BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1 [Homo sapiens] (418 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|56117846 synovial sarcoma translocation, chromosome 18 isofor... 921 0.0 gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 825 0.0 gi|39777614 SS18-like protein 1 [Homo sapiens] 485 e-137 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 112 5e-25 gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 98 2e-20 gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 91 3e-18 gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 88 2e-17 gi|10047104 synovial sarcoma translocation gene on chromosome 18... 83 5e-16 gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 80 3e-15 gi|55750053 atrophin-1 [Homo sapiens] 74 3e-13 gi|55750041 atrophin-1 [Homo sapiens] 74 3e-13 gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 72 7e-13 gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 72 7e-13 gi|119943102 CREB binding protein isoform b [Homo sapiens] 70 5e-12 gi|119943104 CREB binding protein isoform a [Homo sapiens] 70 5e-12 gi|50345997 E1A binding protein p300 [Homo sapiens] 69 6e-12 gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 67 2e-11 gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 67 2e-11 gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 66 7e-11 gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 66 7e-11 gi|151301053 RNA binding motif protein 33 [Homo sapiens] 66 7e-11 gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 65 1e-10 gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 65 1e-10 gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 63 6e-10 gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 63 6e-10 >gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1 [Homo sapiens] Length = 418 Score = 921 bits (2380), Expect = 0.0 Identities = 418/418 (100%), Positives = 418/418 (100%) Query: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 Query: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ 120 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ 120 Query: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT 180 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT Sbjct: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT 180 Query: 181 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ Sbjct: 181 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 Query: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY 300 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY Sbjct: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY 300 Query: 301 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG 360 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG Sbjct: 301 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG 360 Query: 361 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ Sbjct: 361 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 >gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2 [Homo sapiens] Length = 387 Score = 825 bits (2132), Expect = 0.0 Identities = 384/418 (91%), Positives = 384/418 (91%), Gaps = 31/418 (7%) Query: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 Query: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ 120 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ 120 Query: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT 180 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT Sbjct: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT 180 Query: 181 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ Sbjct: 181 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 Query: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY 300 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN Sbjct: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN------------- 287 Query: 301 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG 360 Q YY GNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG Sbjct: 288 ------------------QQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG 329 Query: 361 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ Sbjct: 330 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 387 >gi|39777614 SS18-like protein 1 [Homo sapiens] Length = 396 Score = 485 bits (1248), Expect = e-137 Identities = 251/419 (59%), Positives = 293/419 (69%), Gaps = 24/419 (5%) Query: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 MSVAFA+ R RGKGE+T IQKMLD+N+HLIQCI++ Q+KGKT+EC+QYQQ+LH NLVY Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60 Query: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ 120 LATIADSNQNMQSLLPAPPTQNM +GPG + QSG S SD + G PP+ +Q Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ 120 Query: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT 180 Q+ GP+H+ MQ PN L T+ S++ P GY+H+ P+SQ +P+Q Q T Sbjct: 121 GQIGN---GPSHVSMQQTAPNTLPTTSMSISGP--------GYSHAGPASQGVPMQGQGT 169 Query: 181 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 +GNY R N++MQ N MM QQ + Y+ QGG QHYQGQ + MMGQ +Q Sbjct: 170 ------IGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQS-SIAMMGQGSQ 222 Query: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY 300 G+ MMGQR + PYRP QQG QQY GQE+YYG+QYSH QG E M QQYYPDGH DY Y Sbjct: 223 GSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSH-SQGAAEPMGQQYYPDGHGDYAY 281 Query: 301 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAY-QGPPPQQGYPPQQQQYPGQQGYP 359 QQ SY EQ YDR +E+S+QHYYEGGNSQY QQQ Y QG QQ Y QQQYP QQ YP Sbjct: 282 QQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTY--SQQQYPSQQSYP 339 Query: 360 GQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 GQQQGYG +QG P QYP Y QGQGQQYG YR Q P QQRPYGY+QGQYGNYQQ Sbjct: 340 GQQQGYGSAQGAPS-QYPGYQQGQGQQYGSYRAPQTA-PSAQQQRPYGYEQGQYGNYQQ 396 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 112 bits (281), Expect = 5e-25 Identities = 117/367 (31%), Positives = 134/367 (36%), Gaps = 47/367 (12%) Query: 76 PAPPTQNMPMGP---GGMNQSGPPPPP--------RSHNMPSDGMVGGGPPAPHMQNQMN 124 P+PP + P GP GG GPPPPP + N P G P P Q + Sbjct: 51 PSPPGK--PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKS 108 Query: 125 GQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGS--MGGYNHSVPSSQSMPV------Q 176 P P QGP P N P G GG P P Sbjct: 109 RSPRSPPGKP-QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 167 Query: 177 NQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG 236 N+ S+ P GP P QP QGP PP + P GG QG PP G Sbjct: 168 NKSRSSRSPPGKPQGPPPQGGNQP-QGP---PPPPGKPQGPPPQGGNKPQGPPPPGKPQG 223 Query: 237 QVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHN 296 QG++ + PP +P QGPP Q Q PP+G N+ P G Sbjct: 224 PPPQGDNKSQSARSPPGKP--QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK---PQGPP 278 Query: 297 DYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ----QGYPPQQQQY 352 G Q P+ G S +G Q G Q QGPPP QG PPQ Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP---QGPPPPPGKPQGPPPQGGNK 335 Query: 353 PGQQGYPGQQQGYGPSQGGPGPQY----PNYPQGQGQQYG----GYRPTQPGPPQPPQQR 404 P PG+ QG P QGG + P PQG QQ G G P G PQ PQ Sbjct: 336 PQGPPPPGKPQG-PPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 394 Query: 405 PYGYDQG 411 P G QG Sbjct: 395 PAGQPQG 401 Score = 82.0 bits (201), Expect = 9e-16 Identities = 95/336 (28%), Positives = 114/336 (33%), Gaps = 88/336 (26%) Query: 68 NQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQM 127 N++ S P Q P G Q PPPP G P P Q Q Sbjct: 168 NKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-------------GKPQGPPPQGGNKPQG 214 Query: 128 PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPM 187 P P P QGP P N + S+ + P G+P Sbjct: 215 PPPPGKP-QGPPPQGDNKSQSARSPP------------------------------GKPQ 243 Query: 188 GNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQ 247 GP P QP QGP PP + P GG QG PP G QG Sbjct: 244 ---GPPPQGGNQP-QGP---PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRS 296 Query: 248 RQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPE 307 + PP +P QGPP Q Q QGPP + P P Sbjct: 297 SRSPPGKP--QGPPPQGGNQP-----------QGPPPPPGKPQGP-------------PP 330 Query: 308 QGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGP 367 QG ++P +G Q G + + + PP + PPQQ+ QG P Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQE--------GNNPQGPPP 382 Query: 368 SQGGPGPQYPNYPQGQGQQYGGYRPTQPG-PPQPPQ 402 GG PQ P P GQ G RP Q G P +PPQ Sbjct: 383 PAGG-NPQQPQAPPA-GQPQGPPRPPQGGRPSRPPQ 416 Score = 80.1 bits (196), Expect = 3e-15 Identities = 83/281 (29%), Positives = 100/281 (35%), Gaps = 58/281 (20%) Query: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQG--------- 220 ++ + + ++ G P G N P P Q PP Q N PQG Sbjct: 20 NEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 79 Query: 221 -----GGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQY 275 GG QG PP G QG+ R PP +P QGPP Q Q Sbjct: 80 GPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS-PPGKP--QGPPPQGGNQPQ------ 130 Query: 276 SHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY-----------EG 324 G PP G Q P G N P QG ++ S+ +G Sbjct: 131 ---GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQG 187 Query: 325 GNSQYG--QQQDAYQGPPPQQGYPPQQQQYPGQ---------------QGYPGQQQGYGP 367 GN G QGPPPQ G PQ PG+ + PG+ QG P Sbjct: 188 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQG-PP 246 Query: 368 SQGGPGPQYPNYPQGQGQ---QYGGYRPTQPGPPQPPQQRP 405 QGG PQ P P G+ Q GG +P P PP PQ P Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 287 Score = 45.4 bits (106), Expect = 9e-05 Identities = 39/118 (33%), Positives = 43/118 (36%), Gaps = 14/118 (11%) Query: 292 PDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAY--QGPPPQQGYPPQQ 349 P G G +P P +P Q GGN G QGPPPQ G PQ Sbjct: 36 PQGAPPQGGNKPQGPPSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQG 91 Query: 350 QQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYG 407 PG+ P Q S P P PQG Q G QP P PP +P G Sbjct: 92 PPPPGKPQGPPPQGDKSRSPRSP----PGKPQGPPPQGGN----QPQGPPPPPGKPQG 141 >gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 preproprotein [Homo sapiens] Length = 331 Score = 97.8 bits (242), Expect = 2e-20 Identities = 101/335 (30%), Positives = 120/335 (35%), Gaps = 50/335 (14%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 P+P N P GP PPP+ N P G P P Q + P P Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKP- 97 Query: 136 QGPGPNQLNMTNSSMNMPSSSHGS--MGGYNHSVP----SSQSMPVQNQMTMSQGQPMGN 189 QGP P N P G GG P Q P Q + S P G Sbjct: 98 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGK 157 Query: 190 -YGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQR 248 GP P QP QGP PP + P GG+ QG PP G QG+ Sbjct: 158 PQGPPPQGGNQP-QGP---PPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSS- 212 Query: 249 QIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQ 308 Q PP +P QGPP Q Q QGPP + P P Q Sbjct: 213 QSPPGKP--QGPPPQGGNQP-----------QGPPPPPGKPQGP-------------PPQ 246 Query: 309 GYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPS 368 G ++P +G +Q G + + + PP + PPQQ+ QG P Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG--------NNPQGPPPP 298 Query: 369 QGGPGPQYPNYPQGQGQQYGGYRPTQPG-PPQPPQ 402 GG PQ P P GQ G RP Q G P +PPQ Sbjct: 299 AGG-NPQQPQAPPA-GQPQGPPRPPQGGRPSRPPQ 331 Score = 96.3 bits (238), Expect = 5e-20 Identities = 116/380 (30%), Positives = 132/380 (34%), Gaps = 89/380 (23%) Query: 53 MLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGP---GGMNQSGPPPPPRSHNMPSDGM 109 +L L+ L++ + N+++ P GP GG GPPPPP Sbjct: 5 LLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPP---------- 54 Query: 110 VGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPS 169 G P P Q Q P P P QGP P Sbjct: 55 --GKPQGPPPQGGNKPQGPPPPGKP-QGPPP----------------------------- 82 Query: 170 SQSMPVQNQMTMSQGQPMGN-YGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQ 228 Q + S P G GP P QP QGP PP + P GG QG Sbjct: 83 ------QGDKSRSPRSPPGKPQGPPPQGGNQP-QGP---PPPPGKPQGPPPQGGNRPQGP 132 Query: 229 QPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQ 288 PP G QG+ R PP +P QGPP Q Q G PP G Q Sbjct: 133 PPPGKPQGPPPQGDKSRSPRS-PPGKP--QGPPPQGGNQPQ---------GPPPPPGKPQ 180 Query: 289 QYYPDG-HNDYGYQQPSYPE----QGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ- 342 P G G P P+ QG S +G Q G Q QGPPP Sbjct: 181 GPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQP---QGPPPPP 237 Query: 343 ---QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQY----PNYPQGQGQQYG----GYR 391 QG PPQ P PG+ QG P+QGG Q P PQG QQ G G Sbjct: 238 GKPQGPPPQGGNKPQGPPPPGKPQG-PPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPP 296 Query: 392 PTQPGPPQPPQQRPYGYDQG 411 P G PQ PQ P G QG Sbjct: 297 PPAGGNPQQPQAPPAGQPQG 316 Score = 76.3 bits (186), Expect = 5e-14 Identities = 78/225 (34%), Positives = 88/225 (39%), Gaps = 34/225 (15%) Query: 191 GPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQI 250 GP P +P QGP PP + P GG QG PP G QG+ R Sbjct: 38 GPSPQGGNKP-QGP---PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS- 92 Query: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGY 310 PP +P QGPP Q Q G PP G Q P G N P QG Sbjct: 93 PPGKP--QGPPPQGGNQPQ---------GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQG- 140 Query: 311 DRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQG 370 P D S+ S G+ Q GPPPQ G PQ P PG+ QG P QG Sbjct: 141 PPPQGDKSR----SPRSPPGKPQ----GPPPQGGNQPQGPPPP-----PGKPQG-PPPQG 186 Query: 371 GP---GPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQ 412 G GP P PQG Q R +Q P +P P G +Q Q Sbjct: 187 GKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ 231 Score = 29.6 bits (65), Expect = 5.3 Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 13/73 (17%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMN 124 A QS P P G N GPPPP GG P P Q Sbjct: 265 AQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP-----------AGGNPQQP--QAPPA 311 Query: 125 GQMPGPNHMPMQG 137 GQ GP P G Sbjct: 312 GQPQGPPRPPQGG 324 >gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] Length = 1336 Score = 90.5 bits (223), Expect = 3e-18 Identities = 108/354 (30%), Positives = 129/354 (36%), Gaps = 78/354 (22%) Query: 79 PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGP 138 P+Q MPM M Q GPP P PP P Q QM Q P P H GP Sbjct: 606 PSQQMPMN---MAQMGPPGPQGQFR----------PPGP--QGQMGPQGP-PLHQGGGGP 649 Query: 139 ----GPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQP--MGNYGP 192 GP + P HG G H P P QG P G+ GP Sbjct: 650 QGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGP--------QGPPGPQGSSGP 701 Query: 193 RPNMSMQPNQGPMMH---QQPPSQQYNM-PQG--GGQHYQGQQPPMGMMGQVNQGNHMMG 246 + +M Q GP H Q PP Q ++ PQG G Q QG P GM G Sbjct: 702 QGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQG---------- 751 Query: 247 QRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYP 306 PP+ QG P G + G QGP G+N + Q P+ Sbjct: 752 ----PPHPHGIQGGP----GSQGIQGPV----SQGPLMGLNPRGMQGPPGPRENQGPAPQ 799 Query: 307 EQGYDRPYEDSSQHYYEGGNSQYGQQQ-------DAYQGPPPQQGY--PPQQQQYPGQQG 357 P ++ + GG +G Q+ QGPPPQ PPQ+ + P Sbjct: 800 GMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGP---- 855 Query: 358 YPGQQQGYGPSQGGPGP------QYPNYPQGQGQQYGGYRPTQPGPPQPPQQRP 405 PG Q GP QG GP Q P PQGQ G P+Q P Q+ P Sbjct: 856 -PGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTP 908 Score = 85.1 bits (209), Expect = 1e-16 Identities = 116/415 (27%), Positives = 147/415 (35%), Gaps = 89/415 (21%) Query: 75 LPAPPTQNMPMG----PGGMNQSGP--PPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMP 128 LP P + P G PG GP PP P+ + P M GPP P G P Sbjct: 665 LPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGP-P 723 Query: 129 GPN-HMPMQGPGPNQLNMTNS----SMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQ 183 GP H+ QGP P M M P HG GG P SQ + Q +SQ Sbjct: 724 GPQGHLGPQGP-PGTQGMQGPPGPRGMQGPPHPHGIQGG-----PGSQGI----QGPVSQ 773 Query: 184 GQPMGNY--------GPRPNMSMQPNQGPMMHQQPPSQQYNMPQGG-----GQHYQGQQP 230 G MG GPR N P QG +M P + P GG Q +G Q Sbjct: 774 GPLMGLNPRGMQGPPGPRENQGPAP-QGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQE 832 Query: 231 PMGMMGQVNQGNHMMGQRQI--PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQ 288 GM G QG+ + +++ PP QQGPPQ G G Q G QG Sbjct: 833 IRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARG 892 Query: 289 QYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG----GNSQYGQQQ-----DAYQGP 339 + G + Q+ G P+ Q G Q G Q + QGP Sbjct: 893 PHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGP 952 Query: 340 PPQQGY---PPQQQQYPGQQGYPGQQQG--YGPSQG---------------GPGPQYPN- 378 P +G PP P + Q G +GP +G GP P +P+ Sbjct: 953 GPNKGDSRGPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDD 1012 Query: 379 -------YP-----------QGQG---QQYGGYRPTQPGPPQPPQQRPYGYDQGQ 412 +P +G+G Q +R PGPP PP R + G+ Sbjct: 1013 FSRPDDFHPDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGR 1067 Score = 77.8 bits (190), Expect = 2e-14 Identities = 100/392 (25%), Positives = 142/392 (36%), Gaps = 93/392 (23%) Query: 75 LPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPP----APHMQNQMNG----Q 126 + P +Q MG GPP P + GM+ G PP PH + G + Sbjct: 767 IQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQE 826 Query: 127 MPGPNHM-PMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQ 185 M GP + MQGP P S + P G P SQS QG Sbjct: 827 MRGPQEIRGMQGPPPQ-----GSMLGPPQELRGP--------PGSQS---------QQGP 864 Query: 186 PMGNYGPRPNMSMQPNQGPMMHQQP-----------PSQQYNMPQGG-------GQHYQG 227 P G+ GP P MQ GP Q P P QQ P G Q Q Sbjct: 865 PQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQS 924 Query: 228 QQPPMGMMGQVNQGNHMMGQRQIPPYRPPQ---------QGPPQQYSG------QEDYYG 272 PP + G QG Q +IPP P Q +GPP + G E G Sbjct: 925 TGPPPLIPGLGQQG----AQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGG 980 Query: 273 DQYS------HGGQ---GPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYE 323 ++ GGQ GPP+ + +PD +D+ +P++ + + +E Sbjct: 981 PEHGPERGPFRGGQDCRGPPD--RRGPHPDFPDDFSRPDDFHPDKRFGHRLRE-----FE 1033 Query: 324 GGNSQYGQQQDAYQGPPPQQGYPPQQQQYP------GQQGYPGQQQGYGPSQGGPGPQYP 377 G Q++ +G P +PP +++ +G PG +G P P+ P Sbjct: 1034 GRGGPLPQEEKWRRGGPGPP-FPPDHREFSEGDGRGAARGPPGAWEGRRPGD-ERFPRDP 1091 Query: 378 NYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYD 409 P+ +G++ +R P P + P G D Sbjct: 1092 EDPRFRGRREESFRRGAP-PRHEGRAPPRGRD 1122 Score = 71.6 bits (174), Expect = 1e-12 Identities = 78/247 (31%), Positives = 89/247 (36%), Gaps = 55/247 (22%) Query: 174 PVQNQMTMSQGQPMGNYGPRPNMSMQPNQ------GPMMHQQPPSQQYNMPQGGGQHYQG 227 P Q MSQ P G P P+ M N GP +PP Q M G +QG Sbjct: 587 PFPGQGPMSQ-IPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQG 645 Query: 228 QQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN 287 P G MG P P QGPPQ +D +G P+GM Sbjct: 646 GGGPQGFMG---------------PQGP--QGPPQGLPRPQDMHG----------PQGM- 677 Query: 288 QQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGY-- 345 Q +P H G Q P P QG P G G QGPP QG+ Sbjct: 678 -QRHPGPHGPLGPQGPPGP-QGSSGPQGHMGPQGPPGPQGHIGP-----QGPPGPQGHLG 730 Query: 346 ---PPQQQQYPGQQGYPGQQQGYGPS-----QGGPGPQYPNYPQGQGQQYGGYRPTQPGP 397 PP Q G QG PG + GP QGGPG Q P QG G GP Sbjct: 731 PQGPPGTQ---GMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGP 787 Query: 398 PQPPQQR 404 P P + + Sbjct: 788 PGPRENQ 794 Score = 71.6 bits (174), Expect = 1e-12 Identities = 86/272 (31%), Positives = 101/272 (37%), Gaps = 35/272 (12%) Query: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNM-PQGGGQHYQGQ 228 SQ MP+ N M P G + P QGP +HQ Q M PQG QG Sbjct: 607 SQQMPM-NMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGL 665 Query: 229 QPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGP-----PQQYSGQEDYYGDQYSHGGQGPP 283 P M G H + P PP GP PQ + G + G Q G QGPP Sbjct: 666 PRPQDMHGPQGMQRHPGPHGPLGPQGPP--GPQGSSGPQGHMGPQGPPGPQGHIGPQGPP 723 Query: 284 EGMNQQYYPDG-HNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQG---- 338 G P G G Q P P P+ H +GG G Q QG Sbjct: 724 -GPQGHLGPQGPPGTQGMQGPPGPRGMQGPPH----PHGIQGGPGSQGIQGPVSQGPLMG 778 Query: 339 --PPPQQGYP-PQQQQYPGQQGY-----PGQQQGYGPSQG--GPGPQYPNYPQG-QGQQY 387 P QG P P++ Q P QG P + +G P G G GPQ PQ +G Q Sbjct: 779 LNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQG 838 Query: 388 GGYRPTQPGPPQ-----PPQQRPYGYDQGQYG 414 + + GPPQ P Q G QG G Sbjct: 839 PPPQGSMLGPPQELRGPPGSQSQQGPPQGSLG 870 Score = 40.8 bits (94), Expect = 0.002 Identities = 36/95 (37%), Positives = 39/95 (41%), Gaps = 11/95 (11%) Query: 325 GNSQYGQQQDAYQGPPPQ--QGY--PPQQQQYP---GQQGYPGQQQGYGPSQGGPGPQYP 377 G G Q QGP Q QG+ P QQ P Q G PG Q + P PGPQ Sbjct: 579 GTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRP----PGPQGQ 634 Query: 378 NYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQ 412 PQG GG P PQ PQ P G + Q Sbjct: 635 MGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQ 669 Score = 31.6 bits (70), Expect = 1.4 Identities = 31/86 (36%), Positives = 34/86 (39%), Gaps = 17/86 (19%) Query: 331 QQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPN-YPQGQGQQYGG 389 Q+Q PPP G P G Q +PGQ GP Q P + Q Q Sbjct: 566 QKQVEQIQPPPSSGTP-----LLGPQPFPGQ---------GPMSQIPQGFQQPHPSQQMP 611 Query: 390 YRPTQPGPPQPPQQ-RPYGYDQGQYG 414 Q GPP P Q RP G QGQ G Sbjct: 612 MNMAQMGPPGPQGQFRPPG-PQGQMG 636 >gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo sapiens] Length = 309 Score = 87.8 bits (216), Expect = 2e-17 Identities = 104/343 (30%), Positives = 123/343 (35%), Gaps = 64/343 (18%) Query: 67 SNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQ 126 S + S++ P P G G Q PPPP + P G NQ G Sbjct: 24 SQEESPSVISGKPEGRRPQG-GNQPQRTPPPPGKPEGRPPQG-----------GNQSQGP 71 Query: 127 MPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGS--MGGYNHSVPSSQSMPVQNQMTMSQG 184 P P +GP P N + P G GG P + G Sbjct: 72 PPRPGKP--EGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRP-----------G 118 Query: 185 QPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMM-GQVNQGNH 243 +P G N S P P + PP PQGG Q QG P G G QG + Sbjct: 119 KPEGPPPQGGNQSQGPPPRPGKPEGPP------PQGGNQS-QGPPPRPGKPEGPPPQGGN 171 Query: 244 MMGQRQIPPYRPPQ-QGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQ 302 Q Q PP P + +GPP Q Q QGPP + P+G G Q Sbjct: 172 ---QSQGPPPHPGKPEGPPPQGGNQS-----------QGPPPRPGK---PEGPPPQGGNQ 214 Query: 303 PSYPEQGYDRPYEDSSQHYYEGGNSQYGQ--QQDAYQGPPPQQGYPPQQQQYPGQ-QGYP 359 P +P SQ GGN G QGPPPQ+G PQ+ PG+ QG P Sbjct: 215 SQGPPPRPGKPEGPPSQ----GGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP 270 Query: 360 GQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQ 402 G P Q P P PQG G RP +P QPPQ Sbjct: 271 --PPGGNPQQ--PLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309 Score = 79.0 bits (193), Expect = 8e-15 Identities = 83/240 (34%), Positives = 99/240 (41%), Gaps = 42/240 (17%) Query: 184 GQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMM-GQVNQGN 242 G+P G N S P P + PP PQGG Q QG P G GQ QG Sbjct: 55 GKPEGRPPQGGNQSQGPPPRPGKPEGPP------PQGGNQS-QGPPPRPGKPEGQPPQGG 107 Query: 243 HMMGQRQIPPYRPPQ-QGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQY-------YPDG 294 + Q Q PP RP + +GPP Q Q + PP+G NQ P+G Sbjct: 108 N---QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 164 Query: 295 HNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ----QGYPPQQ- 349 G Q P +P EG Q G Q QGPPP+ +G PPQ Sbjct: 165 PPPQGGNQSQGPPPHPGKP---------EGPPPQGGNQS---QGPPPRPGKPEGPPPQGG 212 Query: 350 QQYPGQQGYPGQQQGYGPSQGGPGPQ----YPNYPQGQGQQYGGYRPTQPGPPQPPQQRP 405 Q G PG+ +G PSQGG PQ +P PQG Q G +P +P PP PQ P Sbjct: 213 NQSQGPPPRPGKPEG-PPSQGGNKPQGPPPHPGKPQGPPPQEGN-KPQRPPPPGRPQGPP 270 Score = 69.7 bits (169), Expect = 5e-12 Identities = 78/255 (30%), Positives = 101/255 (39%), Gaps = 49/255 (19%) Query: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 229 ++ + + ++ G+P G RP QP + P PP + P GG QG Sbjct: 20 NEDVSQEESPSVISGKPEGR---RPQGGNQPQRTP----PPPGKPEGRPPQGGNQSQGPP 72 Query: 230 PPMGMM-GQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQ 288 P G G QG + Q Q PP RP G P+ GQ G+Q QGPP + Sbjct: 73 PRPGKPEGPPPQGGN---QSQGPPPRP---GKPE---GQPPQGGNQ----SQGPPPRPGK 119 