPHSVEEYYLND-----LEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDD 365
+F + G+ V+ +Y LE S L H+ + P
Sbjct: 568 PVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPP------------------- 608
Query: 366 LDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHK------RLQVYPLH 419
+LVFL G EI E+L + L V P++
Sbjct: 609 --------------------GDILVFLTGQEEIEAACEMLQDPCRRLGSKIRELLVLPIY 648
Query: 420 SSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVID--FCLTRTLVCDEDTNY 477
+++ + Q +F PG RK++++TNIAE+S T+ + YV+D FC ++ + T
Sbjct: 649 ANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPGFCKQKSY--NPRTGM 706
Query: 478 QSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILK 537
+SL ++ SK S NQR GRAGRV+ G C+RL + + + + VPE+ R LG+ +L
Sbjct: 707 ESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLL 766
Query: 538 VKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRV 597
+K L + + + L PP + T+ L +GAL H GELT GR
Sbjct: 767 LKSLGIHD--LMHFDFLDPPPYETLLLTLEQLYALGAL----------NHLGELTTSGRK 814
Query: 598 LAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKN-FFAMPFRQHLDGYRNKVNFSGS 656
+A+LPV+ L K+I+ + C +E L +AA LS+ N F P + + +VNF
Sbjct: 815 MAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF-L 873
Query: 657 SKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQ 716
D + L+ + W + + W N++Q + +R ++ E+L+ + +
Sbjct: 874 PGGDHLVLLNVYTQWAESGYSSQ---------WCCENFVQFRSMRRARDVREQLEGLLER 924
Query: 717 FNMHVDSRRPVMDQEYIYKQRFILQVVLAGAFY 749
+ + S +YI + + + AG FY
Sbjct: 925 VEVGLSS----CQGDYIR----VRKAITAGYFY 949
>gi|169211440 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box
polypeptide 40 [Homo sapiens]
Length = 452
Score = 228 bits (580), Expect = 4e-59
Identities = 143/424 (33%), Positives = 236/424 (55%), Gaps = 36/424 (8%)
Query: 124 GTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIV 183
GTT P PI + +++++ + NS +I+ G TGSGK+TQLP+Y+ + S + I
Sbjct: 48 GTT---PTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYE--AGFSQHGMIG 102
Query: 184 VTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAK 243
VTQPRK+ A S+A+ +++E TLG VGYQV + ++++T + YMT G LL+ I+
Sbjct: 103 VTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP 162
Query: 244 SLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNS----RFVKVVLMSATISCKEFADYF 299
+L +F+ II+DE HERT D L +++KL + S +KVV+MSAT+ + + +F
Sbjct: 163 NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 222
Query: 300 AVPVQNKMNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVA--V 357
IF++ G+ + V E + N + P E + I +V +
Sbjct: 223 G--------NCPIFDIPGRLYPVREKFCN--------LIGPRDRENTAYIQAIVKVTMDI 266
Query: 358 SLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKRLQVYP 417
L +M D+ + +G QF +E+S L+F ++Y +++ +++ L + P
Sbjct: 267 HLNEMAGDILVFLTG-------QFEIEKSCELLFQMA-ESVDYDYDVQDTILDGLL-ILP 317
Query: 418 LHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNY 477
+ S+ ++Q +FL P PG RK ++STNI+ +S+T+ ++YV+D + L +
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 478 QSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILK 537
L + SK+ QR GRAGR S G C+R+ KDFW+ +PDHV+PE+ R L S +L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 538 VKLL 541
+K L
Sbjct: 438 LKCL 441
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 223 bits (568), Expect = 1e-57
Identities = 169/591 (28%), Positives = 284/591 (48%), Gaps = 85/591 (14%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDH-YVQRSAYCSIVVTQPRKI 190
LPI + KE++V + N ++I+ G TGSGK+TQ+ QY+ + Y R I TQPR++
Sbjct: 565 LPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG---KIGCTQPRRV 621
Query: 191 GASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTH 250
A S+A+ +S+E LG VGY + E + +T + YMT G+LL++ + L ++
Sbjct: 622 AAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 681
Query: 251 IIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPA 310
I++DE HERT D L +++K ++ +K+++ SAT+ +F+ YF A
Sbjct: 682 IMLDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFY--------EA 732
Query: 311 YIFEVEGKPHSVEEYYLNDLE--HIHHSKLSP---HLLEEPVITKDIYEVAVSLIQMFDD 365
IF + G+ + VE Y + E ++ S ++ HL E P
Sbjct: 733 PIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPP------------------- 773
Query: 366 LDMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHK------RLQVYPLH 419
+LVFL G EI+ E+L + L + P++
Sbjct: 774 --------------------GDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 813
Query: 420 SSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQS 479
S++ E Q +F PG RK++++TNIAE+S+T+ + YV+D + V + T
Sbjct: 814 SALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQ 873
Query: 480 LRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVK 539
L ++ S+ QR GRAGR G CYRL + + + + VPE+ R L ST+L +K
Sbjct: 874 LVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLK 933
