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Search of human proteins with 55956910
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55956910 meningioma 1 [Homo sapiens]
(1320 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55956910 meningioma 1 [Homo sapiens] 2762 0.0
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 109 2e-23
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 105 3e-22
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 105 3e-22
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 105 3e-22
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 105 4e-22
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 104 6e-22
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 103 1e-21
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 103 1e-21
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 102 3e-21
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 102 3e-21
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 97 1e-19
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 97 1e-19
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 97 1e-19
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 97 1e-19
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 94 7e-19
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens] 94 7e-19
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens] 94 7e-19
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 94 9e-19
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 93 1e-18
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 93 1e-18
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 92 4e-18
gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 91 6e-18
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 91 6e-18
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 91 7e-18
gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens] 91 7e-18
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens] 91 7e-18
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 91 1e-17
gi|55750053 atrophin-1 [Homo sapiens] 89 3e-17
gi|55750041 atrophin-1 [Homo sapiens] 89 3e-17
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 2762 bits (7160), Expect = 0.0
Identities = 1320/1320 (100%), Positives = 1320/1320 (100%)
Query: 1 MFGLDQFEPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPGPVDPAMSALGEPPI 60
MFGLDQFEPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPGPVDPAMSALGEPPI
Sbjct: 1 MFGLDQFEPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPGPVDPAMSALGEPPI 60
Query: 61 LGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGG 120
LGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGG
Sbjct: 61 LGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGG 120
Query: 121 PDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSG 180
PDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSG
Sbjct: 121 PDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSG 180
Query: 181 ASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAP 240
ASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAP
Sbjct: 181 ASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAP 240
Query: 241 SGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQ 300
SGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQ
Sbjct: 241 SGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQ 300
Query: 301 QQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ 360
QQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ
Sbjct: 301 QQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ 360
Query: 361 PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMH 420
PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMH
Sbjct: 361 PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMH 420
Query: 421 PYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNG 480
PYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNG
Sbjct: 421 PYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNG 480
Query: 481 ALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQ 540
ALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQ
Sbjct: 481 ALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQ 540
Query: 541 QQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQ 600
QQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQ
Sbjct: 541 QQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQ 600
Query: 601 PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHD 660
PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHD
Sbjct: 601 PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHD 660
Query: 661 PSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVG 720
PSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVG
Sbjct: 661 PSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVG 720
Query: 721 LPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGG 780
LPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGG
Sbjct: 721 LPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGG 780
Query: 781 GGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLG 840
GGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLG
Sbjct: 781 GGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLG 840
Query: 841 APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900
APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG
Sbjct: 841 APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900
Query: 901 SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD 960
SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD
Sbjct: 901 SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD 960
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD
Sbjct: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
Query: 1021 QPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTG 1080
QPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTG
Sbjct: 1021 QPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTG 1080
Query: 1081 SPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTS 1140
SPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTS
Sbjct: 1081 SPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTS 1140
Query: 1141 SSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELG 1200
SSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELG
Sbjct: 1141 SSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELG 1200
Query: 1201 SCCSEAVKSAMSTIDLDSLMAEHSAAWYMPADKALVDSADDDKTLAPWEKAKPQNPNSKE 1260
SCCSEAVKSAMSTIDLDSLMAEHSAAWYMPADKALVDSADDDKTLAPWEKAKPQNPNSKE
Sbjct: 1201 SCCSEAVKSAMSTIDLDSLMAEHSAAWYMPADKALVDSADDDKTLAPWEKAKPQNPNSKE 1260
Query: 1261 AHDLPANKASASQPGSHLQCLSVHCTDDVGDAKARASVPTWRSLHSDISNRFGTFVAALT 1320
AHDLPANKASASQPGSHLQCLSVHCTDDVGDAKARASVPTWRSLHSDISNRFGTFVAALT
Sbjct: 1261 AHDLPANKASASQPGSHLQCLSVHCTDDVGDAKARASVPTWRSLHSDISNRFGTFVAALT 1320
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 109 bits (272), Expect = 2e-23
Identities = 219/868 (25%), Positives = 285/868 (32%), Gaps = 162/868 (18%)
Query: 339 QPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPS-GGLQDGG 397
QPP PP Q PQ P + P PPG+ R P +P Q G G+P G+ +
Sbjct: 90 QPPTAPTRPPNGQGPQGP--KGDPGPPGIPGRNGD--PGIP-GQPGSPGSPGPPGICESC 144
Query: 398 PMLPSQHAQFEYPIHRLEN----RSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNV 453
P P ++ +Y + +++ + Y P PP P H +P
Sbjct: 145 PTGPQNYSP-QYDSYDVKSGVAVGGLAGYPGPA----GPPGPPGPPGTSGHPGSPGSPGY 199
Query: 454 AKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSF--PSGPP 511
P PG AG G++ S PG PGE P P P+G P
Sbjct: 200 QGPP--GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIP 257
Query: 512 LQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLR 571
H+ RN ++
Sbjct: 258 GFPGMKGHRGFD---------------------------------------GRNGEK--- 275
Query: 572 QPNLAQLGHPGDVGQGGLV----HGGPVGGLAQPNFEREGGSTGA-------GRLGTFEQ 620
+ G PG G+ GL GP+G P G GA G G+ Q
Sbjct: 276 ----GETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQ 331
Query: 621 QAPHLAQESAWFSGPHPPPGDLLPRRMGGS-GLPADCGP-----HDPSLAPPPPPGGSGV 674
P +A F G G++ P GS G P G H + PP PPG +G
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGS 391
Query: 675 LFRGPLQEPMRMPGEGHVPALPSPGLQFG-GSLGGLGQLQSPG--AGVGLPSAASERRPP 731
P +PG +PGL G G G +PG G G P + P
Sbjct: 392 PGGKGEMGPAGIPG--------APGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEP 443
Query: 732 PP--DFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQP 789
P + + + G PG G G+ +P PG N P A G G+ G G P P
Sbjct: 444 GPRGERGEAGIPGVPGAK-GEDGKDGSP-GEPGANGLPGAAGERGAPGFRG-----PAGP 496
Query: 790 DFQPSQRTSASKLGALS----LGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLN 845
+ P ++ A + GA G+ +P +D + G + M S G P +
Sbjct: 497 NGIPGEKGPAGERGAPGPAGPRGAAGEP-GRDGVPG-------GPGMRGMPGSPGGPGSD 548
Query: 846 VTFNKKNPPEGKRKLSQNETDG-AAVAGNPGSDYFPGGT-------------APGAPGPG 891
K PP + + + G + G PG FPG PG PGP
Sbjct: 549 ---GKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ 605
Query: 892 GPSGTSSSGSKASGPPNPPAQ-GDGTSLSPNYTLESTSGNDGKPVSGG-----GGRGRGR 945
GP G + + GPP P GD P G G P +GG G G
Sbjct: 606 GPPGKNGE-TGPQGPPGPTGPGGDKGDTGP----PGPQGLQGLPGTGGPPGENGKPGEPG 660
Query: 946 RKRDSGHVSPGTFFDKYSA-APDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKA 1004
K D+G +PG K A AP G PG++ GA G G+ P
Sbjct: 661 PKGDAG--APGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGP------ 712
Query: 1005 LTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSD 1064
P G L G + G G K D P G +D V
Sbjct: 713 -PGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEP--GGPGADGVPGKDGPRGPTGPIGP 769
Query: 1065 NPQALVKASRSPLVTGSPKLP----PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGG 1120
A + G+P LP PRG GE G PP G P G
Sbjct: 770 PGPAGQPGDKGE--GGAPGLPGIAGPRG-SPGERGETGPPGPAGFPGAPGQNGEPGGKGE 826
Query: 1121 GGGPGHPGTPGLEQVRTPTSSSG-APPP 1147
G PG G G V P SG A PP
Sbjct: 827 RGAPGEKGEGGPPGVAGPPGGSGPAGPP 854
Score = 98.6 bits (244), Expect = 4e-20
Identities = 300/1195 (25%), Positives = 368/1195 (30%), Gaps = 215/1195 (17%)
Query: 42 GGPPGPVDPAMSALGEP-PILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPH-- 98
G P P P + E P N P S + GGL P G G P
Sbjct: 127 GQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYP--GPAGPPGPPGP 184
Query: 99 ---HGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEH 155
GHPGS P + G G P G G +G G PP A G
Sbjct: 185 PGTSGHPGS----PGSPGYQGPPGEP-------------GQAGPSGPPG--PPGAIGPSG 225
Query: 156 MAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSH 215
A G ES P RPG +P P P + P F G+ G D
Sbjct: 226 PAGKDG-ESGRPGRPGE-----------RGLPGP--PGIKGPAGIPGFPGMKGHRGFDGR 271
Query: 216 SLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQ-----LPHYAAGRQVPGG-- 268
+ E G E PGE +G P + G+ LP A R G
Sbjct: 272 NGEKGETGAPGLKG--ENGLPGE--NGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 327
Query: 269 --AFPGASAMPRAAGMVGLSKMHAQP-PQQQPQQQQQPQQQQQQHGVFFERFSGARKMP- 324
PG P AG G + P P P Q+ + + +GA+ P
Sbjct: 328 SDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGP---QGHAGAQGPPG 384
Query: 325 -VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-PPGLLVRQNSCPPAL---- 378
G+ S G + + P P P + PP PGL R + P
Sbjct: 385 PPGINGSPGGKGEM--GPAGIPGAPGLMGARGPPGPAGANGAPGL--RGGAGEPGKNGAK 440
Query: 379 ----PRPQQGEAG---TPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQH 431
PR ++GEAG P +DG P + P E R + P
Sbjct: 441 GEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGE-RGAPGFRGPAGPNGI 499
Query: 432 PPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAY 491
P + +R A P + R PG G+ GS D P
Sbjct: 500 PGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGM---RGMPGSPGGPGSDGKPGP--- 553
Query: 492 PGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
PG GE P P PSGP Q P + + ++ Q
Sbjct: 554 PGSQGESGRPGPPG-PSGPRGQ---PGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609
Query: 552 QNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGG-LVHGGPVGGLAQPNFEREGGST 610
+N G PG G GG GP G GG
Sbjct: 610 KNG-------------------ETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPP 650
Query: 611 GA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGS-GLPADCGPHDP-----SL 663
G G+ G + A + G PG+ P + G+ GL GP P +
Sbjct: 651 GENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAA 710
Query: 664 APPPPPGGSGVLF-------RGPLQEPMRM--------PGEGHVPALPSPGLQFG--GSL 706
PP PPG +G RG L P PG VP P G G
Sbjct: 711 GPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPP 770
Query: 707 GGLGQLQSPGAG--VGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVN 764
G GQ G G GLP A R P T G GFP GA G+ P G G
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGP-PGPAGFP-GAPGQNGEP-GGKGER 827
Query: 765 SPPSAGGGGGSSG----GGGGGGAYPPQPDFQPSQRTSASKLGALSL----GSFNKPSSK 816
P G GG G GG G A PP P +R S GA G P S
Sbjct: 828 GAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSN 887
Query: 817 DNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAV----AG 872
N G P + + K PP + G + AG
Sbjct: 888 GNP--------------------GPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAG 927
Query: 873 NPGSDYFPGGTAP-GAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGND 931
PG PG P GAPGP G +G + + A GPP P G S P + G
Sbjct: 928 QPGEKGSPGAQGPPGAPGPLGIAGITGARGLA-GPPGMP--GPRGSPGP----QGVKGES 980
Query: 932 GKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSA 991
GKP + G RG GT + P G PG S G G+ G
Sbjct: 981 GKPGANGLSGERGPPGPQGLPGLAGT-----AGEPGRDGNPG-SDGLPGRDGSPGGKGDR 1034
Query: 992 GETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVST 1051
GE P P G GD+ + G + +P G S
Sbjct: 1035 GENGSPGAPGAPGHPGPPGPVGPAGKSGDRGE------SGPAGPAGAP--GPAGSRGAPG 1086
Query: 1052 SYANEDEVSSSSDNPQALVKASRS-PLVTGSPKLP-PRG----VGA-------GEHGPKA 1098
+ + + A +K R P G+P P P G +G+ G GP
Sbjct: 1087 PQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSG 1146
Query: 1099 PPPALGLGIMSNSTSTP------DSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
PP G P G G PGHPG PG P GAP P
Sbjct: 1147 PPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPG------PPGPPGAPGP 1195
Score = 97.1 bits (240), Expect = 1e-19
Identities = 163/603 (27%), Positives = 198/603 (32%), Gaps = 126/603 (20%)
Query: 579 GHPGDVGQGGLVHG-GPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHP 637
G PG G+ G GP G QP G G AP E GP P
Sbjct: 552 GPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKG-------NDGAPGKNGERGGPGGPGP 604
Query: 638 --PPGDLLPRRMGGSGLPADCGPHDPS--LAPPPPPGGSGVLFRGPLQEPMRMPGEGHVP 693
PPG G G P GP PP P G G+ G PGE P
Sbjct: 605 QGPPGK--NGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGG------PPGENGKP 656
Query: 694 ALPSPGLQFG--GSLGGLGQLQSPGAG-----VGLPSAASERRPPPPDFATSALGGQPGF 746
P P G G+ GG G +PG G P PP P+ A G P
Sbjct: 657 GEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAG--PPG 714
Query: 747 PFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYP-PQPDFQPSQRTSASKLGAL 805
P GAAG PG+ P GG GS G G G P D P + G +
Sbjct: 715 PPGAAGT-------PGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPI 767
Query: 806 SL-GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNE 864
G +P K G+ GAP L + P G+R
Sbjct: 768 GPPGPAGQPGDK----GEG----------------GAPGLPGIAGPRGSP-GERG-ETGP 805
Query: 865 TDGAAVAGNPGSDYFPGGT----APGAPGPGGPSGTSS--SGSKASGPPNPPAQGDGTSL 918
A G PG + PGG APG G GGP G + GS +GPP P QG
Sbjct: 806 PGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGP--QG----- 858
Query: 919 SPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS--P 976
++ G+ G P + G RG + +PG P G+PG P
Sbjct: 859 -----VKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGP--------PGPSGSPGKDGPP 905
Query: 977 GQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDS 1036
G +GA +G A P EK GA LG I + G A+ +
Sbjct: 906 GPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLG-----IAGITG-ARGLA 959
Query: 1037 SSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGP 1096
P + S PQ + S P G +GE GP
Sbjct: 960 GPPGMPG----------------PRGSPGPQGVKGESGKPGANGL---------SGERGP 994
Query: 1097 KAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP-------PPDE 1149
P GL + + G G PG G+PG + R S GAP PP
Sbjct: 995 PGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGP 1054
Query: 1150 IHP 1152
+ P
Sbjct: 1055 VGP 1057
Score = 72.4 bits (176), Expect = 3e-12
Identities = 252/1055 (23%), Positives = 321/1055 (30%), Gaps = 192/1055 (18%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-----VHGFFG---- 93
G PGP+ P G P G P ARG+ Q P GF G
Sbjct: 294 GAPGPMGPR----GAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGA 349
Query: 94 -GQQPHHGHPGSHH-PHQH-HPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFA 150
G+ G PGS+ P Q P G+ G P G G+ GG G P
Sbjct: 350 KGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPP-------GINGSPGGKGEMGPAG 402
Query: 151 -EGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSS 209
G + ++GP GP P A P + A G+P +
Sbjct: 403 IPGAPGLMGARGPP--GPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGA 460
Query: 210 SGSDSHSLEPRRVTNQGAVDSL-EYNYPG----EAPSGHFDMFSPSDSEGQL----PHYA 260
G D P G + E PG P+G P+ G P A
Sbjct: 461 KGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGA 520
Query: 261 AGRQ----VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQ----PQQQQQQHGV 312
AG VPGG PG MP + G G S PP Q + + P + Q GV
Sbjct: 521 AGEPGRDGVPGG--PGMRGMPGSPGGPG-SDGKPGPPGSQGESGRPGPPGPSGPRGQPGV 577
Query: 313 FFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQN 372
F G P G + + G P P P + + PQ PP P G +
Sbjct: 578 M--GFPG----PKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQG-PPGPTGPGGDKG 630
Query: 373 SCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHP 432
P P+ QG GT ++G P P P + + +
Sbjct: 631 DTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAP------GAPGGKGDAGAPGERG 684
Query: 433 PPQQAPNQRLQHFDAPPYMNVAKRPRFDF--PGSAGVDRCASWNGSMHNGALDNHLSPSA 490
PP A L+ PP K PG+AG G
Sbjct: 685 PPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKG 744
