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Search of human proteins with 7706637
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706637 protein inhibitor of activated STAT, 1 [Homo
sapiens]
(651 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens] 1310 0.0
gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens] 691 0.0
gi|56699458 protein inhibitor of activated STAT X isoform beta [... 644 0.0
gi|27532984 protein inhibitor of activated STAT X isoform alpha ... 622 e-178
gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens] 436 e-122
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 87 6e-17
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 87 6e-17
gi|31543543 retinoic acid induced 17 [Homo sapiens] 83 9e-16
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 43 0.001
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 40 0.005
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 36 0.097
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 36 0.13
gi|148539591 INO80 complex subunit D [Homo sapiens] 35 0.28
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 34 0.37
gi|83367077 mucin 16 [Homo sapiens] 34 0.48
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo... 34 0.48
gi|4758184 tRNA aspartic acid methyltransferase 1 isoform a [Hom... 33 0.82
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 33 0.82
gi|34740327 zinc finger protein 804A [Homo sapiens] 33 1.1
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 32 1.4
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 32 1.4
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens] 32 1.4
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 1.4
gi|38201677 teashirt family zinc finger 1 [Homo sapiens] 32 1.4
gi|21450665 coiled-coil domain containing 138 [Homo sapiens] 32 1.4
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 32 1.8
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 32 1.8
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 32 1.8
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 32 1.8
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 32 1.8
>gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]
Length = 651
Score = 1310 bits (3389), Expect = 0.0
Identities = 651/651 (100%), Positives = 651/651 (100%)
Query: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL
Sbjct: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
Query: 61 YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHEL 120
YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHEL
Sbjct: 61 YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHEL 120
Query: 121 ELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQ 180
ELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQ
Sbjct: 121 ELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQ 180
Query: 181 ISSSMDISGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNG 240
ISSSMDISGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNG
Sbjct: 181 ISSSMDISGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNG 240
Query: 241 VEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAK 300
VEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAK
Sbjct: 241 VEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAK 300
Query: 301 GIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDAT 360
GIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDAT
Sbjct: 301 GIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDAT 360
Query: 361 LYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAPMRSKK 420
LYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAPMRSKK
Sbjct: 361 LYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAPMRSKK 420