Query: 289 QYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ----QG 344 P+G G Q P +P EG Q G Q QGPPP+ +G Sbjct: 120 ---PEGPPPQGGNQSQGPPPRPGKP---------EGPPPQGGNQS---QGPPPRPGKPEG 164 Query: 345 YPPQQ-QQYPGQQGYPGQQQGYGPSQGG-------PGPQYPNYPQGQGQQYGGYRPTQPG 396 PPQ Q G +PG+ +G P QGG P P P P QG P +PG Sbjct: 165 PPPQGGNQSQGPPPHPGKPEG-PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 223 Query: 397 PPQPPQQRPYGYDQG 411 P+ P + QG Sbjct: 224 KPEGPPSQGGNKPQG 238 >gi|10047104 synovial sarcoma translocation gene on chromosome 18-like 2 [Homo sapiens] Length = 77 Score = 82.8 bits (203), Expect = 5e-16 Identities = 38/73 (52%), Positives = 53/73 (72%) Query: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60 MSVAF RGK E+ IQ++L++N+ LI+CI++ QNKG+ +EC QYQ +LH NL+Y Sbjct: 1 MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60 Query: 61 LATIADSNQNMQS 73 LATIAD++ S Sbjct: 61 LATIADASPTSTS 73 >gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo sapiens] Length = 247 Score = 80.1 bits (196), Expect = 3e-15 Identities = 84/260 (32%), Positives = 108/260 (41%), Gaps = 51/260 (19%) Query: 169 SSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQ 228 SS+ + + + + G+P G RP QP + P PP + P GG QG Sbjct: 19 SSEDVSQEESLFLISGKPEGR---RPQGGNQPQRPP----PPPGKPQGPPPQGGNQSQGP 71 Query: 229 QPPMGMM-GQVNQGNHMMGQRQIPPYRP--PQQGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 PP G G+ QG + Q Q PP P P++ PPQ G+Q G PP G Sbjct: 72 PPPPGKPEGRPPQGGN---QSQGPPPHPGKPERPPPQG--------GNQSQ--GTPPPPG 118 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQ--QQDAYQGPPPQQ 343 ++ P G N +P P +RP +GGN G +GPPPQ+ Sbjct: 119 KPERPPPQGGNQS--HRPPPPPGKPERPPP-------QGGNQSQGPPPHPGKPEGPPPQE 169 Query: 344 GYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYP-QGQGQQYGGYRPTQP------- 395 G + + P PG+ QG P Q G PQ P P + QG G P QP Sbjct: 170 GNKSRSARSP-----PGKPQG-PPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGK 223 Query: 396 --GPPQPPQ-QRPYGYDQGQ 412 GPP PPQ RP QGQ Sbjct: 224 PQGPPPPPQGGRPPRPAQGQ 243 Score = 64.7 bits (156), Expect = 1e-10 Identities = 65/206 (31%), Positives = 73/206 (35%), Gaps = 27/206 (13%) Query: 78 PPTQNMPMGP---GGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG-PNHM 133 PP P GP GG GPPPPP G G PP Q+Q PG P Sbjct: 51 PPPPGKPQGPPPQGGNQSQGPPPPP--------GKPEGRPPQGGNQSQGPPPHPGKPERP 102 Query: 134 PMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQ------NQMTMSQGQPM 187 P Q G NQ T P G +H P P + NQ P Sbjct: 103 PPQ--GGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPG 160 Query: 188 GNYGPRP---NMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHM 244 GP P N S P Q PP Q+ N PQG + Q PP Sbjct: 161 KPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPP 220 Query: 245 MGQRQIPPYRPPQQG--PPQQYSGQE 268 G+ Q PP PP QG PP+ GQ+ Sbjct: 221 AGKPQGPP--PPPQGGRPPRPAQGQQ 244 Score = 50.8 bits (120), Expect = 2e-06 Identities = 46/168 (27%), Positives = 56/168 (33%), Gaps = 32/168 (19%) Query: 70 NMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG 129 N P PP + P G NQS PPPP G P P Q Q P Sbjct: 108 NQSQGTPPPPGKPERPPPQGGNQSHRPPPPP-----------GKPERPPPQGGNQSQGPP 156 Query: 130 PNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGN 189 P+ +GP P + N + S+ + P G P Q + QG P Sbjct: 157 PHPGKPEGPPPQEGNKSRSARSPPGKPQG---------------PPQQEGNKPQGPPP-- 199 Query: 190 YGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQ 237 P P QQP + PQG QG +PP GQ Sbjct: 200 ----PGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQ 243 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 73.6 bits (179), Expect = 3e-13 Identities = 96/387 (24%), Positives = 124/387 (32%), Gaps = 62/387 (16%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPP---PRSHNMPSDGMVGGGP-----PAPHMQNQ-M 123 +L APP N P + + PPPP P ++ S +G P P+PH Q M Sbjct: 284 NLPSAPPPANFPH----VTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGM 339 Query: 124 NGQMPGPNHMPMQGPGPNQLNMTNSSMNMP----------------SSSHGSMGGYNHSV 167 G PGP P P P+ L +SS P SSS S Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF 399 Query: 168 PSSQSMP-VQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQ 226 P+SQ++P + + N P+ P+Q PP Y + Sbjct: 400 PASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHP 459 Query: 227 GQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQG-PPEG 285 G PP G + + + + QQ QQ Q+ Q HG G PP G Sbjct: 460 GPFPP--STGAQSTAHPPVSTH----HHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPG 513 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGY 345 G + + + P G RPY H +SQ Q GPP Sbjct: 514 AFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAH-LPPPHSQVSYSQAGPNGPPVSSS- 571 Query: 346 PPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYP---------------QGQGQQYGGY 390 Q YP PSQG G YP P GY Sbjct: 572 -SNSSSSTSQGSYPCSHP--SPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGY 628 Query: 391 RPTQPGPPQPPQQRPYGYDQGQYGNYQ 417 + PP PP PYG G Y+ Sbjct: 629 KTA--SPPGPP---PYGKRAPSPGAYK 650 Score = 55.8 bits (133), Expect = 7e-08 Identities = 86/368 (23%), Positives = 115/368 (31%), Gaps = 53/368 (14%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSD-GMVGGG----PPAPHMQNQMNGQMPGP 130 P P Q P G GG+ SGPP P+ S G GG PP + +G P Sbjct: 213 PPPHPQLYPGGTGGV-LSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAP 271 Query: 131 NHMPMQGP--------GPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTM 181 P P P N + + N+ P + + + S P + P+ + Sbjct: 272 PTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPS 331 Query: 182 --SQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQ------YNMPQGGGQHYQGQQPPMG 233 + GQ MG P P P P H PP+ P Sbjct: 332 PHAMGQGMGGLPPGPEKG--PTLAPSPHSLPPASSSAPAPPMRFPYSSSSS-SSAAASSS 388 Query: 234 MMGQVNQGNHMMGQRQIPPYRPPQQGPPQ---QYSGQEDYYGDQ-------YSHGGQGPP 283 + + + +P Y P PP S Q Y +S G PP Sbjct: 389 SSSSSSSASPFPASQALPSY--PHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPP 446 Query: 284 EGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQ 343 + H G PS Q P + H+++ Q QQQ Q Sbjct: 447 PYGRLLANSNAHP--GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ------ 498 Query: 344 GYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQ-PPQ 402 QQQQ+ G G P P +G G + +P G RP PGP PP Sbjct: 499 ----QQQQHHGNSGPPPPGAFPHPLEG--GSSHHAHPYAMSPSLGSLRPYPPGPAHLPPP 552 Query: 403 QRPYGYDQ 410 Y Q Sbjct: 553 HSQVSYSQ 560 Score = 31.2 bits (69), Expect = 1.8 Identities = 51/203 (25%), Positives = 63/203 (31%), Gaps = 55/203 (27%) Query: 218 PQGGGQHYQGQQPPMGMMGQV-NQGNHMMGQRQIP--PYRPPQQGPPQQYSGQEDYYGDQ 274 P+ Q + P + G V N + G Q P PY PP PP Sbjct: 121 PRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQ---------- 170 Query: 275 YSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQD 334 PP+ +Q P+ + PS GY P E + + Sbjct: 171 -------PPDSTPRQ--PEASFE---PHPSVTPTGYHAPMEPPTSRMF------------ 206 Query: 335 AYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQ 394 Q PP PP Q YPG G GP GG P G G+Q+ PT Sbjct: 207 --QAPPGAP--PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGG-PNG-GKQHP--PPTT 258 Query: 395 P----------GPPQPPQQRPYG 407 P PP P P G Sbjct: 259 PISVSSSGASGAPPTKPPTTPVG 281 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 73.6 bits (179), Expect = 3e-13 Identities = 96/387 (24%), Positives = 124/387 (32%), Gaps = 62/387 (16%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPP---PRSHNMPSDGMVGGGP-----PAPHMQNQ-M 123 +L APP N P + + PPPP P ++ S +G P P+PH Q M Sbjct: 284 NLPSAPPPANFPH----VTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGM 339 Query: 124 NGQMPGPNHMPMQGPGPNQLNMTNSSMNMP----------------SSSHGSMGGYNHSV 167 G PGP P P P+ L +SS P SSS S Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF 399 Query: 168 PSSQSMP-VQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQ 226 P+SQ++P + + N P+ P+Q PP Y + Sbjct: 400 PASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHP 459 Query: 227 GQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQG-PPEG 285 G PP G + + + + QQ QQ Q+ Q HG G PP G Sbjct: 460 GPFPP--STGAQSTAHPPVSTH----HHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPG 513 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGY 345 G + + + P G RPY H +SQ Q GPP Sbjct: 514 AFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAH-LPPPHSQVSYSQAGPNGPPVSSS- 571 Query: 346 PPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYP---------------QGQGQQYGGY 390 Q YP PSQG G YP P GY Sbjct: 572 -SNSSSSTSQGSYPCSHP--SPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGY 628 Query: 391 RPTQPGPPQPPQQRPYGYDQGQYGNYQ 417 + PP PP PYG G Y+ Sbjct: 629 KTA--SPPGPP---PYGKRAPSPGAYK 650 Score = 55.8 bits (133), Expect = 7e-08 Identities = 86/368 (23%), Positives = 115/368 (31%), Gaps = 53/368 (14%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSD-GMVGGG----PPAPHMQNQMNGQMPGP 130 P P Q P G GG+ SGPP P+ S G GG PP + +G P Sbjct: 213 PPPHPQLYPGGTGGV-LSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAP 271 Query: 131 NHMPMQGP--------GPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTM 181 P P P N + + N+ P + + + S P + P+ + Sbjct: 272 PTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPS 331 Query: 182 --SQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQ------YNMPQGGGQHYQGQQPPMG 233 + GQ MG P P P P H PP+ P Sbjct: 332 PHAMGQGMGGLPPGPEKG--PTLAPSPHSLPPASSSAPAPPMRFPYSSSSS-SSAAASSS 388 Query: 234 MMGQVNQGNHMMGQRQIPPYRPPQQGPPQ---QYSGQEDYYGDQ-------YSHGGQGPP 283 + + + +P Y P PP S Q Y +S G PP Sbjct: 389 SSSSSSSASPFPASQALPSY--PHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPP 446 Query: 284 EGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQ 343 + H G PS Q P + H+++ Q QQQ Q Sbjct: 447 PYGRLLANSNAHP--GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ------ 498 Query: 344 GYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQ-PPQ 402 QQQQ+ G G P P +G G + +P G RP PGP PP Sbjct: 499 ----QQQQHHGNSGPPPPGAFPHPLEG--GSSHHAHPYAMSPSLGSLRPYPPGPAHLPPP 552 Query: 403 QRPYGYDQ 410 Y Q Sbjct: 553 HSQVSYSQ 560 Score = 31.2 bits (69), Expect = 1.8 Identities = 51/203 (25%), Positives = 63/203 (31%), Gaps = 55/203 (27%) Query: 218 PQGGGQHYQGQQPPMGMMGQV-NQGNHMMGQRQIP--PYRPPQQGPPQQYSGQEDYYGDQ 274 P+ Q + P + G V N + G Q P PY PP PP Sbjct: 121 PRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQ---------- 170 Query: 275 YSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQD 334 PP+ +Q P+ + PS GY P E + + Sbjct: 171 -------PPDSTPRQ--PEASFE---PHPSVTPTGYHAPMEPPTSRMF------------ 206 Query: 335 AYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQ 394 Q PP PP Q YPG G GP GG P G G+Q+ PT Sbjct: 207 --QAPPGAP--PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGG-PNG-GKQHP--PPTT 258 Query: 395 P----------GPPQPPQQRPYG 407 P PP P P G Sbjct: 259 PISVSSSGASGAPPTKPPTTPVG 281 >gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] Length = 2285 Score = 72.4 bits (176), Expect = 7e-13 Identities = 103/399 (25%), Positives = 125/399 (31%), Gaps = 73/399 (18%) Query: 86 GPGGMNQ-SGPPPPPRSHNMPSD-------GMVGGGPPAP-HMQNQMNGQMPGPNHMPMQ 136 G GG+ +GP H P+ PPAP + + G PG Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247 Query: 137 GPGP---NQLNMTNSSMNMPSSSHGSMGGYNHSV-----PSSQSMPVQNQMTMS------ 182 G P + + ++SS + G+MGG S P + P NQ+ S Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307 Query: 183 -QGQPMGNYGPRPNMSMQPNQGPMMHQQ----PPSQQYNMPQGGGQHYQGQQPPMGMMGQ 237 QG P G+Y P M Q + GG + PM G Sbjct: 308 YQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSP-GS 366 Query: 238 VNQGNHMMGQRQIPPYRPPQQGP--PQQYSGQEDYY-------GDQYSHGGQGPPEG-MN 287 G + + P Q G PQ Y G Y G Q HG G P G Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQT 426 Query: 288 QQYYPD----------GHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQ 337 Q YP G Y Q P Y +QG + YY + QQQ Y Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486 Query: 338 GPPPQQ------GYPPQQQQYPGQ----QGYPGQQQGYGPSQGGPGP------------- 374 PP Q Y Q Q P Q Q QQ P Q P P Sbjct: 487 QQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQ 546 Query: 375 QYPNYPQGQGQQ-YGGYRPTQPGPPQPPQQRPYGYDQGQ 412 P Y Q Q Q Y +P QP P QQ Y Q Q Sbjct: 547 SQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQ 585 Score = 67.8 bits (164), Expect = 2e-11 Identities = 97/365 (26%), Positives = 116/365 (31%), Gaps = 78/365 (21%) Query: 71 MQSLLPAPPTQNMPMG-PGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG 129 + LL +P + G PGG GP DG G GP M +Q G Sbjct: 295 LNQLLTSPSSARGYQGYPGGDYSGGP----------QDGGAGKGPA--DMASQCWGAAAA 342 Query: 130 PNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGN 189 G Q S + P S S GG + Q +QM + QP G Sbjct: 343 AAAAAAASGGAQQ-----RSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGG 397 Query: 190 YGPRPNMSMQPNQGPMMHQQPPSQQYNMP---------QG------GGQHYQGQQPPMGM 234 P + P GP P Q Y QG GG Y Q PP G Sbjct: 398 TNPY-SQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQ 456 Query: 235 MGQVNQGNHMMG----------QRQIPPY--RPPQQGPPQQYSGQEDYYGDQYSHGGQGP 282 G G Q+Q PPY +PP Q P Q S Q+ P Sbjct: 457 QGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ--------P 508 Query: 283 PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ 342 P+ + QP Y +Q P++ S Y QQ Q P Q Sbjct: 509 PQLQS-------------SQPPYSQQPSQPPHQQSPAPY-------PSQQSTTQQHPQSQ 548 Query: 343 QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQ 402 Y Q Q P QQ P Q SQ PQ PQ Q Q Y + PPQ Sbjct: 549 PPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ----PQSQQSQQTAYSQQRFPPPQELS 604 Query: 403 QRPYG 407 Q +G Sbjct: 605 QDSFG 609 Score = 62.0 bits (149), Expect = 1e-09 Identities = 84/334 (25%), Positives = 120/334 (35%), Gaps = 47/334 (14%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMN 124 A S + Q+ P P +Q +Q PPP + D AP M + Sbjct: 569 APSTLSQQAAYPQPQSQQSQQT--AYSQQRFPPP---QELSQDSFGSQASSAPSMTSSKG 623 Query: 125 GQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMG-GYNHSVPSS----QSMPVQNQM 179 GQ ++ +Q + +++ S ++P + G++ G + S SS QS P Q+ Sbjct: 624 GQED--MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF 681 Query: 180 TMSQGQPM-GNYGPRPNMSMQP------NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPM 232 + + G GP P+ P GP+ P Q GQ P M Sbjct: 682 SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSM 741 Query: 233 GMMGQVNQGNHMMGQRQIPPYRPPQQG---PPQQYSGQEDYYG----DQYSHGGQGPPEG 285 +M Q+P Y PQ G P+Q SG + + G Q S G GP G Sbjct: 742 NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGG 801 Query: 286 MNQQYYPDGHNDYGY-QQPSY---PEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPP 341 QY P G GY +QP+Y P Y + G +GQ G PP Sbjct: 802 ---QYGPQG----GYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ-----PGIPP 849 Query: 342 QQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQ 375 PP + + P YGP+ PQ Sbjct: 850 YGTLPPGRMSHASMGNRP-----YGPNMANMPPQ 878 Score = 59.3 bits (142), Expect = 6e-09 Identities = 100/370 (27%), Positives = 127/370 (34%), Gaps = 76/370 (20%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGG---PPAPHMQN 121 ADS ++ + P P G G M GP P + S M GG PP P + Sbjct: 1121 ADSKKSQPKIQPPSPA-----GSGSMQ--GPQTPQST----SSSMAEGGDLKPPTP--AS 1167 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTM 181 + Q+P P+ PG ++ N S + N P+ P N M Sbjct: 1168 TPHSQIP-----PL--PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDM 1220 Query: 182 SQGQPMGNYGPRPNMSMQPNQGPM--MHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN 239 MG MS +PN+ P M + P S + M G G + G P Sbjct: 1221 -----MGR------MSYEPNKDPYGSMRKAPGSDPF-MSSGQGPN-GGMGDPYSRAAGPG 1267 Query: 240 QGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYG 299 GN MG RQ PY P Y + G GP +G+ G Sbjct: 1268 LGNVAMGPRQHYPYGGP--------------YDRVRTEPGIGP----------EGNMSTG 1303 Query: 300 YQQP----SYPEQGYDRP--YEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQ--QQ 351 QP S P+ G P Y Q + + YG Q QG P +P QQ Sbjct: 1304 APQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFST-QGTPSGSPFPSQQTTMY 1362 Query: 352 YPGQQGYPGQQQG-YGP-SQGGPGPQYP-NYPQGQGQQYGGYRPTQPGPPQPPQQRPYGY 408 QQ Y G YGP ++ G Y Y GQGQ P P PQP Q+ Sbjct: 1363 QQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP--PAQPQPASQQQAAQ 1420 Query: 409 DQGQYGNYQQ 418 Q Y Q Sbjct: 1421 PSPQQDVYNQ 1430 Score = 55.5 bits (132), Expect = 9e-08 Identities = 115/448 (25%), Positives = 141/448 (31%), Gaps = 123/448 (27%) Query: 80 TQNMPMGPGGMNQSGPP----PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 + + PM PG G P P P S P D M G P P+ Q GP P Sbjct: 357 SHHAPMSPGSSGGGGQPLARTPQPSS---PMDQM-GKMRPQPYGGTNPYSQQQGPPSGPQ 412 Query: 136 QGPG-PNQLNMTNSSMNMPSSSHG----SMGG--------------------------YN 164 QG G P Q + + P + G +MGG YN Sbjct: 413 QGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYN 472 Query: 165 HSVPS-SQSMPVQNQMTMSQ-------------GQPMGNYGPRPNMSMQPNQGPMMHQQP 210 P Q P +Q SQ QP +P S QP+Q P HQQ Sbjct: 473 QQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPP--HQQS 530 Query: 211 P----SQQ------------YNMPQGGGQHYQGQQP----PMGMMGQVNQGNHMMGQRQI 250 P SQQ Y+ PQ YQ QQP P + Q Q Q Sbjct: 531 PAPYPSQQSTTQQHPQSQPPYSQPQAQSP-YQQQQPQQPAPSTLSQQAAYPQPQSQQSQQ 589 Query: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHG-----GQGPPEGMNQ--QYYPDGHNDYGYQQP 303 Y + PPQ+ S +D +G Q S +G E MN Q P D Sbjct: 590 TAYSQQRFPPPQELS--QDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSID 647 Query: 304 SYP--EQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGP----------------PPQQGY 345 P +G P +S G +S G+Q + Q P P G Sbjct: 648 DLPMGTEGALSPGVSTS-----GISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGS 702 Query: 346 PPQQQQ----------YPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQ-----QYGGY 390 P Q PG Q P G S P + Q +G Q Y Sbjct: 703 PASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQY 762 Query: 391 RPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 QPG P+Q G G+YQQ Sbjct: 763 SSPQPGSALSPRQPSGGQIHTGMGSYQQ 790 Score = 49.3 bits (116), Expect = 6e-06 Identities = 94/373 (25%), Positives = 111/373 (29%), Gaps = 62/373 (16%) Query: 78 PPTQNMPMGPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PP P P P P +S P P A Q Q P P+ + Sbjct: 516 PPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 575 Query: 136 QGPGPNQLNMTN-----SSMNMPSS---SHGSMGGYNHSVPS-SQSMPVQNQMTMS---- 182 Q P + + S P S S G S PS + S Q M +S Sbjct: 576 QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSR 635 Query: 183 -----------QGQPMGNYGP-RPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQ--HYQGQ 228 PMG G P +S Q P+Q P +G Sbjct: 636 PSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGP 695 Query: 229 QP-PMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN 287 P P+G V Q P P Q PP+ SGQ D H MN Sbjct: 696 SPSPVGSPASVAQSR---SGPLSPAAVPGNQMPPRPPSGQSD----SIMH------PSMN 742 Query: 288 QQYYPDGHNDYGYQQ--PSYPEQGYDRPYEDSSQHYYEGGNSQYGQ---QQDAYQGPPPQ 342 Q D GY Q P P+ +P S GG G QQ++ PQ Sbjct: 743 QSSIAQ---DRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQ 799 Query: 343 QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQ 402 G Q YP Q Y PS G G P G G Q G P PP Sbjct: 800 GGQYGPQGGYPRQPNYNALPNANYPSAGMAG---GINPMGAGGQMHGQPGIPPYGTLPPG 856 Query: 403 Q--------RPYG 407 + RPYG Sbjct: 857 RMSHASMGNRPYG 869 Score = 39.3 bits (90), Expect = 0.007 Identities = 41/150 (27%), Positives = 52/150 (34%), Gaps = 25/150 (16%) Query: 79 PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGP 138 P P G S PP NMP M GGP + G M QG Sbjct: 1451 PQNQFPFQFGRDRVSAPPGTNAQQNMPPQMM--GGPIQASAEVAQQGTM-------WQGR 1501 Query: 139 GPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQ---------PMGN 189 +MT + N S+ G H V + M +Q +G P G Sbjct: 1502 N----DMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGP 1557 Query: 190 YGPRPNMSMQPNQGPMMHQQPPSQQYNMPQ 219 P P M+ P P +Q PPS Q ++PQ Sbjct: 1558 SAPVPPMTRPP---PSNYQPPPSMQNHIPQ 1584 Score = 31.2 bits (69), Expect = 1.8 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 25/136 (18%) Query: 52 QMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVG 111 +MLHT D N + P+ T+ P GP PPP ++ Sbjct: 1531 EMLHT---------DQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQ-------- 1573 Query: 112 GGPPAPHMQNQM-NGQMPGPNHMPMQG-PGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPS 169 P P MQN + P P PM+ P++ +S M M + G +H P+ Sbjct: 1574 ---PPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKA--GPPVPASHIAPA 1628 Query: 170 SQSMP-VQNQMTMSQG 184 P ++ +T G Sbjct: 1629 PVQPPMIRRDITFPPG 1644 Score = 30.8 bits (68), Expect = 2.4 Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 19/95 (20%) Query: 75 LPAPPTQNMPMGPGGMNQSGPPP--------------PPRSHNMPSDGMVGGGPPAPHMQ 120 +P M PGGMN+ PP NM GM+G GPP Sbjct: 875 MPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGI 934 Query: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSS 155 N M G M P P G M N+S M +S Sbjct: 935 NSMAG-MINPQGPPYSMGG----TMANNSAGMAAS 964 >gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] Length = 2068 Score = 72.4 bits (176), Expect = 7e-13 Identities = 103/399 (25%), Positives = 125/399 (31%), Gaps = 73/399 (18%) Query: 86 GPGGMNQ-SGPPPPPRSHNMPSD-------GMVGGGPPAP-HMQNQMNGQMPGPNHMPMQ 136 G GG+ +GP H P+ PPAP + + G PG Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247 Query: 137 GPGP---NQLNMTNSSMNMPSSSHGSMGGYNHSV-----PSSQSMPVQNQMTMS------ 182 G P + + ++SS + G+MGG S P + P NQ+ S Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307 Query: 183 -QGQPMGNYGPRPNMSMQPNQGPMMHQQ----PPSQQYNMPQGGGQHYQGQQPPMGMMGQ 237 QG P G+Y P M Q + GG + PM G Sbjct: 308 YQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSP-GS 366 Query: 238 VNQGNHMMGQRQIPPYRPPQQGP--PQQYSGQEDYY-------GDQYSHGGQGPPEG-MN 287 G + + P Q G PQ Y G Y G Q HG G P G Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQT 426 Query: 288 QQYYPD----------GHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQ 337 Q YP G Y Q P Y +QG + YY + QQQ Y Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486 Query: 338 GPPPQQ------GYPPQQQQYPGQ----QGYPGQQQGYGPSQGGPGP------------- 374 PP Q Y Q Q P Q Q QQ P Q P P Sbjct: 487 QQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQ 546 Query: 375 QYPNYPQGQGQQ-YGGYRPTQPGPPQPPQQRPYGYDQGQ 412 P Y Q Q Q Y +P QP P QQ Y Q Q Sbjct: 547 SQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQ 585 Score = 67.8 bits (164), Expect = 2e-11 Identities = 97/365 (26%), Positives = 116/365 (31%), Gaps = 78/365 (21%) Query: 71 MQSLLPAPPTQNMPMG-PGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG 129 + LL +P + G PGG GP DG G GP M +Q G Sbjct: 295 LNQLLTSPSSARGYQGYPGGDYSGGP----------QDGGAGKGPA--DMASQCWGAAAA 342 Query: 130 PNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGN 189 G Q S + P S S GG + Q +QM + QP G Sbjct: 343 AAAAAAASGGAQQ-----RSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGG 397 Query: 190 YGPRPNMSMQPNQGPMMHQQPPSQQYNMP---------QG------GGQHYQGQQPPMGM 234 P + P GP P Q Y QG GG Y Q PP G Sbjct: 398 TNPY-SQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQ 456 Query: 235 MGQVNQGNHMMG----------QRQIPPY--RPPQQGPPQQYSGQEDYYGDQYSHGGQGP 282 G G Q+Q PPY +PP Q P Q S Q+ P Sbjct: 457 QGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ--------P 508 Query: 283 PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQ 342 P+ + QP Y +Q P++ S Y QQ Q P Q Sbjct: 509 PQLQS-------------SQPPYSQQPSQPPHQQSPAPY-------PSQQSTTQQHPQSQ 548 Query: 343 QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQ 402 Y Q Q P QQ P Q SQ PQ PQ Q Q Y + PPQ Sbjct: 549 PPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQ----PQSQQSQQTAYSQQRFPPPQELS 604 Query: 403 QRPYG 407 Q +G Sbjct: 605 QDSFG 609 Score = 62.0 bits (149), Expect = 1e-09 Identities = 84/334 (25%), Positives = 120/334 (35%), Gaps = 47/334 (14%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMN 124 A S + Q+ P P +Q +Q PPP + D AP M + Sbjct: 569 APSTLSQQAAYPQPQSQQSQQT--AYSQQRFPPP---QELSQDSFGSQASSAPSMTSSKG 623 Query: 125 GQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMG-GYNHSVPSS----QSMPVQNQM 179 GQ ++ +Q + +++ S ++P + G++ G + S SS QS P Q+ Sbjct: 624 