Query: 491 YPGLPGEFTPPVPDSFPSGP--PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQ 548
PG PG P D P GP P+ P P Q + +
Sbjct: 745 EPGGPGADGVPGKDG-PRGPTGPIGPPGP----------------------AGQPGDKGE 781
Query: 549 QQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGG 608
+ S ++ P A G PG GQ G G G P + EGG
Sbjct: 782 GGAPGLPGIAGPRGSPGERGETGPPGPA--GFPGAPGQNG--EPGGKGERGAPGEKGEGG 837
Query: 609 STGA-------------GRLGTFEQQAPHLAQESAWFSG----PHPPPGDLLPRRMGGSG 651
G G G ++ +A F G P PP + P G SG
Sbjct: 838 PPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSG 897
Query: 652 LPADCGPHDPS--LAPPPPPGGSGVLFRGPLQEPMRM--PGEGHVPALPSPGLQFGGSLG 707
P GP P+ P PG SG +G +P PG P P P L G G
Sbjct: 898 SPGKDGPPGPAGNTGAPGSPGVSGP--KGDAGQPGEKGSPGAQGPPGAPGP-LGIAGITG 954
Query: 708 GLGQLQSPGA----------GV----GLPSA---ASERRPPPPDFATSALG--------G 742
G PG GV G P A + ER PP P G G
Sbjct: 955 ARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDG 1014
Query: 743 QPGFPFGAAGRQSTP-------------------HSGP-GVNSPPSAGGGGGSSGGGGGG 782
PG G GR +P H GP G P G G SG G
Sbjct: 1015 NPGSD-GLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPA 1073
Query: 783 GAYPPQ-------PDFQPSQRTSASKLGALSL-------GSFNKPSSKDNLFGQSCLAAL 828
GA P P + + GA + G+ P S Q + +
Sbjct: 1074 GAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSP 1133
Query: 829 STAC-QNMIASLGAPNLNVTFNKKNP-----PEGKRKLSQNETDGA-AVAGNPGSDYFPG 881
A + + G P + T P P G R + ++G+ G PG PG
Sbjct: 1134 GPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNR--GERGSEGSPGHPGQPGPPGPPG 1191
Query: 882 GTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDG------TSLSPNYTLESTSGNDGKPV 935
P G G + G KA G P GD + +L+S +G +
Sbjct: 1192 APGPCCGGVGAAAIAGIGGEKAGG--FAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLI 1249
Query: 936 SGGGGR-GRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
S G R R RD P +Y P+ G
Sbjct: 1250 SPDGSRKNPARNCRDLKFCHPELKSGEYWVDPNQG 1284
Score = 58.2 bits (139), Expect = 5e-08
Identities = 87/348 (25%), Positives = 115/348 (33%), Gaps = 53/348 (15%)
Query: 829 STACQNMIAS---LGAPNLNVTFNK------------KNPPEGKRKLSQNETDGA-AVAG 872
S C ++I L PN + F + PP G+ G + G
Sbjct: 59 SVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPG 118
Query: 873 NPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDG 932
G PG PG+PG GP G S +GP N Q D + + +G G
Sbjct: 119 RNGDPGIPG--QPGSPGSPGPPGICESCP--TGPQNYSPQYDSYDVKSGVAVGGLAGYPG 174
Query: 933 KPVSGGGGRGRGRRKRDSGHV-SPGTFFDKYSAAPDSGGAPGVS--PGQQQASGAAVGGS 989
G G SGH SPG+ Y P G G S PG A G +
Sbjct: 175 P----AGPPGPPGPPGTSGHPGSPGS--PGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAG 228
Query: 990 SAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIG--SLDG--GAKSDSSSPNVGEFA 1045
GE+ P E+ L P KG + G P + G DG G K ++ +P +
Sbjct: 229 KDGESGRPGRPGERGLPGPPGIKGPAGIPGF-PGMKGHRGFDGRNGEKGETGAPGL---- 283
Query: 1046 SDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKA------P 1099
E+ + + P + +P G P LP G G + P
Sbjct: 284 --------KGENGLPGENGAPGPMGPRG-APGERGRPGLPGAAGARGNDGARGSDGQPGP 334
Query: 1100 PPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
P G S G G PG G PG P +GA P
Sbjct: 335 PGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGP 382
Score = 54.3 bits (129), Expect = 8e-07
Identities = 102/447 (22%), Positives = 141/447 (31%), Gaps = 62/447 (13%)
Query: 730 PPPPDFATSALGGQ-PGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQ 788
P PP T GQ P P G G P PG N P G GS G G G
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKGDPG----PPGIPGRNGDPGIPGQPGSPGSPGPPGICESC 144
Query: 789 P----DFQPSQRTSASKLGAL--SLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAP 842
P ++ P + K G L + P+ G + G P
Sbjct: 145 PTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPP-------------GTSGHP 191
Query: 843 NLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSK 902
+ + PP E A +G PG PGA GP GP+G +
Sbjct: 192 GSPGSPGYQGPP--------GEPGQAGPSGPPGP--------PGAIGPSGPAGKDGESGR 235
Query: 903 ASGP-----PNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG--GGRG-RGRRKRDSGHVS 954
P P PP + ++ G DG+ G G G +G + +
Sbjct: 236 PGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGA 295
Query: 955 PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGE--------TRGAP-TPHEKAL 1005
PG + AP G PG+ PG A G S G+ T G P +P K
Sbjct: 296 PGPMGPR--GAPGERGRPGL-PGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGE 352
Query: 1006 TSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSS--SS 1063
P+ G+ G + + GA+ P + + A +
Sbjct: 353 VGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGA 412
Query: 1064 DNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGG 1123
P A+ +P + G P + GE GP+ G+ + + G G
Sbjct: 413 RGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGE 472
Query: 1124 PGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
PG G PG R G P+ I
Sbjct: 473 PGANGLPGAAGERGAPGFRGPAGPNGI 499
Score = 44.3 bits (103), Expect = 8e-04
Identities = 172/673 (25%), Positives = 211/673 (31%), Gaps = 157/673 (23%)
Query: 41 TGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHS----ELHAGGLQAQPVHGFFGGQQ 96
TGGPPG GEP G P +G + E GL P G GG
Sbjct: 646 TGGPPGENGKP----GEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAP--GLRGGAG 699
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPD--PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYE 154
P PG P G GP PGA+ G L G G GGLGS P +
Sbjct: 700 P----PG--------PEGGKGAAGPPGPPGAAGTPG--LQGMPGERGGLGSPGPKGD--- 742
Query: 155 HMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDS 214
E GP + G PG +G PA P D+ A G+ GS
Sbjct: 743 -KGEPGGPGADGV--PGKDGPRGPTGPIGPPGPAG-QPGDKGEGGAPGLPGIAGPRGSPG 798
Query: 215 HSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGAS 274
E G +PG AP + + G+ A G + GG PG +
Sbjct: 799 ERGETGPPGPAG--------FPG-APGQN------GEPGGKGERGAPGEKGEGGP-PGVA 842
Query: 275 AMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSR 334
P +G G P Q ++ G F GAR +P
Sbjct: 843 GPPGGSGPAG-----------PPGPQGVKGERGSPGGPGAAGFPGARGLP---------- 881
Query: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPR---PQQGEAGTPSG 391
PP P P P + PP P G S + P+ Q GE G+P
Sbjct: 882 ----GPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937
Query: 392 -------------------GLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHP 432
GL G P +P ++ S P + + + P
Sbjct: 938 QGPPGAPGPLGIAGITGARGLA-GPPGMPGPRG--SPGPQGVKGESGKPGANGLSGERGP 994
Query: 433 PPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM-HNGALDNHLSPSAY 491
P Q P A P D G+ G D +GS G + SP A
Sbjct: 995 PGPQG---------LPGLAGTAGEPGRD--GNPGSDGLPGRDGSPGGKGDRGENGSPGA- 1042
Query: 492 PGLPGEFTPPVP--------DSFPSGP--PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQ 541
PG PG PP P D SGP P P P + Q
Sbjct: 1043 PGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGP--------------AGSRGAPGPQ 1088
Query: 542 QQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQP 601
+ + + + A IK R N G PG GQ G + G P G A P
Sbjct: 1089 GPRGDKGETGERGAAGIK-------GHRGFPGNPGAPGSPGPAGQQGAI-GSP--GPAGP 1138
Query: 602 NFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGS-GLPADCGPHD 660
G S G+ GT P GP P G+ R GS G P GP
Sbjct: 1139 R-GPVGPSGPPGKDGTSGHPGP---------IGPPGPRGNRGERGSEGSPGHPGQPGPPG 1188
Query: 661 PSLAPPPPPGGSG 673
P AP P GG G
Sbjct: 1189 PPGAPGPCCGGVG 1201
Score = 42.4 bits (98), Expect = 0.003
Identities = 109/404 (26%), Positives = 125/404 (30%), Gaps = 73/404 (18%)
Query: 9 PQVNSRNAGQGERNF-NETGLSMNTHFKAPAFHTGGPPGPVDP-AMSALGEPP----ILG 62
P N G+GER E G GGPPG P S PP + G
Sbjct: 815 PGQNGEPGGKGERGAPGEKG-------------EGGPPGVAGPPGGSGPAGPPGPQGVKG 861
Query: 63 MNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGP- 121
P G A G A GL P G G PG P P GN G P
Sbjct: 862 ERGSPGGPGAAGFPG--ARGLPGPPGSNGNPGPPGPSGSPGKDGP----PGPAGNTGAPG 915
Query: 122 DPGASCLHGGRLLGYGGAAGGLGSQ-PPFAEGYEHMAESQGPESFG--PQRPG--NLPDF 176
PG S G G G G G+Q PP A G +A G P PG P
Sbjct: 916 SPGVSGPKGDA--GQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGP 973
Query: 177 HSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSD-------SHSLEPRRVTNQGAVD 229
S A L ++ P GL ++G S L R + G D
Sbjct: 974 QGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGD 1033
Query: 230 SLEYNYPGE-------APSGHFDMFSPSDSEGQ--------LPHYAAGRQVPGGAFP--- 271
E PG P G S G+ P A R PG P
Sbjct: 1034 RGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGD 1093
Query: 272 -GASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPS 330
G + AAG+ G H P P P QQ + +G R PVG
Sbjct: 1094 KGETGERGAAGIKG----HRGFPGN-PGAPGSPGPAGQQGAIGSPGPAGPRG-PVGPSGP 1147
Query: 331 VGSRHPLMQPPQQAPPPPQ--------QQPPQQPPQQQPPPPPG 366
G P PP P+ + P P Q PP PPG
Sbjct: 1148 PGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPG 1191
Score = 32.0 bits (71), Expect = 4.0
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 1091 AGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP-PPDE 1149
AG GP PP G S +P S G G PG PG G SG P PP
Sbjct: 170 AGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAG---------PSGPPGPPGA 220
Query: 1150 IHP 1152
I P
Sbjct: 221 IGP 223
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 105 bits (262), Expect = 3e-22
Identities = 291/1236 (23%), Positives = 375/1236 (30%), Gaps = 285/1236 (23%)
Query: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGY 153
G++ G PG H P F G G P P G + G G G G PP G+
Sbjct: 45 GEKGERGFPGLEG-HPGLPGFPGPEGPPGPRGQKGDDG-IPGPPGPKGIRG--PPGLPGF 100
Query: 154 EHMAESQG-PESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGS 212
G P G P +P + + +P P Q P G+ GS
Sbjct: 101 PGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGS 160
Query: 213 DSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAF-- 270
S P N G YPG P G + P+ G + G P G
Sbjct: 161 IIMSSLPGPKGNPG--------YPG--PPGIQGLPGPTGIPGPI-----GPPGPPGLMGP 205
Query: 271 PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQP----QQQQQQHGVFFERFSGARKMPVG 326
PG +P G +GL+ + + + Q P Q +Q+ + E G + +P
Sbjct: 206 PGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP-- 263
Query: 327 LEPSVGSRHPLMQPPQQAPPPP----------QQQP------------------------ 352
G R P P + PP P Q +P
Sbjct: 264 -----GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDP 318
Query: 353 --PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLP 401
P +P + PP PPGL++ PRP G G + G P LP
Sbjct: 319 GYPGEPGRDGEKGQKGDTGPPGPPGLVI---------PRPGTGITIGEKGNI--GLPGLP 367
Query: 402 SQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDF 461
+ + +P ++ P M P P P +R Q D P P
Sbjct: 368 GEKGERGFP--GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGP-------PGISI 418
Query: 462 PGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQS 521
PG G+D P A PGLPG P GP H P +
Sbjct: 419 PGPPGLDG-----------------QPGA-PGLPG----------PPGPAGPHIPPSDEI 450
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGH 580
+ + Q +Q + + + Q P LG
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 581 PGDVGQGGLVHG-------GPVGGLAQPNFEREGGSTG-----------AGRLGTFEQQA 622
PG G+ G G G P F G G G LG+ A
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGS--PGA 568
Query: 623 PHL-------AQESA-WFSGPHPPPGDLL-------PRRMGGSGLPADCGPHDP-SLAPP 666
P L Q+ GP PG + P G GLP + GP P PP
Sbjct: 569 PGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPP 628
Query: 667 PPPGGSGVL----------FRGPLQEP---MRMPGEGHVPALPS----------PGLQFG 703
P G G+ GP +P + PG+ +P P PGL
Sbjct: 629 GPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQ 688
Query: 704 GSLGGL-GQLQSPGA-GVGLPSAASERR----PPPPDFATS----ALGGQPGFPFGAAGR 753
L G+ G PG G+GLP + P PP + L G PG P G G
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPP-GFPGP 747
Query: 754 QSTPHSG-PGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNK 812
+ P PG PP G G+ G G G +P P P RT L G
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRG-FPGPPG--PPGRTGLDGLPGPK-GDVG- 802
Query: 813 PSSKDNLFGQSCLAALST----ACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA 868
P+ + G L + + +G P L+ +K P G
Sbjct: 803 PNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG---------PPGL 853
Query: 869 AVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKAS--------------GPPNPPAQGD 914
V G PG PG PGAPGP GP G+ KA GPP PP
Sbjct: 854 DVPGPPGERGSPG--IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLG 911
Query: 915 GTSLSPNYTLESTSGNDGKPVSGG-----GGRGRGRRKRDSGHVSPGTFFDK-YSAAPDS 968
S L+ G G+P G G +G G + P K P
Sbjct: 912 IPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL 971
Query: 969 GGAPGVS-----------PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELL 1017
G PGVS PGQ SG G P + L P KG
Sbjct: 972 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT--- 1028
Query: 1018 LGDQ-------------PDLIGSLDG-----GAKSDSSSPNVGEFA--------SDEVST 1051
+GD P + G G K D P + +
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP 1088
Query: 1052 SYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNS 1111
Y + S +P L +P G P LP G G PP G+ +
Sbjct: 1089 GYPGNPGIKGSVGDP-GLPGLPGTPGAKGQPGLP------GFPGTPGPPGPKGISGPPGN 1141
Query: 1112 TSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
P G GG GHPG PG + G P P
Sbjct: 1142 PGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGP 1177
Score = 98.2 bits (243), Expect = 5e-20
Identities = 237/980 (24%), Positives = 297/980 (30%), Gaps = 190/980 (19%)
Query: 271 PGASAMPRAAGMVGLSKMHAQP-PQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEP 329
PGA +P G G + P P+ +P G+ F+ G P GL
Sbjct: 566 PGAPGLPGLPGTPGQDGLPGLPGPKGEPG------------GITFKGERGPPGNP-GLPG 612
Query: 330 SVGSRHPLMQPPQQAPPPPQQQP--------PQQPPQQQPPPPPGLLVRQNSCPPALPRP 381
G+ P M PP PP P + P QP P PG + Q P P
Sbjct: 613 LPGNIGP-MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNP 671
Query: 382 -QQGEAGTPSG-GL--QDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
+ G+ G P GL Q G P +P + P L P + + PP
Sbjct: 672 GRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGP---PGPKGFPGIPGPPGAPG 728
Query: 438 PNQRLQHFDAPP----YMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPG 493
R+ + PP + P F PG G + G+ L P G
Sbjct: 729 TPGRIG-LEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGA---------LGPKGDRG 778
Query: 494 LPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQN 553
PG PP P L P D
Sbjct: 779 FPG---PPGPPGRTGLDGLPGPKGD----------------------------------- 800
Query: 554 AALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAG 613
+ Q + P L +G G G G+ GP+G E G G
Sbjct: 801 -------VGPNGQPGPMGPPGLPGIGVQGPPGPPGIP--GPIGQPGLHGIPGEKGDPGPP 851
Query: 614 RLGTFEQQAPHLAQESAWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGS 672
L + GP PPG LP + G SG P G + PP PPG
Sbjct: 852 GLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG-MMGPPGPPGPL 910
Query: 673 GVLFRGP---------------LQEPMRMPGEGHVPALPSP-GLQFGGSLGGLGQLQSPG 716
G+ R L P G P LP P G LG G+ PG
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 717 AGVGLPSAASER--RPPPPDFATSALGGQPGFPFGAAGRQSTPH--SGPGVNSPPSAGGG 772
G+P + + + P D L GQPG P G G + P PG+ PP G
Sbjct: 971 LP-GIPGVSGPKGYQGLPGDPGQPGLSGQPGLP-GPPGPKGNPGLPGQPGLIGPPGLKGT 1028
Query: 773 GGSSG--------GGGGGGAYPPQPDFQ--PSQRTSASKLGALSLGSFNKPSSKDNLFGQ 822
G G G G P QP P Q+ G S+G P K G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK----GE 1084
Query: 823 SCLAAL--STACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA-AVAGNPGSDYF 879
L + + + G P L T K P G ++G PG+
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL 1144
Query: 880 PG-------GTAPGAPGPGGPSGTSSS-------------GSKASGPPNPPAQGDGTSLS 919
PG G PG PGP G G G G P PP +
Sbjct: 1145 PGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQK 1204
Query: 920 PNYTLESTSGNDGKPVSGG--GGRG-RGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS- 975
+ L GN G P G G G G + SPG + P G PG
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 976 -------PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIG 1026
PG + G G GE P L +G L G+ +P L
Sbjct: 1265 PTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGL-- 1322
Query: 1027 SLDGGAKSDSSSPNVGEFASDE----VSTSYANEDEVSS-SSDNPQALVKASRSPLV--- 1078
G K D P V F + V S E E P L S ++
Sbjct: 1323 ---NGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKG 1379
Query: 1079 -TGSPKLP----------PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHP 1127
G P +P P+G G GP PP G + G G PG P
Sbjct: 1380 DAGPPGIPGQPGLKGLPGPQGP-QGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1438
Query: 1128 GTPGLEQVRTPTSSSGAPPP 1147
GT GL+ P G P P
Sbjct: 1439 GTRGLDGPPGPDGLQGPPGP 1458
Score = 87.8 bits (216), Expect = 6e-17
Identities = 300/1234 (24%), Positives = 376/1234 (30%), Gaps = 230/1234 (18%)
Query: 43 GPPGPVD-PAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP----VHGFFGGQQP 97
GPPGP P M GEP + M+ P G+ G+Q P + G G P
Sbjct: 144 GPPGPPGIPGMK--GEPGSIIMSSLPGPKGNPGYPG--PPGIQGLPGPTGIPGPIGPPGP 199
Query: 98 HH--GHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQP-----PFA 150
G PG + G NF GP G G L G G G + Q F
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPK-GEKGEQG--LQGPPGPPGQISEQKRPIDVEFQ 256
Query: 151 EGYEHMAESQGPESF-GPQRPGNLPDFHSSGASSHAVPAPC-LPLDQSPNRAASFHGLPS 208
+G + + +GP G + P P P P N GLP
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPG 316
Query: 209 SSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPG- 267
G EP R +G P G + P G +PG
Sbjct: 317 DPGYPG---EPGRDGEKGQKGDT-------GPPGPPGLVIPRPGTGITIGEKGNIGLPGL 366
Query: 268 ------GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGAR 321
FPG P G G + M P P ++ Q + + G+ G
Sbjct: 367 PGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQ-KGDEGPPGISIPGPPGLD 425
Query: 322 KMP--VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ------------------- 360
P GL G P + P + P PP P +
Sbjct: 426 GQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCI 485
Query: 361 ------PPPPPGLLVRQNSCPPALPRP--------QQGEAGTPSGGLQDGGPMLPSQHAQ 406
PP PGL P LP P Q+GE G G P +P
Sbjct: 486 GTGISGPPGQPGL--------PGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGA 537