Query: 540 LLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLA 599
MG L + P + + + L +GAL +DE G LT LGR +A
Sbjct: 934 A--MGINDLLSFDFMDAPPMETLITAMEQLYTLGAL------DDE----GLLTRLGRRMA 981
Query: 600 QLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKS 659
+ P+ L K++++ GC +E L I + LS++N F P + + K F ++
Sbjct: 982 EFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFH-QTEG 1040
Query: 660 DCIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEEL 710
D + L+ + +WK + + W N+IQ + +R ++ +++
Sbjct: 1041 DHLTLLAVYNSWKNNKFSNP---------WCYENFIQARSLRRAQDIRKQM 1082
>gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapiens]
Length = 1227
Score = 221 bits (564), Expect = 3e-57
Identities = 171/598 (28%), Positives = 291/598 (48%), Gaps = 74/598 (12%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
LPI ++E++++I NS+VI+ G TGSGK+TQL QY+ H + Y I TQPR++
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYL--HEDGYTDYGMIGCTQPRRVA 589
Query: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHI 251
A S+A+ +S+E LG VGY + E +E+T + YMT G+LL++ + L ++ I
Sbjct: 590 AMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAI 649
Query: 252 IIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA-VPVQNKMNPA 310
I+DE HER+ D L ++R+++ S +K+++ SAT+ ++FA +F VP
Sbjct: 650 IMDEAHERSLNTDVLFGLLREVVARRSD-LKLIVTSATMDAEKFAAFFGNVP-------- 700
Query: 311 YIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDDLDMKE 370
IF + G+ V+ +L +D E AV K+
Sbjct: 701 -IFHIPGRTFPVD------------------ILFSKTPQEDYVEAAV-----------KQ 730
Query: 371 SGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHK-----RLQVYPLHSSVALE 425
S SGA +L+F+PG +I + + + + L V P++S + +
Sbjct: 731 SLQVHLSGAP-----GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSD 785
Query: 426 EQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWA 485
Q +F G RK I++TNIAE+S+TV + +VID + V + +L++
Sbjct: 786 LQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 845
Query: 486 SKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGE 545
S+ + NQR GRAGR G C+RL + + N + VPE+ R L + +L +K +G
Sbjct: 846 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK--SLGV 903
Query: 546 PRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQ 605
L + PP ++ ++ L +GAL + G LT GR++ + P++
Sbjct: 904 QDLLQFHFMDPPPEDNMLNSMYQLWILGAL----------DNTGGLTSTGRLMVEFPLDP 953
Query: 606 QLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALV 665
L K++++ GC E L+I + LS+ F P + + + + F+ +SD + +
Sbjct: 954 ALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFA-VPESDHLTYL 1012
Query: 666 EAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNMHVDS 723
+ WK + W ++I K +R+V E+ +LK + Q M + S
Sbjct: 1013 NVYLQWKNNNYS---------TIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLAS 1061
>gi|68509926 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Homo
sapiens]
Length = 795
Score = 220 bits (561), Expect = 6e-57
Identities = 167/605 (27%), Positives = 290/605 (47%), Gaps = 85/605 (14%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHY-----VQRSAYCSIVVTQ 186
LP+ YK+ ++ + ++ G TGSGK+TQ+PQ+ +++ +R C TQ
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC----TQ 192
Query: 187 PRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLM 246
PR++ A S+A+ ++ E LG VGY + E ++ T L YMT G+LL++ ++ L
Sbjct: 193 PRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE 252
Query: 247 EFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNK 306
+ II+DE HERT D L+ V+++++R S +KV++MSAT+ +F YF
Sbjct: 253 RYGVIILDEAHERTLATDILMGVLKEVVRQRSD-LKVIVMSATLDAGKFQIYF------- 304
Query: 307 MNPAYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDDL 366
+ + + G+ H VE +Y + E +D E A+ + +
Sbjct: 305 -DNCPLLTIPGRTHPVEIFYTPEPE------------------RDYLEAAIRTVIQ---I 342
Query: 367 DMKESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHELLTSLVHKR------LQVYPLHS 420
M E E +L+FL G EI+ + + V +++ PL+S
Sbjct: 343 HMCEE------------EEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYS 390
Query: 421 SVALEEQNNVFLSPVPGY------RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDED 474
++ ++Q +F P P RK+++STNIAE+S+T+ V +VID + V +
Sbjct: 391 TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR 450
Query: 475 TNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGST 534
+SL ++ SK S QR GRAGR G C+RL + + + D+ PE+LR LGS
Sbjct: 451 IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV 510
Query: 535 ILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFL 594
+L++K L + + + + PP + R + LL + AL DG+LT L
Sbjct: 511 VLQLKKLGIDD--LVHFDFMDPPAPETLMRALELLNYLAAL----------NDDGDLTEL 558
Query: 595 GRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFS 654
G ++A+ P++ QL K+++ + C +E L I A LS+ F P K+ F+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFA 618