Query: 421 EVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEEPSAKRT 480
EVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEEPSAKRT
Sbjct: 421 EVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEEPSAKRT 480
Query: 481 CPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFHMTPMPYDL 540
CPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFHMTPMPYDL
Sbjct: 481 CPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFHMTPMPYDL 540
Query: 541 QGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLDQLSAGGSTS 600
QGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLDQLSAGGSTS
Sbjct: 541 QGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLDQLSAGGSTS 600
Query: 601 LPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTASIFGIIPDIISLD 651
LPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTASIFGIIPDIISLD
Sbjct: 601 LPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTASIFGIIPDIISLD 651
>gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]
Length = 628
Score = 691 bits (1784), Expect = 0.0
Identities = 383/662 (57%), Positives = 466/662 (70%), Gaps = 45/662 (6%)
Query: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
MA+ ELK MVMS RVSELQVLLG+AGRNK GRKHELL KALHLLK+ C+P+VQMKIKEL
Sbjct: 1 MAELGELKHMVMSFRVSELQVLLGFAGRNKSGRKHELLAKALHLLKSSCAPSVQMKIKEL 60
Query: 61 YRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSP---LLPVSLLGPK 117
YRRRFP+K + P+DLS+ +L P T P + G A P L P +LLGPK
Sbjct: 61 YRRRFPRKTLGPSDLSL---------LSLPPGTSP-VGSPGPLAPIPPTLLAPGTLLGPK 110
Query: 118 HELEL-PHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQ 176
E+++ P L PVHPD+ ++ LPFY++ ELI+PT+LAS +SQRF E F FALTPQ
Sbjct: 111 REVDMHPPLPQ---PVHPDVTMKPLPFYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQ 167
Query: 177 QVQQISSSMDI-SGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLP 235
QVQQI +S ++ G KCD+T+QVQLRFCL ETSCPQED+FPPNL VKVN K C LPGYLP
Sbjct: 168 QVQQILTSREVLPGAKCDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLP 227
Query: 236 PTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQ 295
PTKNG EPKRPSRPINIT L RLS TVPNTIVV+W++E GRNYS++VYLV+QL++ LLQ
Sbjct: 228 PTKNGAEPKRPSRPINITPLARLSATVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQ 287
Query: 296 RLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQ 355
+LRAKGIRNPDHSRALIKEKLTADPDSE+ATTSLRVSL+CPLGKMRLT+PCRALTC+HLQ
Sbjct: 288 KLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQ 347
Query: 356 CFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAP 415
FDA LY+QMNEKKPTW CPVCDKKAPYE LIIDGLFMEIL C+DCDEIQF EDG+W P
Sbjct: 348 SFDAALYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSCSDCDEIQFMEDGSWCP 407
Query: 416 MRSKKEVQEVSASYN-GVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEE 474
M+ KKE EV G+DG L++ S KKVEVIDLTI+SSSDEE+
Sbjct: 408 MKPKKEASEVCPPPGYGLDG-----LQYSPVQGGDPSENKKKVEVIDLTIESSSDEEDLP 462
Query: 475 PSAKRTCPSLSPTSPL--NNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFH 532
P+ K+ C S P +KG+L+ HQ S V R+P++ + ++++ + +Y F
Sbjct: 463 PT-KKHCSVTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAF- 520
Query: 533 MTPMPYDLQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSS-QMFLD 591
P+ D+QGLD F FL ++QHY S++ + D+QD L FF Y + FL
Sbjct: 521 --PLGADIQGLDLFSFLQTESQHYGPSVITSL-----DEQDAL--GHFFQYRGTPSHFLG 571
Query: 592 QLSAG-GSTSLPTTNGSSSGSNSSLVS-SNSLRESHSHTVTNRSSTDTASIFGIIPDIIS 649
L+ GS+ T G SS+V+ +LRE H + + S+ G DIIS
Sbjct: 572 PLAPTLGSSHCSATPAPPPGRVSSIVAPGGALREGHGGPLPS-----GPSLTGCRSDIIS 626
Query: 650 LD 651
LD
Sbjct: 627 LD 628
>gi|56699458 protein inhibitor of activated STAT X isoform beta
[Homo sapiens]
Length = 621
Score = 644 bits (1661), Expect = 0.0
