Guide to the Human Genome
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Name: LRIG2 Sequence: fasta or formatted (1065aa) NCBI GI: 7662320
Description:

leucine-rich repeats and immunoglobulin-like domains 2

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         65           3
 C cysteine            2.3         25           2
 D aspartate           4.9         52           2
 E glutamate           6.5         69           2
 F phenylalanine       3.4         36           2
 G glycine             5.4         58           2
 H histidine           2.6         28           1
 I isoleucine          6.2         66           2
 K lysine              3.4         36           2
 L leucine            12.3        131           4
 M methionine          2.3         25           1
 N asparagine          6.3         67           3
 P proline             5.3         56           2
 Q glutamine           4.6         49           2
 R arginine            4.9         52           2
 S serine              8.9         95           3
 T threonine           6.1         65           2
 V valine              4.6         49           3
 W tryptophan          1.4         15           1
 Y tyrosine            2.4         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-rich repeats and immunoglobulin-like domains ... 
LRIG3                 0.523   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.512   leucine-rich repeats and immunoglobulin-like domain...
LRIG1                 0.413   leucine-rich repeats and immunoglobulin-like domains...
PXDN                  0.084   peroxidasin 
PXDNL                 0.082   peroxidasin homolog-like 
CPN2                  0.061   carboxypeptidase N, polypeptide 2, 83kD 
LINGO3                0.060   leucine rich repeat and Ig domain containing 3 [Hom...
LRRC15                0.057   leucine rich repeat containing 15 isoform a 
LRRC15                0.057   leucine rich repeat containing 15 isoform b 
LRRC70                0.055   synleurin 
LRRC4B                0.055   leucine rich repeat containing 4B 
LGR6                  0.054   leucine-rich repeat-containing G protein-coupled rec...
SLIT2                 0.053   slit homolog 2 
LINGO2                0.053   leucine rich repeat and Ig domain containing 2 [Homo...
IGFALS                0.052   insulin-like growth factor binding protein, acid la...
IGFALS                0.052   insulin-like growth factor binding protein, acid labi...
LINGO4                0.052   leucine rich repeat and Ig domain containing 4 [Homo...
ROBO1                 0.052   roundabout 1 isoform b 
ROBO1                 0.052   roundabout 1 isoform a 
HMCN1                 0.051   hemicentin 1 
LRRC4C                0.050   netrin-G1 ligand 
LRRC4                 0.049   leucine rich repeat containing 4 
ROBO1                 0.049   roundabout 1 isoform d 
ROBO1                 0.049   roundabout 1 isoform c 
LOC642132             0.049   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.049   PREDICTED: similar to roundabout 1 isoform 2 
LRRN3                 0.048   leucine rich repeat neuronal 3 
LRRN3                 0.048   leucine rich repeat neuronal 3 
LRRN3                 0.048   leucine rich repeat neuronal 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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