Query: 407 FEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFD----FP 462
+P + E + + P + L AP + P D P
Sbjct: 538 PGFPGSKGEPGDILTF----------PGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLP 587
Query: 463 GSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSL 522
G G ++ G G N PGLPG P P F GPP Q +
Sbjct: 588 GPKGEPGGITFKGE--RGPPGN----PGLPGLPGNIGPMGPPGF--GPPGPVGEKGIQGV 639
Query: 523 QQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQL-GHP 581
Q + Q Q + N + QP L + G
Sbjct: 640 AGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPG-RDGDVGLPGDPGLPGQPGLPGIPGSK 698
Query: 582 GDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPG 640
G+ G G+ GP G P G+ G GR+G P F GP PG
Sbjct: 699 GEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGP------PGFPGPKGEPG 752
Query: 641 DLLPRRMGGSGLPADCGPHDPS-----LAPPPPPGGSGVL-FRGPLQE--PMRMPGEGHV 692
LP G GLP G P PP PPG +G+ GP + P PG
Sbjct: 753 FALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGP 812
Query: 693 PALPSPGLQFGGSLGGL-GQLQSPGAGVGLPSAASERRPPPPDF-ATSALGGQPGFPFGA 750
P LP G+Q G+ G + PG G+P + PP D G PG P GA
Sbjct: 813 PGLPGIGVQGPPGPPGIPGPIGQPGLH-GIPGEKGDPGPPGLDVPGPPGERGSPGIP-GA 870
Query: 751 AGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSF 810
G P S PG+ A G G+ G G G PP P P + G L
Sbjct: 871 PGPIGPPGS-PGLPGKAGASGFPGTKGEMGMMG--PPGP---PGPLGIPGRSGVPGL--- 921
Query: 811 NKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAV 870
D L GQ L + S G P L P + N
Sbjct: 922 ---KGDDGLQGQPGLPGPT----GEKGSKGEPGL---------PGPPGPMDPNLLGSKGE 965
Query: 871 AGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKASGPP----NPPAQGDGTSLSPNY 922
G PG PG + P G PG G G S GPP NP G + P
Sbjct: 966 KGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPG-LPGPPGPKGNPGLPGQPGLIGPP- 1023
Query: 923 TLESTSGNDGKPVSGG--------------GGRGRGRRKRDSGHVSPGTFFDKYSAAPDS 968
L+ T G+ G P G G G +K D G PG P
Sbjct: 1024 GLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKG--DPGISSIGLPGLPGP 1081
Query: 969 GGAPGVS--PGQQQASGAAVGGSSAGETRGAP----------------TPHEKALTSPSW 1010
G PG+ PG G+ VG G P P K ++ P
Sbjct: 1082 KGEPGLPGYPGNPGIKGS-VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPG 1140
Query: 1011 GKGAELLLGDQPDLIGSLDGGAKSDSSSPNV-GEFASDEVSTSYANEDEVSS---SSDNP 1066
G L +P +G GG P G+ D + + E + P
Sbjct: 1141 NPG----LPGEPGPVGG--GGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP 1194
Query: 1067 QALVKASRS------PLVTGSPKLP-PRGVGA-----GEHGPKAPPPALGLGIMSNSTST 1114
L S P + G+P LP P+G G GP PP + G
Sbjct: 1195 PGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPG---------- 1244
Query: 1115 PDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPD 1148
P G G PG G PG PT G P P+
Sbjct: 1245 PALEGPKGNPGPQGPPGRPG---PTGFQGLPGPE 1275
Score = 76.6 bits (187), Expect = 1e-13
Identities = 154/597 (25%), Positives = 197/597 (32%), Gaps = 122/597 (20%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPP 638
G PG G GL GP G P + E GS L + + P PP
Sbjct: 132 GFPGSPGFPGLQ--GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY----------PGPP 179
Query: 639 PGDLLPRRMGGSGLPADCGPHDPS--LAPPPPPG------GSGVLFRGPLQEPMRMPGEG 690
LP G +G+P GP P + PP PPG G+ F+GP E GE
Sbjct: 180 GIQGLP---GPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK----GEQ 232
Query: 691 HVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGA 750
+ P P Q + ++ GLP +R PP P + G PG P G
Sbjct: 233 GLQGPPGPPGQISEQKRPI-DVEFQKGDQGLPG---DRGPPGPP----GIRGPPGPPGGE 284
Query: 751 AGRQSTPHSGPGVNSPPSAGGGGGSSGGGG--GGGAYPPQP--DFQPSQRTSASKLGALS 806
G + PG P G G G G G YP +P D + Q+ G
Sbjct: 285 KGEKGE-QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPG 343
Query: 807 LGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
L +P + + G+ ++G P L ++ P +
Sbjct: 344 L-VIPRPGTGITI-GEK-------------GNIGLPGLPGEKGERGFPGIQGPPGLPGPP 388
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSK-------ASGPPNPPAQGDGTSLS 919
GAAV G PG FPG G G GP G S G A G P PP G +
Sbjct: 389 GAAVMGPPGPPGFPGER--GQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPA-GPHIP 445
Query: 920 PNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPG 977
P+ + G G P S G G +G K D G S P G PG+ PG
Sbjct: 446 PSDEI-CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGL-PG 503
Query: 978 QQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIGSLDG--GAK 1033
+ G G+ GA P K L GA G +P I + G G K
Sbjct: 504 PPGSLGFPGQKGEKGQA-GATGP--KGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDK 560
Query: 1034 SDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGE 1093
+ SP +P + G P P + G
Sbjct: 561 GELGSPG----------------------------------APGLPGLPGTPGQDGLPGL 586
Query: 1094 HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GPK P + G G PG+PG PGL P G PP +
Sbjct: 587 PGPKGEPGGITFK------------GERGPPGNPGLPGLPGNIGPMGPPGFGPPGPV 631
Score = 50.8 bits (120), Expect = 8e-06
Identities = 90/364 (24%), Positives = 122/364 (33%), Gaps = 69/364 (18%)
Query: 863 NETDGAAVAGNPGSDYFPGGTA----PGAPGPGGPSGTSSSGSKAS----GPPNP----- 909
++ D + + G G FPG PG PGP GP G G K GPP P
Sbjct: 36 SKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPR--GQKGDDGIPGPPGPKGIRG 93
Query: 910 PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
P G +P L G+DG P G G + SPG F P
Sbjct: 94 PPGLPGFPGTPG--LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG--FPGLQGPP--- 146
Query: 970 GAPGVSPGQQQASGAAVGGSSAGETRGAP----------TPHEKALTSPSWGKGAELLLG 1019
G PG+ PG + G+ + S G +G P P + P G L+G
Sbjct: 147 GPPGI-PGMKGEPGSIIMSSLPGP-KGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMG 204
Query: 1020 DQ--PDLIGSLDG------GAKSDSSSPNV-------GEFASDE--VSTSYANEDEVSSS 1062
P L G G K + + G+ + + + + D+
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 1063 SDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
P P + G P P G GE G + P G P G G
Sbjct: 265 DRGPPG------PPGIRGPPG--PPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPG 316
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG--G 1180
PG+PG PG + + +G P P + I +I E +GL G G
Sbjct: 317 DPGYPGEPGRDGEKGQKGDTGPPGPPGL--------VIPRPGTGITIGEKGNIGLPGLPG 368
Query: 1181 KKGE 1184
+KGE
Sbjct: 369 EKGE 372
Score = 46.2 bits (108), Expect = 2e-04
Identities = 162/657 (24%), Positives = 198/657 (30%), Gaps = 167/657 (25%)
Query: 43 GPPGPVDPAM----SALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPH 98
GPPGP+DP + GEP + G+ P +G+ GL P GQ
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGI---PGVSGPKGYQ-----GLPGDP------GQPGL 995
Query: 99 HGHPGSHHPHQHHPHFGGNFGGP-DPGASCLHGGRLLGYGGAAGGLGSQP-PFAEGYEHM 156
G PG P P GN G P PG L+G G G +G P +G E
Sbjct: 996 SGQPGLPGP----PGPKGNPGLPGQPG--------LIGPPGLKGTIGDMGFPGPQGVEGP 1043
Query: 157 AESQGP--ESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDS 214
G + P PG D G SS +P LP + + G P GS
Sbjct: 1044 PGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPG--LPGPKGEPGLPGYPGNPGIKGSVG 1101
Query: 215 HSLEPRRVTNQGAVDSLEY-NYPGE-APSGHFDMFSPSDSEGQL--PHYAAGRQVPGGAF 270
P GA +PG P G + P + G P G PG
Sbjct: 1102 DPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPG 1161
Query: 271 P-GASAMPRAAGMVGLSKMHAQPPQQ---QPQQQQQPQQQQQQHGVFFERFSGARKMPVG 326
P G P G+ G + +P Q P P Q+ G +P
Sbjct: 1162 PPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGP 1221
Query: 327 L-EPSVGSRHPLMQPPQQ--APPPPQQQPPQQPPQQQPPPPPGLLVRQN----SCPPALP 379
EP + PP +P P + P P Q PP PG Q PP LP
Sbjct: 1222 KGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLP 1281
Query: 380 RPQ--QGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
+GE G P Q G P LP Q PP Q
Sbjct: 1282 GNGGIKGEKGNPG---QPGLPGLPGLKGD-----------------------QGPPGLQG 1315
Query: 438 PNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGE 497
R P +N K G G+ + G + P PGL G
Sbjct: 1316 NPGR-------PGLNGMK-------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIG- 1360
Query: 498 FTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALM 557
P GPP P P QS+ + Q
Sbjct: 1361 ---------PPGPP-GLPGPSGQSIIIKGDAGPPGIPGQPG------------------- 1391
Query: 558 IKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGT 617
+K + Q L P G PGD G+ GL P F+ GG G
Sbjct: 1392 LKGLPGPQGPQGLPGPT----GPPGDPGRNGL-----------PGFDGAGGRKG------ 1430
Query: 618 FEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGV 674
PG LP + G GL GP D PP PPG S V
Sbjct: 1431 --------------------DPG--LPGQPGTRGLDGPPGP-DGLQGPPGPPGTSSV 1464
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 105 bits (262), Expect = 3e-22
Identities = 291/1236 (23%), Positives = 375/1236 (30%), Gaps = 285/1236 (23%)
Query: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGY 153
G++ G PG H P F G G P P G + G G G G PP G+
Sbjct: 45 GEKGERGFPGLEG-HPGLPGFPGPEGPPGPRGQKGDDG-IPGPPGPKGIRG--PPGLPGF 100
Query: 154 EHMAESQG-PESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGS 212
G P G P +P + + +P P Q P G+ GS
Sbjct: 101 PGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGS 160
Query: 213 DSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAF-- 270
S P N G YPG P G + P+ G + G P G
Sbjct: 161 IIMSSLPGPKGNPG--------YPG--PPGIQGLPGPTGIPGPI-----GPPGPPGLMGP 205
Query: 271 PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQP----QQQQQQHGVFFERFSGARKMPVG 326
PG +P G +GL+ + + + Q P Q +Q+ + E G + +P
Sbjct: 206 PGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP-- 263
Query: 327 LEPSVGSRHPLMQPPQQAPPPP----------QQQP------------------------ 352
G R P P + PP P Q +P
Sbjct: 264 -----GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDP 318
Query: 353 --PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLP 401
P +P + PP PPGL++ PRP G G + G P LP
Sbjct: 319 GYPGEPGRDGEKGQKGDTGPPGPPGLVI---------PRPGTGITIGEKGNI--GLPGLP 367
Query: 402 SQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDF 461
+ + +P ++ P M P P P +R Q D P P
Sbjct: 368 GEKGERGFP--GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGP-------PGISI 418
Query: 462 PGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQS 521
PG G+D P A PGLPG P GP H P +
Sbjct: 419 PGPPGLDG-----------------QPGA-PGLPG----------PPGPAGPHIPPSDEI 450
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGH 580
+ + Q +Q + + + Q P LG
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 581 PGDVGQGGLVHG-------GPVGGLAQPNFEREGGSTG-----------AGRLGTFEQQA 622
PG G+ G G G P F G G G LG+ A
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGS--PGA 568
Query: 623 PHL-------AQESA-WFSGPHPPPGDLL-------PRRMGGSGLPADCGPHDP-SLAPP 666
P L Q+ GP PG + P G GLP + GP P PP
Sbjct: 569 PGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPP 628
Query: 667 PPPGGSGVL----------FRGPLQEP---MRMPGEGHVPALPS----------PGLQFG 703
P G G+ GP +P + PG+ +P P PGL
Sbjct: 629 GPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQ 688
Query: 704 GSLGGL-GQLQSPGA-GVGLPSAASERR----PPPPDFATS----ALGGQPGFPFGAAGR 753
L G+ G PG G+GLP + P PP + L G PG P G G
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPP-GFPGP 747
Query: 754 QSTPHSG-PGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNK 812
+ P PG PP G G+ G G G +P P P RT L G
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRG-FPGPPG--PPGRTGLDGLPGPK-GDVG- 802
Query: 813 PSSKDNLFGQSCLAALST----ACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA 868
P+ + G L + + +G P L+ +K P G
Sbjct: 803 PNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG---------PPGL 853
Query: 869 AVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKAS--------------GPPNPPAQGD 914
V G PG PG PGAPGP GP G+ KA GPP PP
Sbjct: 854 DVPGPPGERGSPG--IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLG 911
Query: 915 GTSLSPNYTLESTSGNDGKPVSGG-----GGRGRGRRKRDSGHVSPGTFFDK-YSAAPDS 968
S L+ G G+P G G +G G + P K P
Sbjct: 912 IPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL 971
Query: 969 GGAPGVS-----------PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELL 1017
G PGVS PGQ SG G P + L P KG
Sbjct: 972 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT--- 1028
Query: 1018 LGDQ-------------PDLIGSLDG-----GAKSDSSSPNVGEFA--------SDEVST 1051
+GD P + G G K D P + +
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP 1088
Query: 1052 SYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNS 1111
Y + S +P L +P G P LP G G PP G+ +
Sbjct: 1089 GYPGNPGIKGSVGDP-GLPGLPGTPGAKGQPGLP------GFPGTPGPPGPKGISGPPGN 1141
Query: 1112 TSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
P G GG GHPG PG + G P P
Sbjct: 1142 PGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGP 1177
Score = 100 bits (249), Expect = 9e-21
Identities = 237/974 (24%), Positives = 297/974 (30%), Gaps = 184/974 (18%)
Query: 271 PGASAMPRAAGMVGLSKMHAQP-PQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEP 329
PGA +P G G + P P+ +P G+ F+ G P GL
Sbjct: 566 PGAPGLPGLPGTPGQDGLPGLPGPKGEPG------------GITFKGERGPPGNP-GLPG 612
Query: 330 SVGSRHPLMQPPQQAPPPPQQQP--------PQQPPQQQPPPPPGLLVRQNSCPPALPRP 381
G+ P M PP PP P + P QP P PG + Q P P
Sbjct: 613 LPGNIGP-MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNP 671
Query: 382 -QQGEAGTPSG-GL--QDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
+ G+ G P GL Q G P +P + P L P + + PP
Sbjct: 672 GRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGP---PGPKGFPGIPGPPGAPG 728
Query: 438 PNQRLQHFDAPP----YMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPG 493
R+ + PP + P F PG G + G+ L P G
Sbjct: 729 TPGRIG-LEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGA---------LGPKGDRG 778
Query: 494 LPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQN 553
PG PP P L P D
Sbjct: 779 FPG---PPGPPGRTGLDGLPGPKGD----------------------------------- 800
Query: 554 AALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAG 613
+ Q + P L +G G G G+ GP+G E G G
Sbjct: 801 -------VGPNGQPGPMGPPGLPGIGVQGPPGPPGIP--GPIGQPGLHGIPGEKGDPGPP 851
Query: 614 RLGTFEQQAPHLAQESAWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGS 672
L + GP PPG LP + G SG P G + PP PPG
Sbjct: 852 GLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG-MMGPPGPPGPL 910
Query: 673 GVLFRGP---------------LQEPMRMPGEGHVPALPSP-GLQFGGSLGGLGQLQSPG 716
G+ R L P G P LP P G LG G+ PG
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 717 AGVGLPSAASER--RPPPPDFATSALGGQPGFPFGAAGRQSTPH--SGPGVNSPPSAGGG 772
G+P + + + P D L GQPG P G G + P PG+ PP G
Sbjct: 971 LP-GIPGVSGPKGYQGLPGDPGQPGLSGQPGLP-GPPGPKGNPGLPGQPGLIGPPGLKGT 1028
Query: 773 GGSSG--------GGGGGGAYPPQPDFQ--PSQRTSASKLGALSLGSFNKPSSKDNLFGQ 822
G G G G P QP P Q+ G S+G P K G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK----GE 1084
Query: 823 SCLAAL--STACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA-AVAGNPGSDYF 879
L + + + G P L T K P G ++G PG+
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL 1144
Query: 880 PG-------GTAPGAPGPGGPSGTSSS-------------GSKASGPPNPPAQGDGTSLS 919
PG G PG PGP G G G G P PP +
Sbjct: 1145 PGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQK 1204
Query: 920 PNYTLESTSGNDGKPVSGG--GGRG-RGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS- 975
+ L GN G P G G G G + SPG + P G PG
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 976 -PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIGSLDGGA 1032
PG + G G GE P L +G L G+ +P L G
Sbjct: 1265 LPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGL-----NGM 1319
Query: 1033 KSDSSSPNVGEFASDE----VSTSYANEDEVSS-SSDNPQALVKASRSPLV----TGSPK 1083
K D P V F + V S E E P L S ++ G P
Sbjct: 1320 KGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPG 1379
Query: 1084 LP----------PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLE 1133
+P P+G G GP PP G + G G PG PGT GL+
Sbjct: 1380 IPGQPGLKGLPGPQGP-QGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLD 1438
Query: 1134 QVRTPTSSSGAPPP 1147
P G P P
Sbjct: 1439 GPPGPDGLQGPPGP 1452
Score = 76.6 bits (187), Expect = 1e-13
Identities = 154/597 (25%), Positives = 197/597 (32%), Gaps = 122/597 (20%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPP 638
G PG G GL GP G P + E GS L + + P PP
Sbjct: 132 GFPGSPGFPGLQ--GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY----------PGPP 179
Query: 639 PGDLLPRRMGGSGLPADCGPHDPS--LAPPPPPG------GSGVLFRGPLQEPMRMPGEG 690
LP G +G+P GP P + PP PPG G+ F+GP E GE
Sbjct: 180 GIQGLP---GPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK----GEQ 232
Query: 691 HVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGA 750
+ P P Q + ++ GLP +R PP P + G PG P G
Sbjct: 233 GLQGPPGPPGQISEQKRPI-DVEFQKGDQGLPG---DRGPPGPP----GIRGPPGPPGGE 284
Query: 751 AGRQSTPHSGPGVNSPPSAGGGGGSSGGGG--GGGAYPPQP--DFQPSQRTSASKLGALS 806
G + PG P G G G G G YP +P D + Q+ G
Sbjct: 285 KGEKGE-QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPG 343
Query: 807 LGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
L +P + + G+ ++G P L ++ P +
Sbjct: 344 L-VIPRPGTGITI-GEK-------------GNIGLPGLPGEKGERGFPGIQGPPGLPGPP 388
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSK-------ASGPPNPPAQGDGTSLS 919
GAAV G PG FPG G G GP G S G A G P PP G +
Sbjct: 389 GAAVMGPPGPPGFPGER--GQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPA-GPHIP 445
Query: 920 PNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPG 977
P+ + G G P S G G +G K D G S P G PG+ PG
Sbjct: 446 PSDEI-CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGL-PG 503
Query: 978 QQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIGSLDG--GAK 1033
+ G G+ GA P K L GA G +P I + G G K
Sbjct: 504 PPGSLGFPGQKGEKGQA-GATGP--KGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDK 560
Query: 1034 SDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGE 1093
+ SP +P + G P P + G
Sbjct: 561 GELGSPG----------------------------------APGLPGLPGTPGQDGLPGL 586
Query: 1094 HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GPK P + G G PG+PG PGL P G PP +
Sbjct: 587 PGPKGEPGGITFK------------GERGPPGNPGLPGLPGNIGPMGPPGFGPPGPV 631
Score = 50.8 bits (120), Expect = 8e-06
Identities = 90/364 (24%), Positives = 122/364 (33%), Gaps = 69/364 (18%)