Identities = 366/666 (54%), Positives = 451/666 (67%), Gaps = 60/666 (9%)
Query: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
MAD EL+ MV S RVSELQVLLG+AGRNK GRKH+LL +ALHLLK+GCSPAVQ+KI+EL
Sbjct: 1 MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60
Query: 61 YRRRFPQKIMTPADLSIPNVH-------SSPMPATLSPS---TIPQLTYDGHPASSPLLP 110
YRRR+P+ + +DLS SSP+ L+ + ++P + H SSP+
Sbjct: 61 YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120
Query: 111 VSLLGPKHELELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFA 170
V L K E+ + + PVHPD++L+ LPFYD+LD LIKPTSL + QRF+E F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIPPVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFFI 180
Query: 171 FALTPQQVQQISSSMD-ISGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCS 229
FALTPQQV++I S D + G + D+TVQVQLR CL+ETSCPQED++P +LC+KVN K
Sbjct: 181 FALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLFP 240
Query: 230 LPGYLPPTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLS 289
LPGY PP KNG+E KRP RP+NITSLVRLS+ VPN I +SW +EIG+NYSM+VYLV+QL+
Sbjct: 241 LPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQLT 300
Query: 290 STVLLQRLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRAL 349
S +LLQRL+ KGIRNPDHSRALIKEKLTADPDSEIATTSLRVSL+CPLGKMRLTIPCRA+
Sbjct: 301 SAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRAV 360
Query: 350 TCSHLQCFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKE 409
TC+HLQCFDA LY+QMNEKKPTW+CPVCDKKA YE LI+DGLFMEIL C+D DEI+F+E
Sbjct: 361 TCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQE 420
Query: 410 DGTWAPMRSKKEVQEVSAS-YNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSS 468
DG+W PMR KKE +VS+ ++ SS L + S KKV+VIDLTI+SSS
Sbjct: 421 DGSWCPMRPKKEAMKVSSQPCTKIES--SSVLSKPCSVTVASEASKKKVDVIDLTIESSS 478
Query: 469 DEEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYR 528
D EEE+P AKR C +S T KG+L +Q S V R PS+ +VD + I SL DY
Sbjct: 479 D-EEEDPPAKRKCIFMSETQSSPTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSL-TDYS 533
Query: 529 HPFHMTP---MPYDLQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTS 585
PFH TP M DL GLDF + D Q+
Sbjct: 534 VPFHHTPISSMSSDLPGLDFLSLIPVDPQY-----------------------------C 564
Query: 586 SQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTASIFGIIP 645
MFLD L++ + S + +SS +S+ VSS+S R S + +T+ S IP
Sbjct: 565 PPMFLDSLTSPLTASSTSVTTTSSHESSTHVSSSSSR-SETGVITSSGSN--------IP 615
Query: 646 DIISLD 651
DIISLD
Sbjct: 616 DIISLD 621
>gi|27532984 protein inhibitor of activated STAT X isoform alpha
[Homo sapiens]
Length = 572
Score = 622 bits (1605), Expect = e-178
Identities = 336/557 (60%), Positives = 408/557 (73%), Gaps = 22/557 (3%)
Query: 1 MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKEL 60
MAD EL+ MV S RVSELQVLLG+AGRNK GRKH+LL +ALHLLK+GCSPAVQ+KI+EL
Sbjct: 1 MADFEELRNMVSSFRVSELQVLLGFAGRNKSGRKHDLLMRALHLLKSGCSPAVQIKIREL 60
Query: 61 YRRRFPQKIMTPADLSIPNVH-------SSPMPATLSPS---TIPQLTYDGHPASSPLLP 110
YRRR+P+ + +DLS SSP+ L+ + ++P + H SSP+
Sbjct: 61 YRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLAVAGIHSLPSTSVTPHSPSSPVGS 120
Query: 111 VSLLGPKHELELPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFA 170
V L K E+ + + PVHPD++L+ LPFYD+LD LIKPTSL + QRF+E F
Sbjct: 121 VLLQDTKPTFEMQQPSPPIPPVHPDVQLKNLPFYDVLDVLIKPTSLVQSSIQRFQEKFFI 180
Query: 171 FALTPQQVQQISSSMD-ISGTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCS 229
FALTPQQV++I S D + G + D+TVQVQLR CL+ETSCPQED++P +LC+KVN K
Sbjct: 181 FALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAETSCPQEDNYPNSLCIKVNGKLFP 240
Query: 230 LPGYLPPTKNGVEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLS 289
LPGY PP KNG+E KRP RP+NITSLVRLS+ VPN I +SW +EIG+NYSM+VYLV+QL+