GQED--MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF 681 Query: 180 TMSQGQPM-GNYGPRPNMSMQP------NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPM 232 + + G GP P+ P GP+ P Q GQ P M Sbjct: 682 SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSM 741 Query: 233 GMMGQVNQGNHMMGQRQIPPYRPPQQG---PPQQYSGQEDYYG----DQYSHGGQGPPEG 285 +M Q+P Y PQ G P+Q SG + + G Q S G GP G Sbjct: 742 NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGG 801 Query: 286 MNQQYYPDGHNDYGY-QQPSY---PEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPP 341 QY P G GY +QP+Y P Y + G +GQ G PP Sbjct: 802 ---QYGPQG----GYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ-----PGIPP 849 Query: 342 QQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQ 375 PP + + P YGP+ PQ Sbjct: 850 YGTLPPGRMSHASMGNRP-----YGPNMANMPPQ 878 Score = 55.5 bits (132), Expect = 9e-08 Identities = 115/448 (25%), Positives = 141/448 (31%), Gaps = 123/448 (27%) Query: 80 TQNMPMGPGGMNQSGPP----PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 + + PM PG G P P P S P D M G P P+ Q GP P Sbjct: 357 SHHAPMSPGSSGGGGQPLARTPQPSS---PMDQM-GKMRPQPYGGTNPYSQQQGPPSGPQ 412 Query: 136 QGPG-PNQLNMTNSSMNMPSSSHG----SMGG--------------------------YN 164 QG G P Q + + P + G +MGG YN Sbjct: 413 QGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYN 472 Query: 165 HSVPS-SQSMPVQNQMTMSQ-------------GQPMGNYGPRPNMSMQPNQGPMMHQQP 210 P Q P +Q SQ QP +P S QP+Q P HQQ Sbjct: 473 QQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPP--HQQS 530 Query: 211 P----SQQ------------YNMPQGGGQHYQGQQP----PMGMMGQVNQGNHMMGQRQI 250 P SQQ Y+ PQ YQ QQP P + Q Q Q Sbjct: 531 PAPYPSQQSTTQQHPQSQPPYSQPQAQSP-YQQQQPQQPAPSTLSQQAAYPQPQSQQSQQ 589 Query: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHG-----GQGPPEGMNQ--QYYPDGHNDYGYQQP 303 Y + PPQ+ S +D +G Q S +G E MN Q P D Sbjct: 590 TAYSQQRFPPPQELS--QDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSID 647 Query: 304 SYP--EQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGP----------------PPQQGY 345 P +G P +S G +S G+Q + Q P P G Sbjct: 648 DLPMGTEGALSPGVSTS-----GISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGS 702 Query: 346 PPQQQQ----------YPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQ-----QYGGY 390 P Q PG Q P G S P + Q +G Q Y Sbjct: 703 PASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQY 762 Query: 391 RPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 QPG P+Q G G+YQQ Sbjct: 763 SSPQPGSALSPRQPSGGQIHTGMGSYQQ 790 Score = 49.3 bits (116), Expect = 6e-06 Identities = 94/373 (25%), Positives = 111/373 (29%), Gaps = 62/373 (16%) Query: 78 PPTQNMPMGPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PP P P P P +S P P A Q Q P P+ + Sbjct: 516 PPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 575 Query: 136 QGPGPNQLNMTN-----SSMNMPSS---SHGSMGGYNHSVPS-SQSMPVQNQMTMS---- 182 Q P + + S P S S G S PS + S Q M +S Sbjct: 576 QAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSR 635 Query: 183 -----------QGQPMGNYGP-RPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQ--HYQGQ 228 PMG G P +S Q P+Q P +G Sbjct: 636 PSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGP 695 Query: 229 QP-PMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMN 287 P P+G V Q P P Q PP+ SGQ D H MN Sbjct: 696 SPSPVGSPASVAQSR---SGPLSPAAVPGNQMPPRPPSGQSD----SIMH------PSMN 742 Query: 288 QQYYPDGHNDYGYQQ--PSYPEQGYDRPYEDSSQHYYEGGNSQYGQ---QQDAYQGPPPQ 342 Q D GY Q P P+ +P S GG G QQ++ PQ Sbjct: 743 QSSIAQ---DRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQ 799 Query: 343 QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQ 402 G Q YP Q Y PS G G P G G Q G P PP Sbjct: 800 GGQYGPQGGYPRQPNYNALPNANYPSAGMAG---GINPMGAGGQMHGQPGIPPYGTLPPG 856 Query: 403 Q--------RPYG 407 + RPYG Sbjct: 857 RMSHASMGNRPYG 869 Score = 44.3 bits (103), Expect = 2e-04 Identities = 89/349 (25%), Positives = 113/349 (32%), Gaps = 97/349 (27%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGG---PPAPHMQN 121 ADS ++ + P P G G M GP P + S M GG PP P + Sbjct: 1121 ADSKKSQPKIQPPSPA-----GSGSMQ--GPQTPQST----SSSMAEGGDLKPPTP--AS 1167 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTM 181 + Q+P P+ PG ++ N S + N P+ P N M Sbjct: 1168 TPHSQIP-----PL--PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDM 1220 Query: 182 SQGQPMGNYGPRPNMSMQPNQGPM--MHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN 239 MG MS +PN+ P M + P S + M G G + G P Sbjct: 1221 -----MGR------MSYEPNKDPYGSMRKAPGSDPF-MSSGQGPN-GGMGDPYSRAAGPG 1267 Query: 240 QGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYG 299 GN MG RQ PY P Y + G GP +G+ G Sbjct: 1268 LGNVAMGPRQHYPYGGP--------------YDRVRTEPGIGP----------EGNMSTG 1303 Query: 300 YQQP----SYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQ 355 QP S P+ G P S+Y PPQQ QQQQ Sbjct: 1304 APQPNLMPSNPDSGMYSP-------------SRY----------PPQQ----QQQQQQRH 1336 Query: 356 QGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQR 404 Y Q G G P P Q QQ P P+P + R Sbjct: 1337 DSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQVSSPAPL----PRPMENR 1381 Score = 30.8 bits (68), Expect = 2.4 Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 19/95 (20%) Query: 75 LPAPPTQNMPMGPGGMNQSGPPP--------------PPRSHNMPSDGMVGGGPPAPHMQ 120 +P M PGGMN+ PP NM GM+G GPP Sbjct: 875 MPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGI 934 Query: 121 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSS 155 N M G M P P G M N+S M +S Sbjct: 935 NSMAG-MINPQGPPYSMGG----TMANNSAGMAAS 964 >gi|119943102 CREB binding protein isoform b [Homo sapiens] Length = 2404 Score = 69.7 bits (169), Expect = 5e-12 Identities = 103/395 (26%), Positives = 122/395 (30%), Gaps = 61/395 (15%) Query: 69 QNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGG---------------- 112 Q Q L +MP G GM G P S N+P V G Sbjct: 1929 QQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPL 1988 Query: 113 -------GPPAPHMQNQMNGQMPGPNHMPMQGP---GPNQLNMTNSSMNMPSSSHGSMGG 162 G P P + Q + GP +Q P P+ L ++ PSS Sbjct: 1989 PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQV 2048 Query: 163 YNHSVPSSQSMPVQ-NQMTMSQGQPMGNYGPRPNMSMQPNQGPM--MHQQPPSQQYNMPQ 219 N + Q M Q T P+P + QP P MHQQP Q N Q Sbjct: 2049 LNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQ 2108 Query: 220 GG--------GQHYQGQQPPMGM-MGQVNQGNHMMGQRQIPPYRPP------QQGPPQQY 264 G Q G P G + +N G++ P YR QQ QQ Sbjct: 2109 AGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQ 2168 Query: 265 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 324 Q+ Q S G G G Q P G Y P + SS Sbjct: 2169 QQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAA 2228 Query: 325 GNSQYGQQQDAYQG----PPPQQGYPP---QQQQYPGQQGYPGQQQGYGPSQG--GPGPQ 375 Q GQ G P QQ QQQQ Q G PGQ P Q PQ Sbjct: 2229 QMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQ 2288 Query: 376 YPNYPQGQGQQYGGYRPTQPGPPQP-----PQQRP 405 + P GQQ Q P P PQ +P Sbjct: 2289 ASHLP---GQQIATSLSNQVRSPAPVQSPRPQSQP 2320 Score = 33.9 bits (76), Expect = 0.28 Identities = 39/151 (25%), Positives = 48/151 (31%), Gaps = 36/151 (23%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNH 132 S LP PP P+ P PPP + MPS + P P Sbjct: 803 SQLPCPPVTQSPLHP------TPPPASTAAGMPS----------------LQHTTP-PGM 839 Query: 133 MPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMS-QGQPMGNYG 191 P Q P Q PS+ S G P S Q Q T + Q Sbjct: 840 TPPQPAAPTQ----------PSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVT 889 Query: 192 PRPNMSMQPNQ--GPMMHQQPPSQQYNMPQG 220 P+P +QP P QQ P+ + P G Sbjct: 890 PQPQTPVQPPSVATPQSSQQQPTPVHAQPPG 920 Score = 31.6 bits (70), Expect = 1.4 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 24/155 (15%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMN 124 ADS N+Q L Q M Q G P P P Q+ ++ Sbjct: 2243 ADSTPNIQQALQQRILQQQQM----KQQIGSPGQPN--------------PMSPQQHMLS 2284 Query: 125 GQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQG 184 GQ P +H+P Q + N S + S S ++ P Q P + ++ G Sbjct: 2285 GQ-PQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTG 2343 Query: 185 QPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQ 219 P + G M+ +QG H P Q +PQ Sbjct: 2344 SP--HPGLAVTMASSIDQG---HLGNPEQSAMLPQ 2373 >gi|119943104 CREB binding protein isoform a [Homo sapiens] Length = 2442 Score = 69.7 bits (169), Expect = 5e-12 Identities = 103/395 (26%), Positives = 122/395 (30%), Gaps = 61/395 (15%) Query: 69 QNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGG---------------- 112 Q Q L +MP G GM G P S N+P V G Sbjct: 1967 QQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPL 2026 Query: 113 -------GPPAPHMQNQMNGQMPGPNHMPMQGP---GPNQLNMTNSSMNMPSSSHGSMGG 162 G P P + Q + GP +Q P P+ L ++ PSS Sbjct: 2027 PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQV 2086 Query: 163 YNHSVPSSQSMPVQ-NQMTMSQGQPMGNYGPRPNMSMQPNQGPM--MHQQPPSQQYNMPQ 219 N + Q M Q T P+P + QP P MHQQP Q N Q Sbjct: 2087 LNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQ 2146 Query: 220 GG--------GQHYQGQQPPMGM-MGQVNQGNHMMGQRQIPPYRPP------QQGPPQQY 264 G Q G P G + +N G++ P YR QQ QQ Sbjct: 2147 AGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQ 2206 Query: 265 SGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 324 Q+ Q S G G G Q P G Y P + SS Sbjct: 2207 QQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSMGQMAA 2266 Query: 325 GNSQYGQQQDAYQG----PPPQQGYPP---QQQQYPGQQGYPGQQQGYGPSQG--GPGPQ 375 Q GQ G P QQ QQQQ Q G PGQ P Q PQ Sbjct: 2267 QMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQ 2326 Query: 376 YPNYPQGQGQQYGGYRPTQPGPPQP-----PQQRP 405 + P GQQ Q P P PQ +P Sbjct: 2327 ASHLP---GQQIATSLSNQVRSPAPVQSPRPQSQP 2358 Score = 33.9 bits (76), Expect = 0.28 Identities = 39/151 (25%), Positives = 48/151 (31%), Gaps = 36/151 (23%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNH 132 S LP PP P+ P PPP + MPS + P P Sbjct: 841 SQLPCPPVTQSPLHP------TPPPASTAAGMPS----------------LQHTTP-PGM 877 Query: 133 MPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMS-QGQPMGNYG 191 P Q P Q PS+ S G P S Q Q T + Q Sbjct: 878 TPPQPAAPTQ----------PSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVT 927 Query: 192 PRPNMSMQPNQ--GPMMHQQPPSQQYNMPQG 220 P+P +QP P QQ P+ + P G Sbjct: 928 PQPQTPVQPPSVATPQSSQQQPTPVHAQPPG 958 Score = 31.6 bits (70), Expect = 1.4 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 24/155 (15%) Query: 65 ADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMN 124 ADS N+Q L Q M Q G P P P Q+ ++ Sbjct: 2281 ADSTPNIQQALQQRILQQQQM----KQQIGSPGQPN--------------PMSPQQHMLS 2322 Query: 125 GQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQG 184 GQ P +H+P Q + N S + S S ++ P Q P + ++ G Sbjct: 2323 GQ-PQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTG 2381 Query: 185 QPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQ 219 P + G M+ +QG H P Q +PQ Sbjct: 2382 SP--HPGLAVTMASSIDQG---HLGNPEQSAMLPQ 2411 >gi|50345997 E1A binding protein p300 [Homo sapiens] Length = 2414 Score = 69.3 bits (168), Expect = 6e-12 Identities = 110/439 (25%), Positives = 139/439 (31%), Gaps = 89/439 (20%) Query: 49 QYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108 Q QML + + Q P P T P G P P + P + Sbjct: 1823 QQAQMLRRRMASMQRTGVVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNS 1882 Query: 109 MVGGGP----PAPHMQNQMNGQMPGPN-----HMPMQGPGPNQLNMTNSSMNMPSSSHGS 159 M P P Q + GQ+ P P+ GP P + M + Sbjct: 1883 MPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQM 1942 Query: 160 MGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPR----PNMSMQPNQGPM-MHQQPPSQQ 214 P MP M PMG P P+ ++P GP M QQPP Q Sbjct: 1943 AHVQIFQRPIQHQMPPMTPMA-----PMGMNPPPMTRGPSGHLEPGMGPTGMQQQPPWSQ 1997 Query: 215 YNMPQGGGQHYQGQQPPMGMMGQVNQGNHM-------MGQRQIPPYRP------------ 255 +PQ Q Q P MM G + +GQ I P +P Sbjct: 1998 GGLPQP--QQLQSGMPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQALQNLL 2055 Query: 256 --------PQQ---------GPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDY 298 P Q PQ + +Y++ P G Q P G Sbjct: 2056 RTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIPG--QPGMPQGQP-- 