Query: 655 GSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRI 714
D + L+ + +K ++ + W N+I + + + ++L +
Sbjct: 619 -HIDGDHLTLLNVYHAFKQNHES---------VQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 715 SQFNM 719
+FN+
Sbjct: 669 DRFNL 673
>gi|20544129 DEAH (Asp-Glu-Ala-His) box polypeptide 35 [Homo
sapiens]
Length = 703
Score = 211 bits (536), Expect = 5e-54
Identities = 182/643 (28%), Positives = 305/643 (47%), Gaps = 90/643 (13%)
Query: 104 TSGPG-----PRPSLAKLSSVTCIPGT------TYKYPDLPISRYKEEVVSLIESNSVVI 152
T GPG R SLA+ S T + + LP+ + + ++ LIE+ V+
Sbjct: 15 TEGPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 153 IHGATGSGKSTQLPQYILDHYVQRSAYCSIV-VTQPRKIGASSIARWISKERAWTLGGVV 211
I G TG GKSTQ+PQY+ + +A +V VTQPR++ A ++A +++ER LG V
Sbjct: 75 IVGETGCGKSTQIPQYLAE--AGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEV 132
Query: 212 GYQVGLEKIATE-DTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVV 270
GY + + + TR+ ++T G+L+++++ L +++ I++DE HERT D + ++
Sbjct: 133 GYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLL 192
Query: 271 RKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMN-PA----YIFEVEGKPHSVEEY 325
+K+ + +++++ SAT+ +F D+F QN+ + PA I VEG+ V+ +
Sbjct: 193 KKIQKKRGD-LRLIVASATLDADKFRDFFN---QNETSDPARDTCVILTVEGRTFPVDIF 248
Query: 326 YLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDDLDMKESGNKAWSGAQFVLER 385
YL SP P K E V + Q D D
Sbjct: 249 YLQ----------SP----VPDYIKSTVETVVKIHQTEGDGD------------------ 276
Query: 386 SSVLVFLPGLGEINYMHELLTSLVH--------KRLQVYPLHSSVALEEQNNVFLSPVPG 437
VL FL G E+ + +L + L+V P+++ + EQ VF
Sbjct: 277 --VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 438 YRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRA 497
RK+I++TN+AE+S+T+ + YVID + + T + L + S+ S NQR GR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 498 GRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPP 557
GR G CYRL ++ +D +P VPEM R L IL++K L G L +SPP
Sbjct: 395 GRSRSGKCYRLYTEEAFD-KLPQSTVPEMQRSNLAPVILQLKAL--GIDNVLRFHFMSPP 451
Query: 558 GLSDIERTILLLKEVGALAVSGQREDENPHDGELTF-LGRVLAQLPVNQQLGKLIVLGHV 616
+ + + LL +G L D LT LG +A+ P+N K+++
Sbjct: 452 PAQSMVQALELLYALGGL----------DKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN 501
Query: 617 FGCLDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQ 676
FGC E L IAA + ++N F +P Q R F+ + D + ++ ++ +
Sbjct: 502 FGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFA-VEEGDHLTMLNIYEAF----- 555
Query: 677 TGELRYPKDELNWGRLNYIQIKRIREVAELYEELKTRISQFNM 719
+++ KD W + +++ K + A + E+LK + +F +
Sbjct: 556 ---IKHNKDS-KWCQEHFLNYKGLVRAATVREQLKKLLVKFQV 594
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 149 bits (377), Expect = 1e-35
Identities = 109/306 (35%), Positives = 154/306 (50%), Gaps = 23/306 (7%)
Query: 384 ERSSVLVFLPGLGEINYMHELL-------TSLVHKRLQVYPLHSSVALEEQNNVFLSPVP 436
+ +VL+FLPG EI + + + H R QV+ LHS++ +Q V +P
Sbjct: 621 DAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTH-RYQVFMLHSNMQTSDQKKVLKNPPA 679
Query: 437 GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGR 496
G RKIILSTNIAE+S+TV DV +VID + D L++ W SK S QRKGR
Sbjct: 680 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Query: 497 AGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLL-DMGEPRA-LLATAL 554
AGR G C+RL + + N + + PE+LR PL L KLL + P A L A
Sbjct: 740 AGRCRPGICFRLFSRLRFQNML-EFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP 798
Query: 555 SPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLG 614
PP + + +LK + A+ +LT LG LA LPV LGK+++
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDTW----------EDLTELGYHLADLPVEPHLGKMVLCA 848
Query: 615 HVFGCLDECLIIAAALSLKNFFAMPFR--QHLDGYRNKVNFSGSSKSDCIALVEAFKTWK 672
V CLD L IA L+ ++ F +P + Q + F+ + SD +AL+ AF+ W+
Sbjct: 849 VVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQ 908
Query: 673 ACRQTG 678
R G
Sbjct: 909 KARSDG 914
Score = 139 bits (351), Expect = 1e-32
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
LP+ +EE+V +I+ N VV+I G TGSGK+TQ+PQ++LD + C I TQPR++
Sbjct: 193 LPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLA 252
Query: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKS-LMEFTH 250
A ++A ++ ER +G +GYQ+ LE + T L + T GVLL+ +++ S L TH
Sbjct: 253 AIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTH 312
Query: 251 IIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPA 310
+I+DEVHER DFLL +R LL+ + +K++L SA + F YF
Sbjct: 313 VIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYF--------GSC 363
Query: 311 YIFEVEGKPHSVEEYYLNDL 330
+ ++G+P V+E +L D+
Sbjct: 364 PVIYIQGRPFEVKEMFLEDI 383
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 123 bits (309), Expect = 1e-27
Identities = 100/356 (28%), Positives = 163/356 (45%), Gaps = 33/356 (9%)