Query: 863 NETDGAAVAGNPGSDYFPGGTA----PGAPGPGGPSGTSSSGSKAS----GPPNP----- 909
++ D + + G G FPG PG PGP GP G G K GPP P
Sbjct: 36 SKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPR--GQKGDDGIPGPPGPKGIRG 93
Query: 910 PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
P G +P L G+DG P G G + SPG F P
Sbjct: 94 PPGLPGFPGTPG--LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG--FPGLQGPP--- 146
Query: 970 GAPGVSPGQQQASGAAVGGSSAGETRGAP----------TPHEKALTSPSWGKGAELLLG 1019
G PG+ PG + G+ + S G +G P P + P G L+G
Sbjct: 147 GPPGI-PGMKGEPGSIIMSSLPGP-KGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMG 204
Query: 1020 DQ--PDLIGSLDG------GAKSDSSSPNV-------GEFASDE--VSTSYANEDEVSSS 1062
P L G G K + + G+ + + + + D+
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 1063 SDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
P P + G P P G GE G + P G P G G
Sbjct: 265 DRGPPG------PPGIRGPPG--PPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPG 316
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG--G 1180
PG+PG PG + + +G P P + I +I E +GL G G
Sbjct: 317 DPGYPGEPGRDGEKGQKGDTGPPGPPGL--------VIPRPGTGITIGEKGNIGLPGLPG 368
Query: 1181 KKGE 1184
+KGE
Sbjct: 369 EKGE 372
Score = 49.3 bits (116), Expect = 2e-05
Identities = 162/653 (24%), Positives = 199/653 (30%), Gaps = 165/653 (25%)
Query: 43 GPPGPVDPAM----SALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPH 98
GPPGP+DP + GEP + G+ P +G+ GL P GQ
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGI---PGVSGPKGYQ-----GLPGDP------GQPGL 995
Query: 99 HGHPGSHHPHQHHPHFGGNFGGP-DPGASCLHGGRLLGYGGAAGGLGSQP-PFAEGYEHM 156
G PG P P GN G P PG L+G G G +G P +G E
Sbjct: 996 SGQPGLPGP----PGPKGNPGLPGQPG--------LIGPPGLKGTIGDMGFPGPQGVEGP 1043
Query: 157 AESQGP--ESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDS 214
G + P PG D G SS +P LP + + G P GS
Sbjct: 1044 PGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPG--LPGPKGEPGLPGYPGNPGIKGSVG 1101
Query: 215 HSLEPRRVTNQGAVDSLEY-NYPGE-APSGHFDMFSPSDSEGQL--PHYAAGRQVPGGAF 270
P GA +PG P G + P + G P G PG
Sbjct: 1102 DPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPG 1161
Query: 271 P-GASAMPRAAGMVGLSKMHAQPPQQ---QPQQQQQPQQQQQQHGVFFERFSGARKMPVG 326
P G P G+ G + +P Q P P Q+ G +P
Sbjct: 1162 PPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGP 1221
Query: 327 L-EPSVGSRHPLMQPPQQ--APPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQ- 382
EP + PP +P P + P P Q PP PGL + PP LP
Sbjct: 1222 KGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEG--PPGLPGNGG 1279
Query: 383 -QGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQR 441
+GE G P Q G P LP Q PP Q R
Sbjct: 1280 IKGEKGNPG---QPGLPGLPGLKGD-----------------------QGPPGLQGNPGR 1313
Query: 442 LQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPP 501
P +N K G G+ + G + P PGL G
Sbjct: 1314 -------PGLNGMK-------GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIG----- 1354
Query: 502 VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQM 561
P GPP P P QS+ + Q +K +
Sbjct: 1355 -----PPGPP-GLPGPSGQSIIIKGDAGPPGIPGQPG-------------------LKGL 1389
Query: 562 ASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQ 621
Q L P G PGD G+ GL P F+ GG G
Sbjct: 1390 PGPQGPQGLPGPT----GPPGDPGRNGL-----------PGFDGAGGRKG---------- 1424
Query: 622 APHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGV 674
PG LP + G GL GP D PP PPG S V
Sbjct: 1425 ----------------DPG--LPGQPGTRGLDGPPGP-DGLQGPPGPPGTSSV 1458
Score = 47.0 bits (110), Expect = 1e-04
Identities = 115/472 (24%), Positives = 145/472 (30%), Gaps = 97/472 (20%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHP 102
GPPGP P + G + G+ + GLQ QP G++ G P
Sbjct: 902 GPPGPPGP-LGIPGRSGVPGLKGDD--------------GLQGQPGLPGPTGEKGSKGEP 946
Query: 103 G-SHHPHQHHPHFGGNFGGPD----PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMA 157
G P P+ G+ G PG + G + GY G G G P G +
Sbjct: 947 GLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPK--GYQGLPGDPGQ--PGLSGQPGLP 1002
Query: 158 ESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSL 217
GP+ P PG P + P Q G+P GS
Sbjct: 1003 GPPGPKG-NPGLPGQ-PGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGL-- 1058
Query: 218 EPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGA----FPG 272
P + ++G PG P G E LP Y + G PG
Sbjct: 1059 -PGQKGDKGDPGISSIGLPGLPGPKG----------EPGLPGYPGNPGIKGSVGDPGLPG 1107
Query: 273 ASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVG 332
P A G GL P P+ P G +P P G
Sbjct: 1108 LPGTPGAKGQPGLPGFPGTPGPPGPKGISGPP--------------GNPGLPGEPGPVGG 1153
Query: 333 SRHPLMQ-PPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALP--RPQQGEAGTP 389
HP PP + P Q P Q+ P PG N PP LP Q+G+ G P
Sbjct: 1154 GGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF---GNPGPPGLPGLSGQKGDGGLP 1210
Query: 390 SGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVF----SMQHPP-PQQAPNQRLQH 444
G P LP P EP F +Q PP P +P L+
Sbjct: 1211 G---IPGNPGLPG------------------PKGEPGFHGFPGVQGPPGPPGSPGPALE- 1248
Query: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG 496
P + P PG G+ G NG + PGLPG
Sbjct: 1249 --GPKGNPGPQGP----PGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPG 1294
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 105 bits (262), Expect = 3e-22
Identities = 291/1236 (23%), Positives = 375/1236 (30%), Gaps = 285/1236 (23%)
Query: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGY 153
G++ G PG H P F G G P P G + G G G G PP G+
Sbjct: 45 GEKGERGFPGLEG-HPGLPGFPGPEGPPGPRGQKGDDG-IPGPPGPKGIRG--PPGLPGF 100
Query: 154 EHMAESQG-PESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGS 212
G P G P +P + + +P P Q P G+ GS
Sbjct: 101 PGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGS 160
Query: 213 DSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAF-- 270
S P N G YPG P G + P+ G + G P G
Sbjct: 161 IIMSSLPGPKGNPG--------YPG--PPGIQGLPGPTGIPGPI-----GPPGPPGLMGP 205
Query: 271 PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQP----QQQQQQHGVFFERFSGARKMPVG 326
PG +P G +GL+ + + + Q P Q +Q+ + E G + +P
Sbjct: 206 PGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP-- 263
Query: 327 LEPSVGSRHPLMQPPQQAPPPP----------QQQP------------------------ 352
G R P P + PP P Q +P
Sbjct: 264 -----GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDP 318
Query: 353 --PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLP 401
P +P + PP PPGL++ PRP G G + G P LP
Sbjct: 319 GYPGEPGRDGEKGQKGDTGPPGPPGLVI---------PRPGTGITIGEKGNI--GLPGLP 367
Query: 402 SQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDF 461
+ + +P ++ P M P P P +R Q D P P
Sbjct: 368 GEKGERGFP--GIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGP-------PGISI 418
Query: 462 PGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQS 521
PG G+D P A PGLPG P GP H P +
Sbjct: 419 PGPPGLDG-----------------QPGA-PGLPG----------PPGPAGPHIPPSDEI 450
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGH 580
+ + Q +Q + + + Q P LG
Sbjct: 451 CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGF 510
Query: 581 PGDVGQGGLVHG-------GPVGGLAQPNFEREGGSTG-----------AGRLGTFEQQA 622
PG G+ G G G P F G G G LG+ A
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGS--PGA 568
Query: 623 PHL-------AQESA-WFSGPHPPPGDLL-------PRRMGGSGLPADCGPHDP-SLAPP 666
P L Q+ GP PG + P G GLP + GP P PP
Sbjct: 569 PGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPP 628
Query: 667 PPPGGSGVL----------FRGPLQEP---MRMPGEGHVPALPS----------PGLQFG 703
P G G+ GP +P + PG+ +P P PGL
Sbjct: 629 GPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQ 688
Query: 704 GSLGGL-GQLQSPGA-GVGLPSAASERR----PPPPDFATS----ALGGQPGFPFGAAGR 753
L G+ G PG G+GLP + P PP + L G PG P G G
Sbjct: 689 PGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPP-GFPGP 747
Query: 754 QSTPHSG-PGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNK 812
+ P PG PP G G+ G G G +P P P RT L G
Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRG-FPGPPG--PPGRTGLDGLPGPK-GDVG- 802
Query: 813 PSSKDNLFGQSCLAALST----ACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA 868
P+ + G L + + +G P L+ +K P G
Sbjct: 803 PNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG---------PPGL 853
Query: 869 AVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKAS--------------GPPNPPAQGD 914
V G PG PG PGAPGP GP G+ KA GPP PP
Sbjct: 854 DVPGPPGERGSPG--IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLG 911
Query: 915 GTSLSPNYTLESTSGNDGKPVSGG-----GGRGRGRRKRDSGHVSPGTFFDK-YSAAPDS 968
S L+ G G+P G G +G G + P K P
Sbjct: 912 IPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGL 971
Query: 969 GGAPGVS-----------PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELL 1017
G PGVS PGQ SG G P + L P KG
Sbjct: 972 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT--- 1028
Query: 1018 LGDQ-------------PDLIGSLDG-----GAKSDSSSPNVGEFA--------SDEVST 1051
+GD P + G G K D P + +
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLP 1088
Query: 1052 SYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNS 1111
Y + S +P L +P G P LP G G PP G+ +
Sbjct: 1089 GYPGNPGIKGSVGDP-GLPGLPGTPGAKGQPGLP------GFPGTPGPPGPKGISGPPGN 1141
Query: 1112 TSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
P G GG GHPG PG + G P P
Sbjct: 1142 PGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGP 1177
Score = 99.4 bits (246), Expect = 2e-20
Identities = 237/977 (24%), Positives = 297/977 (30%), Gaps = 187/977 (19%)
Query: 271 PGASAMPRAAGMVGLSKMHAQP-PQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEP 329
PGA +P G G + P P+ +P G+ F+ G P GL
Sbjct: 566 PGAPGLPGLPGTPGQDGLPGLPGPKGEPG------------GITFKGERGPPGNP-GLPG 612
Query: 330 SVGSRHPLMQPPQQAPPPPQQQP--------PQQPPQQQPPPPPGLLVRQNSCPPALPRP 381
G+ P M PP PP P + P QP P PG + Q P P
Sbjct: 613 LPGNIGP-MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNP 671
Query: 382 -QQGEAGTPSG-GL--QDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
+ G+ G P GL Q G P +P + P L P + + PP
Sbjct: 672 GRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGP---PGPKGFPGIPGPPGAPG 728
Query: 438 PNQRLQHFDAPP----YMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPG 493
R+ + PP + P F PG G + G+ L P G
Sbjct: 729 TPGRIG-LEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGA---------LGPKGDRG 778
Query: 494 LPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQN 553
PG PP P L P D
Sbjct: 779 FPG---PPGPPGRTGLDGLPGPKGD----------------------------------- 800
Query: 554 AALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAG 613
+ Q + P L +G G G G+ GP+G E G G
Sbjct: 801 -------VGPNGQPGPMGPPGLPGIGVQGPPGPPGIP--GPIGQPGLHGIPGEKGDPGPP 851
Query: 614 RLGTFEQQAPHLAQESAWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGS 672
L + GP PPG LP + G SG P G + PP PPG
Sbjct: 852 GLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMG-MMGPPGPPGPL 910
Query: 673 GVLFRGP---------------LQEPMRMPGEGHVPALPSP-GLQFGGSLGGLGQLQSPG 716
G+ R L P G P LP P G LG G+ PG
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 717 AGVGLPSAASER--RPPPPDFATSALGGQPGFPFGAAGRQSTPH--SGPGVNSPPSAGGG 772
G+P + + + P D L GQPG P G G + P PG+ PP G
Sbjct: 971 LP-GIPGVSGPKGYQGLPGDPGQPGLSGQPGLP-GPPGPKGNPGLPGQPGLIGPPGLKGT 1028
Query: 773 GGSSG--------GGGGGGAYPPQPDFQ--PSQRTSASKLGALSLGSFNKPSSKDNLFGQ 822
G G G G P QP P Q+ G S+G P K G+
Sbjct: 1029 IGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK----GE 1084
Query: 823 SCLAAL--STACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA-AVAGNPGSDYF 879
L + + + G P L T K P G ++G PG+
Sbjct: 1085 PGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL 1144
Query: 880 PG-------GTAPGAPGPGGPSGTSSS-------------GSKASGPPNPPAQGDGTSLS 919
PG G PG PGP G G G G P PP +
Sbjct: 1145 PGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQK 1204
Query: 920 PNYTLESTSGNDGKPVSGG--GGRG-RGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS- 975
+ L GN G P G G G G + SPG + P G PG
Sbjct: 1205 GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPG 1264
Query: 976 ----PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIGSLD 1029
PG + G G GE P L +G L G+ +P L
Sbjct: 1265 FQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGL----- 1319
Query: 1030 GGAKSDSSSPNVGEFASDE----VSTSYANEDEVSS-SSDNPQALVKASRSPLV----TG 1080
G K D P V F + V S E E P L S ++ G
Sbjct: 1320 NGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAG 1379
Query: 1081 SPKLP----------PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTP 1130
P +P P+G G GP PP G + G G PG PGT
Sbjct: 1380 PPGIPGQPGLKGLPGPQGP-QGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTR 1438
Query: 1131 GLEQVRTPTSSSGAPPP 1147
GL+ P G P P
Sbjct: 1439 GLDGPPGPDGLQGPPGP 1455
Score = 76.6 bits (187), Expect = 1e-13
Identities = 154/597 (25%), Positives = 197/597 (32%), Gaps = 122/597 (20%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPP 638
G PG G GL GP G P + E GS L + + P PP
Sbjct: 132 GFPGSPGFPGLQ--GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY----------PGPP 179
Query: 639 PGDLLPRRMGGSGLPADCGPHDPS--LAPPPPPG------GSGVLFRGPLQEPMRMPGEG 690
LP G +G+P GP P + PP PPG G+ F+GP E GE
Sbjct: 180 GIQGLP---GPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK----GEQ 232
Query: 691 HVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGA 750
+ P P Q + ++ GLP +R PP P + G PG P G
Sbjct: 233 GLQGPPGPPGQISEQKRPI-DVEFQKGDQGLPG---DRGPPGPP----GIRGPPGPPGGE 284
Query: 751 AGRQSTPHSGPGVNSPPSAGGGGGSSGGGG--GGGAYPPQP--DFQPSQRTSASKLGALS 806
G + PG P G G G G G YP +P D + Q+ G
Sbjct: 285 KGEKGE-QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPG 343
Query: 807 LGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
L +P + + G+ ++G P L ++ P +
Sbjct: 344 L-VIPRPGTGITI-GEK-------------GNIGLPGLPGEKGERGFPGIQGPPGLPGPP 388
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSK-------ASGPPNPPAQGDGTSLS 919
GAAV G PG FPG G G GP G S G A G P PP G +
Sbjct: 389 GAAVMGPPGPPGFPGER--GQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPA-GPHIP 445
Query: 920 PNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPG 977
P+ + G G P S G G +G K D G S P G PG+ PG
Sbjct: 446 PSDEI-CEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGL-PG 503
Query: 978 QQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD--QPDLIGSLDG--GAK 1033
+ G G+ GA P K L GA G +P I + G G K
Sbjct: 504 PPGSLGFPGQKGEKGQA-GATGP--KGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDK 560
Query: 1034 SDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGE 1093
+ SP +P + G P P + G
Sbjct: 561 GELGSPG----------------------------------APGLPGLPGTPGQDGLPGL 586
Query: 1094 HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GPK P + G G PG+PG PGL P G PP +
Sbjct: 587 PGPKGEPGGITFK------------GERGPPGNPGLPGLPGNIGPMGPPGFGPPGPV 631
Score = 50.8 bits (120), Expect = 8e-06
Identities = 90/364 (24%), Positives = 122/364 (33%), Gaps = 69/364 (18%)
Query: 863 NETDGAAVAGNPGSDYFPGGTA----PGAPGPGGPSGTSSSGSKAS----GPPNP----- 909
++ D + + G G FPG PG PGP GP G G K GPP P
Sbjct: 36 SKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPR--GQKGDDGIPGPPGPKGIRG 93
Query: 910 PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
P G +P L G+DG P G G + SPG F P
Sbjct: 94 PPGLPGFPGTPG--LPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPG--FPGLQGPP--- 146
Query: 970 GAPGVSPGQQQASGAAVGGSSAGETRGAP----------TPHEKALTSPSWGKGAELLLG 1019
G PG+ PG + G+ + S G +G P P + P G L+G
Sbjct: 147 GPPGI-PGMKGEPGSIIMSSLPGP-KGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMG 204
Query: 1020 DQ--PDLIGSLDG------GAKSDSSSPNV-------GEFASDE--VSTSYANEDEVSSS 1062
P L G G K + + G+ + + + + D+
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 1063 SDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
P P + G P P G GE G + P G P G G
Sbjct: 265 DRGPPG------PPGIRGPPG--PPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPG 316
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG--G 1180
PG+PG PG + + +G P P + I +I E +GL G G
Sbjct: 317 DPGYPGEPGRDGEKGQKGDTGPPGPPGL--------VIPRPGTGITIGEKGNIGLPGLPG 368
Query: 1181 KKGE 1184
+KGE
Sbjct: 369 EKGE 372
Score = 49.3 bits (116), Expect = 2e-05
Identities = 163/666 (24%), Positives = 208/666 (31%), Gaps = 188/666 (28%)
Query: 43 GPPGPVDP-AMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGH 101
GPPGP+DP + + GE G+ P +G+ GL P GQ G
Sbjct: 950 GPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQ-----GLPGDPGQPGLSGQPGLPGP 1004
Query: 102 PGSHHPHQHHPHFGGNFG--GPDPGASCLHGGRLLGYGGAAG--------GLGSQP--PF 149
PG + +P G G GP PG G +G+ G G G+ QP P
Sbjct: 1005 PGP----KGNPGLPGQPGLIGP-PGLKGTIGD--MGFPGPQGVEGPPGPSGVPGQPGSPG 1057
Query: 150 AEGYEHMAESQGPESFG-PQRPG-----NLPDFHSSGASSHAVPAPCLPLDQSPNRAASF 203
G + G S G P PG LP + + +V P LP A
Sbjct: 1058 LPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQ 1117
Query: 204 HGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGE----APSGHFDMFSPSDSEGQ---- 255
GLP G+ P+ ++ L PGE GH P +G+
Sbjct: 1118 PGLPGFPGTPGPP-GPKGISGPPGNPGL----PGEPGPVGGGGHPGQPGPPGEKGKPGQD 1172
Query: 256 -LPHYAAGRQVPGG---AFPGASAMPRAAGMVGLSKMHAQPPQQ-QPQQQQQPQQQQQQH 310
+P A + PG PG +P +G G + P P + +P
Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPG------ 1226
Query: 311 GVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVR 370
F F G + P GS P ++ P+ P P Q PP +P Q P P G
Sbjct: 1227 ---FHGFPGVQGPP----GPPGSPGPALEGPKGNPGP--QGPPGRPGFQGLPGPEG---- 1273
Query: 371 QNSCPPALPRPQ--QGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFS 428
PP LP +GE G P Q G P LP
Sbjct: 1274 ----PPGLPGNGGIKGEKGNPG---QPGLPGLPGLKGD---------------------- 1304
Query: 429 MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP 488
Q PP Q R P +N K G G+ + G + P
Sbjct: 1305 -QGPPGLQGNPGR-------PGLNGMK-------GDPGLPGVPGFPGMKGPSGVPGSAGP 1349
Query: 489 SAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQ 548
PGL G P GPP P P QS+ + Q
Sbjct: 1350 EGEPGLIG----------PPGPP-GLPGPSGQSIIIKGDAGPPGIPGQPG---------- 1388