2111 Query: 299 GYQQPSYP-EQGYDRPYEDSSQHYYEGGNSQYG--QQQDAYQGPPPQQGYPPQQQQYP-- 353 G Q P+ P +QG + + + G + G QQQ Q PP G PQ QQ Sbjct: 2112 GLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPMGGMSPQAQQMNMN 2171 Query: 354 --------------GQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQ 399 Q QQQG GP G GP N+ Q Q Q GY PPQ Sbjct: 2172 HNTMPSQFRDILRRQQMMQQQQQQGAGP---GIGPGMANHNQFQQPQGVGY------PPQ 2222 Query: 400 PPQQRPYGYDQGQYGNYQQ 418 Q+ + Q Q GN Q Sbjct: 2223 QQQRMQHHMQQMQQGNMGQ 2241 Score = 44.7 bits (104), Expect = 2e-04 Identities = 108/463 (23%), Positives = 150/463 (32%), Gaps = 100/463 (21%) Query: 6 AAPRQRGK--GEITP-----AAIQKMLDDNNHLIQCIMDSQNKGKT----SECSQYQQML 54 A P +GK G++TP A + ++ M Q +T + +Q+ + Sbjct: 1893 AGPVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPI 1952 Query: 55 HTNLVYLATIADSNQNMQSLLPAPPTQNMP-MGPGGMNQSGPPPPPRSHNMPSDGMVGGG 113 + + +A N + P P MGP GM Q PP +P + G Sbjct: 1953 QHQMPPMTPMAPMGMNPPPMTRGPSGHLEPGMGPTGMQQQ---PPWSQGGLPQPQQLQSG 2009 Query: 114 PPAPHMQN-QMNGQ------MPGPNHM---PMQGPGPNQLNMTN--SSMNMPSS--SHGS 159 P P M + +GQ PG + P++ +Q + N ++ PSS Sbjct: 2010 MPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQALQNLLRTLRSPSSPLQQQQ 2069 Query: 160 MGGYNHSVP---------------SSQSMPVQNQMTMSQGQP-------MGNYGPRPNMS 197 + H+ P +S P+ Q M QGQP G G N + Sbjct: 2070 VLSILHANPQLLAAFIKQRAAKYANSNPQPIPGQPGMPQGQPGLQPPTMPGQQGVHSNPA 2129 Query: 198 MQPNQGPM--------MHQQPPSQQYNMPQGGGQHYQGQQPPMG---------------- 233 MQ N PM + QQ P QQ P GG Q QQ M Sbjct: 2130 MQ-NMNPMQAGVQRAGLPQQQPQQQLQPPMGG-MSPQAQQMNMNHNTMPSQFRDILRRQQ 2187 Query: 234 -MMGQVNQG----------NHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHG---- 278 M Q QG NH Q+ PPQQ Q+ Q+ G+ G Sbjct: 2188 MMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLPQ 2247 Query: 279 GQGPPEGMNQQYYPDGHNDYGYQQPSYPE----QGYDRPYEDSSQHY--YEGGNSQYGQQ 332 G G + Q Y P P Q + P + S H + NS Q Sbjct: 2248 ALGAEAGASLQAYQQRLLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQV 2307 Query: 333 QDAYQGPPPQ-QGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGP 374 + P P+ Q PP P Q P P P P Sbjct: 2308 RSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHH-VSPQTSSPHP 2349 Score = 39.3 bits (90), Expect = 0.007 Identities = 54/196 (27%), Positives = 73/196 (37%), Gaps = 25/196 (12%) Query: 79 PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHM-----QNQMN--GQ--MPG 129 P NM GM +GP P P M+ G P M Q+ +N GQ M Sbjct: 671 PGPNMGQPQPGMTSNGPLPDP--------SMIRGSVPNQMMPRITPQSGLNQFGQMSMAQ 722 Query: 130 PNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMG-GYNHSVPSSQSMPVQNQMTMSQGQPMG 188 P +P Q P P Q + + P + + MG G PS+Q + SQG + Sbjct: 723 PPIVPRQTP-PLQ---HHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVT 778 Query: 189 NYGPRPNMSMQP-NQGPMMHQQPPSQQYNMPQGG-GQHYQGQQPPMGMMGQVNQGNHMMG 246 N P+ P +Q M P MP G G H Q P + Q N + + Sbjct: 779 NIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQ-NSPSPVPS 837 Query: 247 QRQIPPYRPPQQGPPQ 262 + P + PP G Q Sbjct: 838 RTPTPHHTPPSIGAQQ 853 Score = 36.6 bits (83), Expect = 0.043 Identities = 64/240 (26%), Positives = 79/240 (32%), Gaps = 50/240 (20%) Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN--QGNHMMGQRQIP-PYRPPQ 257 N GP M Q P N P +G P MM ++ G + GQ + P P+ Sbjct: 670 NPGPNMGQPQPGMTSNGPLPDPSMIRGSVPNQ-MMPRITPQSGLNQFGQMSMAQPPIVPR 728 Query: 258 QGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGY---DRPY 314 Q PP Q+ GQ G PP G + + Q +P QG + P Sbjct: 729 QTPPLQHHGQ------LAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPL 782 Query: 315 EDSSQHYYEGGNSQYGQQQDAYQG--------PPPQQG---YPPQQQQYPGQQGYP---- 359 SS G + Q Q + PP QG + PQ Q Q P Sbjct: 783 APSS------GQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVP 836 Query: 360 -------------GQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQ-PGPP--QPPQQ 403 G QQ + P P P P G Q P Q P PP Q PQQ Sbjct: 837 SRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPTPPTTQLPQQ 896 Score = 30.0 bits (66), Expect = 4.1 Identities = 58/218 (26%), Positives = 81/218 (37%), Gaps = 28/218 (12%) Query: 9 RQRGKGEITPAAI---QKMLDDNNHLIQCIMDSQNKGKTSECSQYQQML--------HTN 57 R++ GE+ + + M + NH+ C S + + C+ +Q++ H Sbjct: 354 REQANGEVRQCNLPHCRTMKNVLNHMTHC--QSGKSCQVAHCASSRQIISHWKNCTRHDC 411 Query: 58 LVYLATI-ADSNQNMQSLLP-APPTQNMPMGPGGMNQSGPPPPPRSHNMPSD-GMVGGGP 114 V L A +N Q +L AP P G QS P S PS Sbjct: 412 PVCLPLKNAGDKRNQQPILTGAPVGLGNPSSLGVGQQSAPNLSTVSQIDPSSIERAYAAL 471 Query: 115 PAPHMQNQM--NGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPS--S 170 P+ NQM Q+ N Q PG + M S NM +S G GG PS S Sbjct: 472 GLPYQVNQMPTQPQVQAKNQQNQQ-PGQSPQGMRPMS-NMSASPMGVNGGVGVQTPSLLS 529 Query: 171 QSM-----PVQNQMTMSQGQPMGNYGPRPNMSMQPNQG 203 SM QN M MS+ + + GP P + G Sbjct: 530 DSMLHSAINSQNPM-MSENASVPSLGPMPTAAQPSTTG 566 Score = 30.0 bits (66), Expect = 4.1 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 23/151 (15%) Query: 67 SNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQ 126 + Q + +PAP M PG +Q+ PPP ++ PP + Q+ Sbjct: 851 AQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPT----------PPTTQLPQQVQPS 900 Query: 127 MPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQP 186 +P P T +S+ P++ +P + P+ +GQ Sbjct: 901 LPAAPSADQPQQQPRSQQSTAASVPTPTAP---------LLPPQPATPLSQPAVSIEGQV 951 Query: 187 MGNYGPRPNMSMQPNQGPMMHQQPPSQQYNM 217 P S + N + +Q PSQ+ M Sbjct: 952 S---NPPSTSSTEVNSQAIAEKQ-PSQEVKM 978 >gi|192807323 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform A [Homo sapiens] Length = 1679 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|192807320 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform F [Homo sapiens] Length = 1613 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|192807318 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform E [Homo sapiens] Length = 1614 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|192807316 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform D [Homo sapiens] Length = 1616 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|192807314 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform C [Homo sapiens] Length = 1617 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|192807312 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|21071056 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 67.4 bits (163), Expect = 2e-11 Identities = 101/346 (29%), Positives = 124/346 (35%), Gaps = 81/346 (23%) Query: 88 GGMNQSGPPPPPRSHNMPSDGMV-GGGP-PAPHMQNQMNGQMPGP----NHMPMQGPGP- 140 GG + GP P P PS G + G P P+P + M G PGP + +P QGPG Sbjct: 9 GGTPRPGPSPGPG----PSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGY 64 Query: 141 NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQP 200 Q NM M+ P S G P NQM +G M + G + M P Sbjct: 65 PQDNM--HQMHKPMESMHEKG--------MSDDPRYNQM---KGMGMRSGG---HAGMGP 108 Query: 201 NQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG--QVNQGNHMMGQRQIPPYRPPQQ 258 PM SQ Y P GG +H P G Q++ G P P Sbjct: 109 PPSPM---DQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSG----------PGGAPLD 155 Query: 259 GPPQQYSGQEDYYGDQYSHGGQGP-PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS 317 G Q GQ++ +GP P NQ + Q +Y +P D Sbjct: 156 GADPQALGQQN----------RGPTPFNQNQLH------QLRAQIMAYKMLARGQPLPDH 199 Query: 318 SQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYP 377 Q +G G QQ PPP PG PG G GP GPGP P Sbjct: 200 LQMAVQGKRPMPGMQQQMPTLPPPS-----VSATGPG----PGPGPGPGP---GPGPAPP 247 Query: 378 NYPQGQGQQYGGYRPTQPGPP--------QPPQQRPYGYDQGQYGN 415 NY + G GG PGP QPP P + +G N Sbjct: 248 NYSRPHGM--GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMAN 291 Score = 43.9 bits (102), Expect = 3e-04 Identities = 64/255 (25%), Positives = 82/255 (32%), Gaps = 57/255 (22%) Query: 27 DNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMG 86 DN H + M+S ++ S+ +Y QM + M M Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQM---------------------------KGMGMR 99 Query: 87 PGGMNQSGPPPPP-----RSHNMPSDGMVGGGPPAPHMQNQMNGQM-PGPNHMPMQGPGP 140 GG GPPP P + + P G P P QM GP P+ G P Sbjct: 100 SGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159 Query: 141 NQLNMTNS-----SMNMPSSSHGSMGGY-----NHSVPSSQSMPVQNQMTMSQGQPMGNY 190 L N + N + Y +P M VQ + M Q Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPT 219 Query: 191 GPRPNMSMQ-----PNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMM 245 P P++S P GP P Y+ P G G PP G G V G M Sbjct: 220 LPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMG---GPNMPPPGPSG-VPPG--MP 273 Query: 246 GQRQIPPYRPPQQGP 260 GQ PP PP+ P Sbjct: 274 GQ---PPGGPPKPWP 285 Score = 43.1 bits (100), Expect = 5e-04 Identities = 78/324 (24%), Positives = 98/324 (30%), Gaps = 53/324 (16%) Query: 67 SNQNMQSLLPAPPTQNMPM---GPGGMNQSGPPPPPRSHNM--PSDGMVGGGPPAPHMQN 121 S +M P PP+ P+ GPGG P H M P + M G N Sbjct: 38 SAHSMMGPSPGPPSAGHPIPTQGPGGY------PQDNMHQMHKPMESMHEKGMSDDPRYN 91 Query: 122 QMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS---VPSSQSMPVQNQ 178 QM G G G GP M S PS +GG H+ VP+S Sbjct: 92 QMKGM--GMRSGGHAGMGPPPSPMDQHSQGYPSP----LGGSEHASSPVPASGPSSGPQM 145 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQV 238 + G P+ G P Q N+GP Q Q + QP + Sbjct: 146 SSGPGGAPLD--GADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203 Query: 239 NQGNHMMG--QRQIPPYRPPQ-----------QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG M Q+Q+P PP GP Y + GG P Sbjct: 204 VQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP-- 261 Query: 286 MNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQ---------YGQQQDAY 336 P G + P P G +P+ + S G+ A Sbjct: 262 ------PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAP 315 Query: 337 QGPPPQQG-YPPQQQQYPGQQGYP 359 PP P Q Q PGQ P Sbjct: 316 PAVPPAASPVMPPQTQSPGQPAQP 339 Score = 42.7 bits (99), Expect = 6e-04 Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 23/137 (16%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PAPP + P G GG N PPP P G GGPP P Sbjct: 244 PAPPNYSRPHGMGGPNM--PPPGPSGVPPGMPGQPPGGPPKPW----------------P 285 Query: 136 QGPGPNQLNMTNSSMNM-PSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRP 194 +GP N T++ + P G +VP + S PV T S GQP P P Sbjct: 286 EGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS-PVMPPQTQSPGQPA---QPAP 341 Query: 195 NMSMQPNQGPMMHQQPP 211 + + Q + Q P Sbjct: 342 MVPLHQKQSRITPIQKP 358 >gi|48255900 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a [Homo sapiens] Length = 1590 Score = 65.9 bits (159), Expect = 7e-11 Identities = 91/333 (27%), Positives = 116/333 (34%), Gaps = 53/333 (15%) Query: 84 PMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQL 143 P PG M GP P P PS G + G P P G PG H M GP P Sbjct: 4 PTDPGAMPHPGPSPGPG----PSPGPILGPSPGP-------GPSPGSVH-SMMGPSPGPP 51 Query: 144 NMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQG 203 ++++ M S+ G + P + G G P+ M P Q Sbjct: 52 SVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQS 111 Query: 204 PM-MHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ 262 PM H Q + P G +H + M G PP PP Q P Sbjct: 112 PMDQHSQGYMSPHPSPLGAPEHV---------------SSPMSGGGPTPPQMPPSQ-PGA 155 Query: 263 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY 322 G S +GP + P + Q +Y +P ++ Q Sbjct: 156 LIPGDP----QAMSQPNRGP-----SPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAV 206 Query: 323 EGGNSQYG--QQQDAYQGPPPQQGYPPQQQQYPGQQ-GYPGQQQGYGPS------QGGPG 373 +G + G QQQ Q QQ QQQQ P QQ P QQ P+ GPG Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266 Query: 374 PQY--PNYPQGQGQQYGGYRPTQPGPP---QPP 401 P+ P+ PQ G RP+ P PP QPP Sbjct: 267 PELSGPSTPQKLPVPAPGGRPS-PAPPAAAQPP 298 Score = 52.4 bits (124), Expect = 8e-07 Identities = 90/365 (24%), Positives = 112/365 (30%), Gaps = 92/365 (25%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQ------------- 122 P+P + + MGP P PP SH MP+ G H ++ Sbjct: 35 PSPGSVHSMMGPS------PGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVED 88 Query: 123 -MNGQMPGPN-HMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNH-SVPSSQSMPVQNQM 179 G M G P