ZMAT1 33654

Name: ZMAT1	Sequence: fasta or formatted (467aa)		NCBI GI: 58533172
Description: zinc finger, matrin type 1 isoform 3		Referenced in: Zinc Finger Proteins
Other entries for this name: alt prot [638aa] zinc finger, matrin type 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.8 13 2 C cysteine 2.4 11 1 D aspartate 5.6 26 1 E glutamate 10.5 49 3 F phenylalanine 3.0 14 1 G glycine 2.8 13 1 H histidine 4.7 22 1 I isoleucine 3.2 15 1 K lysine 10.3 48 4 L leucine 5.6 26 1 M methionine 2.6 12 1 N asparagine 2.8 13 2 P proline 4.5 21 1 Q glutamine 6.4 30 2 R arginine 9.2 43 2 S serine 9.9 46 2 T threonine 4.5 21 1 V valine 4.9 23 2 W tryptophan 0.4 2 1 Y tyrosine 4.1 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, matrin type 1 isoform 3 ZMAT1 1.000 zinc finger, matrin type 1 isoform 1 KRCC1 0.334 lysine-rich coiled-coil 1 NKAP 0.040 NFKB activating protein LOC100133599 0.034 PREDICTED: hypothetical protein LOC100133599 0.034 PREDICTED: hypothetical protein BAZ1A 0.032 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.032 bromodomain adjacent to zinc finger domain, 1A isofo... ANKRD11 0.032 ankyrin repeat domain 11 LOC100131202 0.031 PREDICTED: hypothetical protein LOC100294088 0.031 PREDICTED: hypothetical protein, partial LOC100131202 0.029 PREDICTED: hypothetical protein EIF5B 0.029 eukaryotic translation initiation factor 5B FAM133A 0.029 hypothetical protein LOC286499 SFRS12 0.028 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.028 splicing factor, arginine/serine-rich 12 isoform b [... RBM25 0.027 RNA binding motif protein 25 SFRS12IP1 0.027 P18SRP protein ZC3H13 0.027 zinc finger CCCH-type containing 13 LOC100286959 0.026 PREDICTED: hypothetical protein XP_002343921 PRPF40A 0.026 formin binding protein 3 ANKRD12 0.026 ankyrin repeat domain 12 isoform 2 ANKRD12 0.026 ankyrin repeat domain 12 isoform 1 PRPF38B 0.025 PRP38 pre-mRNA processing factor 38 (yeast) domain ... LOC100288837 0.024 PREDICTED: hypothetical protein XP_002343931, parti... ATRX 0.024 transcriptional regulator ATRX isoform 2 ATRX 0.024 transcriptional regulator ATRX isoform 1 TCOF1 0.024 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.024 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.024 Treacher Collins-Franceschetti syndrome 1 isoform d... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.