Sbjct: 241 LPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQISISWASEIGKNYSMSVYLVRQLT 300
Query: 290 STVLLQRLRAKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRAL 349
S +LLQRL+ KGIRNPDHSRALIKEKLTADPDSEIATTSLRVSL+CPLGKMRLTIPCRA+
Sbjct: 301 SAMLLQRLKMKGIRNPDHSRALIKEKLTADPDSEIATTSLRVSLMCPLGKMRLTIPCRAV 360
Query: 350 TCSHLQCFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKE 409
TC+HLQCFDA LY+QMNEKKPTW+CPVCDKKA YE LI+DGLFMEIL C+D DEI+F+E
Sbjct: 361 TCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEILNDCSDVDEIKFQE 420
Query: 410 DGTWAPMRSKKEVQEVSAS-YNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSS 468
DG+W PMR KKE +VS+ ++ SS L + S KKV+VIDLTI+SSS
Sbjct: 421 DGSWCPMRPKKEAMKVSSQPCTKIES--SSVLSKPCSVTVASEASKKKVDVIDLTIESSS 478
Query: 469 DEEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYR 528
D EEE+P AKR C +S T KG+L +Q S V R PS+ +VD + I SL DY
Sbjct: 479 D-EEEDPPAKRKCIFMSETQSSPTKGVLM--YQPSSV-RVPSVTSVDPAAIPPSL-TDYS 533
Query: 529 HPFHMTP---MPYDLQG 542
PFH TP M DL G
Sbjct: 534 VPFHHTPISSMSSDLPG 550
>gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]
Length = 510
Score = 436 bits (1121), Expect = e-122
Identities = 244/513 (47%), Positives = 323/513 (62%), Gaps = 46/513 (8%)
Query: 2 ADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLLKAGCSPAVQMKIKELY 61
A+ E K MVMS RVS+LQ+LLG+ GR+K G KHEL+T+AL L++ CSP + KIKELY
Sbjct: 3 AELVEAKNMVMSFRVSDLQMLLGFVGRSKSGLKHELVTRALQLVQFDCSPELFKKIKELY 62
Query: 62 RRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELE 121
R+ +K PA P H P T+ + P + P + +L K+
Sbjct: 63 ETRYAKKNSEPA----PQPHRPLDPLTMHSTYDRAGAVPRTPLAGPNIDYPVLYGKYLNG 118
Query: 122 LPHLTSALHPVHPDIKLQKLPFYDLLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQI 181
L L + + P+++L KLPF+++LDEL+KPT L N+++ +E+ FALTP+QV+ I
Sbjct: 119 LGRLPAKT--LKPEVRLVKLPFFNMLDELLKPTELVPQNNEKLQESPCIFALTPRQVELI 176
Query: 182 SSSMDIS-GTKCDFTVQVQLRFCLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNG 240
+S ++ G K VQV LR C S+TSCPQED +PPN+ VKVN CS+PGY P K G
Sbjct: 177 RNSRELQPGVKA---VQVVLRICYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPG 233
Query: 241 VEPKRPSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAK 300
VEPKRP RPIN+T L+ LS+ N I V+W G++YS+A+YLV+QL+S+ LLQRL+
Sbjct: 234 VEPKRPCRPINLTHLMYLSSAT-NRITVTW-GNYGKSYSVALYLVRQLTSSELLQRLKTI 291
Query: 301 GIRNPDHSRALIKEKLTADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDAT 360
G+++P+ +AL+KEKL DPDSEIATT +RVSL+CPL KMRL++PCRA TC+HLQCFDA
Sbjct: 292 GVKHPELCKALVKEKLRLDPDSEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAV 351
Query: 361 LYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYCTDCDEIQFKEDGTWAPMRSKK 420
Y+QMNEKKPTW+CPVCDK APY+ LIIDGL +IL C D DEI++ DG+W P+R++K
Sbjct: 352 FYLQMNEKKPTWMCPVCDKPAPYDQLIIDGLLSKILSECEDADEIEYLVDGSWCPIRAEK 411
Query: 421 EVQ------------------EVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDL 462
E + S NG G L ST N +V+DL
Sbjct: 412 ERSCSPQGAILVLGPSDANGLLPAPSVNG-SGALGSTGGGGPVG--SMENGKPGADVVDL 468
Query: 463 TIDSSS-------------DEEEEEPSAKRTCP 482
T+DSSS DE+EE P KR CP
Sbjct: 469 TLDSSSSSEDEEEEEEEEEDEDEEGPRPKRRCP 501
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 86.7 bits (213), Expect = 6e-17
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 24/237 (10%)
Query: 198 VQLRF-CLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNGVEPKRPSRPINITSLV 256
++L+F C ++P ++ V VN P ++ + G + K +P+ + +
Sbjct: 465 LELQFKCYHHEDRQMNTNWPASVQVSVNATPLTI-------ERG-DNKTSHKPLYLKHVC 516
Query: 257 RLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAKGIRNPDHSRALIKEKL 316
+ NTI ++ TA ++ + LV + S +LQ L K + +H IK
Sbjct: 517 QPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNF 572
