Search of human proteins with 15042969

Search of human proteins with 15042969

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15042969 transmembrane protein 27 [Homo sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15042969 transmembrane protein 27 [Homo sapiens]                   450   e-127
gi|11225609 angiotensin I converting enzyme 2 precursor [Homo sa...   147   7e-36
gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]                 33   0.19 
gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens]                 33   0.19 
gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens]                 33   0.19 
gi|148728162 protein tyrosine phosphatase, receptor type, J isof...    33   0.25 
gi|157384977 glutamate receptor, ionotropic, delta 2 [Homo sapiens]    32   0.43 
gi|118130809 endothelial cell-specific chemotaxis regulator [Hom...    32   0.56 
gi|89063265 PREDICTED: similar to MHC class I antigen [Homo sapi...    32   0.56 
gi|16306532 cadherin 11, type 2 preproprotein [Homo sapiens]           31   0.74 
gi|49170034 integrin, alpha 8 [Homo sapiens]                           31   0.96 
gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens]                30   1.3  
gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens]       30   1.6  
gi|223468595 integrin alpha-V isoform 2 [Homo sapiens]                 30   1.6  
gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens]         30   1.6  
gi|16306537 cadherin 20, type 2 preproprotein [Homo sapiens]           30   1.6  
gi|88758615 integrin alpha 2b preproprotein [Homo sapiens]             30   2.1  
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ...    29   2.8  
gi|52485853 integrin, alpha 11 precursor [Homo sapiens]                29   2.8  
gi|27477105 lipidosin [Homo sapiens]                                   29   2.8  
gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo sa...    29   2.8  
gi|46488946 killer cell immunoglobulin-like receptor, three doma...    29   3.7  
gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]         29   3.7  
gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]         29   3.7  
gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]         29   3.7  
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    28   4.8  
gi|104487611 protein tyrosine phosphatase, receptor type, sigma ...    28   4.8  
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ...    28   4.8  
gi|104487295 protein tyrosine phosphatase, receptor type, sigma ...    28   4.8  
gi|94721259 solute carrier family 26, member 6 isoform 4 [Homo s...    28   4.8  

>gi|15042969 transmembrane protein 27 [Homo sapiens]
          Length = 222

 Score =  450 bits (1158), Expect = e-127
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MLWLLFFLVTAIHAELCQPGAENAFKVRLSIRTALGDKAYAWDTNEEYLFKAMVAFSMRK 60
           MLWLLFFLVTAIHAELCQPGAENAFKVRLSIRTALGDKAYAWDTNEEYLFKAMVAFSMRK
Sbjct: 1   MLWLLFFLVTAIHAELCQPGAENAFKVRLSIRTALGDKAYAWDTNEEYLFKAMVAFSMRK 60

Query: 61  VPNREATEISHVLLCNVTQRVSFWFVVTDPSKNHTLPAVEVQSAIRMNKNRINNAFFLND 120
           VPNREATEISHVLLCNVTQRVSFWFVVTDPSKNHTLPAVEVQSAIRMNKNRINNAFFLND
Sbjct: 61  VPNREATEISHVLLCNVTQRVSFWFVVTDPSKNHTLPAVEVQSAIRMNKNRINNAFFLND 120

Query: 121 QTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVD 180
           QTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVD
Sbjct: 121 QTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVD 180

Query: 181 DAEDKCENMITIENGIPSDPLDMKGGHINDAFMTEDERLTPL 222
           DAEDKCENMITIENGIPSDPLDMKGGHINDAFMTEDERLTPL
Sbjct: 181 DAEDKCENMITIENGIPSDPLDMKGGHINDAFMTEDERLTPL 222


>gi|11225609 angiotensin I converting enzyme 2 precursor [Homo
           sapiens]
          Length = 805

 Score =  147 bits (371), Expect = 7e-36
 Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 22/205 (10%)

Query: 19  PGAENAFKVRLSIRTALGDKAYAWDTNEEYLFKAMVAFSMRKVPNREATEI-----SHVL 73
           P A+ + KVR+S+++ALGDKAY W+ NE YLF++ VA++MR+   +   ++       V 
Sbjct: 612 PYADQSIKVRISLKSALGDKAYEWNDNEMYLFRSSVAYAMRQYFLKVKNQMILFGEEDVR 671

Query: 74  LCNVTQRVSFWFVVTDPSK-NHTLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTL 132
           + N+  R+SF F VT P   +  +P  EV+ AIRM+++RIN+AF LND +LEFL I  TL
Sbjct: 672 VANLKPRISFNFFVTAPKNVSDIIPRTEVEKAIRMSRSRINDAFRLNDNSLEFLGIQPTL 731

