Guide to the Human Genome
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Name: DMRT2 Sequence: fasta or formatted (561aa) NCBI GI: 153945850
Description:

doublesex and mab-3 related transcription factor 2 isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [226aa] doublesex and mab-3 related transcription factor 2 isoform 1
alt prot [226aa] doublesex and mab-3 related transcription factor 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         44           3
 C cysteine            2.9         16           1
 D aspartate           5.7         32           3
 E glutamate           7.5         42           3
 F phenylalanine       3.0         17           1
 G glycine             6.6         37           3
 H histidine           1.6          9           1
 I isoleucine          2.1         12           1
 K lysine              5.5         31           2
 L leucine             8.4         47           2
 M methionine          2.0         11           2
 N asparagine          2.9         16           2
 P proline             9.8         55           3
 Q glutamine           5.3         30           2
 R arginine            7.1         40           2
 S serine              8.2         46           2
 T threonine           5.2         29           2
 V valine              5.5         31           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   doublesex and mab-3 related transcription factor 2 ... 
DMRT2                 0.370   doublesex and mab-3 related transcription factor 2 ...
DMRT2                 0.370   doublesex and mab-3 related transcription factor 2 is...
DMRT1                 0.086   doublesex and mab-3 related transcription factor 1 [...
DMRTA1                0.084   DMRT-like family A1 
DMRTA2                0.082   DMRT-like family A2 
DMRT3                 0.075   doublesex and mab-3 related transcription factor 3 [...
DMRTC2                0.064   DMRT-like family C2 
DMRTB1                0.049   DMRT-like family B with proline-rich C-terminal, 1 [...
PRB2                  0.018   proline-rich protein BstNI subfamily 2 
PRG2                  0.018   plasticity-related protein 2 
KCTD1                 0.018   potassium channel tetramerisation domain containing...
PRB1                  0.017   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SFPQ                  0.017   splicing factor proline/glutamine rich (polypyrimidin...
PSD                   0.016   pleckstrin and Sec7 domain containing 
PHLDB3                0.015   pleckstrin homology-like domain, family B, member 3...
ATAD2                 0.015   ATPase family, AAA domain containing 2 
LOC100287390          0.015   PREDICTED: hypothetical protein XP_002342820 
LOC100287390          0.015   PREDICTED: hypothetical protein 
KNDC1                 0.014   kinase non-catalytic C-lobe domain (KIND) containin...
OGFR                  0.014   opioid growth factor receptor 
LOC729196             0.013   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
CIC                   0.013   capicua homolog 
BCL9L                 0.013   B-cell CLL/lymphoma 9-like 
C19orf57              0.013   hypothetical protein LOC79173 
ADAMTS19              0.013   ADAM metallopeptidase with thrombospondin type 1 mo...
MBD1                  0.013   methyl-CpG binding domain protein 1 isoform 2 
CCDC96                0.013   coiled-coil domain containing 96 
MARCKS                0.013   myristoylated alanine-rich protein kinase C substra...
PRB1                  0.013   proline-rich protein BstNI subfamily 1 isoform 2 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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