Query: 317 -------TADPDSE--IATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDATLYIQMNE 367
T P+ E + T+++VSL CP+ R+ +P R C H+QCFD Y+Q+N
Sbjct: 573 SSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNC 632
Query: 368 KKPTWVCPVCDKKAPYEHLIIDGLFMEILKYC--TDCDEIQFKEDGTWAPMRSKKEV 422
++ TW CPVC+K A E L +D + IL Y +D +EI +W P+ K ++
Sbjct: 633 ERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDM 689
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 86.7 bits (213), Expect = 6e-17
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 24/237 (10%)
Query: 198 VQLRF-CLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNGVEPKRPSRPINITSLV 256
++L+F C ++P ++ V VN P ++ + G + K +P+ + +
Sbjct: 439 LELQFKCYHHEDRQMNTNWPASVQVSVNATPLTI-------ERG-DNKTSHKPLYLKHVC 490
Query: 257 RLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAKGIRNPDHSRALIKEKL 316
+ NTI ++ TA ++ + LV + S +LQ L K + +H IK
Sbjct: 491 QPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNF 546
Query: 317 -------TADPDSE--IATTSLRVSLLCPLGKMRLTIPCRALTCSHLQCFDATLYIQMNE 367
T P+ E + T+++VSL CP+ R+ +P R C H+QCFD Y+Q+N
Sbjct: 547 SSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNC 606
Query: 368 KKPTWVCPVCDKKAPYEHLIIDGLFMEILKYC--TDCDEIQFKEDGTWAPMRSKKEV 422
++ TW CPVC+K A E L +D + IL Y +D +EI +W P+ K ++
Sbjct: 607 ERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDM 663
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 82.8 bits (203), Expect = 9e-16
Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 54/369 (14%)
Query: 72 PADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHP 131
P + + N SP+P +P P G L P + P ++ SAL P
Sbjct: 499 PRPVPVANYPHSPVPGNPTPPMTP-----GSSIPPYLSPSQDVKPPFPPDIKPNMSALPP 553
Query: 132 V---HPDIKLQKLPFYD--LLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQISSSMD 186
H D P D +L+ +LA N F L P Q + D
Sbjct: 554 PPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNH--------VFHLRPTVHQTLMWRSD 605
Query: 187 ISGTKCDFTVQVQLRF-CLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNGVEPKR 245
+ +L+F C ++P ++ V VN P ++ + G + K
Sbjct: 606 L-----------ELQFKCYHHEDRQMNTNWPASVQVSVNATPLTI-------ERG-DNKT 646
Query: 246 PSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAKGIRNP 305
+P+++ + + NTI ++ TA ++ + LV + S +LQ L K +
Sbjct: 647 SHKPLHLKHVCQPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPA 702
Query: 306 DHSRALIKEKL----------TADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQ 355
+H IK T + + + T+++VSL CP+ R+ +P R C H+Q
Sbjct: 703 EHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQ 762
Query: 356 CFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYC--TDCDEIQFKEDGTW 413
CFD Y+Q+N ++ TW CPVC+K A E L +D IL ++ +E+ +W
Sbjct: 763 CFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSW 822
Query: 414 APMRSKKEV 422
P+ K ++
Sbjct: 823 RPVPIKSDL 831
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 42.7 bits (99), Expect = 0.001
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 463 TIDSSSDEEEEEPSAKRTCPSLSPTSPLNNKGIL-------SLPHQASPVSRTPSLPAVD 515
T DS+S S+ + ++S ++P + I S P S ++ T S P
Sbjct: 401 TTDSTSHSTPSFTSSITSTETISHSTPSFSSLITATKTTSHSTPSLTSLITTTKSTPHNA 460
Query: 516 TSYINTSLIQDYRHPFHMTPMPYDLQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLL 575
+S+ + S + + H H +P Q LDFF HYN L + ++ +
Sbjct: 461 SSFTSYSQLHFFDH-HHRGHIPQYSQ-LDFF-------DHYNRDHLTQFTSLITTTKTTS 511
Query: 576 HSSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSST 635
HS F + S TS T ++S S S SS++ E+HSH+ SS+
Sbjct: 512 HSPPSFTALITSTKTTSHSTPSFTSSIATTETTSHSPPSFTSSSTTTETHSHSTPGFSSS 571
Query: 636 DTAS 639
S
Sbjct: 572 IATS 575
Score = 32.7 bits (73), Expect = 1.1