Query: 413 LQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCD 472
L V PL+S +A E+Q VF P G R +++TN+AE+S+T+P +KYV+D + D
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 473 EDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLG 532
T S R++W S+ S +QR GRAGR G+CYRL + PE+ R P+
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPPEITRRPVE 706
Query: 533 STILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQRE-----DENPH 587
IL++K L++ + + +PP + + LL +GAL + E EN
Sbjct: 707 DLILQMKALNV--EKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRL 764
Query: 588 DGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHLDGY 647
+T LGR +A PV + K++ L GCL + I A+++++ F + LD
Sbjct: 765 SCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-----EELDRP 819
Query: 648 RNKVNFSGSSKSDCIALVEAFKTWK---ACRQTGEL----------RYPKDELNWGRLNY 694
KS + + +TW A + G+L Y + N
Sbjct: 820 AASDEELTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANG 879
Query: 695 IQIKRIREVAELYEELKTRIS----QFNMHVDSRRPVMDQEYIYKQRFILQVVLAG 746
++ K + E+ L +L T ++ + + VD P M + ++ Q+V AG
Sbjct: 880 LRYKAMMEIRRLRGQLTTAVNAVCPEAELFVD---PKMQPPTESQVTYLRQIVTAG 932
Score = 97.1 bits (240), Expect = 1e-19
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 36/268 (13%)
Query: 39 EEVQRQDVAPGAGPAAQAPALAQAPARPAAAFERSLSQRSSEVEYINKYRQLEAQELDVC 98
EE D P A PA AP PA A +Q +
Sbjct: 174 EEESELDEDPAAEPAEAGVGTTVAPLPPAPA--------------------PSSQPVPAG 213
Query: 99 RSVQPTSGPGPRPSLAKLSSVTCIPGTTYKYPD-------LPISRYKEEVVSLIESNSVV 151
+V P P A IP + P+ LPI ++ ++ + + +V
Sbjct: 214 MTVPPPPAAAPPLPRALAKPAVFIP--VNRSPEMQEERLKLPILSEEQVIMEAVAEHPIV 271
Query: 152 IIHGATGSGKSTQLPQYILDHYVQRSAYCSIV-VTQPRKIGASSIARWISKERAWTLGGV 210
I+ G TGSGK+TQ+PQ++ + S+ SI+ VT+PR++ A ++++ ++KE + V
Sbjct: 272 IVCGETGSGKTTQVPQFLYE--AGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQR-V 328
Query: 211 VGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVV 270
V YQ+ E TE+TR+ +MT GVLL++I L+ + +IIDE HER+ D L+ ++
Sbjct: 329 VSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLL 388
Query: 271 RKLLRTNSRF---VKVVLMSATISCKEF 295
+++ ++ +K+++MSAT+ ++F
Sbjct: 389 SRIVTLRAKRNLPLKLLIMSATLRVEDF 416
>gi|20336300 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Homo
sapiens]
Length = 743
Score = 114 bits (284), Expect = 8e-25
Identities = 125/518 (24%), Positives = 219/518 (42%), Gaps = 69/518 (13%)
Query: 131 DLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ-RSAYCSIVVTQPRK 189
DLPI + K + + N +VI+ G GKS Q+PQ+ ++ + + ++ TQ K
Sbjct: 61 DLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICTQVHK 120
Query: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
+A ++ E +G VGY + E T +T L Y T +L ++++S L +
Sbjct: 121 QTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSYG 180
Query: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
II+D++HER+ D LL +++ +L ++ S + K + Y VPV
Sbjct: 181 VIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPV------ 234
Query: 310 AYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLIQMFDDLDMK 369
EV+ K H VE YL++ + KD +E + LI ++
Sbjct: 235 ---IEVKNK-HPVEVVYLSEAQ------------------KDSFESILRLI-----FEIH 267
Query: 370 ESGNKAWSGAQFVLERSSVLVFLPGLGEINYMHEL----------LTSLVHKRLQVYPLH 419
SG E+ ++VFL +I + E L LV + +YP
Sbjct: 268 HSG-----------EKGDIVVFLACEQDIEKVCETVYQGSNLNPDLGELV--VVPLYPKE 314
Query: 420 SSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQS 479
+ + R+++L+T+ E + V++VID + R V + S
Sbjct: 315 KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANS 374
Query: 480 LRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVK 539
L + S++ RK G S G + L ++F + EM L S +L +K
Sbjct: 375 LVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMK 434
Query: 540 LLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLA 599
+D+ ++ P + + + L + AL +DG L+ G +++
Sbjct: 435 RIDIAGLGH--CDFMNRPAPESLMQALEDLDYLAAL----------DNDGNLSEFGIIMS 482
Query: 600 QLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFA 637
+ P++ QL K I+ F C+DE L IAA ++ N F+
Sbjct: 483 EFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFS 520
>gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo
sapiens]
Length = 717
Score = 73.2 bits (178), Expect = 2e-12
Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 41/342 (11%)
Query: 388 VLVFLPGLGEINYMHELLTSLVHKRL------QVYPLHSSVALEEQNNVFLSPVPGYRKI 441
VLVFLP EI+ E L+ V L +V PLH Q + RK+
Sbjct: 264 VLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA---VYEDMDARKV 320
Query: 442 ILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVS 501
+++ +A+ S ++P +++VID L V + + L SK R+ RA
Sbjct: 321 VVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFP 380
Query: 502 RGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSD 561
G C L K F + P P + L S +L +K + EP P
