Guide to the Human Genome
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Name: KIAA1430 Sequence: fasta or formatted (532aa) NCBI GI: 149944410
Description:

hypothetical protein LOC57587

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         18           2
 C cysteine            1.1          6           1
 D aspartate           7.1         38           2
 E glutamate           7.0         37           2
 F phenylalanine       2.1         11           2
 G glycine             4.7         25           1
 H histidine           3.6         19           2
 I isoleucine          3.0         16           1
 K lysine             11.1         59           2
 L leucine             7.3         39           2
 M methionine          1.1          6           1
 N asparagine          4.3         23           2
 P proline             6.0         32           2
 Q glutamine           3.9         21           2
 R arginine            5.5         29           3
 S serine             15.2         81           7
 T threonine           5.5         29           2
 V valine              5.3         28           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.6         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57587 
MED1                  0.028   mediator complex subunit 1 
DSPP                  0.027   dentin sialophosphoprotein preproprotein 
CYLC1                 0.023   cylicin, basic protein of sperm head cytoskeleton 1...
SON                   0.022   SON DNA-binding protein isoform F 
SON                   0.022   SON DNA-binding protein isoform B 
MLLT3                 0.022   myeloid/lymphoid or mixed-lineage leukemia (trithor...
CCDC91                0.021   GGA binding partner 
TNRC18                0.021   trinucleotide repeat containing 18 
TOPORS                0.019   topoisomerase I binding, arginine/serine-rich 
PPIG                  0.019   peptidylprolyl isomerase G 
FAM133A               0.019   hypothetical protein LOC286499 
CWC22                 0.018   CWC22 spliceosome-associated protein homolog 
FAM133B               0.018   hypothetical protein LOC257415 isoform 2 
FAM133B               0.018   hypothetical protein LOC257415 isoform 1 
CHD9                  0.017   chromodomain helicase DNA binding protein 9 
NOLC1                 0.017   nucleolar and coiled-body phosphoprotein 1 
ATRX                  0.017   transcriptional regulator ATRX isoform 2 
ATRX                  0.017   transcriptional regulator ATRX isoform 1 
ANK3                  0.016   ankyrin 3 isoform 1 
ANK2                  0.016   ankyrin 2 isoform 1 
SAFB2                 0.015   scaffold attachment factor B2 
BRDT                  0.015   testis-specific bromodomain protein 
BRDT                  0.015   testis-specific bromodomain protein 
PRPF40B               0.015   Huntingtin interacting protein C isoform 2 
PRPF40B               0.015   Huntingtin interacting protein C isoform 1 
CCDC88A               0.014   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.014   coiled-coil domain containing 88A isoform 1 
PCF11                 0.014   pre-mRNA cleavage complex II protein Pcf11 
HMGXB4                0.014   high-mobility group protein 2-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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