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 576 HSSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSST 635
HS+ F + + M S+ TSL T GS+S S +S SS + E+ SH+ + +S+
Sbjct: 886 HSTPSFTSSITTMETTSRSSPSFTSLITITGSTSHSTASFTSSITTTETTSHSTPSITSS 945
Query: 636 DTAS 639
T +
Sbjct: 946 VTTA 949
Score = 30.4 bits (67), Expect = 5.3
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 576 HSSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSST 635
HS+ F + + S+ TSL T GS+S S +S SS + E+ SH+ + +S+
Sbjct: 101 HSTPSFTSSITTTETTSQSSPSFTSLITITGSTSHSTASFTSSITTTETTSHSTRSITSS 160
Query: 636 DTAS 639
T +
Sbjct: 161 ITTT 164
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 40.4 bits (93), Expect = 0.005
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 12/223 (5%)
Query: 422 VQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNK-KVEVIDLTIDSSSDEEEEEPSAKRT 480
V+ V S N L +E ++ + + + K V L ++ S+E+EE+ S +
Sbjct: 411 VESVEPSENEASKELEPEMEFEIEPDKECKSLSPGKENVSALDMEKESEEKEEKESEPQP 470
Query: 481 CPSLSPTSPLNNKGILSLPHQASPV--SRTPSLPAVDTSYINTSLIQDYRHPFHMTPMPY 538
P P ++ L L Q+ PV S+ PS P + + Q + H+ P
Sbjct: 471 EPVAQPQP--QSQPQLQLQSQSQPVLQSQPPSQPEDLSLAVLQPTPQVTQEQGHLLPERK 528
Query: 539 D-------LQGLDFFPFLSGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLD 591
D L + P L+ + + + + + + ++ SR +SS
Sbjct: 529 DFPVESVKLTEVPVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSST 588
Query: 592 QLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSS 634
S+G S+S +++ SS S+SS S +S R+S S T ++ S
Sbjct: 589 SSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSES 631
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.097
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 22/210 (10%)
Query: 451 SNKNKKVEVIDLTIDSSSDEEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQA-SPVSRTP 509
S+ N + +S+S SA T S ++P+ I + + S S T
Sbjct: 184 SHSNPSFTSLITATESTSHSPPSFTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTS 243
Query: 510 SLPAVDTSYINT----SLIQDYRHPFHMTPMPYDLQGLDFFPFLSGDNQHYNTSLLAAAA 565
S+ + +T +T SLI + H TP L ++ N ++T L +
Sbjct: 244 SITSTETISHSTPSFSSLITATKTTSHSTPSLTSL--------ITTTNTSHSTPSLTSL- 294
Query: 566 AAVSDDQDLLHSSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESH 625
V+ + HS+ F + + S TS TT G++S S S ++ ES
Sbjct: 295 --VTSTETASHSTPSFTSLITTIEATSHSTPSLTSSITTTGTTSHSTPSFTYLTTITEST 352
Query: 626 SHTVTNRSSTDTA------SIFGIIPDIIS 649
SH+ + +S T SI G P IIS
Sbjct: 353 SHSTPSLTSAITTTETMSHSILGFTPSIIS 382
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 35.8 bits (81), Expect = 0.13
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 408 KEDGTWAPMRSKKEVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSS 467
K G+WAP + + ++ S+ +++ ++ K ++ + + D
Sbjct: 1053 KSKGSWAPKKEPYAREMLAISF--------------ISAVNRKRKKRREARGLGSSTDDD 1098
Query: 468 SDEEEEEPSAKRTCPSLS--PTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYI 519
S++E +P A T P P PL P + SP + PA DT I
Sbjct: 1099 SEQEAHKPGAGATAPGTQERPQGPLPGAVAPEAPGRLSPPAAPEERPAADTRSI 1152
>gi|148539591 INO80 complex subunit D [Homo sapiens]
Length = 1027
Score = 34.7 bits (78), Expect = 0.28
Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 447 HHQSSNKNKKVEVIDLTIDSSSDEEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQASPVS 506
H Q KK + LT ++ P P L+ +SLP +AS +
Sbjct: 528 HQQQRKPRKKTKPPALTKKHKKKRRRGPRRPQKPIPPAVPQGNLSMPASVSLPVEASHI- 586
Query: 507 RTPSLPAVDTSYINTSL---IQDYRHPFHMTP---------MPYDLQGLDFFPFLSGD 552
R+PS P + + + I D H + +P DLQ DFF +GD
Sbjct: 587 RSPSTPELSADELPDDIANEITDIPHDLELNQEDFSDVLPRLPDDLQDFDFFEGKNGD 644
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 34.3 bits (77), Expect = 0.37