Query: 133 APPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKCENMITI 192
            PP  P V IW+I+FGV+  +I+V I +LI +GI  R++KNK  S         EN    
Sbjct: 732 GPPNQPPVSIWLIVFGVVMGVIVVGIVILIFTGIRDRKKKNKARSG--------EN---- 779

Query: 193 ENGIPSDPLDMKGGHINDAFMTEDE 217
               P   +D+  G  N  F   D+
Sbjct: 780 ----PYASIDISKGENNPGFQNTDD 800


>gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]
          Length = 255

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 95  TLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCII 154
           T+   +V++     K    + + L    +    +P   +      VP W I   V+ C++
Sbjct: 111 TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVL 170

Query: 155 I-VAIALLILSGIWQRRRKNKEPSEVDDAED 184
           + +AI  LI   + Q RRKN    ++  A D
Sbjct: 171 VALAIVYLIALAVCQCRRKNYGQLDIFPARD 201


>gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens]
          Length = 264

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 95  TLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCII 154
           T+   +V++     K    + + L    +    +P   +      VP W I   V+ C++
Sbjct: 120 TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVL 179

Query: 155 I-VAIALLILSGIWQRRRKNKEPSEVDDAED 184
           + +AI  LI   + Q RRKN    ++  A D
Sbjct: 180 VALAIVYLIALAVCQCRRKNYGQLDIFPARD 210


>gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens]
          Length = 273

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 95  TLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCII 154
           T+   +V++     K    + + L    +    +P   +      VP W I   V+ C++
Sbjct: 129 TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVL 188

Query: 155 I-VAIALLILSGIWQRRRKNKEPSEVDDAED 184
           + +AI  LI   + Q RRKN    ++  A D
Sbjct: 189 VALAIVYLIALAVCQCRRKNYGQLDIFPARD 219


>gi|148728162 protein tyrosine phosphatase, receptor type, J isoform 1
            precursor [Homo sapiens]
          Length = 1337

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 13/91 (14%)

Query: 108  NKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSG-- 165
            NK  I+ A    +  + F +    ++ P DP V     I G +F  I  A+ ++ + G  
Sbjct: 944  NKGLIDGA----ESYVSFSRYSDAVSLPQDPGV-----ICGAVFGCIFGALVIVTVGGFI 994

Query: 166  IWQRRRKNKEPSEV--DDAEDKCENMITIEN 194
             W+++RK+ + +EV     + K   +I +EN
Sbjct: 995  FWRKKRKDAKNNEVSFSQIKPKKSKLIRVEN 1025


>gi|157384977 glutamate receptor, ionotropic, delta 2 [Homo sapiens]
          Length = 1007

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 147 FGVIFCIIIVAIAL----LILSGIWQRRRKNKEPSEVDDAEDKCENMITIENGIPSDPLD 202
           F  +FCI+   I L     +L   W +R+ ++ PS+ DD E   E++    N + +D   
Sbjct: 831 FAGVFCILAAGIVLSCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTD--- 887

Query: 203 MKGGHINDAFMTEDERLTPL 222
                 +  F T    LTPL
Sbjct: 888 --DDSPHKQFSTSSIDLTPL 905


>gi|118130809 endothelial cell-specific chemotaxis regulator [Homo
           sapiens]
          Length = 205

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 130 STLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAE 183
           +T+ P       + +  FGVI  I+I+ + ++IL G+   R K ++  E +D +
Sbjct: 108 ATILPSPTSETVLTVAAFGVISFIVILVVVVIILVGVVSLRFKCRKSKESEDPQ 161


>gi|89063265 PREDICTED: similar to MHC class I antigen [Homo
           sapiens]
          Length = 366

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 13/48 (27%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 145 IIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKCENMITI 192
           +I G+I  ++++ +AL+  + IW+++R  +E  E   +E  C N +++
Sbjct: 319 LIMGIIVGLVLLVVALVAGAVIWRKKRSGREGRE--GSEFSCHNGVSV 364


>gi|16306532 cadherin 11, type 2 preproprotein [Homo sapiens]
          Length = 796

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 146 IFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKCENMITIEN 194
           +  ++ CI+I+ + +++   +   RR+ KEP  V + ED  EN+IT ++
Sbjct: 620 LIAILACIVILLVIVVLFVTL---RRQKKEPLIVFEEEDVRENIITYDD 665


>gi|49170034 integrin, alpha 8 [Homo sapiens]
          Length = 1063

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 134  PPMDPSVPIWIIIFGVIFCIIIVAIALLIL--SGIWQRRRKNKE 175
            P +  S+P+W+II  ++  ++++AI  L L   G + R R  +E
Sbjct: 1004 PNVSFSIPLWVIILAILLGLLVLAILTLALWKCGFFDRARPPQE 1047


>gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens]
          Length = 203

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 128 IPSTLAPPMDPSVPIWIIIFGVIFCIII-VAIALLILSGIWQRRRKNKEPSEVDDAED 184
           +P   +      VP W I   V+ C+++ +AI  LI   + Q RRKN    ++  A D
Sbjct: 92  VPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 149


>gi|223468597 integrin alpha-V isoform 3 precursor [Homo sapiens]
          Length = 1012

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 135 PMDPSVPIWIIIFGVIFCIIIVAIALLIL--SGIWQRRRKNKEPSE 178
           P    VP+W+II  V+  ++++A+ + ++   G ++R R  +E  E
Sbjct: 951 PAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 996


>gi|223468595 integrin alpha-V isoform 2 [Homo sapiens]
          Length = 1002

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 135 PMDPSVPIWIIIFGVIFCIIIVAIALLIL--SGIWQRRRKNKEPSE 178
           P    VP+W+II  V+  ++++A+ + ++   G ++R R  +E  E
Sbjct: 941 PAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 986


>gi|4504763 integrin alpha-V isoform 1 precursor [Homo sapiens]
          Length = 1048

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 135  PMDPSVPIWIIIFGVIFCIIIVAIALLIL--SGIWQRRRKNKEPSE 178
            P    VP+W+II  V+  ++++A+ + ++   G ++R R  +E  E
Sbjct: 987  PAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKRVRPPQEEQE 1032


>gi|16306537 cadherin 20, type 2 preproprotein [Homo sapiens]
          Length = 801

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 146 IFGVIFCI-IIVAIALLILSGIWQRRRKNKEPSEVDDAEDKCENMITIEN 194
           +  ++ CI +++ + LLILS     RR  K+P  +DD E+  EN++  ++
Sbjct: 622 LIAILACIFVLLVLVLLILS----MRRHRKQPYIIDDEENIHENIVRYDD 667


>gi|88758615 integrin alpha 2b preproprotein [Homo sapiens]
          Length = 1039

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 139  SVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAE 183
            ++PIW ++ GV+  ++++ I +L +  +   +R N+ P E DD E
Sbjct: 994  AIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKR-NRPPLEEDDEE 1037


>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
            isoform 1 precursor [Homo sapiens]
          Length = 1948

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 14/81 (17%)

Query: 142  IWII--IFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKC-ENMITIENGIPS 198
            IW+I  +  V+F I IV IA+L+       +RK+ EP        KC  N   +    P 
Sbjct: 1284 IWVIGPVLAVVFIICIV-IAILLYKNKPDSKRKDSEP------RTKCLLNNADLAPHHPK 1336

Query: 199  DPLDMKGGHINDAFMTEDERL 219
            DP++M+   IN  F T D  L
Sbjct: 1337 DPVEMR--RIN--FQTPDSGL 1353


>gi|52485853 integrin, alpha 11 precursor [Homo sapiens]
          Length = 1188

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 137  DPSVPIWIIIFGVIFCIIIVAIALLIL--SGIWQRRRKNKEP 176
            D  VPIWII+   +  ++++A+ +L L   G ++  R+ +EP
Sbjct: 1137 DWQVPIWIIVGSTLGGLLLLALLVLALWKLGFFRSARRRREP 1178


>gi|27477105 lipidosin [Homo sapiens]
          Length = 724

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 86  VVTDPSKNHTLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDP 138
           ++T   +N  +P V ++ A++M    I+NA  + DQ  +FL +  TL   +DP
Sbjct: 570 IITAGGEN--VPPVPIEEAVKMELPIISNAMLIGDQR-KFLSMLLTLKCTLDP 619


>gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo
           sapiens]
          Length = 364

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/63 (25%), Positives = 28/63 (44%)

Query: 129 PSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKCEN 188
           P   +    P V  ++I+  V  CII +AI +L    +W   R   +  +  ++  K E 
Sbjct: 205 PDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQKAEK 264

Query: 189 MIT 191
            +T
Sbjct: 265 EVT 267


>gi|46488946 killer cell immunoglobulin-like receptor, three
           domains, long cytoplasmic tail, 3 [Homo sapiens]
          Length = 410

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 125 FLKIPSTLAPPMDPSVPIWI--------IIFGVIFCIIIVAIALLILSGIWQRRRKNKEP 176
           F  +P   + P DP +P+ +        ++ G    II  AI L  L   W   +KN   
Sbjct: 297 FRALPHAWSDPSDP-LPVSVTGNSRHLHVLIGTSVVIIPFAILLFFLLHRWCANKKN--- 352