Query: 549 QQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGG 608
+K + Q L P G PGD G+ GL P F+ GG
Sbjct: 1389 ---------LKGLPGPQGPQGLPGPT----GPPGDPGRNGL-----------PGFDGAGG 1424
Query: 609 STGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPP 668
G PG LP + G GL GP D PP P
Sbjct: 1425 RKG--------------------------DPG--LPGQPGTRGLDGPPGP-DGLQGPPGP 1455
Query: 669 PGGSGV 674
PG S V
Sbjct: 1456 PGTSSV 1461
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 105 bits (261), Expect = 4e-22
Identities = 241/1019 (23%), Positives = 332/1019 (32%), Gaps = 237/1019 (23%)
Query: 44 PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88
PPGP P +S G+ PP +G EP G H L A G Q PV
Sbjct: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
Query: 89 ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144
+ ++G P G PG + P F + G PG +H AAG G
Sbjct: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
Query: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204
S P +E SQ G RPG G +
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
Query: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264
G + G+ + ++ A G + +G+ + SP RQ
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
Query: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
GG G P G LSK A F+RF+G + P
Sbjct: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
Query: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384
G P++ L+ P P + P P PP PP+ P+ Q
Sbjct: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
Query: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444
AG +GG Q M + +Y + S P S P P +Q
Sbjct: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
Query: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501
+P V KRP+ GS + H P S YPG G + PP
Sbjct: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
Query: 502 VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQ------QQQQQQQQQQQQQRQNAA 555
P +P G +Q P + Q QQQ Q QQ QQ QQ QQ Q +
Sbjct: 496 GPQRYPIG--IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP 553
Query: 556 LMIKQMASRNQQQRLRQPNLAQLGH---------PGDVGQ-----------------GGL 589
+ + S++QQ+ Q +++Q G+ PG G
Sbjct: 554 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS 613
Query: 590 VHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS----GPHPPP-GDLL 643
+ P G A + GST + + Q+P S S GP P P G +
Sbjct: 614 IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 673
Query: 644 PRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QEPMRMPGEGHVPAL- 695
SG P S PP PPG L + P+ QE M G P +
Sbjct: 674 GSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 732
Query: 696 --------------PSPGLQFGGSL-------------------GGLGQLQSPGAGVGLP 722
PSPG Q + G G P A G+P
Sbjct: 733 QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVP 792
Query: 723 SAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQSTPHSGPGVNSPPSAG 770
SA+ P P SA + GQ P P GA AG Q+ P G + PS+
Sbjct: 793 SASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSP 850
Query: 771 GGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALS 829
G G G G PP P + +Q +A+ + A + + ++ S + +A+ S
Sbjct: 851 GMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSS 906
Query: 830 TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAGNPGSDYFP-----G 881
Q M N + N + PP N + G A +PG P
Sbjct: 907 PYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
Query: 882 GTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSP-NYTLESTSGNDGKPVSGGG 939
G G P P S S S S PP P + +SP + ++ S G++ +S G
Sbjct: 961 GKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPG 1019
Score = 95.1 bits (235), Expect = 4e-19
Identities = 168/663 (25%), Positives = 217/663 (32%), Gaps = 145/663 (21%)
Query: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573
H H +LQQQ Q QQQQQQQQQQQQQQQQQQ N +L
Sbjct: 40 HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
Query: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629
GG GG QP + E GG+ + G + P L +
Sbjct: 83 ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
Query: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689
P G+ R GL A G P P PGG G GP P
Sbjct: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
Query: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747
G PA PG + G G QSPG G + SAA+ P D ++ G P
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
S P +G G GGGGGS GGGGGGGA GA
Sbjct: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGA------------------GAGGA 276
Query: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867
G+ A++ A A+ G G + G
Sbjct: 277 GA----------------GAVAAAAAAAAAAAGG--------------GGGGGYGGSSAG 306
Query: 868 AAVAGNPGSDYFPGGTAPGAPGPGGPSGTS--SSGSKASGPPNPPAQGDGTS-LSPNYTL 924
V +P GG PG GG + S ++GS A G Q S +P
Sbjct: 307 YGVLSSPRQQ---GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQ 363
Query: 925 ESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
TS + GG + +YS+ P Q A+GA
Sbjct: 364 LLTSPSPMMRSYGGS-------------------YPEYSSPSAPPPPPSQPQSQAAAAGA 404
Query: 985 AVGG--SSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVG 1042
A GG ++AG G + A SP+W + P + G P +G
Sbjct: 405 AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQ---RSHPAMSPGTPG--------PTMG 453
Query: 1043 EFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPA 1102
+ ++ NP + + S SP GS P G G + P
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS-SPYPGGS--YGPPGPQRYPIGIQGRTPG 510
Query: 1103 LGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQL 1162
G+ P YG G G+ +Q + P S PP + L +Q Q
Sbjct: 511 AMAGMQYPQQQMPPQYGQQGVSGY-----CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQ 565
Query: 1163 QRQ 1165
+ Q
Sbjct: 566 RYQ 568
Score = 82.8 bits (203), Expect = 2e-15
Identities = 181/796 (22%), Positives = 249/796 (31%), Gaps = 114/796 (14%)
Query: 31 NTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHG 90
N ++ + A +GGP G P G GM M +H+ A G
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM------------MHSASAAAAGAPG 220
Query: 91 FFGG-QQPHHGHPGS---HHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAG-GLGS 145
Q H G+P S H+P P GG GG G GG G GA G G G+
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
Query: 146 QPPFAEGYEHMAESQGPESFGPQRPG----NLPDFHSSGASSHAVPAPCLPLDQSPNRAA 201
A A G +G G + P G L ++ +A
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 202 SFHGLPSSSGSDSHSLEPRRVTNQ--GAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHY 259
+ G +G + H NQ + + +Y G P + +P Q
Sbjct: 341 A-GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPE-YSSPSAPPPPPSQPQSQ 398
Query: 260 AAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSG 319
AA G A+ M M G A P QQ+ P G R G
Sbjct: 399 AAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQG 457
Query: 320 ARKMPVGLEP----SVGSRHPLMQPPQQA--------PPPPQQQP------------PQQ 355
+ P+ ++ +GS +P QP Q + PP PQ+ P Q
Sbjct: 458 SPMDPMVMKRPQLYGMGS-NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ 516
Query: 356 PPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLE 415
PQQQ PP G C +P + P L LPSQ Q P +
Sbjct: 517 YPQQQMPPQYGQQGVSGYCQQG-QQPYYSQQPQPP-HLPPQAQYLPSQSQQRYQPQQDMS 574
Query: 416 NRSMHPYSEPVFS-----------MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGS 464
S+P + +Q P P+ D P GS
Sbjct: 575 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 634
Query: 465 AGVDRCASWNGSMHNGA---LDNHLSP--SAYPGLPGEFTPPVPDSFPSGPPLQHPAP-D 518
S G N A H SP S+ PG P P P P G P
Sbjct: 635 ------TSSQGDQSNPAQSPFSPHASPHLSSIPGGPS----PSPVGSPVGSNQSRSGPIS 684
Query: 519 HQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQL 578
S+ Q Q Q + Q ++ + Q + Q +Q +
Sbjct: 685 PASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMS 744
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGG--STGAGRLGTFEQQAPHLAQESAWFSGPH 636
HP GG +H G + Q N G + G G + + + SA +SGP
Sbjct: 745 PHP---SPGGQMHAG-ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPG 800
Query: 637 PPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
P G +M G G P P G+ L R P P G++ ++
Sbjct: 801 PGMGISANNQMHGQG--------------PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT 846
Query: 697 SPGLQFGGSLGGLGQLQSPGAGVGLPS-------AASERRPPPPDFATSALGGQPGFPFG 749
S G+ Q PG G +P+ AA+ + A S G PG
Sbjct: 847 P-------SSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQS 899
Query: 750 AAGRQSTPHSGPGVNS 765
S+P+S P NS
Sbjct: 900 GLMASSSPYSQPMNNS 915
Score = 68.2 bits (165), Expect = 5e-11
Identities = 125/504 (24%), Positives = 179/504 (35%), Gaps = 69/504 (13%)
Query: 703 GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754
GG+ GG Q ++ P G SAA + PP S G + P A GR
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 755 STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
P G G PP A GGGGG A P ++ S ++ G + F++
Sbjct: 143 EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
+ + G + + S A + GAP G QN +G N
Sbjct: 198 GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
Query: 874 PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933
+++PG + PGA G GG G GS G G G + + + +
Sbjct: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
Query: 934 PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990
GGGG G G G +S P P GGA +S + A+G+A GG
Sbjct: 291 AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
Query: 991 AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044
AG+ + GA + LTSPS G P +S +++
Sbjct: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
Query: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099
+ +D + + A A + SP P +G + P P
Sbjct: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
Query: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLE 1154
P G+G SN S P Y GG G PG P Q RTP + +G P + P +
Sbjct: 468 PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQ 525
Query: 1155 ILQAQI----QLQRQQFSISEDQP 1174
Q + Q +Q + + QP
Sbjct: 526 YGQQGVSGYCQQGQQPYYSQQPQP 549
Score = 57.8 bits (138), Expect = 7e-08
Identities = 235/1074 (21%), Positives = 314/1074 (29%), Gaps = 206/1074 (19%)
Query: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394
H L Q Q QQQ QQ QQQ P + NS G GG
Sbjct: 46 HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
Query: 395 DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454
GP E P H S PP ++ DAPP M
Sbjct: 91 QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
Query: 455 KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512
R++ PG GAL P A PG G P + + S P
Sbjct: 138 AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
Query: 513 QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
P ++ Q QQ L N Q
Sbjct: 183 SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
Query: 573 PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630
P ++ G G G GG GG GG GG GAG G A A +A
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 631 -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
+ G G L R G G+ P G S A G F G Q
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
Query: 683 PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717
P P + PSP ++ +GGS G Q A
Sbjct: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 718 GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753
G+GL AA+++R P P +G G P G
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
Query: 754 QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPDFQPSQRTSASK 801
S PHS P +SP G G G + G G YP Q P Q
Sbjct: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ--MPPQYGQQGV 531
Query: 802 LGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKR 858
G G +++ +L Q+ L + Q + + PP
Sbjct: 532 SGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
Query: 859 K-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPA 911
K L Q E + + D P GT SG++SS S P P
Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP- 648
Query: 912 QGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGA 971
SP+ + S G P G G + SG +SP A+
Sbjct: 649 ------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP--------ASIPGSQM 693
Query: 972 PGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGG 1031
P PG Q S SS +P P E+ + + G Q G
Sbjct: 694 PPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT------GP 741
Query: 1032 AKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLP 1085
+ S SP + F S +Y + S PQ SR P +G P
Sbjct: 742 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSRPPAYSGVPSAS 795
Query: 1086 PRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
G G G GP P A+ LG M ++ + G P +PG+ Q
Sbjct: 796 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ 855
Query: 1136 RTPTSSSGAPPP------DEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKK--GECAV 1187
P G P P E + A Q +Q S GL +
Sbjct: 856 GGP--GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMN 913
Query: 1188 GASGAQNGDSELGSCCSEAVKSAMSTIDLDSLMAEHSAAWYMPADKALVDSADDDKTLAP 1247
+S N + S V S+ +++ L +M+ + +P AD + P
Sbjct: 914 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPL------KADGKEEGTP 967
Query: 1248 WEKAKPQNPNSKEAHDLPANKASASQPGSHLQCLSVHCTDDVGDAKARASVPTW 1301
++K ++ S + P + P S + S + GD S P W
Sbjct: 968 QPESKSKDSYSSQGISQPPTPGNLPVP-SPMSPSSASISSFHGDESDSISSPGW 1020
Score = 56.2 bits (134), Expect = 2e-07
Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)
Query: 95 QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147
Q P + GS Q G N PG AS HG GG + +
Sbjct: 1161 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1220
Query: 148 PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205
PF++ +++S P+ S P P + G S +P + PN+ F G
Sbjct: 1221 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1266
Query: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261
+ GS + ++ N D YN ++PSG + Q P+ A+
Sbjct: 1267 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1320
Query: 262 ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303
G+Q PG P + P GL K H PP ++ + Q
Sbjct: 1321 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1379
Query: 304 QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359
QQQ+ + + +SG + P+ G P SR + P Q PP P Q
Sbjct: 1380 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1439
Query: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417
+ P R + +P P Q G P G Q P P + + P R+ +
Sbjct: 1440 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1491
Query: 418 SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477
S P + P + + +Q PP +P + P S + + +
Sbjct: 1492 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1540
Query: 478 HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515
+L+N +SPS P LP + P VP S +GPP Q P
Sbjct: 1541 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1582
Score = 41.6 bits (96), Expect = 0.005
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
QQQ QQQQQ QQQQQQH + G G P P + P +
Sbjct: 58 QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
Query: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392
Q PP PP LL + ++ PP + P G P G
Sbjct: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Score = 36.2 bits (82), Expect = 0.21
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
Query: 638 PPGDLLPRRMGGSGLPADCGPHDP--SLAPPPPPGGSGVLFRGPLQEPMRMPGE-GHVPA 694
P G + P + G S + HDP ++ P + + P Q+ M MP G +P
Sbjct: 1201 PHGQMTPMQGGRS---STISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPY 1257
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE---RRPPPPDFATSALGGQPGFPFGAA 751
P+ FGG G + +P+++ + + P + +G + FP+GA+
Sbjct: 1258 EPNKD-PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1316
Query: 752 GRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQ 792
H G P G GG G YP QP+++
Sbjct: 1317 --YDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYK 1355
Score = 33.1 bits (74), Expect = 1.8
Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)
Query: 51 AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109
AMS LG +G + PYG + H Q P G GQ P+ GH +P Q
Sbjct: 1299 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1351
Query: 110 --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154
+ H G +G P + H G + YGG+ G +P
Sbjct: 1352 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1400
Query: 155 HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211
+ Q P + +R PG + +H +P + P +++S G +
Sbjct: 1401 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1447
Query: 212 SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267
+ + + QG + YPG + DM P + E Q P + + RQ
Sbjct: 1448 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1502
Query: 268 GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326
M +A M QP + PQ Q H S R +
Sbjct: 1503 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1548
Query: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366
+ PS P M+ + P P Q PP QPPP PPG
Sbjct: 1549 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1593
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 104 bits (259), Expect = 6e-22
Identities = 292/1206 (24%), Positives = 376/1206 (31%), Gaps = 234/1206 (19%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHH--G 100
GPPGP P PP LG N P + G+ E GG+ V G G P G
Sbjct: 142 GPPGPPGPP-----GPPGLGGNFAPQLSY--GYDEKSTGGIS---VPGPMGPSGPRGLPG 191
Query: 101 HPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQ-PPFAEGYEHMAES 159
PG+ P F GP PG G GA+G +G + PP G
Sbjct: 192 PPGAPGPQ--------GFQGP-PGEP--------GEPGASGPMGPRGPPGPPG----KNG 230
Query: 160 QGPESFGPQRPGNLPDFHSSGASSHAVPAPC-LPLDQSPNRAASFHGLPSSSGSDSHSLE 218
E+ P RPG GA +P LP + + G +G E
Sbjct: 231 DDGEAGKPGRPGERGPPGPQGA--RGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGE 288
Query: 219 PRRVTNQGAVDSL-EYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMP 277
P GA + PGE G P+ + G A G P G G + P
Sbjct: 289 PGSPGENGAPGQMGPRGLPGER--GRPGAPGPAGARGN--DGATGAAGPPGP-TGPAGPP 343
Query: 278 RAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPL 337
G VG +K A P Q P+ + PQ + + G + G + G++
Sbjct: 344 GFPGAVG-AKGEAGP--QGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGAN 400