Sbjct: 381 PGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAP---- 436
Query: 562 IERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLD 621
E + L+++ LA DG+L+ LG +L++ P+ +L K ++ F C+D
Sbjct: 437 -EALMQALEDLDYLAALDD-------DGDLSDLGVILSEFPLAPELAKALLASCEFDCVD 488
Query: 622 ECLIIAAAL-SLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAF------KTWKAC 674
E L +AA L + F P R + + S I + EAF + W C
Sbjct: 489 EMLTLAAMLTAAPGFTRPPLSAEEAALRRALEHTDGDHSSLIQVYEAFIQSGADEAW--C 546
Query: 675 RQTGELRYPKDELNWGRLNYIQIKRIR-EVAELYEELKTRIS 715
+ G LNW L Q ++R E+ EL + ++ +S
Sbjct: 547 QARG--------LNWAAL--CQAHKLRGELLELMQRIELPLS 578
Score = 71.6 bits (174), Expect = 5e-12
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 106 GPGPRPSLAKLSSVTCIPGTTYKYP------DLPISRYKEEVVSLIESN--SVVIIHGAT 157
GP P S ++ +P ++ Y LPI + + +ESN VV++ G
Sbjct: 13 GPSPGESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEP 72
Query: 158 GSGKSTQLPQYILDHYVQRSAYCS-IVVTQPRKIGASSIARWISKERAWTLGGVVGYQVG 216
GSGKSTQ+PQ+ + + R + VTQP + A S+A ++ E TLG VGY +
Sbjct: 73 GSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIP 132
Query: 217 LEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFL 266
E +T L + +LLQ++ S + + +++DE ER+ D L
Sbjct: 133 QEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSL 182
>gi|169163653 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 58.5 bits (140), Expect = 4e-08
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 30/248 (12%)
Query: 904 VTEVVEVGHFWGYRIDENNS--EILKKLT-----AEINQLTLVPLPTHPHPDLVCLAPFA 956
+ V+ +FW D N EI+K + E +++ L P P L C A ++
Sbjct: 634 IAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMIL----RKPEPGLFCCARYS 689
Query: 957 DFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKM 1016
+R++RA + ++G V+F+DYGN + + + +F ELP A+ + +
Sbjct: 690 K--DRRFYRAVITEINGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747
Query: 1017 RPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRD 1076
P W+ A +F LV +L++V + V++ Q + I++
Sbjct: 748 FPVEDL------WTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNI-QSVEASENIDVIS 800
Query: 1077 VLIQQGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFS 1136
+++Q GYAE + E F KSV + + K + K +I LLE
Sbjct: 801 LMLQAGYAEYFQVELE----------YFPKSVSEYSMLNSESKNKVNIKKVISALLEGPK 850
Query: 1137 TNKLGTPN 1144
+ K + N
Sbjct: 851 SKKYHSNN 858
Score = 41.6 bits (96), Expect = 0.005
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 920 ENNSEILKKLTAEINQL--TLVPLPTH-PHPDLVCLAPFADFDKQRYFRAQVLYVSGNSA 976
E+ +I+K L ++ L TL LP P CL + D+ + R ++ VS S
Sbjct: 1899 EDFFDIMKYLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQ--WNRVEISEVSPQSL 1956
Query: 977 EVFFVDYGNKSHV---DLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDGA 1033
+ VDYG ++ ++ L +P + L LP + + + P+ GKHWS+ A
Sbjct: 1957 CLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAK-----GKHWSEEA 2011
Query: 1034 SQWFASLVSGCTLLVKVFSVVHS--VLHVDVYQYSGVQDAINIRDVLIQQGYAELTEES 1090
+F +S L+ + F HS L VDV + + N+ D+L+ G A +++S
Sbjct: 2012 KIFFRDFLSKPDLVFQ-FREYHSETKLKVDV-----IHEKNNLADILVASGLATYSKDS 2064
Score = 37.4 bits (85), Expect = 0.10
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 900 LTIDVTEVVEVGHFWG-----YRIDENNSEILKKLTAEINQLTLVPLPTHPHPDL-VCLA 953
+ I E V + H + ++ NN ++ T + L P + + VC++
Sbjct: 1107 IQIGSEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFPKYDSNKMRVCIS 1166
Query: 954 PFADFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLEL---PFQALE 1010
+ + D Y + S + +V+FVD+GNK V ++L I QF EL P QA++
Sbjct: 1167 KYVE-DGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIK 1225
Query: 1011 FKICKMR 1017
+ +R
Sbjct: 1226 CFLSDLR 1232
Score = 37.0 bits (84), Expect = 0.13
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 973 GNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDG 1032
GNS EV F+DYGN + V+ + E+ +FL +P + + ++ + + W D
Sbjct: 1516 GNSFEVEFIDYGNSAIVNTSKIYELQREFLTVPQLGIHAFLSGVKWNEPDEI----WDDK 1571
Query: 1033 ASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQQGYAELTEESYE 1092
+F S V T+ + V++ + I ++L + ++L + + +
Sbjct: 1572 TVDYFTSKVHNKTVYCEFLKKHDQKWEVNMI----CDEKCVINELLKWKACSKLQKSALQ 1627
Query: 1093 SKQ--SHEVLKG--LFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL 1140
Q S +V G K N ++GS+ + + L +I LE F +L
Sbjct: 1628 MPQVLSQKVRPGDNEMKKGKSNESEGSM-----NSNQQLFKIPLEEFKLGQL 1674
Score = 32.7 bits (73), Expect = 2.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 923 SEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDKQRYFRAQVLYVSGNSAEVFFVD 982
SE LK L +I + + C+A ++ ++ RA VL ++ FVD
Sbjct: 925 SEDLKLLMEQIQNYYSIHSDPYEIGQTACVAKYSG----KWCRAAVLTQVSKEVDIVFVD 980
Query: 983 YGNKSHVDLHLLMEIPCQFLELPFQALEFKIC 1014
YG + V + L I +FL L QA F+ C
Sbjct: 981 YGYQKRVLIEDLCAINPRFLLLESQA--FRCC 1010
