TRIM21 5200

Name: TRIM21	Sequence: fasta or formatted (475aa)		NCBI GI: 15208660
Description: tripartite motif protein 21		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 28 2 C cysteine 3.8 18 1 D aspartate 4.2 20 1 E glutamate 9.7 46 3 F phenylalanine 3.6 17 2 G glycine 6.3 30 3 H histidine 3.2 15 1 I isoleucine 4.2 20 2 K lysine 5.7 27 2 L leucine 10.7 51 2 M methionine 1.7 8 2 N asparagine 2.9 14 2 P proline 4.4 21 2 Q glutamine 6.7 32 2 R arginine 6.3 30 2 S serine 6.5 31 2 T threonine 4.0 19 1 V valine 6.1 29 1 W tryptophan 2.1 10 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein 21 TRIM6 0.393 tripartite motif-containing 6 isoform 2 TRIM6 0.393 tripartite motif-containing 6 isoform 1 TRIM58 0.376 tripartite motif-containing 58 TRIM68 0.369 ring finger protein 137 TRIM34 0.362 tripartite motif protein 34 isoform 1 TRIM34 0.362 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.362 tripartite motif-containing 6 and tripartite motif-c... TRIM22 0.348 tripartite motif-containing 22 TRIM39 0.348 tripartite motif-containing 39 isoform 2 TRIM11 0.342 tripartite motif-containing 11 TRIM38 0.340 tripartite motif-containing 38 TRIM5 0.338 tripartite motif protein TRIM5 isoform alpha TRIM39 0.334 tripartite motif-containing 39 isoform 1 TRIM27 0.321 ret finger protein TRIM17 0.284 tripartite motif-containing 17 isoform 1 TRIM17 0.284 tripartite motif-containing 17 isoform 1 TRIML1 0.283 tripartite motif family-like 1 TRIM17 0.260 tripartite motif-containing 17 isoform 2 TRIM60 0.257 ring finger protein 129 TRIM75 0.255 tripartite motif-containing 75 TRIM4 0.247 tripartite motif protein TRIM4 isoform beta TRIM7 0.243 tripartite motif-containing 7 isoform 1 MEFV 0.239 Mediterranean fever protein TRIM64 0.234 tripartite motif-containing 64 TRIM4 0.234 tripartite motif protein TRIM4 isoform alpha LOC642446 0.232 PREDICTED: tripartite motif-containing protein 64B-... TRIM5 0.230 tripartite motif protein TRIM5 isoform delta TRIM5 0.230 tripartite motif protein TRIM5 isoform gamma LOC646754 0.217 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.