Query: 177 SEVDDAEDKCENMITIENGIPSDPLDMKGGHINDAFMTEDERLTP 221
           + V D E      +  E+    DP ++    +N    T+ +   P
Sbjct: 353 AVVMDQEPAGNRTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRP 397


>gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]
          Length = 1072

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 112 INNAFFLNDQTLEFLKIPSTLAPPMDPSVPI----WIIIFGVIFCIIIVAIALLILSGIW 167
           ++NA  ++ Q    L IP T     DPS  I      I+ GV+  I+ V + +LI+    
Sbjct: 843 VSNATAIDSQIARSLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMAR 902

Query: 168 QRRRKNKEPSEV--DDAED 184
             R KNK   E    D ED
Sbjct: 903 YCRSKNKNGYEAGKKDHED 921


>gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]
          Length = 1200

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 112 INNAFFLNDQTLEFLKIPSTLAPPMDPSVPI----WIIIFGVIFCIIIVAIALLILSGIW 167
           ++NA  ++ Q    L IP T     DPS  I      I+ GV+  I+ V + +LI+    
Sbjct: 796 VSNATAIDSQIARSLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMAR 855

Query: 168 QRRRKNKEPSEV--DDAED 184
             R KNK   E    D ED
Sbjct: 856 YCRSKNKNGYEAGKKDHED 874


>gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]
          Length = 1069

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 112 INNAFFLNDQTLEFLKIPSTLAPPMDPSVPI----WIIIFGVIFCIIIVAIALLILSGIW 167
           ++NA  ++ Q    L IP T     DPS  I      I+ GV+  I+ V + +LI+    
Sbjct: 843 VSNATAIDSQIARSLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMAR 902

Query: 168 QRRRKNKEPSEV--DDAED 184
             R KNK   E    D ED
Sbjct: 903 YCRSKNKNGYEAGKKDHED 921


>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
            sapiens]
          Length = 1393

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 139  SVPIWIIIFGVIFCIIIVAIAL---LILSGIWQRRRKNKEPSEVDDAEDK 185
            S P W I+  V+  +I++ + L    ++S + + RR   + ++ +DAED+
Sbjct: 1319 SFPAWAIVIVVLVAVILLLVFLGLIFLVSYMMRTRRTLTQNTQYNDAEDE 1368


>gi|104487611 protein tyrosine phosphatase, receptor type, sigma
           isoform 4 precursor [Homo sapiens]
          Length = 1505

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 142 IWII--IFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKC-ENMITIENGIPS 198
           IW+I  +  V+F I IV IA+L+       +RK+ EP        KC  N   +    P 
Sbjct: 857 IWVIGPVLAVVFIICIV-IAILLYKNKPDSKRKDSEP------RTKCLLNNADLAPHHPK 909

Query: 199 DPLDMK 204
           DP++M+
Sbjct: 910 DPVEMR 915


>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
            isoform 2 precursor [Homo sapiens]
          Length = 1910

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 142  IWII--IFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKC-ENMITIENGIPS 198
            IW+I  +  V+F I IV IA+L+       +RK+ EP        KC  N   +    P 
Sbjct: 1262 IWVIGPVLAVVFIICIV-IAILLYKNKPDSKRKDSEP------RTKCLLNNADLAPHHPK 1314

Query: 199  DPLDMK 204
            DP++M+
Sbjct: 1315 DPVEMR 1320


>gi|104487295 protein tyrosine phosphatase, receptor type, sigma
           isoform 3 precursor [Homo sapiens]
          Length = 1501

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 142 IWII--IFGVIFCIIIVAIALLILSGIWQRRRKNKEPSEVDDAEDKC-ENMITIENGIPS 198
           IW+I  +  V+F I IV IA+L+       +RK+ EP        KC  N   +    P 
Sbjct: 853 IWVIGPVLAVVFIICIV-IAILLYKNKPDSKRKDSEP------RTKCLLNNADLAPHHPK 905

Query: 199 DPLDMK 204
           DP++M+
Sbjct: 906 DPVEMR 911


>gi|94721259 solute carrier family 26, member 6 isoform 4 [Homo
           sapiens]
          Length = 738

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 128 IPSTLAPPMDPSVPIWIIIFGVIFCIIIVAIALLILSG 165
           IP+ L PP+ P+  ++  + G  F I +V  A+ I  G
Sbjct: 305 IPAGLVPPVAPNTQLFSKLVGSAFTIAVVGFAIAISLG 342


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,266,520
Number of Sequences: 37866
Number of extensions: 319655
Number of successful extensions: 1176
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1156
Number of HSP's gapped (non-prelim): 42
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.