>gi|169164192 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 58.5 bits (140), Expect = 4e-08
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 30/248 (12%)
Query: 904 VTEVVEVGHFWGYRIDENNS--EILKKLT-----AEINQLTLVPLPTHPHPDLVCLAPFA 956
+ V+ +FW D N EI+K + E +++ L P P L C A ++
Sbjct: 634 IAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMIL----RKPEPGLFCCARYS 689
Query: 957 DFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKM 1016
+R++RA + ++G V+F+DYGN + + + +F ELP A+ + +
Sbjct: 690 K--DRRFYRAVITEINGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747
Query: 1017 RPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRD 1076
P W+ A +F LV +L++V + V++ Q + I++
Sbjct: 748 FPVEDL------WTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNI-QSVEASENIDVIS 800
Query: 1077 VLIQQGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFS 1136
+++Q GYAE + E F KSV + + K + K +I LLE
Sbjct: 801 LMLQAGYAEYFQVELE----------YFPKSVSEYSMLNSESKNKVNIKKVISALLEGPK 850
Query: 1137 TNKLGTPN 1144
+ K + N
Sbjct: 851 SKKYHSNN 858
Score = 41.6 bits (96), Expect = 0.005
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 920 ENNSEILKKLTAEINQL--TLVPLPTH-PHPDLVCLAPFADFDKQRYFRAQVLYVSGNSA 976
E+ +I+K L ++ L TL LP P CL + D+ + R ++ VS S
Sbjct: 1899 EDFFDIMKYLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQ--WNRVEISEVSPQSL 1956
Query: 977 EVFFVDYGNKSHV---DLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDGA 1033
+ VDYG ++ ++ L +P + L LP + + + P+ GKHWS+ A
Sbjct: 1957 CLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAK-----GKHWSEEA 2011
Query: 1034 SQWFASLVSGCTLLVKVFSVVHS--VLHVDVYQYSGVQDAINIRDVLIQQGYAELTEES 1090
+F +S L+ + F HS L VDV + + N+ D+L+ G A +++S
Sbjct: 2012 KIFFRDFLSKPDLVFQ-FREYHSETKLKVDV-----IHEKNNLADILVASGLATYSKDS 2064
Score = 37.4 bits (85), Expect = 0.10
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 900 LTIDVTEVVEVGHFWG-----YRIDENNSEILKKLTAEINQLTLVPLPTHPHPDL-VCLA 953
+ I E V + H + ++ NN ++ T + L P + + VC++
Sbjct: 1107 IQIGSEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFPKYDSNKMRVCIS 1166
Query: 954 PFADFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLEL---PFQALE 1010
+ + D Y + S + +V+FVD+GNK V ++L I QF EL P QA++
Sbjct: 1167 KYVE-DGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIK 1225
Query: 1011 FKICKMR 1017
+ +R
Sbjct: 1226 CFLSDLR 1232
Score = 37.0 bits (84), Expect = 0.13
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 973 GNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDG 1032
GNS EV F+DYGN + V+ + E+ +FL +P + + ++ + + W D
Sbjct: 1516 GNSFEVEFIDYGNSAIVNTSKIYELQREFLTVPQLGIHAFLSGVKWNEPDEI----WDDK 1571
Query: 1033 ASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQQGYAELTEESYE 1092
+F S V T+ + V++ + I ++L + ++L + + +
Sbjct: 1572 TVDYFTSKVHNKTVYCEFLKKHDQKWEVNMI----CDEKCVINELLKWKACSKLQKSALQ 1627
Query: 1093 SKQ--SHEVLKG--LFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL 1140
Q S +V G K N ++GS+ + + L +I LE F +L
Sbjct: 1628 MPQVLSQKVRPGDNEMKKGKSNESEGSM-----NSNQQLFKIPLEEFKLGQL 1674
Score = 32.7 bits (73), Expect = 2.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 923 SEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDKQRYFRAQVLYVSGNSAEVFFVD 982
SE LK L +I + + C+A ++ ++ RA VL ++ FVD
Sbjct: 925 SEDLKLLMEQIQNYYSIHSDPYEIGQTACVAKYSG----KWCRAAVLTQVSKEVDIVFVD 980
Query: 983 YGNKSHVDLHLLMEIPCQFLELPFQALEFKIC 1014
YG + V + L I +FL L QA F+ C
Sbjct: 981 YGYQKRVLIEDLCAINPRFLLLESQA--FRCC 1010
>gi|169163210 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 58.5 bits (140), Expect = 4e-08
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 30/248 (12%)
Query: 904 VTEVVEVGHFWGYRIDENNS--EILKKLT-----AEINQLTLVPLPTHPHPDLVCLAPFA 956
+ V+ +FW D N EI+K + E +++ L P P L C A ++
Sbjct: 634 IAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMIL----RKPEPGLFCCARYS 689
Query: 957 DFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKM 1016
+R++RA + ++G V+F+DYGN + + + +F ELP A+ + +
Sbjct: 690 K--DRRFYRAVITEINGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLAHI 747
Query: 1017 RPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRD 1076
P W+ A +F LV +L++V + V++ Q + I++
Sbjct: 748 FPVEDL------WTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNI-QSVEASENIDVIS 800
Query: 1077 VLIQQGYAELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEKYLIRILLESFS 1136
+++Q GYAE + E F KSV + + K + K +I LLE
Sbjct: 801 LMLQAGYAEYFQVELE----------YFPKSVSEYSMLNSESKNKVNIKKVISALLEGPK 850
Query: 1137 TNKLGTPN 1144
+ K + N
Sbjct: 851 SKKYHSNN 858
Score = 41.6 bits (96), Expect = 0.005
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 920 ENNSEILKKLTAEINQL--TLVPLPTH-PHPDLVCLAPFADFDKQRYFRAQVLYVSGNSA 976
E+ +I+K L ++ L TL LP P CL + D+ + R ++ VS S
