Guide to the Human Genome
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Name: ATP13A5 Sequence: fasta or formatted (1218aa) NCBI GI: 66730421
Description:

ATPase type 13A5

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         68           2
 C cysteine            2.7         33           1
 D aspartate           3.0         37           1
 E glutamate           6.0         73           2
 F phenylalanine       5.3         64           2
 G glycine             6.1         74           2
 H histidine           2.0         24           1
 I isoleucine          6.4         78           3
 K lysine              5.9         72           4
 L leucine            11.3        138           3
 M methionine          2.4         29           1
 N asparagine          3.9         47           1
 P proline             5.0         61           2
 Q glutamine           4.9         60           2
 R arginine            3.7         45           2
 S serine              7.1         86           3
 T threonine           5.8         71           3
 V valine              7.6         93           2
 W tryptophan          1.7         21           1
 Y tyrosine            3.6         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase type 13A5 
ATP13A4               0.566   ATPase type 13A4 
ATP13A3               0.361   ATPase type 13A3 
ATP13A2               0.303   ATPase type 13A2 isoform 1 
ATP13A2               0.302   ATPase type 13A2 isoform 2 
ATP13A2               0.282   ATPase type 13A2 isoform 3 
ATP13A1               0.099   ATPase type 13A1 
ATP12A                0.043   hydrogen/potassium-exchanging ATPase 12A 
ATP1A4                0.040   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP1A2                0.037   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP2A2                0.037   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.037   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2C1                0.036   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.036   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.036   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.036   calcium-transporting ATPase 2C1 isoform 1a 
ATP1A1                0.036   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.036   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A1                0.035   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A3                0.035   Na+/K+ -ATPase alpha 3 subunit 
ATP2C2                0.034   ATPase, Ca++ transporting, type 2C, member 2 
ATP4A                 0.034   hydrogen/potassium-exchanging ATPase 4A 
ATP2A2                0.031   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.027   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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