Guide to the Human Genome
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Name: KIAA0753 Sequence: fasta or formatted (967aa) NCBI GI: 154689847
Description:

hypothetical protein LOC9851

Referenced in:

Centromere Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         79           3
 C cysteine            1.7         16           1
 D aspartate           5.7         55           2
 E glutamate           9.3         90           2
 F phenylalanine       2.0         19           1
 G glycine             3.1         30           1
 H histidine           3.1         30           2
 I isoleucine          4.1         40           2
 K lysine              8.2         79           3
 L leucine             9.3         90           2
 M methionine          1.6         15           2
 N asparagine          2.4         23           2
 P proline             6.4         62           2
 Q glutamine           6.6         64           3
 R arginine            6.9         67           2
 S serine              9.2         89           3
 T threonine           4.2         41           2
 V valine              5.5         53           2
 W tryptophan          0.9          9           1
 Y tyrosine            1.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9851 
CENPE                 0.018   centromere protein E 
PLEC1                 0.015   plectin 1 isoform 11 
PLEC1                 0.015   plectin 1 isoform 10 
PLEC1                 0.015   plectin 1 isoform 8 
PLEC1                 0.015   plectin 1 isoform 7 
PLEC1                 0.015   plectin 1 isoform 6 
PLEC1                 0.015   plectin 1 isoform 3 
PLEC1                 0.015   plectin 1 isoform 2 
PLEC1                 0.015   plectin 1 isoform 1 
LOC440243             0.014   PREDICTED: Putative golgin subfamily A member 6-lik...
CEP250                0.014   centrosomal protein 2 
FYCO1                 0.013   FYVE and coiled-coil domain containing 1 
LOC283767             0.013   golgi autoantigen, golgin subfamily a-like 
GOLGA4                0.012   golgi autoantigen, golgin subfamily a, 4 
LOC727832             0.012   golgi autoantigen, golgin subfamily a-like 
BRD3                  0.011   bromodomain containing protein 3 
GOLGA1                0.010   golgin 97 
PPL                   0.010   periplakin 
MYH1                  0.009   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC88A               0.009   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.009   coiled-coil domain containing 88A isoform 1 
EVPL                  0.009   envoplakin 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
KTN1                  0.008   kinectin 1 isoform b 
CENPF                 0.008   centromere protein F 
CCDC49                0.008   coiled-coil domain containing 49 
MYH7                  0.008   myosin, heavy chain 7, cardiac muscle, beta 
LOC100132816          0.008   PREDICTED: similar to Putative golgin subfamily A m...
SKI                   0.008   v-ski sarcoma viral oncogene homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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