Sbjct: 1899 EDFFDIMKYLFMLLSDLPETLQTLPQEFIIPGSSCLFKYKSEDQ--WNRVEISEVSPQSL 1956
Query: 977 EVFFVDYGNKSHV---DLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDGA 1033
+ VDYG ++ ++ L +P + L LP + + + P+ GKHWS+ A
Sbjct: 1957 CLVLVDYGFSFYIRYSEIINLKVVPEELLNLPRLSYPCILYGILPAK-----GKHWSEEA 2011
Query: 1034 SQWFASLVSGCTLLVKVFSVVHS--VLHVDVYQYSGVQDAINIRDVLIQQGYAELTEES 1090
+F +S L+ + F HS L VDV + + N+ D+L+ G A +++S
Sbjct: 2012 KIFFRDFLSKPDLVFQ-FREYHSETKLKVDV-----IHEKNNLADILVASGLATYSKDS 2064
Score = 37.4 bits (85), Expect = 0.10
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 900 LTIDVTEVVEVGHFWG-----YRIDENNSEILKKLTAEINQLTLVPLPTHPHPDL-VCLA 953
+ I E V + H + ++ NN ++ T + L P + + VC++
Sbjct: 1107 IQIGSEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFPKYDSNKMRVCIS 1166
Query: 954 PFADFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLEL---PFQALE 1010
+ + D Y + S + +V+FVD+GNK V ++L I QF EL P QA++
Sbjct: 1167 KYVE-DGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQFPELLFTPMQAIK 1225
Query: 1011 FKICKMR 1017
+ +R
Sbjct: 1226 CFLSDLR 1232
Score = 37.0 bits (84), Expect = 0.13
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 973 GNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRPSAKSLVCGKHWSDG 1032
GNS EV F+DYGN + V+ + E+ +FL +P + + ++ + + W D
Sbjct: 1516 GNSFEVEFIDYGNSAIVNTSKIYELQREFLTVPQLGIHAFLSGVKWNEPDEI----WDDK 1571
Query: 1033 ASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQDAINIRDVLIQQGYAELTEESYE 1092
+F S V T+ + V++ + I ++L + ++L + + +
Sbjct: 1572 TVDYFTSKVHNKTVYCEFLKKHDQKWEVNMI----CDEKCVINELLKWKACSKLQKSALQ 1627
Query: 1093 SKQ--SHEVLKG--LFSKSVENMTDGSVPFPMKDDEKYLIRILLESFSTNKL 1140
Q S +V G K N ++GS+ + + L +I LE F +L
Sbjct: 1628 MPQVLSQKVRPGDNEMKKGKSNESEGSM-----NSNQQLFKIPLEEFKLGQL 1674
Score = 32.7 bits (73), Expect = 2.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 923 SEILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDKQRYFRAQVLYVSGNSAEVFFVD 982
SE LK L +I + + C+A ++ ++ RA VL ++ FVD
Sbjct: 925 SEDLKLLMEQIQNYYSIHSDPYEIGQTACVAKYSG----KWCRAAVLTQVSKEVDIVFVD 980
Query: 983 YGNKSHVDLHLLMEIPCQFLELPFQALEFKIC 1014
YG + V + L I +FL L QA F+ C
Sbjct: 981 YGYQKRVLIEDLCAINPRFLLLESQA--FRCC 1010
>gi|145312259 tudor and KH domain containing isoform a [Homo sapiens]
Length = 561
Score = 57.0 bits (136), Expect = 1e-07
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 24/239 (10%)
Query: 897 DLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQL--TLVPLPTHPHPDLVCLAP 954
D L + V+ HFW +I + S L KL E+ Q VP H + AP
Sbjct: 305 DEYLEVYVSASEHPNHFW-IQIVGSRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAP 363
Query: 955 FADFDKQRYFRAQVLYVSGN-SAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKI 1013
++RA+VL N + +++FVD+G+ L L + FL LPFQA+E +
Sbjct: 364 LPT--NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSL 421
Query: 1014 CKMRPSAKSLVCGKHWSDGASQWFASLVSGC---TLLVKVFSVVHSVLHV--DVYQY-SG 1067
++ PS G W + A F L L+ K+ S V + + +Y Y +
Sbjct: 422 ARIAPS------GDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTS 475
Query: 1068 VQDAINIRDVLIQQGYA-ELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEK 1125
++I L+ +GYA EL E+ E++ ++LK + ++ TD S+ + + +K
Sbjct: 476 NGKKLDIGLELVHKGYAIELPEDIEENRAVPDMLKDMATE-----TDASLSTLLTETKK 529
>gi|145312246 tudor and KH domain containing isoform b [Homo sapiens]
Length = 516
Score = 57.0 bits (136), Expect = 1e-07
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 24/239 (10%)
Query: 897 DLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQL--TLVPLPTHPHPDLVCLAP 954
D L + V+ HFW +I + S L KL E+ Q VP H + AP
Sbjct: 260 DEYLEVYVSASEHPNHFW-IQIVGSRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAP 318
Query: 955 FADFDKQRYFRAQVLYVSGN-SAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKI 1013
++RA+VL N + +++FVD+G+ L L + FL LPFQA+E +
Sbjct: 319 LPT--NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSL 376
Query: 1014 CKMRPSAKSLVCGKHWSDGASQWFASLVSGC---TLLVKVFSVVHSVLHV--DVYQY-SG 1067
++ PS G W + A F L L+ K+ S V + + +Y Y +
Sbjct: 377 ARIAPS------GDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTS 430
Query: 1068 VQDAINIRDVLIQQGYA-ELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEK 1125
++I L+ +GYA EL E+ E++ ++LK + ++ TD S+ + + +K
Sbjct: 431 NGKKLDIGLELVHKGYAIELPEDIEENRAVPDMLKDMATE-----TDASLSTLLTETKK 484
>gi|145312270 tudor and KH domain containing isoform a [Homo sapiens]
Length = 561
Score = 57.0 bits (136), Expect = 1e-07
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 24/239 (10%)
Query: 897 DLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQL--TLVPLPTHPHPDLVCLAP 954
D L + V+ HFW +I + S L KL E+ Q VP H + AP
Sbjct: 305 DEYLEVYVSASEHPNHFW-IQIVGSRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAP 363