Query: 338 MQPP-QQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDG 396
P AP P + P P Q P PPG P+ GE G P G
Sbjct: 401 GAPGIAGAPGFPGARGPSGP--QGPGGPPG------------PKGNSGEPGAPGSKGDTG 446
Query: 397 GPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKR 456
P P E EP + PP + + F + K
Sbjct: 447 AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506
Query: 457 PRFD--FPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQH 514
P + PG AG G L + PG PG P + P GP Q
Sbjct: 507 PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPG----PDGKTGPPGPAGQD 562
Query: 515 PAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPN 574
P +R Q + P
Sbjct: 563 GRPGPPG--------------------------------------PPGARGQAGVMGFPG 584
Query: 575 -LAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG----AGRLGTFEQQAPHLAQES 629
G PG G+ G+ GP G + + E G+ G AG G +Q P +
Sbjct: 585 PKGAAGEPGKAGERGVP--GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 642
Query: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPP-----------PPGGSGVLFRG 678
GP PPG+ + G G+P D G PS A PPG +G RG
Sbjct: 643 QGLPGPAGPPGEA--GKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGP--RG 698
Query: 679 PLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPG--AGVGLPSAASERRPPPPDFA 736
P +G A +PG Q L G+ PG GLP +R P A
Sbjct: 699 ANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM-----PGERGAAGLPGPKGDRGDAGPKGA 753
Query: 737 TSALG-----------GQPGFPFGAAGRQSTPHSGP-GVNSPPSAGGGGGSSGGGG---- 780
+ G G PG P GA G + SGP G P A G G G G
Sbjct: 754 DGSPGKDGVRGLTGPIGPPG-PAGAPGDKG--ESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Query: 781 GGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLG 840
G A PP D QP + GA P+ G I ++G
Sbjct: 811 AGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGP-------------IGNVG 857
Query: 841 APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTA--PGAPGPGGPSG--- 895
AP PP + A G PG P G A PG PGP G G
Sbjct: 858 APGAKGARGSAGPPG-----ATGFPGAAGRVGPPG----PSGNAGPPGPPGPAGKEGGKG 908
Query: 896 ----TSSSGSKAS-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG--GGRG----RG 944
T +G GPP PP G SP + +G G P G G RG G
Sbjct: 909 PRGETGPAGRPGEVGPPGPPGPA-GEKGSPG--ADGPAGAPGTPGPQGIAGQRGVVGLPG 965
Query: 945 RRKRDSGHVSPGTFFDKYSAAPDSG----------GAPGVS--PGQQQASGAAVGGSSAG 992
+R PG + P G PG++ PG+ GA S G
Sbjct: 966 QRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPG 1025
Query: 993 ETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPN-----VGEFASD 1047
++ T P+ GA G P +G + P VG +
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPG-APGPVGPAGKSGDRGETGPAGPAGPVGPVGAR 1084
Query: 1048 EVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG-------AGEHGPKAPP 1100
+ + + + +K R P PP G +G GP+ PP
Sbjct: 1085 GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP 1144
Query: 1101 PALG-------------LGIMSNSTSTPDS--YGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
+ G +G T D+ G G PG PG PG S P
Sbjct: 1145 GSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQP 1204
Query: 1146 PPDEIH 1151
P ++ H
Sbjct: 1205 PQEKAH 1210
Score = 99.0 bits (245), Expect = 3e-20
Identities = 219/905 (24%), Positives = 273/905 (30%), Gaps = 167/905 (18%)
Query: 326 GLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPAL-----PR 380
G+E G P P A PP + P QP PP PPG PP L P+
Sbjct: 109 GVEGPKGDTGP-RGPRGPAGPPGRDGIPGQPGLPGPPGPPG-----PPGPPGLGGNFAPQ 162
Query: 381 PQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQ 440
G +GG+ GPM PS P P AP
Sbjct: 163 LSYGYDEKSTGGISVPGPMGPSGPRGL------------------------PGPPGAPGP 198
Query: 441 RLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTP 500
Q F PP PG G G + + PG PGE P
Sbjct: 199 --QGFQGPP----------GEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGP 246
Query: 501 PVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQ 560
P P G P P ++ + + + + +N A Q
Sbjct: 247 PGPQG-ARGLPGTAGLP---GMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGA--PGQ 300
Query: 561 MASRNQQQRLRQPNLAQLGHPGDVG-------QGGLVHGGPVGGLAQPNFEREGGSTG-A 612
M R +P G PG G G GP G P F G+ G A
Sbjct: 301 MGPRGLPGERGRP-----GAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEA 355
Query: 613 GRLGTFEQQAPHLAQES------AWFSGPHPPPG-DLLPRRMGGSGLP------------ 653
G G + P + A +GP PG D P G +G P
Sbjct: 356 GPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGAR 415
Query: 654 ADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPG-LQFGGSLGGLGQL 712
GP P PP P G SG EP +G A PG + G G G+
Sbjct: 416 GPSGPQGPG-GPPGPKGNSG--------EPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEE 466
Query: 713 QSPGA-----GVGLPSAASERRPPPPDFATSALG--------GQPGFPFGAAGRQSTPHS 759
GA GLP ER P A G G+ G P G AG + +P
Sbjct: 467 GKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSP-GPAGPKGSPGE 525
Query: 760 G--PGVNSPPSAGGGGGSSGG-GGGGGAYPPQP---DFQPSQRTSASKLGALSLGSFNKP 813
PG P A G GS G G G PP P D +P G + F P
Sbjct: 526 AGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGP 585
Query: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
G+ A ++G + + PP + G AG+
Sbjct: 586 KGAAGEPGK----AGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP--AGS 639
Query: 874 PGSDYFPGGTAP----------------GAPGPGGPSGTSSSGSK--ASGPPNPPAQGDG 915
PG PG P GAPGP G G + GPP P
Sbjct: 640 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699
Query: 916 TSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS 975
N + +G G P S G +G PG D+ A P GA G S
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPK--GADG-S 756
Query: 976 PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSD 1035
PG+ G G A P +K + PS G G G + +
Sbjct: 757 PGKDGVRGLT---GPIGPPGPAGAPGDKGESGPSGPAGPTGARGAP---------GDRGE 804
Query: 1036 SSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG----- 1090
P FA + + + + A K P P PP +G
Sbjct: 805 PGPPGPAGFAGPP-----GADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAP 859
Query: 1091 --AGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSG-APPP 1147
G G PP A G + P G G PG PG G E + P +G A P
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRP 919
Query: 1148 DEIHP 1152
E+ P
Sbjct: 920 GEVGP 924
Score = 84.3 bits (207), Expect = 7e-16
Identities = 159/628 (25%), Positives = 213/628 (33%), Gaps = 118/628 (18%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPHP 637
G PG+ G+ G GP+G P + G G AG+ G ++ P Q + G
Sbjct: 203 GPPGEPGEPGA--SGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAG 260
Query: 638 PPGDLLPRRMGG-SGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
PG R G G D GP P P PG +G + P +PGE P P
Sbjct: 261 LPGMKGHRGFSGLDGAKGDAGPAGPK-GEPGSPGENGAPGQ---MGPRGLPGERGRPGAP 316
Query: 697 SPGLQFG--GSLGGLGQL--QSPGAGVGLPSAASERRPPPPDFATSALG-----GQPG-- 745
P G G+ G G P G P A + P + G G+PG
Sbjct: 317 GPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPP 376
Query: 746 FPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGG-------AYPPQPDFQPSQRTS 798
P GAAG P PG + P A G G+ G G G + P P P + +
Sbjct: 377 GPAGAAG----PAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGN 432
Query: 799 ASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPP---- 854
+ + GA P SK + GA + PP
Sbjct: 433 SGEPGA--------PGSKGDT--------------------GAKGEPGPVGVQGPPGPAG 464
Query: 855 -EGKRKLSQNETDGAAVAG------NPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPP 907
EGKR ++ E + G PGS FPG A G GP GP+G S A GP
Sbjct: 465 EEGKRG-ARGEPGPTGLPGPPGERGGPGSRGFPG--ADGVAGPKGPAGERGSPGPA-GPK 520
Query: 908 NPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPD 967
P + + + +G+ G P G G +D PG P
Sbjct: 521 GSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGP--------PG 572
Query: 968 SGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGS 1027
+ G GV G GAA AGE RG P P P+ GK E P G
Sbjct: 573 ARGQAGVM-GFPGPKGAAGEPGKAGE-RGVPGP--PGAVGPA-GKDGEAGAQGPPGPAGP 627
Query: 1028 L-DGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPP 1086
+ G + + SP A + Q + +P +G+
Sbjct: 628 AGERGEQGPAGSPGFQGLPGPAGPPGEAGKP-------GEQGVPGDLGAPGPSGARG--E 678
Query: 1087 RGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGT---PGLEQV-------- 1135
RG GE G + PP G + + + G G PG PG+ PGL+ +
Sbjct: 679 RGF-PGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAG 737
Query: 1136 ----------RTPTSSSGAPPPDEIHPL 1153
P + G+P D + L
Sbjct: 738 LPGPKGDRGDAGPKGADGSPGKDGVRGL 765
Score = 56.2 bits (134), Expect = 2e-07
Identities = 89/335 (26%), Positives = 112/335 (33%), Gaps = 64/335 (19%)
Query: 854 PEGKRKLSQNETDGA-------------AVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900
P+G + ET G AG PG D PG PG PGP GP G
Sbjct: 96 PDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPG--QPGLPGPPGPPG----- 148
Query: 901 SKASGPPNPPAQGDGTS--LSPNYTLESTSGNDGKPVSGGGGRG-RGRRKRDSGHVSPGT 957
PP PP G + LS Y +ST G +S G G G R +PG
Sbjct: 149 -----PPGPPGLGGNFAPQLSYGYDEKSTGG-----ISVPGPMGPSGPRGLPGPPGAPGP 198
Query: 958 FFDKYSAAPDSGGAPGVSP--GQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAE 1015
+ P G PG S G + G GE P E+ P +G
Sbjct: 199 --QGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLP 256
Query: 1016 LLLGDQPDLIG-----SLDG--------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSS 1062
G P + G LDG G K + SP A ++ +
Sbjct: 257 GTAG-LPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENG-APGQMGPRGLPGERGRPG 314
Query: 1063 SDNP------QALVKASRSPLVTGSPKLP--PRGVGA-GEHGPKAPPPALGLGIMSNSTS 1113
+ P A+ P TG P P VGA GE GP+ P + G +
Sbjct: 315 APGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPG 374
Query: 1114 TPDSYGGGGGPGHPGT---PGLEQVRTPTSSSGAP 1145
P G G G+PG PG + +GAP
Sbjct: 375 PPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 409
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 103 bits (256), Expect = 1e-21
Identities = 288/1239 (23%), Positives = 401/1239 (32%), Gaps = 273/1239 (22%)
Query: 8 EPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPG-----PVDPAMSALGEPPILG 62
EP + + N G R ++N + P GG P A +AL PP G
Sbjct: 97 EPDLKNSNGNAGPRP------ALNNNLTEPPGGGGGGSSDGVGAPPHSAAAAL-PPPAYG 149
Query: 63 MNMEPYG-------------FHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH- 108
+PYG FH + H + GL A G GG +P+ G + H H
Sbjct: 150 FG-QPYGRSPSAVAAAAAAVFHQQ-HGGQQSPGLAALQSGGG-GGLEPYAGPQQNSHDHG 206
Query: 109 ----QHHPHFGGNFGGPDPGASCLHGGRLLGY--GGAAGGLGSQPPFAEGYEHMAESQGP 162
Q++ ++ P P + G GAA GS+PP + + S
Sbjct: 207 FPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSS---ASASSSS 263
Query: 163 ESFGPQRPGNLPDFHSSGASSHAVPAPCLP----LDQSPNRAASFHGLPSSSGSDSHSLE 218
SF QR G + S A P L SP+ A + G P S
Sbjct: 264 SSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSG----- 318
Query: 219 PRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPR 278
G D G A G DM S G AA GGA + P
Sbjct: 319 -------GPQD-------GGAGKGPADM--ASQCWGAAAAAAAAAAASGGAQQRSHHAPM 362
Query: 279 AAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLM 338
+ G G QP + PQ Q +G P
Sbjct: 363 SPGSSGGG---GQPLARTPQPSSPMDQ-------------------------MGKMRP-- 392
Query: 339 QPPQQAPPPPQQQPPQQPPQQ---QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ- 394
QP P QQQ P PQQ P P G + P P QG A + GGL
Sbjct: 393 QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYG-----SQTPQRYPMTMQGRAQSAMGGLSY 447
Query: 395 --------DGGPMLPSQHAQFEYPIHRLENRSMHPYSE-PVFSMQHPPPQQAPNQRLQHF 445
GP Q Q Y +S HP + P +S Q PP Q P+ +
Sbjct: 448 TQQIPPYGQQGPSGYGQQGQTPY----YNQQSPHPQQQQPPYSQQ--PPSQTPHAQ---- 497
Query: 446 DAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDS 505
P Y P + P PP
Sbjct: 498 --PSYQQ----------------------------------QPQSQPPQLQSSQPPYSQQ 521
Query: 506 FPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMAS-- 563
PS PP Q + S Q QQ Q Q Q Q Q QQQQ +Q A + Q A+
Sbjct: 522 -PSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYP 580
Query: 564 RNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAP 623
+ Q Q+ +Q +Q P P L+Q +F + S + Q+
Sbjct: 581 QPQSQQSQQTAYSQQRFP------------PPQELSQDSFGSQASSAPSMTSSKGGQEDM 628
Query: 624 HLAQESAWFSGPHPPPG-DLLPRRMGG--------SGLPADCG---------------PH 659
+L+ +S S P D LP G SG+ + G PH
Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPH 688
Query: 660 DPSL-APPPPPGGSGVLF----RGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQS 714
P + P P P GS GPL P +PG P PS G +
Sbjct: 689 LPGIRGPSPSPVGSPASVAQSRSGPL-SPAAVPGNQMPPRPPS------GQSDSIMHPSM 741
Query: 715 PGAGVGLPSAASERRPPPPDFATSALGGQPG---FPFGAAGRQSTPHSGPGVNSPPSAGG 771
+ + +R P P +++ QPG P +G Q H+G G S G
Sbjct: 742 NQSSIAQDRGYMQRNPQMPQYSSP----QPGSALSPRQPSGGQI--HTGMGSYQQNSMGS 795
Query: 772 GGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTA 831
G G G G YP QP++ + G G N + + GQ + T
Sbjct: 796 YGPQGGQYGPQGGYPRQPNYNALPNANYPSAG--MAGGINPMGAGGQMHGQPGIPPYGTL 853
Query: 832 CQNMI--ASLG----APNL-----NVTFNKKNPPEGKRKLSQNETDGAAVAGN------P 874
+ AS+G PN+ V PP G + +Q VA N P
Sbjct: 854 PPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPP 913
Query: 875 GSDYFPGGTAPGAPGPGGPSGTS-SSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDG- 932
G +P G G G P G +S + P PP GT + + + ++ G
Sbjct: 914 G---YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGL 970
Query: 933 -----KPVSGGGGRGRGRRKRDS---GHVSPGTFFDKYSAAPDSGGAP----GVSPGQQQ 980
P + + G K +S S T +K + + GG P V
Sbjct: 971 GDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAF 1030
Query: 981 ASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQP--DLIGSLDGGAKSDSSS 1038
A+G ++ P + S G + ++ +L +L+ G S ++S
Sbjct: 1031 TEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAAS 1090
Query: 1039 PNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKL-PPRGVGAGE-HGP 1096
+ YA E ++ D P + A+ S PK+ PP G+G GP
Sbjct: 1091 ----SLKKQYIQCLYAFECKIERGEDPPPDIFAAADSK--KSQPKIQPPSPAGSGSMQGP 1144
Query: 1097 KAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
+ P STS+ + GG P P + Q+
Sbjct: 1145 QTP----------QSTSSSMAEGGDLKPPTPASTPHSQI 1173
Score = 84.3 bits (207), Expect = 7e-16
Identities = 266/1237 (21%), Positives = 393/1237 (31%), Gaps = 268/1237 (21%)
Query: 3 GLDQFE-PQVNSRNAGQGERNFNETGLSMNTHFK-APAFHTGGPPG--PVDPAMSALGEP 58
GL+ + PQ NS + G +N + + + APA+ P G P A +A G
Sbjct: 191 GLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSK 250
Query: 59 PILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHP----------- 107
P P A S + AQ G GG P G+ P
Sbjct: 251 P-------PPSSSASASS---SSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT 300
Query: 108 -------HQHHPHFGGNF-GGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAES 159
+Q +P GG++ GGP G + + A + A G
Sbjct: 301 SPSSARGYQGYP--GGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSH 358
Query: 160 QGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE- 218
P S G G P + P P P+DQ +G G++ +S +
Sbjct: 359 HAPMSPGSSGGGGQPLART--------PQPSSPMDQMGKMRPQPYG-----GTNPYSQQQ 405
Query: 219 -PRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAG----RQVPGGAFPGA 273
P QG + YPG+ P +G+ G +Q+P G
Sbjct: 406 GPPSGPQQG------HGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGP 459
Query: 274 SAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGS 333
S + ++ P QQQP QQP Q +PS
Sbjct: 460 SGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPH-----------------AQPSY-Q 501
Query: 334 RHPLMQPPQ-QAPPPPQQQPPQQPPQQQPPPP-PGLLVRQNSCPPALPRPQQGEAGTPSG 391
+ P QPPQ Q+ PP Q P QPP QQ P P P P + P Q +A +P
Sbjct: 502 QQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQ 561
Query: 392 GLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYM 451
Q P + Q YP + + YS+ F PP + + + + P M
Sbjct: 562 QQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP---PPQELSQDSFGSQASSAPSM 618
Query: 452 NVAK------------RPRF--DFPGS---------------AGVDRCASWNGSMHNGAL 482
+K RP D GS +S G N A
Sbjct: 619 TSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPA- 677
Query: 483 DNHLSPSAYPGLPGEFTP-PVP----------------------DSFPSGPP------LQ 513
+ SP P LPG P P P + P PP +
Sbjct: 678 QSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIM 737
Query: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQR---- 569
HP+ + S+ Q + Q+ Q Q Q ++ + + M S Q
Sbjct: 738 HPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYG 797
Query: 570 ------------LRQPNLAQL-----------GHPGDVGQGGLVHGGPVGGLAQPNFERE 606
RQPN L G +G GG +HG P G+ P
Sbjct: 798 PQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP--GIP-PYGTLP 854
Query: 607 GGSTGAGRLGTFEQQAPHLAQESAWF-SGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAP 665
G +G P++A SG PPPG + R+ + + + P
Sbjct: 855 PGRMSHASMGN-RPYGPNMANMPPQVGSGMCPPPGGM-NRKTQETAVAMHVAANSIQNRP 912
Query: 666 PP-------------PPGGSGVLFRGPLQEPMRMP-GEGHVPALPSPGLQFGGSLGGLGQ 711
P PP G G+ + P P G A S G+ + GLG
Sbjct: 913 PGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGLGD 972
Query: 712 LQSPGA------GVGLPSAASERRPPPPDFATSA-------LGGQPGFPFGAAGRQS-TP 757
++ A G P S+ + T+ LGG+P + T
Sbjct: 973 VKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTE 1032
Query: 758 HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSK- 816
G+ + P+ G +P S ++G L+ + NK +
Sbjct: 1033 EKAMGMTNLPAVGR----------------KPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 817 -DNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPE----GKRKLSQNETDGAAVA 871
NL + +A S+ + I L A + + PP+ K SQ + + A
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 872 GNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGND 931
G+ GP P TSSS ++ P S P S S +
Sbjct: 1137 GSGSMQ-----------GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV 1185
Query: 932 GKPVSGGGGRGRGRRKRDSGHVSPG--------TFFDKYSAAPDS----------GGAPG 973
G + G +KR+S +PG + S P+ G P
Sbjct: 1186 GIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPF 1245
Query: 974 VSPGQ----------QQASGAAVGGSSAGETRGAP--TPHEKALTSPSWGKGAELLLG-D 1020
+S GQ +A+G +G + G + P P+++ T P G + G
Sbjct: 1246 MSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAP 1305
Query: 1021 QPDLIGS-LDGGAKSDSSSPNVGEFASDEVSTSYANE 1056
