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Name: ATP2A3 Sequence: fasta or formatted (1029aa) NCBI GI: 28373115
Description:

ATPase, Ca++ transporting, ubiquitous isoform c

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Other entries for this name:
alt prot [999aa] ATPase, Ca++ transporting, ubiquitous isoform a
alt prot [1052aa] ATPase, Ca++ transporting, ubiquitous isoform e
alt prot [1044aa] ATPase, Ca++ transporting, ubiquitous isoform d
alt prot [1043aa] ATPase, Ca++ transporting, ubiquitous isoform b
alt mRNA [1029aa] ATPase, Ca++ transporting, ubiquitous isoform c
alt prot [998aa] ATPase, Ca++ transporting, ubiquitous isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0        103           3
 C cysteine            2.5         26           1
 D aspartate           4.5         46           2
 E glutamate           6.9         71           2
 F phenylalanine       3.5         36           2
 G glycine             6.6         68           2
 H histidine           1.5         15           1
 I isoleucine          5.4         56           1
 K lysine              3.7         38           2
 L leucine            10.4        107           3
 M methionine          2.6         27           1
 N asparagine          2.9         30           1
 P proline             5.2         53           2
 Q glutamine           3.1         32           2
 R arginine            6.0         62           2
 S serine              6.2         64           2
 T threonine           6.6         68           3
 V valine              9.0         93           3
 W tryptophan          1.5         15           2
 Y tyrosine            1.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, Ca++ transporting, ubiquitous isoform c [Hom... 
ATP2A3                1.000   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.998   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A3                0.995   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.995   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.962   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.962   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A2                0.760   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.760   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A1                0.752   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.752   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2A2                0.730   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
LOC100294460          0.440   PREDICTED: similar to ATPase, Ca++ transporting, fa...
ATP2C1                0.228   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.228   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.228   calcium-transporting ATPase 2C1 isoform 1a 
ATP2C1                0.225   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C2                0.205   ATPase, Ca++ transporting, type 2C, member 2 
ATP1A4                0.175   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP1A2                0.175   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A3                0.173   Na+/K+ -ATPase alpha 3 subunit 
ATP4A                 0.173   hydrogen/potassium-exchanging ATPase 4A 
ATP1A1                0.171   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A1                0.171   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A1                0.171   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP12A                0.160   hydrogen/potassium-exchanging ATPase 12A 
ATP2B1                0.137   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.137   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B3                0.137   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.137   plasma membrane calcium ATPase 3 isoform 3a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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