Query: 955 FADFDKQRYFRAQVLYVSGN-SAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKI 1013
++RA+VL N + +++FVD+G+ L L + FL LPFQA+E +
Sbjct: 364 LPT--NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSL 421
Query: 1014 CKMRPSAKSLVCGKHWSDGASQWFASLVSGC---TLLVKVFSVVHSVLHV--DVYQY-SG 1067
++ PS G W + A F L L+ K+ S V + + +Y Y +
Sbjct: 422 ARIAPS------GDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTS 475
Query: 1068 VQDAINIRDVLIQQGYA-ELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEK 1125
++I L+ +GYA EL E+ E++ ++LK + ++ TD S+ + + +K
Sbjct: 476 NGKKLDIGLELVHKGYAIELPEDIEENRAVPDMLKDMATE-----TDASLSTLLTETKK 529
>gi|145312256 tudor and KH domain containing isoform a [Homo sapiens]
Length = 561
Score = 57.0 bits (136), Expect = 1e-07
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 24/239 (10%)
Query: 897 DLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQL--TLVPLPTHPHPDLVCLAP 954
D L + V+ HFW +I + S L KL E+ Q VP H + AP
Sbjct: 305 DEYLEVYVSASEHPNHFW-IQIVGSRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAP 363
Query: 955 FADFDKQRYFRAQVLYVSGN-SAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKI 1013
++RA+VL N + +++FVD+G+ L L + FL LPFQA+E +
Sbjct: 364 LPT--NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSL 421
Query: 1014 CKMRPSAKSLVCGKHWSDGASQWFASLVSGC---TLLVKVFSVVHSVLHV--DVYQY-SG 1067
++ PS G W + A F L L+ K+ S V + + +Y Y +
Sbjct: 422 ARIAPS------GDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTS 475
Query: 1068 VQDAINIRDVLIQQGYA-ELTEESYESKQSHEVLKGLFSKSVENMTDGSVPFPMKDDEK 1125
++I L+ +GYA EL E+ E++ ++LK + ++ TD S+ + + +K
Sbjct: 476 NGKKLDIGLELVHKGYAIELPEDIEENRAVPDMLKDMATE-----TDASLSTLLTETKK 529
>gi|58197558 tudor domain containing 6 [Homo sapiens]
Length = 2096
Score = 56.2 bits (134), Expect = 2e-07
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 945 PHPDLVCLAPFADFDKQRYFRAQVLYVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLEL 1004
P PD +C + + Y+RA V + S +VF VD GN +VD + + + QF +L
Sbjct: 537 PEPDDLCCVKWKE---NGYYRAIVTKLDDKSVDVFLVDRGNSENVDWYDVRMLLPQFRQL 593
Query: 1005 PFQALEFKICKMRPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQ 1064
P A++ + + P GK WS A +F V L++ + +++
Sbjct: 594 PILAVKCTLADIWP------LGKTWSQEAVSFFKKTVLHKELVIHILDKQDHQYVIEILD 647
Query: 1065 YSGVQDAINIRDVLIQQGYAELTEESYESKQS 1096
S + NI V+ Q GYA+ E +E+K++
Sbjct: 648 ESRTGEE-NISKVIAQAGYAKYQE--FETKEN 676
Score = 40.4 bits (93), Expect = 0.012
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 922 NSEILKKLTAEINQLT--LVPLPTHP-HPDLVCLAPFADFDKQRYFRAQVLYVSGNSAEV 978
N+ IL++L+ I QL+ L+ L T P +P +CLA + D + ++R V + +V
Sbjct: 1008 NANILEQLSCSITQLSKVLLNLKTSPLNPGTLCLAKYTDGN---WYRGIV--IEKEPKKV 1062
Query: 979 FFVDYGNKSHVDLHLLMEIPC---QFLELPFQAL 1009
FFVD+GN V L+ IP L LP QA+
Sbjct: 1063 FFVDFGNIYVVTSDDLLPIPSDAYDVLLLPMQAV 1096
Score = 34.7 bits (78), Expect = 0.65
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 882 MQVSFNTSDRSQTVTDLLLTIDVTEVVEVGHFWGYRIDENNSEILKKLTAEINQLTLVPL 941
+++ +S + + + + V+ V G+FW N + LK L ++I
Sbjct: 756 LEIKPGSSSKGELEVGSTVEVRVSYVENPGYFWCQLT--RNIQGLKTLMSDIQYYCKNTA 813
Query: 942 PTHPHPDLVCLAPFADFDKQRYFRAQVLYV-SGNSAEVFFVDYGNKSHVDLHLLMEIPCQ 1000
H L CLA +++ RA + + S V FVDYG++ V + + I +
Sbjct: 814 APHQRNTLACLAKRTV--NRQWSRALISGIQSVEHVNVTFVDYGDREMVSVKNIYSISEE 871
Query: 1001 FLELPFQA 1008
FL++ QA
Sbjct: 872 FLKVKAQA 879
>gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens]
Length = 903
Score = 55.8 bits (133), Expect = 3e-07
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 900 LTIDVTEV--VEVGHFWGYRIDENNSEILKKLTAEI----NQLTLVPLPTHPHPDLVCLA 953
+T++V V V GH + + L+ L ++ +Q + LPT ++C A
Sbjct: 708 ITVEVIVVNQVNAGHLFVQQHTHPTFHALRSLDQQMYLCYSQPGIPTLPTPVEITVICAA 767
Query: 954 PFADFDKQRYFRAQVL--YVSGNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEF 1011
P AD ++RAQV+ Y N E+ +VDYG V + +L +I F+ LPFQ E
Sbjct: 768 PGAD---GAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEV 824
Query: 1012 KICKMRPSAKSLVCGKHWSDGASQWFASLVSGCTLLVKVFSVVHSVLHVDVYQYSGVQD- 1070
+ + P L +S A + + LL +V S + L + + +S V D
Sbjct: 825 LLDSVMP----LSDDDQFSPEADAAMSEMTGNTALLAQVTSYSPTGLPL-IQLWSVVGDE 879
Query: 1071 AINIRDVLIQQGYAELTEESYES 1093
+ I L+++G A+ + Y S
Sbjct: 880 VVLINRSLVERGLAQWVDSYYTS 902
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,307,893
Number of Sequences: 37866
Number of extensions: 2295915
Number of successful extensions: 7210
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 7006
Number of HSP's gapped (non-prelim): 143
length of query: 1382
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1267
effective length of database: 13,892,928
effective search space: 17602339776
effective search space used: 17602339776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.