G GP Q M S S +G H S P S P QM Sbjct: 89 IHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQM 148 Query: 180 TMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN 239 S QP P QPN+GP P + Q Q + G Sbjct: 149 PPS--QPGALIPGDPQAMSQPNRGP-----SPFSPVQLHQLRAQILAYKMLARGQPLPET 201 Query: 240 QGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYG 299 + G+R +P + QQ QQ Q+ Q Q PP+ QQ Sbjct: 202 LQLAVQGKRTLPGLQQQQQ-QQQQQQQQQQQQQQQQQQPQQQPPQPQTQQ---------- 250 Query: 300 YQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 359 QQP+ Y+RP GP P+ P Q+ P Sbjct: 251 QQQPAL--VNYNRP-----------------------SGPGPELSGPSTPQKLP------ 279 Query: 360 GQQQGYGPSQGG-PGPQYPNYPQGQGQQYGGYRPTQPGPPQP--------------PQQR 404 P+ GG P P P Q G QP P QP P Q+ Sbjct: 280 ------VPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQK 333 Query: 405 PYGYD 409 P G D Sbjct: 334 PQGLD 338 Score = 40.0 bits (92), Expect = 0.004 Identities = 39/165 (23%), Positives = 50/165 (30%), Gaps = 21/165 (12%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMV------GGGPPAPHMQNQMNGQ 126 S L AP + PM GG PP +P D G P +P +Q+ Q Sbjct: 126 SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQ 185 Query: 127 MPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQP 186 + + P P L + ++ G Q Q Q Q Q Sbjct: 186 ILAYKMLARGQPLPETLQLAVQGKR-------TLPGLQQQQQQQQQQQQQQQQQQQQQQQ 238 Query: 187 MGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPP 231 P+P Q QQP YN P G G G P Sbjct: 239 PQQQPPQPQTQQQ--------QQPALVNYNRPSGPGPELSGPSTP 275 >gi|48255898 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b [Homo sapiens] Length = 1572 Score = 65.9 bits (159), Expect = 7e-11 Identities = 91/333 (27%), Positives = 116/333 (34%), Gaps = 53/333 (15%) Query: 84 PMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQL 143 P PG M GP P P PS G + G P P G PG H M GP P Sbjct: 4 PTDPGAMPHPGPSPGPG----PSPGPILGPSPGP-------GPSPGSVH-SMMGPSPGPP 51 Query: 144 NMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQG 203 ++++ M S+ G + P + G G P+ M P Q Sbjct: 52 SVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQS 111 Query: 204 PM-MHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ 262 PM H Q + P G +H + M G PP PP Q P Sbjct: 112 PMDQHSQGYMSPHPSPLGAPEHV---------------SSPMSGGGPTPPQMPPSQ-PGA 155 Query: 263 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY 322 G S +GP + P + Q +Y +P ++ Q Sbjct: 156 LIPGDP----QAMSQPNRGP-----SPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAV 206 Query: 323 EGGNSQYG--QQQDAYQGPPPQQGYPPQQQQYPGQQ-GYPGQQQGYGPS------QGGPG 373 +G + G QQQ Q QQ QQQQ P QQ P QQ P+ GPG Sbjct: 207 QGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPG 266 Query: 374 PQY--PNYPQGQGQQYGGYRPTQPGPP---QPP 401 P+ P+ PQ G RP+ P PP QPP Sbjct: 267 PELSGPSTPQKLPVPAPGGRPS-PAPPAAAQPP 298 Score = 52.4 bits (124), Expect = 8e-07 Identities = 90/365 (24%), Positives = 112/365 (30%), Gaps = 92/365 (25%) Query: 76 PAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQ------------- 122 P+P + + MGP P PP SH MP+ G H ++ Sbjct: 35 PSPGSVHSMMGPS------PGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVED 88 Query: 123 -MNGQMPGPN-HMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNH-SVPSSQSMPVQNQM 179 G M G P G GP Q M S S +G H S P S P QM Sbjct: 89 IHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQM 148 Query: 180 TMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN 239 S QP P QPN+GP P + Q Q + G Sbjct: 149 PPS--QPGALIPGDPQAMSQPNRGP-----SPFSPVQLHQLRAQILAYKMLARGQPLPET 201 Query: 240 QGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYG 299 + G+R +P + QQ QQ Q+ Q Q PP+ QQ Sbjct: 202 LQLAVQGKRTLPGLQQQQQ-QQQQQQQQQQQQQQQQQQPQQQPPQPQTQQ---------- 250 Query: 300 YQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYP 359 QQP+ Y+RP GP P+ P Q+ P Sbjct: 251 QQQPAL--VNYNRP-----------------------SGPGPELSGPSTPQKLP------ 279 Query: 360 GQQQGYGPSQGG-PGPQYPNYPQGQGQQYGGYRPTQPGPPQP--------------PQQR 404 P+ GG P P P Q G QP P QP P Q+ Sbjct: 280 ------VPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQK 333 Query: 405 PYGYD 409 P G D Sbjct: 334 PQGLD 338 Score = 40.0 bits (92), Expect = 0.004 Identities = 39/165 (23%), Positives = 50/165 (30%), Gaps = 21/165 (12%) Query: 73 SLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMV------GGGPPAPHMQNQMNGQ 126 S L AP + PM GG PP +P D G P +P +Q+ Q Sbjct: 126 SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQ 185 Query: 127 MPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQP 186 + + P P L + ++ G Q Q Q Q Q Sbjct: 186 ILAYKMLARGQPLPETLQLAVQGKR-------TLPGLQQQQQQQQQQQQQQQQQQQQQQQ 238 Query: 187 MGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPP 231 P+P Q QQP YN P G G G P Sbjct: 239 PQQQPPQPQTQQQ--------QQPALVNYNRPSGPGPELSGPSTP 275 >gi|151301053 RNA binding motif protein 33 [Homo sapiens] Length = 1170 Score = 65.9 bits (159), Expect = 7e-11 Identities = 89/360 (24%), Positives = 126/360 (35%), Gaps = 44/360 (12%) Query: 83 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHM--QNQMNGQMPGPNHMPMQGPGP 140 +P P + Q+ PPPPP P + P P + Q+ + P HMP Q P Sbjct: 309 LPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETP 368 Query: 141 NQLNMTNSSMN--MPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSM 198 + MT + P + H N + PVQ + QP GP+ Sbjct: 369 RMM-MTPPPVTPQQPKNIH-----INPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPG- 421 Query: 199 QPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPP---------MGMMGQVNQGNHMMGQRQ 249 P + P P ++ P Q + PP +G+ G+ +H+ +++ Sbjct: 422 -PPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQR 480 Query: 250 IPPYRPP-------QQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYP--DGHNDYGY 300 PP PP P Q G ++ GQ P + P G Sbjct: 481 SPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGI 540 Query: 301 QQPSYPEQGYDRPYEDSSQHYYEGGNSQY--GQQQDAYQGP------PPQQGYPPQQQQY 352 S P RP+ Q + G + Q QGP PP Q P Q QQ Sbjct: 541 LHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQ 600 Query: 353 PGQQGYPGQQQGYGPS-QGGPGPQYP--NYPQGQGQQYGGYRPTQPGPPQP---PQQRPY 406 P Q P Q + P Q P PQ+P + PQ Q + + P P P PQ RP+ Sbjct: 601 PPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRPH 660 Score = 32.3 bits (72), Expect = 0.82 Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 17/143 (11%) Query: 72 QSLLPAP-----PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQ 126 Q LP P PT P G ++ PPP P PP H Sbjct: 559 QPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQ-----PPPQHQPPHQPPH 613 Query: 127 MPGPNHM-----PMQGPGPNQLNMTNSSMNMPSSSHGSMG--GYNHSVPSSQSMPVQNQM 179 P P H P Q P +Q + + +++P M + V ++Q ++M Sbjct: 614 QPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRPHVQTAQPQASSSRM 673 Query: 180 TMSQGQPMGNYGPRPNMSMQPNQ 202 Q Q + + N+S +P Q Sbjct: 674 QCPQRQGLRHNTTSQNVSKRPMQ 696 >gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma) [Homo sapiens] Length = 526 Score = 65.1 bits (157), Expect = 1e-10 Identities = 76/285 (26%), Positives = 96/285 (33%), Gaps = 36/285 (12%) Query: 146 TNSSMNMPSSSHGS---MGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ 202 +N + S+G+ G +S SSQ Q+ SQ YG S +Q Sbjct: 3 SNDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQ 62 Query: 203 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ 262 Q Q Y G Y Q GQ Q P Y QQ P Sbjct: 63 NTGYGTQSTPQGYGSTGG----YGSSQSSQSSYGQ---------QSSYPGYG--QQPAPS 107 Query: 263 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSY-PEQGYDRPYEDSSQHY 321 SG YG G P+ + P YG QQ SY +Q Y+ P Q+ Sbjct: 108 STSGS---YGSSSQSSSYGQPQSGSYSQQPS----YGGQQQSYGQQQSYNPPQGYGQQNQ 160 Query: 322 YE---------GGNSQYGQQQDAYQ-GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGG 371 Y GG YGQ Q + G GY Q Q G G GQQ G +GG Sbjct: 161 YNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGG 220 Query: 372 PGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNY 416 G G + GGY P G + + G D+G + + Sbjct: 221 SGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKF 265 Score = 61.2 bits (147), Expect = 2e-09 Identities = 72/236 (30%), Positives = 77/236 (32%), Gaps = 47/236 (19%) Query: 185 QPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHM 244 Q +YG P QP QG + Q SQ Y G Q Y G G Sbjct: 9 QATQSYGAYPT---QPGQG---YSQQSSQPY-----GQQSYSGYSQSTDTSGYGQSSYSS 57 Query: 245 MGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPS 304 GQ Q Y Q PQ Y Y Q S G QQ S Sbjct: 58 YGQSQNTGYGT--QSTPQGYGSTGGYGSSQSSQSSYG-------------------QQSS 96 Query: 305 YPEQGYD-RPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQ 363 YP G P S + +S YGQ PQ G QQ Y GQQ GQQQ Sbjct: 97 YPGYGQQPAPSSTSGSYGSSSQSSSYGQ---------PQSGSYSQQPSYGGQQQSYGQQQ 147 Query: 364 GYGPSQG-GPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ 418 Y P QG G QY + G G GG Q G G YGN Q Sbjct: 148 SYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQ----DQSSMSSGGGSGGGYGNQDQ 199 Score = 41.6 bits (96), Expect = 0.001 Identities = 62/221 (28%), Positives = 74/221 (33%), Gaps = 26/221 (11%) Query: 66 DSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHN--MPSDGMVGGGPPAPHMQNQM 123 D Q A PTQ G G QS P +S++ S G G + Q Sbjct: 5 DYTQQATQSYGAYPTQP---GQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQS 61 Query: 124 NGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHS-VPSSQSMPV-QNQMTM 181 G P QG G ++ S S GY PSS S + + Sbjct: 62 QNTGYGTQSTP-QGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSS 120 Query: 182 SQGQPM-GNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240 S GQP G+Y S QP+ G Q YN PQG GQ Q G G Sbjct: 121 SYGQPQSGSY------SQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGG 174 Query: 241 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQG 281 GN+ GQ Q G YG+Q GG G Sbjct: 175 GNY--GQ---------DQSSMSSGGGSGGGYGNQDQSGGGG 204 >gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] Length = 166 Score = 64.7 bits (156), Expect = 1e-10 Identities = 63/145 (43%), Positives = 67/145 (46%), Gaps = 40/145 (27%) Query: 280 QGPPEGMNQQYYP---DGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAY 336 QGPP G QQ P DG+ D G QQ P+QG GQQQ Sbjct: 47 QGPPLG-GQQSQPSAGDGNQDDGPQQGP-PQQG--------------------GQQQ--- 81 Query: 337 QGPPPQQGYPPQQQQYPGQQGYPGQQQG--YGPSQGGPGPQYP-NYPQGQGQQYG---GY 390 QGPPP QG P Q P Q G+P QG GP Q G P+ P PQG QQ G G Sbjct: 82 QGPPPPQGKP---QGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP 138 Query: 391 RPTQPGPPQ-PPQQ--RPYGYDQGQ 412 P PG PQ PP Q RP G QGQ Sbjct: 139 PPPPPGKPQGPPPQGGRPQGPPQGQ 163 Score = 52.4 bits (124), Expect = 8e-07 Identities = 48/142 (33%), Positives = 54/142 (38%), Gaps = 39/142 (27%) Query: 183 QGQPMGNYGPRP-----NMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGM-MG 236 QG P+G +P N P QGP PQ GGQ QG PP G G Sbjct: 47 QGPPLGGQQSQPSAGDGNQDDGPQQGP-------------PQQGGQQQQGPPPPQGKPQG 93 Query: 237 QVNQGNH---MMGQRQIPPY-----RPPQ---QGPPQQYSGQEDYYGDQYSHGGQGPPEG 285 QG H G+ Q PP RPP+ QGPPQQ Q+ G PP G Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQ---------GPPPPPPG 144 Query: 286 MNQQYYPDGHNDYGYQQPSYPE 307 Q P G G Q P+ Sbjct: 145 KPQGPPPQGGRPQGPPQGQSPQ 166 Score = 34.7 bits (78), Expect = 0.17 Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 12/71 (16%) Query: 78 PPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQN-----QMNGQMPGPNH 132 PP Q P GP Q G PPPP+ P GG P P Q G GP Sbjct: 85 PPPQGKPQGP--PQQGGHPPPPQGR--PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPP 140 Query: 133 MP---MQGPGP 140 P QGP P Sbjct: 141 PPPGKPQGPPP 151 Score = 32.7 bits (73), Expect = 0.63 Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 7/67 (10%) Query: 78 PPTQNMPMGPGGMNQSGPPPPPRS--HNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPM 135 PP Q P GP Q G P PPR P G GPP P Q P P Sbjct: 102 PPPQGRPQGP--PQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKP---QGPPPQGGRP 156 Query: 136 QGPGPNQ 142 QGP Q Sbjct: 157 QGPPQGQ 163 Score = 32.3 bits (72), Expect = 0.82 Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 8/99 (8%) Query: 79 PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQ---MNGQMPGPNHMPM 