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 467 SSDEEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQASPVSRTPSLPA 513
SS + S R+C S+S P N+ ++SLPHQ S P P+
Sbjct: 763 SSTPKPPGTSEPRSCSSISTALPQVNEDLVSLPHQLPEASEPPQSPS 809
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.9 bits (76), Expect = 0.48
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 470 EEEEEPSAKRTCPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRH 529
EE S+ + P+++ SP+++ S+P PV+ P+ + + T+ +
Sbjct: 5330 EETSSVSSLMSSPAMTSPSPVSSTSPQSIPSSPLPVTALPT-----SVLVTTTDVLGTTS 5384
Query: 530 PFHMTPMPYDLQGLDF-FPFLSGDNQHYNTSLLAAAAAAVSD----------DQDLL--- 575
P +T P +L + P D H ++ + AV++ +L
Sbjct: 5385 PESVTSSPPNLSSITHERPATYKDTAHTEAAMHHSTNTAVTNVGTSGSGHKSQSSVLADS 5444
Query: 576 HSSRFFPYTSSQMFLDQLSAGGST-SLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSS 634
+S+ P S+ L S ST ++ TN + +SL S LRES + T+ S+
Sbjct: 5445 ETSKATPLMSTTSTLGDTSVSTSTPNISQTNQIQTEPTASL--SPRLRESSTSEKTS-ST 5501
Query: 635 TDTASIFGIIP 645
T+T + F +P
Sbjct: 5502 TETNTAFSYVP 5512
>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
sapiens]
Length = 1199
Score = 33.9 bits (76), Expect = 0.48
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 417 RSKKEVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEEPS 476
+S+KE E + + D +SS + Q Q+ ++ + E++D D S +E EE
Sbjct: 476 QSEKERPEEARELDSSDRDISSATDLQP---DQAETEDTEEELVDGLEDCCSRDENEEEE 532
Query: 477 AKRTCPSLSPTSPLNNKGILS 497
C SLS SP + ++S
Sbjct: 533 GDSECSSLSAVSPSESVAMIS 553
>gi|4758184 tRNA aspartic acid methyltransferase 1 isoform a [Homo
sapiens]
Length = 391
Score = 33.1 bits (74), Expect = 0.82
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 24/118 (20%)
Query: 43 HLLKAGCSPA-------VQMKIKELYRRRFPQKIMTPADLSIPNVHSSPMPATLSPSTIP 95
H L+ C PA V E+Y+ FP H+ + T+ T+
Sbjct: 18 HALRESCIPAQVVAAIDVNTVANEVYKYNFP--------------HTQLLAKTIEGITLE 63
Query: 96 Q---LTYDGHPASSPLLPVSLLGPKHELELPHLTSALHPVHPDIKLQKLPFYDLLDEL 150
+ L++D S P P + +G + ++ S LH + +LQKLP Y LL+ +
Sbjct: 64 EFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENV 121
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 33.1 bits (74), Expect = 0.82
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 77 IPNVHSSPMP-ATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHP 131
IP+ ++P P T+ P+T+P T HP ++P H PH T+ HP
Sbjct: 1256 IPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTP----------HPTTTPHPTTTPHP 1301
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 32.7 bits (73), Expect = 1.1
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 35 HELLTKALHLLKAGCSPAVQMKIKELY-RRRFPQKIMTPADLSIPNVHSSPMPATLSPST 93
H +L + A + A K L ++F +I S+P + P+ L P
Sbjct: 1100 HTVLQQHAAAAAAAAAAAAAGTFKVLQPHQQFLSQIPALTRTSLPQLSVGPVGPRLCPGN 1159
Query: 94 IPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHP 131
P P P++P S+L P H L P L AL P
Sbjct: 1160 QPTFVA---PPQMPIIPASVLHPSH-LAFPSLPHALFP 1193
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 32.3 bits (72), Expect = 1.4
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 78 PNVHSSPMPATLS-PSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALH-PVHPD 135
P+ HSS P T S PST P + HP + + S+ P H P + S++H P H
Sbjct: 130 PSTHSSIHPPTHSHPSTHPLIHPSIHPPTHSPIHPSIHPPTHPPTHPSIHSSIHLPTHSS 189
Query: 136 I 136
I
Sbjct: 190 I 190
Score = 30.8 bits (68), Expect = 4.1
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 78 PNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHP-VHPDI 136
P +H S P T SP P + HP + P + S+ P H P S +HP +HP
Sbjct: 148 PLIHPSIHPPTHSPIH-PSIHPPTHPPTHPSIHSSIHLPTHSSIHPPTHSFIHPSIHP-- 204
Query: 137 KLQKLPFYDLLDELIKPTSLASDNS 161
P + + L P SD+S
Sbjct: 205 -----PTHSPIHPLTHPFIHPSDSS 224