QP+L+ S D G S S P + + SY N+
Sbjct: 1306 QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQ 1342
Score = 60.1 bits (144), Expect = 1e-08
Identities = 130/561 (23%), Positives = 180/561 (32%), Gaps = 112/561 (19%)
Query: 661 PSLAPPPPPG------------------GSGVLFRGPLQEPMRMPGEGHVPALPSPGLQF 702
P++ PP P G GSG GP EP G+ P+
Sbjct: 61 PAVGPPQPLGKELQDGAESNGGGGGGGAGSG---GGPGAEPDLKNSNGNAGPRPALNNNL 117
Query: 703 GGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAG----RQSTPH 758
GG G S G G SAA+ PP F G P AA +Q
Sbjct: 118 TEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFG-QPYGRSPSAVAAAAAAVFHQQHGGQ 176
Query: 759 SGPGVNSPPSAGGGGGSSGGG-------------------GGGGAYPPQPDFQPSQRTSA 799
PG+ + S GGGG G AYPP P+ S+
Sbjct: 177 QSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPP---APAYALSS 233
Query: 800 SKLG------ALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNP 853
+ G A + GS PSS S ++ S+ Q ++G +
Sbjct: 234 PRGGTPGSGAAAAAGSKPPPSS-----SASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQ 288
Query: 854 PEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPG----GPSGTSSSGSKASGPPNP 909
P L+Q T ++ G G +PGG G P G GP+ +S A+
Sbjct: 289 PTATPTLNQLLTSPSSARGYQG---YPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAA 345
Query: 910 PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
A G + ++ + G+ SGGGG+ R + S SP K P G
Sbjct: 346 AAAASGGAQQRSHHAPMSPGS-----SGGGGQPLARTPQPS---SPMDQMGKMRPQP-YG 396
Query: 970 GAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLD 1029
G S Q SG G G+ G+ TP +T + A
Sbjct: 397 GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAM-------------- 442
Query: 1030 GGAKSDSSSPNVGEFA----SDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLP 1085
GG P G+ + T Y N+ S +PQ + P P
Sbjct: 443 GGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQ-----QSPHPQ----QQQPPYSQQPPSQT 493
Query: 1086 PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
P + + P++ PP L +S P P H +P + T+
Sbjct: 494 PHAQPSYQQQPQSQPPQL-------QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ--- 543
Query: 1146 PPDEIHPLEILQAQIQLQRQQ 1166
P P QAQ Q+QQ
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQ 564
Score = 57.4 bits (137), Expect = 9e-08
Identities = 107/440 (24%), Positives = 143/440 (32%), Gaps = 72/440 (16%)
Query: 721 LPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPP------------S 768
L A ++R A +A + G AAG++S GP V P +
Sbjct: 24 LKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQES---EGPAVGPPQPLGKELQDGAESN 80
Query: 769 AGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAAL 828
GGGGG +G GGG GA +PD + S +A AL+ P G +
Sbjct: 81 GGGGGGGAGSGGGPGA---EPDLKNS-NGNAGPRPALNNNLTEPPGGG----GGGSSDGV 132
Query: 829 STACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAP 888
+ A+L P P G+ + A G PG A +
Sbjct: 133 GAPPHSAAAALPPPAYGF-----GQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSG 187
Query: 889 GPGG--PSGTSSSGSKASGPPNP------PAQGDGTSLSPNYTLESTSGNDGKPVSGGGG 940
G GG P S G PN P + +P Y L S G G P SG
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRG--GTPGSGAAA 245
Query: 941 RGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTP 1000
+ S SA+ S S QQ GA GG + G P P
Sbjct: 246 AAGSKPPPSS------------SASASSSS----SSFAQQRFGAMGGGGPSAAGGGTPQP 289
Query: 1001 H-----EKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYAN 1055
+ LTSPS +G + G G GG + + + AS + A
Sbjct: 290 TATPTLNQLLTSPSSARGYQGYPG------GDYSGGPQDGGAGKGPADMASQCWGAAAAA 343
Query: 1056 EDEVSSSSDNPQALVKASRSPLVTGS-----PKLPPRGVGAGEHGPKAPPPALGLGIMSN 1110
++S Q A SP +G + P + G P P G S
Sbjct: 344 AAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQ 403
Query: 1111 STSTPDSYGGGGGPGHPGTP 1130
P G G G+PG P
Sbjct: 404 QQGPPS--GPQQGHGYPGQP 421
Score = 52.4 bits (124), Expect = 3e-06
Identities = 85/329 (25%), Positives = 116/329 (35%), Gaps = 82/329 (24%)
Query: 853 PPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQ 912
PP +K Q + + A GG A A +++G ++ GP P Q
Sbjct: 20 PPSELKKAEQQQREEA------------GGEAAAAAAAERGEMKAAAGQESEGPAVGPPQ 67
Query: 913 GDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAP 972
G L ES G G GG G G G PG D ++ ++G P
Sbjct: 68 PLGKELQDG--AESNGGGGG----GGAGSGGG----------PGAEPDLKNSNGNAGPRP 111
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLI------- 1025
++ + G GGSS G GAP PH A P G G P +
Sbjct: 112 ALNNNLTEPPGGGGGGSSDGV--GAP-PHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAV 168
Query: 1026 ---------------------GSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSD 1064
G L+ A +S + G F + + ++ Y N S+
Sbjct: 169 FHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHG-FPNHQYNSYYPNR-----SAY 222
Query: 1065 NPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTS-TPDSYG--GG 1121
P A A SP G+P G GA PPP+ S+S+S +G GG
Sbjct: 223 PPPAPAYALSSPR-GGTP-----GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGG 276
Query: 1122 GGPGHPG--------TPGLEQVRTPTSSS 1142
GGP G TP L Q+ T SS+
Sbjct: 277 GGPSAAGGGTPQPTATPTLNQLLTSPSSA 305
Score = 47.0 bits (110), Expect = 1e-04
Identities = 95/418 (22%), Positives = 135/418 (32%), Gaps = 88/418 (21%)
Query: 135 GYGGAAGGLGSQPPFAEGYEHMAESQG--PE---SFGPQRPGNLPDFHSSGASSHAVPAP 189
G G A G P+ Y+ + G PE S G +P +P SG S + P
Sbjct: 1267 GLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPP 1326
Query: 190 CLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSP 249
Q R S+ S+ G+ S S P + T Y P + G
Sbjct: 1327 -QQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP----PA 1381
Query: 250 SDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQ 309
EG++ ++P + G + P Q QP QQQ Q Q
Sbjct: 1382 KRHEGEM-----------------YSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQ 1424
Query: 310 HGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPP---PQQQPPQQPPQQQPPPPPG 366
V+ + G+ +P P PQ Q P Q + + PPG
Sbjct: 1425 QDVYNQ---------------YGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPG 1469
Query: 367 LLVRQNSCPPALPRPQQGEA-----GTPSGGLQD------------GGPMLPSQHA--QF 407
+QN P + P Q A GT G D P P+ H +
Sbjct: 1470 TNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRT 1529
Query: 408 EYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRF-----DFP 462
+ +H + R+ H S P + PP P+ + PP N P
Sbjct: 1530 DEMLH-TDQRANHEGSWPSHGTRQPP--YGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVS 1586
Query: 463 GSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG-----EFTPPVPDSFPSGPPLQHP 515
A + R ++N SPS P L + PPVP S + P+Q P
Sbjct: 1587 SPAPLPR-----------PMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPP 1633
Score = 44.3 bits (103), Expect = 8e-04
Identities = 75/300 (25%), Positives = 97/300 (32%), Gaps = 61/300 (20%)
Query: 336 PLMQPPQQAPPPPQQQPPQQPPQQQP----------PPPPGLLVRQNSCPPALPRPQQGE 385
P +QPP A Q P Q PQ PP P S P + P G
Sbjct: 1128 PKIQPPSPAGSGSMQGP--QTPQSTSSSMAEGGDLKPPTPA------STPHSQIPPLPGM 1179
Query: 386 AGTPSGGLQDG------------GPMLPSQHAQFEYPIHRLENR-SMHPYSEPVFSMQHP 432
+ + S G+QD M P+ Q + R S P +P SM+
Sbjct: 1180 SRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKA 1239
Query: 433 PPQ-------QAPNQRL----QHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGA 481
P Q PN + P NVA PR +P DR + G G
Sbjct: 1240 PGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEG- 1298
Query: 482 LDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQ 541
++S A P P+ PS P +P QQQQQQQQ+ Q
Sbjct: 1299 ---NMSTGA----------PQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFST 1345
Query: 542 QQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQP 601
Q M +Q QQQ ++P G P +G + G QP
Sbjct: 1346 QGTPSGSPFPSQQTTMYQQ-----QQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQP 1400
Score = 32.3 bits (72), Expect = 3.1
Identities = 75/345 (21%), Positives = 107/345 (31%), Gaps = 78/345 (22%)
Query: 245 DMFSPSDSEGQLPHYAAGRQVPGGAFPGASA-MPRAAGMVGLSKMHAQPPQQQPQQQQQP 303
D+F+ +DS+ P G+ G ++ M + P P Q P
Sbjct: 1116 DIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPP 1175
Query: 304 QQQQQQHGVFFERFSGARKMPVGLEPSVGS-RHPLMQPPQQAPPPPQQQPPQQPPQQ--- 359
+R VG++ + Q P P QP
Sbjct: 1176 LPGM------------SRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGR 1223
Query: 360 ---QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQD-----GGPML------PSQHA 405
+P P +R+ P + P G+ P+GG+ D GP L P QH
Sbjct: 1224 MSYEPNKDPYGSMRK--APGSDPFMSSGQG--PNGGMGDPYSRAAGPGLGNVAMGPRQHY 1279
Query: 406 QFEYPIHRLENR----------------SMHPYSEPVFSMQHP---PPQQAPNQRLQHFD 446
+ P R+ ++ P S P M P PPQQ Q+ +H
Sbjct: 1280 PYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMP-SNPDSGMYSPSRYPPQQQQQQQQRH-- 1336
Query: 447 APPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPP----- 501
Y N +F G+ S +M+ N+ P + G + PP
Sbjct: 1337 -DSYGN-----QFSTQGTPSGSPFPSQQTTMYQQQQQNYKRP-----MDGTYGPPAKRHE 1385
Query: 502 -----VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQ 541
VP S G P Q P Q QQQ Q QQ Q
Sbjct: 1386 GEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQ 1430
Score = 32.0 bits (71), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 1090 GAGEHGPKA-PPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
G GP PP LG + + S + GGGGG G G PG E ++ + P P
Sbjct: 55 GQESEGPAVGPPQPLGKELQDGAES--NGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRP 111
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 103 bits (256), Expect = 1e-21
Identities = 288/1239 (23%), Positives = 401/1239 (32%), Gaps = 273/1239 (22%)
Query: 8 EPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPG-----PVDPAMSALGEPPILG 62
EP + + N G R ++N + P GG P A +AL PP G
Sbjct: 97 EPDLKNSNGNAGPRP------ALNNNLTEPPGGGGGGSSDGVGAPPHSAAAAL-PPPAYG 149
Query: 63 MNMEPYG-------------FHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH- 108
+PYG FH + H + GL A G GG +P+ G + H H
Sbjct: 150 FG-QPYGRSPSAVAAAAAAVFHQQ-HGGQQSPGLAALQSGGG-GGLEPYAGPQQNSHDHG 206
Query: 109 ----QHHPHFGGNFGGPDPGASCLHGGRLLGY--GGAAGGLGSQPPFAEGYEHMAESQGP 162
Q++ ++ P P + G GAA GS+PP + + S
Sbjct: 207 FPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSS---ASASSSS 263
Query: 163 ESFGPQRPGNLPDFHSSGASSHAVPAPCLP----LDQSPNRAASFHGLPSSSGSDSHSLE 218
SF QR G + S A P L SP+ A + G P S
Sbjct: 264 SSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSG----- 318
Query: 219 PRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPR 278
G D G A G DM S G AA GGA + P
Sbjct: 319 -------GPQD-------GGAGKGPADM--ASQCWGAAAAAAAAAAASGGAQQRSHHAPM 362
Query: 279 AAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLM 338
+ G G QP + PQ Q +G P
Sbjct: 363 SPGSSGGG---GQPLARTPQPSSPMDQ-------------------------MGKMRP-- 392
Query: 339 QPPQQAPPPPQQQPPQQPPQQ---QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ- 394
QP P QQQ P PQQ P P G + P P QG A + GGL
Sbjct: 393 QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYG-----SQTPQRYPMTMQGRAQSAMGGLSY 447
Query: 395 --------DGGPMLPSQHAQFEYPIHRLENRSMHPYSE-PVFSMQHPPPQQAPNQRLQHF 445
GP Q Q Y +S HP + P +S Q PP Q P+ +
Sbjct: 448 TQQIPPYGQQGPSGYGQQGQTPY----YNQQSPHPQQQQPPYSQQ--PPSQTPHAQ---- 497
Query: 446 DAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDS 505
P Y P + P PP
Sbjct: 498 --PSYQQ----------------------------------QPQSQPPQLQSSQPPYSQQ 521
Query: 506 FPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMAS-- 563
PS PP Q + S Q QQ Q Q Q Q Q QQQQ +Q A + Q A+
Sbjct: 522 -PSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYP 580
Query: 564 RNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAP 623
+ Q Q+ +Q +Q P P L+Q +F + S + Q+
Sbjct: 581 QPQSQQSQQTAYSQQRFP------------PPQELSQDSFGSQASSAPSMTSSKGGQEDM 628
Query: 624 HLAQESAWFSGPHPPPG-DLLPRRMGG--------SGLPADCG---------------PH 659
+L+ +S S P D LP G SG+ + G PH
Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPH 688
Query: 660 DPSL-APPPPPGGSGVLF----RGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQS 714
P + P P P GS GPL P +PG P PS G +
Sbjct: 689 LPGIRGPSPSPVGSPASVAQSRSGPL-SPAAVPGNQMPPRPPS------GQSDSIMHPSM 741
Query: 715 PGAGVGLPSAASERRPPPPDFATSALGGQPG---FPFGAAGRQSTPHSGPGVNSPPSAGG 771
+ + +R P P +++ QPG P +G Q H+G G S G
Sbjct: 742 NQSSIAQDRGYMQRNPQMPQYSSP----QPGSALSPRQPSGGQI--HTGMGSYQQNSMGS 795
Query: 772 GGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTA 831
G G G G YP QP++ + G G N + + GQ + T
Sbjct: 796 YGPQGGQYGPQGGYPRQPNYNALPNANYPSAG--MAGGINPMGAGGQMHGQPGIPPYGTL 853
Query: 832 CQNMI--ASLG----APNL-----NVTFNKKNPPEGKRKLSQNETDGAAVAGN------P 874
+ AS+G PN+ V PP G + +Q VA N P
Sbjct: 854 PPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPP 913
Query: 875 GSDYFPGGTAPGAPGPGGPSGTS-SSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDG- 932
G +P G G G P G +S + P PP GT + + + ++ G
Sbjct: 914 G---YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGL 970
Query: 933 -----KPVSGGGGRGRGRRKRDS---GHVSPGTFFDKYSAAPDSGGAP----GVSPGQQQ 980
P + + G K +S S T +K + + GG P V
Sbjct: 971 GDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAF 1030
Query: 981 ASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQP--DLIGSLDGGAKSDSSS 1038
A+G ++ P + S G + ++ +L +L+ G S ++S
Sbjct: 1031 TEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAAS 1090
Query: 1039 PNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKL-PPRGVGAGE-HGP 1096
+ YA E ++ D P + A+ S PK+ PP G+G GP
Sbjct: 1091 ----SLKKQYIQCLYAFECKIERGEDPPPDIFAAADSK--KSQPKIQPPSPAGSGSMQGP 1144
Query: 1097 KAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
+ P STS+ + GG P P + Q+
Sbjct: 1145 QTP----------QSTSSSMAEGGDLKPPTPASTPHSQI 1173
Score = 85.5 bits (210), Expect = 3e-16
Identities = 278/1302 (21%), Positives = 411/1302 (31%), Gaps = 271/1302 (20%)
Query: 3 GLDQFE-PQVNSRNAGQGERNFNETGLSMNTHFK-APAFHTGGPPG--PVDPAMSALGEP 58
GL+ + PQ NS + G +N + + + APA+ P G P A +A G
Sbjct: 191 GLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSK 250
Query: 59 PILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHP----------- 107
P P A S + AQ G GG P G+ P
Sbjct: 251 P-------PPSSSASASS---SSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT 300
Query: 108 -------HQHHPHFGGNF-GGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAES 159
+Q +P GG++ GGP G + + A + A G
Sbjct: 301 SPSSARGYQGYP--GGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSH 358
Query: 160 QGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE- 218
P S G G P + P P P+DQ +G G++ +S +
Sbjct: 359 HAPMSPGSSGGGGQPLART--------PQPSSPMDQMGKMRPQPYG-----GTNPYSQQQ 405
Query: 219 -PRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAG----RQVPGGAFPGA 273
P QG + YPG+ P +G+ G +Q+P G
Sbjct: 406 GPPSGPQQG------HGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGP 459
Query: 274 SAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGS 333
S + ++ P QQQP QQP Q +PS
Sbjct: 460 SGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPH-----------------AQPSY-Q 501
Query: 334 RHPLMQPPQ-QAPPPPQQQPPQQPPQQQPPPP-PGLLVRQNSCPPALPRPQQGEAGTPSG 391
+ P QPPQ Q+ PP Q P QPP QQ P P P P + P Q +A +P
Sbjct: 502 QQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQ 561
Query: 392 GLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYM 451
Q P + Q YP + + YS+ F PP + + + + P M
Sbjct: 562 QQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP---PPQELSQDSFGSQASSAPSM 618
Query: 452 NVAK------------RPRF--DFPGS---------------AGVDRCASWNGSMHNGAL 482
+K RP D GS +S G N A
Sbjct: 619 TSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPA- 677
Query: 483 DNHLSPSAYPGLPGEFTP-PVP----------------------DSFPSGPP------LQ 513
+ SP P LPG P P P + P PP +
Sbjct: 678 QSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIM 737
Query: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQR---- 569
HP+ + S+ Q + Q+ Q Q Q ++ + + M S Q
Sbjct: 738 HPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYG 797
Query: 570 ------------LRQPNLAQL-----------GHPGDVGQGGLVHGGPVGGLAQPNFERE 606
RQPN L G +G GG +HG P G+ P
Sbjct: 798 PQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP--GIP-PYGTLP 854
Query: 607 GGSTGAGRLGTFEQQAPHLAQESAWF-SGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAP 665
G +G P++A SG PPPG + R+ + + + P
Sbjct: 855 PGRMSHASMGN-RPYGPNMANMPPQVGSGMCPPPGGM-NRKTQETAVAMHVAANSIQNRP 912
Query: 666 PP-------------PPGGSGVLFRGPLQEPMRMP-GEGHVPALPSPGLQFGGSLGGLGQ 711
P PP G G+ + P P G A S G+ + GLG
Sbjct: 913 PGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGLGD 972
Query: 712 LQSPGA------GVGLPSAASERRPPPPDFATSA-------LGGQPGFPFGAAGRQS-TP 757
++ A G P S+ + T+ LGG+P + T
Sbjct: 973 VKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTE 1032
Query: 758 HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSK- 816
G+ + P+ G +P S ++G L+ + NK +
Sbjct: 1033 EKAMGMTNLPAVGR----------------KPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 817 -DNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPE----GKRKLSQNETDGAAVA 871
NL + +A S+ + I L A + + PP+ K SQ + + A
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 872 GNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGND 931
G+ GP P TSSS ++ P S P S S +
Sbjct: 1137 GSGSMQ-----------GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV 1185
Query: 932 GKPVSGGGGRGRGRRKRDSGHVSPG--------TFFDKYSAAPDS----------GGAPG 973
G + G +KR+S +PG + S P+ G P
Sbjct: 1186 GIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPF 1245
Query: 974 VSPGQ----------QQASGAAVGGSSAGETRGAP--TPHEKALTSPSWGKGAELLLG-D 1020
+S GQ +A+G +G + G + P P+++ T P G + G
Sbjct: 1246 MSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAP 1305
Query: 1021 QPDLIGS-LDGGAKSDSSSPNVGEFASDEVSTSYANE---DEVSSSSDNPQALVKASRSP 1076
QP+L+ S D G S S P + + SY N+ S S P +
Sbjct: 1306 QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQ 1365
Query: 1077 LVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSY 1118
SP PR + K+P G+ + P S+
Sbjct: 1366 QQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASH 1407
Score = 60.1 bits (144), Expect = 1e-08
Identities = 130/561 (23%), Positives = 180/561 (32%), Gaps = 112/561 (19%)