135 P Q P G Q PPP + P GG PP P + Q G P P Sbjct: 69 PQQGPPQQGGQQQQGPPPPQGKPQGPPQQ---GGHPPPPQGRPQGPPQQGGHPRPPRGRP 125 Query: 136 QGPGPNQLNMTNSSMNMPSSSHG--SMGGYNHSVPSSQS 172 QGP + P G GG P QS Sbjct: 126 QGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQS 164 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 5/44 (11%) Query: 76 PAPPTQNMPMGPG--GMNQSGPPPPP--RSHNMPSDGMVGGGPP 115 P PP + P GP G +Q GPPPPP + P G GPP Sbjct: 118 PRPP-RGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPP 160 >gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] Length = 1745 Score = 62.8 bits (151), Expect = 6e-10 Identities = 105/395 (26%), Positives = 142/395 (35%), Gaps = 68/395 (17%) Query: 76 PAPPTQNMPMG----PGGMNQSGPPPP-----PRSHNMPSD--GMVG-GGPPAPHMQNQM 123 P PP ++ G PG Q+G P P PR P+ G+ G G P Sbjct: 574 PGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGP 633 Query: 124 NGQMPGP-----NHMPMQGPGPNQLNMTNSSMNMPSS--------SHGSMGGYNHSVPSS 170 G+ PGP NH PGP L T P + S G +G H P+ Sbjct: 634 PGE-PGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTG 692 Query: 171 QSMPVQNQMTMSQGQPMGNYGPRP------NMSMQPNQGPMMHQQPPSQQYNMPQGGGQH 224 + Q P G GPR N +Q +G P + ++ G Q Sbjct: 693 EKGA---QGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQG 749 Query: 225 Y------QGQQPPMGMMGQVNQGNH-----------MMGQRQIPPYRPPQQGPPQQ--YS 265 +G+ P G GQ Q +G +P Y P + GP + Sbjct: 750 KPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGY-PGRPGPKGSIGFP 808 Query: 266 GQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGG 325 G G++ G G P ++ P + G QP G P D Q G Sbjct: 809 GPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERG--QPG--ATGQPGPKGDVGQDGAPGI 864 Query: 326 NSQYGQQQDAYQGPP--PQQGYPPQQQQYPGQQGYPGQ--QQGYGPSQGGPGPQYPNYPQ 381 + G QGPP P PP Q G+ G+PGQ + G+ G PGP PQ Sbjct: 865 PGEKGLP--GLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQ 922 Query: 382 GQGQQYG--GYRPTQPGPPQPPQQRPYGYDQGQYG 414 G+ + G G R PGPP PP ++ +G+ G Sbjct: 923 GKTGEVGPLGER-GPPGPPGPPGEQGLPGLEGREG 956 Score = 56.2 bits (134), Expect = 5e-08 Identities = 96/350 (27%), Positives = 125/350 (35%), Gaps = 69/350 (19%) Query: 75 LPAPPTQNMPMGP-GGMNQSGPPPPPRSHNMPSDGMVGG-GPPAPHMQNQMNGQMPGPNH 132 LP P + G G + Q GPP DG G GPP P Q PGP Sbjct: 555 LPGLPGEKGQRGDFGHVGQPGPPG--------EDGERGAEGPPGPTGQ----AGEPGPRG 602 Query: 133 M--PMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 190 + P PGP P + G++G P P Q SQG P Sbjct: 603 LLGPRGSPGPTGRPGVTGIDGAPGAK-GNVGP-----PGEPGPPGQQGNHGSQGLP---- 652 Query: 191 GPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQ-HYQGQQPPMGMMGQVNQGNHMMGQRQ 249 GP+ + +GP + P +P G + G + P G G QG Sbjct: 653 GPQGLIGTPGEKGPPGNPGIPG----LPGSDGPLGHPGHEGPTGEKGA--QG-------- 698 Query: 250 IPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQ----QPSY 305 PP P Y G G + G QG + +P D G + +P Sbjct: 699 -----PPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGA 753 Query: 306 P-EQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQG 364 P +G D P EG Q GQ + +GPP G + PG GYPG+ Sbjct: 754 PGPRGEDGP---------EGPKGQAGQAGE--EGPPGSAG-EKGKLGVPGLPGYPGRPGP 801 Query: 365 YGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYG 414 G S G PGP P +G+ + G +P G PP R ++GQ G Sbjct: 802 KG-SIGFPGPLGPIGEKGKSGKTG--QPGLEGERGPPGSRG---ERGQPG 845 Score = 53.1 bits (126), Expect = 4e-07 Identities = 95/352 (26%), Positives = 120/352 (34%), Gaps = 64/352 (18%) Query: 84 PMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG-PNHMPMQGPGPNQ 142 P PG GP PP P D GPP P +PG P ++GP P Sbjct: 394 PGAPGPQGVVGPSGPPGPPGFPGDP----GPPGP-------AGLPGIPGIDGIRGP-PGT 441 Query: 143 LNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPN 201 + M MP + GS G S +Q+ V Q +S P G G + Sbjct: 442 VIM------MPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVG------LTGR 489 Query: 202 QGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNH--MMGQRQIP-------- 251 GP+ P + G Q +G Q P G G+V + G R +P Sbjct: 490 PGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGD 549 Query: 252 ------PYRPPQQGPPQQYS--GQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQP 303 P P ++G + GQ G+ G +GPP Q P G Sbjct: 550 RGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLG---- 605 Query: 304 SYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQ 363 +G P +G G GPP + G PP QQ G QG PG Q Sbjct: 606 ---PRGSPGPTGRPGVTGIDGAPGAKGNV-----GPPGEPG-PPGQQGNHGSQGLPGPQG 656 Query: 364 GYG-PSQGGP--GPQYPNYPQGQGQ--QYGGYRPT-QPGPPQPP-QQRPYGY 408 G P + GP P P P G G PT + G PP P GY Sbjct: 657 LIGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGY 708 Score = 48.1 bits (113), Expect = 1e-05 Identities = 91/370 (24%), Positives = 118/370 (31%), Gaps = 53/370 (14%) Query: 76 PAPPTQNMPMGPGGMN-QSGPPPPPRSHNMPSD----GMVGG----------GPPAPHMQ 120 P P GP G+ GPP P ++ P + G GG GP P + Sbjct: 979 PGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGK 1038 Query: 121 NQMNGQMPGPNHMPMQG-PGP-NQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQ 178 G+ P G PGP L ++ PS G G P + Sbjct: 1039 KGSRGERGPPGPTGKDGIPGPLGPLGPPGAAG--PSGEEGDKGDVG--APGHKGSKGDKG 1094 Query: 179 MTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHY---------QGQQ 229 GQP G GP + G + PP G + + QG Sbjct: 1095 DAGPPGQP-GIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLP 1153 Query: 230 PPMGMMGQVNQGNHMMGQRQIPPYRPPQ-----QGPPQQYSG--QEDYYGDQYSHGGQGP 282 P G G+V M G P R PQ +G P G Q G++ G G Sbjct: 1154 GPPGEKGEVGDVGSM-GPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGD 1212 Query: 283 PEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS--SQHYYEGGNSQYGQQQDAYQGPP 340 P P D G + S P P + + +G G D GPP Sbjct: 1213 PGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDL--GPP 1270 Query: 341 PQQGYPPQQQQYPGQQGYPGQQQGYGP-----SQGGPGPQYPNYPQG----QGQQYGGYR 391 G PG++G PG G GP G PGP P G +G++ Sbjct: 1271 GDPGVSGIDGS-PGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGA 1329 Query: 392 PTQPGPPQPP 401 +PGP PP Sbjct: 1330 KGEPGPDGPP 1339 Score = 40.4 bits (93), Expect = 0.003 Identities = 85/365 (23%), Positives = 120/365 (32%), Gaps = 54/365 (14%) Query: 76 PAPP-------TQNMPMGPGGM----NQSGPPPPPRSHNMP-SDGMVGGGPPAPHMQNQM 123 P PP +Q +P GP G+ + GPP P +P SDG +G P + Sbjct: 637 PGPPGQQGNHGSQGLP-GPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGH-PGHEGPTGEK 694 Query: 124 NGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQ 183 Q P + P PGP + T+ + + G G +Q Sbjct: 695 GAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEK-GEKGEDGFPGFKGDVGLKGDQGKPGA 753 Query: 184 GQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMG------- 236 P G GP G ++ + G Y G+ P G +G Sbjct: 754 PGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGP 813 Query: 237 ------QVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGG----------- 279 G + + PP ++G P +GQ GD G Sbjct: 814 IGEKGKSGKTGQPGLEGERGPPGSRGERGQPGA-TGQPGPKGDVGQDGAPGIPGEKGLPG 872 Query: 280 -QGPP-----EGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQ 333 QGPP +G DG + Q+ QG P + +G + G Sbjct: 873 LQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLG 932 Query: 334 DAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG-QGQQYGGYRP 392 + +GPP G PP +Q PG +G G + GP PGP P G +G P Sbjct: 933 E--RGPPGPPG-PPGEQGLPGLEGREGAKGELGP----PGPLGKEGPAGLRGFPGPKGGP 985 Query: 393 TQPGP 397 PGP Sbjct: 986 GDPGP 990 Score = 40.4 bits (93), Expect = 0.003 Identities = 91/367 (24%), Positives = 116/367 (31%), Gaps = 72/367 (19%) Query: 75 LPAPPTQNMP------MGP-GGMNQSGPPPPPRSHNMPSDGMVGG-GPPAPHMQNQMNGQ 126 LP PP + MGP G GP P S P G+ GG G P + G Sbjct: 1152 LPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTP--GLPGGVGQPGAVGEKGERGD 1209 Query: 127 M--PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQG 184 PGP P PGP G +G S PS + P + + Sbjct: 1210 AGDPGPPGAPGI-PGPK----------------GDIGEKGDSGPSGAAGPPGKKGPPGED 1252 Query: 185 QPMGNYGPR-----------PNMS-------MQPNQGPMMHQQPPSQQYNMPQGGGQHYQ 226 G+ GP P +S + + G + PP + G Sbjct: 1253 GAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGAS---GEPGAPGPP 1309 Query: 227 GQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGM 286 G++ P G MG+ + + + P PP + P G G + G GP Sbjct: 1310 GKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEP 1369 Query: 287 NQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYP 346 P G PS G D+ +G G GPP + G Sbjct: 1370 GLLGAPGQMGPPGPLGPS----GLPGLKGDTGPKGEKGHIGLIG-----LIGPPGEAG-E 1419 Query: 347 PQQQQYPGQQGYPGQQQGYGP-----SQGGPGPQYPNYPQGQGQQYGGYRPTQP------ 395 Q PG QG PG + GP S G PGP P GQ G P Sbjct: 1420 KGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGP 1479 Query: 396 -GPPQPP 401 GPP PP Sbjct: 1480 AGPPGPP 1486 Score = 32.7 bits (73), Expect = 0.63 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Query: 350 QQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQP------GPPQPPQQ 403 QQ+ G G PG Q GPS G PGP P +P G P P GPP Sbjct: 388 QQFEGPPGAPGPQGVVGPS-GPPGP--PGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIM 444 Query: 404 RPYGYDQGQY 413 P+ + G + Sbjct: 445 MPFQFAGGSF 454 >gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] Length = 166 Score = 62.8 bits (151), Expect = 6e-10 Identities = 62/145 (42%), Positives = 67/145 (46%), Gaps = 40/145 (27%) Query: 280 QGPPEGMNQQYYP---DGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAY 336 QGPP G QQ P DG+ + G QQ P+QG GQQQ Sbjct: 47 QGPPLG-GQQSQPSAGDGNQNDGPQQGP-PQQG--------------------GQQQ--- 81 Query: 337 QGPPPQQGYPPQQQQYPGQQGYPGQQQG--YGPSQGGPGPQYP-NYPQGQGQQYG---GY 390 QGPPP QG P Q P Q G+P QG GP Q G P+ P PQG QQ G G Sbjct: 82 QGPPPPQGKP---QGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGP 138 Query: 391 RPTQPGPPQ-PPQQ--RPYGYDQGQ 412 P PG PQ PP Q RP G QGQ Sbjct: 139 PPPPPGKPQGPPPQGGRPQGPPQGQ 163 Score = 45.8 bits (107), Expect = 7e-05 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 43/150 (28%) Query: 171 QSMPVQNQMTM-SQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 229 Q P+ Q + S G N GP+ QGP PQ GGQ QG Sbjct: 47 QGPPLGGQQSQPSAGDGNQNDGPQ--------QGP-------------PQQGGQQQQGPP 85 Query: 230 PPMGM-MGQVNQGNH---MMGQRQIPPY-----RPPQ---QGPPQQYSGQEDYYGDQYSH 277 PP G G QG H G+ Q PP RPP+ QGPPQQ Q+ Sbjct: 86 PPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQ--------- 136 Query: 278 GGQGPPEGMNQQYYPDGHNDYGYQQPSYPE 307 G PP G Q P G G Q P+ Sbjct: 137 GPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ 166 Score = 34.7 bits (78), Expect = 0.17 Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 12/71 (16%) Query: 78 PPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQN-----QMNGQMPGPNH 132 PP Q P GP Q G PPPP+ P GG P P Q G GP Sbjct: 85 PPPQGKPQGP--PQQGGHPPPPQGR--PQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPP 140 Query: 133 MP---MQGPGP 140 P QGP P Sbjct: 141 PPPGKPQGPPP 151 Score = 33.1 bits (74), Expect = 0.48 Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 14/112 (12%) Query: 66 DSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQ--- 122 D NQN P Q P G Q PPP + P GG PP P + Q Sbjct: 62 DGNQN------DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQ---GGHPPPPQGRPQGPP 112 Query: 123 MNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHG--SMGGYNHSVPSSQS 172 G P P QGP + P G GG P QS Sbjct: 113 QQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQS 164 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.132 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,683,351 Number of Sequences: 37866 Number of extensions: 1966380 Number of successful extensions: 17397 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 262 Number of HSP's successfully gapped in prelim test: 908 Number of HSP's that attempted gapping in prelim test: 7905 Number of HSP's gapped (non-prelim): 5354 length of query: 418 length of database: 18,247,518 effective HSP length: 105 effective length of query: 313 effective length of database: 14,271,588 effective search space: 4467007044 effective search space used: 4467007044 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.