Guide to the Human Genome
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Name: LILRA1 Sequence: fasta or formatted (489aa) NCBI GI: 5803066
Description:

leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         30           2
 C cysteine            2.2         11           1
 D aspartate           2.7         13           1
 E glutamate           4.7         23           1
 F phenylalanine       2.9         14           1
 G glycine             8.0         39           2
 H histidine           2.9         14           1
 I isoleucine          4.1         20           1
 K lysine              3.1         15           2
 L leucine            10.8         53           2
 M methionine          0.8          4           1
 N asparagine          2.2         11           1
 P proline             9.2         45           2
 Q glutamine           4.9         24           1
 R arginine            4.7         23           2
 S serine             11.9         58           2
 T threonine           6.1         30           1
 V valine              6.7         33           2
 W tryptophan          2.0         10           1
 Y tyrosine            3.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leukocyte immunoglobulin-like receptor, subfamily A (... 
LILRA2                0.742   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA3                0.741   leukocyte immunoglobulin-like receptor, subfamily A ...
LILRB2                0.727   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB2                0.724   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.715   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.715   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.714   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.714   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA2                0.714   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRA6                0.621   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA4                0.607   leukocyte immunoglobulin-like receptor subfamily A m...
LILRB3                0.570   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.570   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB5                0.507   leukocyte immunoglobulin-like receptor, subfamily B, ...
LILRB5                0.506   leukocyte immunoglobulin-like receptor, subfamily B...
LOC100293904          0.419   PREDICTED: similar to leucocyte immunoglobulin-like...
LILRB5                0.296   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA5                0.240   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.239   leukocyte immunoglobulin-like receptor subfamily A m...
LILRB4                0.209   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.209   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA5                0.209   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.208   leukocyte immunoglobulin-like receptor subfamily A m...
KIR3DL3               0.204   killer cell immunoglobulin-like receptor, three doma...
KIR3DL2               0.196   killer cell immunoglobulin-like receptor, three dom...
KIR3DL1               0.188   killer cell immunoglobulin-like receptor, three dom...
KIR3DS1               0.186   killer cell immunoglobulin-like receptor, three dom...
KIR3DP1               0.179   killer-cell Ig-like receptor 
IGSF1                 0.155   immunoglobulin superfamily, member 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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