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 32.3 bits (72), Expect = 1.4
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 550 SGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLDQL---SAGGSTSLPTTNG 606
S DN NTS+L SD+++ + + T+ + D TS+P++ G
Sbjct: 380 SPDNGTSNTSMLEDDLKLSSDEEE--NEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKG 437
Query: 607 SSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
SSS S+S SS+S ES S + + S+ + S
Sbjct: 438 SSSSSSSGSSSSSSDSESSSGSDSETESSSSES 470
>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
Length = 1226
Score = 32.3 bits (72), Expect = 1.4
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 550 SGDNQHYNTSLLAAAAAAVSDDQDLLHSSRFFPYTSSQMFLDQL---SAGGSTSLPTTNG 606
S DN NTS+L SD+++ + + T+ + D TS+P++ G
Sbjct: 355 SPDNGTSNTSMLEDDLKLSSDEEE--NEQQAAQRTALRALSDSAVVQQPNCRTSVPSSKG 412
Query: 607 SSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
SSS S+S SS+S ES S + + S+ + S
Sbjct: 413 SSSSSSSGSSSSSSDSESSSGSDSETESSSSES 445
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.3 bits (72), Expect = 1.4
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 577 SSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTD 636
SSR SS S+ S+S +++ SSS S+SS SS+S S S + ++ SS+
Sbjct: 2606 SSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2665
Query: 637 TAS 639
++S
Sbjct: 2666 SSS 2668
Score = 32.0 bits (71), Expect = 1.8
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 565 AAAVSDDQDLLHSSRFFPYTSSQMFLDQLSAGGSTSLPTTNGSSSGSNSSLVSSNSLRES 624
+AA S SS +SS S+ S+S +++ SSS S+SS SS+S S
Sbjct: 2603 SAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2662
Query: 625 HSHTVTNRSSTDTAS 639
S + ++ S+TD S
Sbjct: 2663 SSSSSSSSSTTDEDS 2677
>gi|38201677 teashirt family zinc finger 1 [Homo sapiens]
Length = 1032
Score = 32.3 bits (72), Expect = 1.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTASIFGIIPD 646
+ G +TS P+T+ SSS S+SS S++S H + S +G++P+
Sbjct: 122 TTGPTTSTPSTSCSSSTSHSSTTSTSSSSGYDWHQAALAKTLQQTSSYGLLPE 174
>gi|21450665 coiled-coil domain containing 138 [Homo sapiens]
Length = 665
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/125 (20%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 420 KEVQEVSASYNGVDGCLSSTLEHQVASHHQSSNKNKKVEVIDLTIDSSSDEEEEEPSAKR 479
KE + + +S++ + L+ TL+ Q+ +++S +N+K+++ + + D + +
Sbjct: 263 KETKRLRSSFDALKE-LNDTLKKQL---NEASEENRKIDIQAKRVQARLDNLQRKYEFM- 317
Query: 480 TCPSLSPTSPLNNKGILSLPHQASPVSRTPSLPAVDTSYINTSLIQDYRHPFHMTPMPYD 539
T L +S ++ + SL + +PVS+T +P Y ++ D+ H++ + ++
Sbjct: 318 TIQRLKGSSHAVHE-MKSLKQEKAPVSKTYKVPLNGQVYELLTVFMDWISDHHLSKVKHE 376
Query: 540 LQGLD 544
G+D
Sbjct: 377 ESGMD 381
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
S+ S+ T+ GSSSGS+SS SS S S S + ++ SS+ + S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
S+ S+ T+ GSSSGS+SS SS S S S + ++ SS+ + S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
S+ S+ T+ GSSSGS+SS SS S S S + ++ SS+ + S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
S+ S+ T+ GSSSGS+SS SS S S S + ++ SS+ + S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 594 SAGGSTSLPTTNGSSSGSNSSLVSSNSLRESHSHTVTNRSSTDTAS 639
S+ S+ T+ GSSSGS+SS SS S S S + ++ SS+ + S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,189,872
Number of Sequences: 37866
Number of extensions: 1297186
Number of successful extensions: 5959
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 5606
Number of HSP's gapped (non-prelim): 364
length of query: 651
length of database: 18,247,518
effective HSP length: 109
effective length of query: 542
effective length of database: 14,120,124
effective search space: 7653107208
effective search space used: 7653107208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.