Query: 661 PSLAPPPPPG------------------GSGVLFRGPLQEPMRMPGEGHVPALPSPGLQF 702
P++ PP P G GSG GP EP G+ P+
Sbjct: 61 PAVGPPQPLGKELQDGAESNGGGGGGGAGSG---GGPGAEPDLKNSNGNAGPRPALNNNL 117
Query: 703 GGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAG----RQSTPH 758
GG G S G G SAA+ PP F G P AA +Q
Sbjct: 118 TEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFG-QPYGRSPSAVAAAAAAVFHQQHGGQ 176
Query: 759 SGPGVNSPPSAGGGGGSSGGG-------------------GGGGAYPPQPDFQPSQRTSA 799
PG+ + S GGGG G AYPP P+ S+
Sbjct: 177 QSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPP---APAYALSS 233
Query: 800 SKLG------ALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNP 853
+ G A + GS PSS S ++ S+ Q ++G +
Sbjct: 234 PRGGTPGSGAAAAAGSKPPPSS-----SASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQ 288
Query: 854 PEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPG----GPSGTSSSGSKASGPPNP 909
P L+Q T ++ G G +PGG G P G GP+ +S A+
Sbjct: 289 PTATPTLNQLLTSPSSARGYQG---YPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAA 345
Query: 910 PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG 969
A G + ++ + G+ SGGGG+ R + S SP K P G
Sbjct: 346 AAAASGGAQQRSHHAPMSPGS-----SGGGGQPLARTPQPS---SPMDQMGKMRPQP-YG 396
Query: 970 GAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLD 1029
G S Q SG G G+ G+ TP +T + A
Sbjct: 397 GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAM-------------- 442
Query: 1030 GGAKSDSSSPNVGEFA----SDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLP 1085
GG P G+ + T Y N+ S +PQ + P P
Sbjct: 443 GGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQ-----QSPHPQ----QQQPPYSQQPPSQT 493
Query: 1086 PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
P + + P++ PP L +S P P H +P + T+
Sbjct: 494 PHAQPSYQQQPQSQPPQL-------QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ--- 543
Query: 1146 PPDEIHPLEILQAQIQLQRQQ 1166
P P QAQ Q+QQ
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQ 564
Score = 57.4 bits (137), Expect = 9e-08
Identities = 107/440 (24%), Positives = 143/440 (32%), Gaps = 72/440 (16%)
Query: 721 LPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPP------------S 768
L A ++R A +A + G AAG++S GP V P +
Sbjct: 24 LKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQES---EGPAVGPPQPLGKELQDGAESN 80
Query: 769 AGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAAL 828
GGGGG +G GGG GA +PD + S +A AL+ P G +
Sbjct: 81 GGGGGGGAGSGGGPGA---EPDLKNS-NGNAGPRPALNNNLTEPPGGG----GGGSSDGV 132
Query: 829 STACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAP 888
+ A+L P P G+ + A G PG A +
Sbjct: 133 GAPPHSAAAALPPPAYGF-----GQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSG 187
Query: 889 GPGG--PSGTSSSGSKASGPPNP------PAQGDGTSLSPNYTLESTSGNDGKPVSGGGG 940
G GG P S G PN P + +P Y L S G G P SG
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRG--GTPGSGAAA 245
Query: 941 RGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTP 1000
+ S SA+ S S QQ GA GG + G P P
Sbjct: 246 AAGSKPPPSS------------SASASSSS----SSFAQQRFGAMGGGGPSAAGGGTPQP 289
Query: 1001 H-----EKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYAN 1055
+ LTSPS +G + G G GG + + + AS + A
Sbjct: 290 TATPTLNQLLTSPSSARGYQGYPG------GDYSGGPQDGGAGKGPADMASQCWGAAAAA 343
Query: 1056 EDEVSSSSDNPQALVKASRSPLVTGS-----PKLPPRGVGAGEHGPKAPPPALGLGIMSN 1110
++S Q A SP +G + P + G P P G S
Sbjct: 344 AAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQ 403
Query: 1111 STSTPDSYGGGGGPGHPGTP 1130
P G G G+PG P
Sbjct: 404 QQGPPS--GPQQGHGYPGQP 421
Score = 52.4 bits (124), Expect = 3e-06
Identities = 85/329 (25%), Positives = 116/329 (35%), Gaps = 82/329 (24%)
Query: 853 PPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQ 912
PP +K Q + + A GG A A +++G ++ GP P Q
Sbjct: 20 PPSELKKAEQQQREEA------------GGEAAAAAAAERGEMKAAAGQESEGPAVGPPQ 67
Query: 913 GDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAP 972
G L ES G G GG G G G PG D ++ ++G P
Sbjct: 68 PLGKELQDG--AESNGGGGG----GGAGSGGG----------PGAEPDLKNSNGNAGPRP 111
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLI------- 1025
++ + G GGSS G GAP PH A P G G P +
Sbjct: 112 ALNNNLTEPPGGGGGGSSDGV--GAP-PHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAV 168
Query: 1026 ---------------------GSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSD 1064
G L+ A +S + G F + + ++ Y N S+
Sbjct: 169 FHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHG-FPNHQYNSYYPNR-----SAY 222
Query: 1065 NPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTS-TPDSYG--GG 1121
P A A SP G+P G GA PPP+ S+S+S +G GG
Sbjct: 223 PPPAPAYALSSPR-GGTP-----GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGG 276
Query: 1122 GGPGHPG--------TPGLEQVRTPTSSS 1142
GGP G TP L Q+ T SS+
Sbjct: 277 GGPSAAGGGTPQPTATPTLNQLLTSPSSA 305
Score = 32.0 bits (71), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 1090 GAGEHGPKA-PPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
G GP PP LG + + S + GGGGG G G PG E ++ + P P
Sbjct: 55 GQESEGPAVGPPQPLGKELQDGAES--NGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRP 111
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 102 bits (253), Expect = 3e-21
Identities = 288/1172 (24%), Positives = 360/1172 (30%), Gaps = 229/1172 (19%)
Query: 43 GPPGPVDPAMS--ALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHG 100
GPPGP G+P G P ARG GL H + G G
Sbjct: 243 GPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPG--TPGLPGVKGHRGYPGLDGAKG 300
Query: 101 HPGSHHPHQHHPHFGGNFGGPDP-GASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAES 159
G+ G N G P P G L G R G G AG G A G +
Sbjct: 301 EAGAPGVKGESGSPGEN-GSPGPMGPRGLPGER--GRTGPAGAAG-----ARGNDGQPGP 352
Query: 160 QGPESFGPQRPGNLPDFHSS-GASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE 218
GP GP P P F + GA A P + P A G P + GS
Sbjct: 353 AGPP--GPVGPAGGPGFPGAPGAKGEAGPTGA----RGPEGAQGPRGEPGTPGSPG---- 402
Query: 219 PRRVTNQGAVDSL-----EYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGA 273
P + D + PG A + F P G P A G P G
Sbjct: 403 PAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP--GPRGPPG--PQGATGPLGP----KGQ 454
Query: 274 SAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGS 333
+ P AG G +P PQ P ++ + G AR P G+ P
Sbjct: 455 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRG--------ARGEPGGVGP---- 502
Query: 334 RHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGL 393
+ PP + P + P Q P PG + A P+ G+ G P
Sbjct: 503 ----IGPPGERGAPGNRGFPGQDGLAGPKGAPG---ERGPSGLAGPKGANGDPGRP---- 551
Query: 394 QDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPP--QQAPNQR-LQHFDAPPY 450
G P LP P + P P + PP Q A Q + F P
Sbjct: 552 --GEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKG 609
Query: 451 MN--VAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSF-- 506
N K PG+ G+ +G GA P+ G GE P P F
Sbjct: 610 ANGEPGKAGEKGLPGAPGLRGLPGKDGE--TGAAGPP-GPAGPAGERGEQGAPGPSGFQG 666
Query: 507 ---PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMAS 563
P GPP + P Q + + A ++
Sbjct: 667 LPGPPGPPGEGGKPGDQGVPGEA--------------------------GAPGLVGPRGE 700
Query: 564 RNQQQRLRQPNLAQL-------GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTGAGRL 615
R P L G PG G +G GP G P + G GA +
Sbjct: 701 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 760
Query: 616 GTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPS--------LAPPP 667
P + GP PG + GG GL GP P+ + PP
Sbjct: 761 A-----GPKGDRGDVGEKGPEGAPG-----KDGGRGLTGPIGPPGPAGANGEKGEVGPPG 810
Query: 668 PPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFG--GSLGGLGQLQSPGA-GVGLPSA 724
P G +G + PG P Q G G G GQ GA G PS
Sbjct: 811 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 870
Query: 725 ASERRPPP----PDFATSALG--GQPGFPFGAAGRQSTPHSG--PGVNSPPSAGGGGGSS 776
A + P P A A G G GFP GAAGR P S PG PP G G
Sbjct: 871 APGPQGPTGVTGPKGARGAQGPPGATGFP-GAAGRVGPPGSNGNPGPPGPPGPSGKDGPK 929
Query: 777 GGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G G G PP +P + A G + PS + G LA Q I
Sbjct: 930 GARGDSG--PPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAG-----QRGI 982
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSG 895
L F P G+ PG PG + G PGP GP G
Sbjct: 983 VGLPGQRGERGFPGLPGPSGE----------------PGKQGAPGASGDRGPPGPVGPPG 1026
Query: 896 TSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSP 955
+ GP P + E + G DG P G +G R +P
Sbjct: 1027 LT-------GPAGEPGR------------EGSPGADGPPGRDGAAGVKGDRGETGAVGAP 1067
Query: 956 GTFFDKYSAAPDSGGAPGVS--PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKG 1013
G AP G+PG + G+Q G A GA P PS G
Sbjct: 1068 G--------APGPPGSPGPAGPTGKQGDRGEA----------GAQGP-----MGPSGPAG 1104
Query: 1014 AELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKAS 1073
A + G Q G K ++ P T S + + +
Sbjct: 1105 ARGIQGPQGPR------GDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGD-----QGA 1153
Query: 1074 RSPLVTGSPKLPPRGVGA-------GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGH 1126
P P+ PP VG G GP PP G + P + G G PG
Sbjct: 1154 SGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGP 1213
Query: 1127 PGTPGLEQVRTPTSSSGAPPPDEIHPLEILQA 1158
PG PG++ PD PL+ ++A
Sbjct: 1214 PG-PGIDMSAFAGLGPREKGPD---PLQYMRA 1241
Score = 94.7 bits (234), Expect = 5e-19
Identities = 188/723 (26%), Positives = 227/723 (31%), Gaps = 115/723 (15%)
Query: 577 QLGHPGDVG----QGGLVHGGPVGGLAQPNFEREGGSTGA----GRLGTFEQQAPHLAQE 628
Q G PG G QG GP G P E G GA G +G A
Sbjct: 454 QTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPG 513
Query: 629 SAWF------SGPHPPPGDLLPRRMGG-SGLPADCG-PHDPSLAPPPPPGGSGVLFR--- 677
+ F +GP PG+ P + G G D G P +P L PG G+ R
Sbjct: 514 NRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGL-----PGARGLTGRPGD 568
Query: 678 -GPLQE--PMRMPGEGHVPALPSPG--------LQFGGSLGGLGQLQSPGAGVGLPSAAS 726
GP + P PGE P P P + F G G G+ G GLP A
Sbjct: 569 AGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEK-GLPGAPG 627
Query: 727 ERRPPPPDFATSALGGQ-PGFPFGAAGRQSTPHSG-----PGVNSPPSAGGGGGSSGGGG 780
R P D T A G P P G G Q P PG PP GG G G G
Sbjct: 628 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPG 687
Query: 781 GGGAY----PPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMI 836
GA P P +R S G D G S A A Q
Sbjct: 688 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA-QGPP 746
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSG 895
G P P + + + +GA PG D G T P G PGP G +G
Sbjct: 747 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGA-----PGKDGGRGLTGPIGPPGPAGANG 801
Query: 896 TSSSGSKASGPPNP---------PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRR 946
GPP P P + T G DG+P G +G +
Sbjct: 802 EKGE----VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQP-GAKGEQGEAGQ 856
Query: 947 KRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA-----AVGGSSAGETRGAP--- 998
K D+G P S AP G GV+ G + A GA A G A G P
Sbjct: 857 KGDAGAPGP----QGPSGAPGPQGPTGVT-GPKGARGAQGPPGATGFPGAAGRVGPPGSN 911
Query: 999 -TPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANED 1057
P PS G + GD G + P + A +D
Sbjct: 912 GNPGPPGPPGPSGKDGPKGARGDS---------GPPGRAGEPGLQGPAGPPGEKGEPGDD 962
Query: 1058 EVSSSSDNPQALVKASRSPLV--------TGSPKLP-----PRGVGA----GEHGPKAPP 1100
S + P A + +V G P LP P GA G+ GP P
Sbjct: 963 GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPV 1022
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP----PPDEIHPLEIL 1156
GL + S G G PG G G++ R T + GAP PP P
Sbjct: 1023 GPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGP---- 1078
Query: 1157 QAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELGSCCSEAVKSAMSTIDL 1216
Q + P+G G G G + E G +K L
Sbjct: 1079 AGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGL 1138
Query: 1217 DSL 1219
L
Sbjct: 1139 QGL 1141
Score = 81.3 bits (199), Expect = 6e-15
Identities = 155/605 (25%), Positives = 189/605 (31%), Gaps = 109/605 (18%)
Query: 593 GPVGGLAQPNFERE--GGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGS 650
GP G +P ++ G G G +Q P + G P G R G
Sbjct: 101 GPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRG-----RDGEP 155
Query: 651 GLPADCGPHDPSLAPPPPPG---------------GSGVLFRGPLQEPMRMPGEGHVPA- 694
G P + GP P PP PPG +G G +Q PM G P
Sbjct: 156 GTPGNPGPPGPP-GPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGP 214
Query: 695 LPSPGLQ-------------FGGSLGGLGQLQSPG-----AGVGLPSAASERRPPPPDFA 736
+PG Q G +G G PG G P A ER PP P A
Sbjct: 215 AGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGA 274
Query: 737 TSALGGQPGFPFGAAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPS 794
G PG P G G + P G P G GS G G G P P P
Sbjct: 275 -RGFPGTPGLP-GVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG--PMGPRGLPG 330
Query: 795 QRTSASKLGALSLGSFN---KPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKK 851
+R GA + P+ G + + GA +
Sbjct: 331 ERGRTGPAGAAGARGNDGQPGPAGPPGPVGPA-------GGPGFPGAPGAKGEAGPTGAR 383
Query: 852 NPPEGKRKLSQNETDG----AAVAGNPGSDYFPGGT-APGAPGPGGPSGTSSSGSKASGP 906
P + + T G A +GNPG+D PG + GAPG G G GP
Sbjct: 384 GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG----PRGP 439
Query: 907 PNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAP 966
P P QG L P G G+P G +G K + G P AP
Sbjct: 440 PGP--QGATGPLGP-------KGQTGEP-GIAGFKGEQGPKGEPGPAGP-------QGAP 482
Query: 967 DSGGAPGVSPGQQQASGAAVGGSSAGETRGAP----TPHEKALTSPSWGKGAELLLGDQP 1022
G G + + G VG RGAP P + L P G G
Sbjct: 483 GPAGEEGKRGARGEPGG--VGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSG--- 537
Query: 1023 DLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSP 1082
L G GA D P E A PQ V S +P G P
Sbjct: 538 -LAG--PKGANGDPGRPG-------EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRP 587
Query: 1083 KLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSS 1142
P G G + P +G + P G G PG PG GL T ++
Sbjct: 588 GPP------GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAA 641
Query: 1143 GAPPP 1147
G P P
Sbjct: 642 GPPGP 646
Score = 43.1 bits (100), Expect = 0.002
Identities = 85/320 (26%), Positives = 110/320 (34%), Gaps = 65/320 (20%)
Query: 883 TAPGAPGPGGPSGTSSSGSKASGPPNPPA-QGDGTSLSPNYTLESTSGNDGKPVSGGGGR 941
TA G PGP G G GP PP QG P G G P
Sbjct: 95 TASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGD-RGDKGEKGAP------- 146
Query: 942 GRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPH 1001
G R RD PGT P + G PG PG G +GG+ A + G
Sbjct: 147 --GPRGRDG---EPGT--------PGNPGPPG-PPGPPGPPG--LGGNFAAQMAGGFD-- 188
Query: 1002 EKALTSPSWGKGAELLLGDQPDLIGSLDG-GAKSDSSSPNVGEFASDEVSTSYANEDEVS 1060
EKA GA+L + P +G + G + +P F + E VS
Sbjct: 189 EKA-------GGAQLGVMQGP--MGPMGPRGPPGPAGAPGPQGFQGNP---GEPGEPGVS 236
Query: 1061 SSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGG 1120
P+ P G P + AGE GP P A G P + G
Sbjct: 237 GPM-GPRGPPGPPGKPGDDGEAGKPGK---AGERGPPGPQGARGF---------PGTPGL 283
Query: 1121 GGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGG 1180
G GH G PGL+ + +GAP ++ + + S P GL G
Sbjct: 284 PGVKGHRGYPGLDGAK---GEAGAPG---------VKGESGSPGENGSPGPMGPRGLPGE 331
Query: 1181 KKGECAVGASGAQNGDSELG 1200
+ GA+GA+ D + G
Sbjct: 332 RGRTGPAGAAGARGNDGQPG 351
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 102 bits (253), Expect = 3e-21
Identities = 288/1172 (24%), Positives = 360/1172 (30%), Gaps = 229/1172 (19%)
Query: 43 GPPGPVDPAMS--ALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHG 100
GPPGP G+P G P ARG GL H + G G
Sbjct: 174 GPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPG--TPGLPGVKGHRGYPGLDGAKG 231
Query: 101 HPGSHHPHQHHPHFGGNFGGPDP-GASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAES 159
G+ G N G P P G L G R G G AG G A G +
Sbjct: 232 EAGAPGVKGESGSPGEN-GSPGPMGPRGLPGER--GRTGPAGAAG-----ARGNDGQPGP 283
Query: 160 QGPESFGPQRPGNLPDFHSS-GASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE 218
GP GP P P F + GA A P + P A G P + GS
Sbjct: 284 AGPP--GPVGPAGGPGFPGAPGAKGEAGPTGA----RGPEGAQGPRGEPGTPGSPG---- 333
Query: 219 PRRVTNQGAVDSL-----EYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGA 273
P + D + PG A + F P G P A G P G
Sbjct: 334 PAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP--GPRGPPG--PQGATGPLGP----KGQ 385
Query: 274 SAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGS 333
+ P AG G +P PQ P ++ + G AR P G+ P
Sbjct: 386 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRG--------ARGEPGGVGP---- 433
Query: 334 RHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGL 393
+ PP + P + P Q P PG + A P+ G+ G P
Sbjct: 434 ----IGPPGERGAPGNRGFPGQDGLAGPKGAPG---ERGPSGLAGPKGANGDPGRP---- 482
Query: 394 QDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPP--QQAPNQR-LQHFDAPPY 450
G P LP P + P P + PP Q A Q + F P
Sbjct: 483 --GEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKG 540
Query: 451 MN--VAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSF-- 506
N K PG+ G+ +G GA P+ G GE P P F
Sbjct: 541 ANGEPGKAGEKGLPGAPGLRGLPGKDGE--TGAAGPP-GPAGPAGERGEQGAPGPSGFQG 597
Query: 507 ---PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMAS 563
P GPP + P Q + + A ++
Sbjct: 598 LPGPPGPPGEGGKPGDQGVPGEA--------------------------GAPGLVGPRGE 631
Query: 564 RNQQQRLRQPNLAQL-------GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTGAGRL 615
R P L G PG G +G GP G P + G GA +
Sbjct: 632 RGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGI 691
Query: 616 GTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPS--------LAPPP 667
P + GP PG + GG GL GP P+ + PP
Sbjct: 692 A-----GPKGDRGDVGEKGPEGAPG-----KDGGRGLTGPIGPPGPAGANGEKGEVGPPG 741
Query: 668 PPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFG--GSLGGLGQLQSPGA-GVGLPSA 724
P G +G + PG P Q G G G GQ GA G PS
Sbjct: 742 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 801
Query: 725 ASERRPPP----PDFATSALG--GQPGFPFGAAGRQSTPHSG--PGVNSPPSAGGGGGSS 776
A + P P A A G G GFP GAAGR P S PG PP G G
Sbjct: 802 APGPQGPTGVTGPKGARGAQGPPGATGFP-GAAGRVGPPGSNGNPGPPGPPGPSGKDGPK 860
Query: 777 GGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G G G PP +P + A G + PS + G LA Q I
Sbjct: 861 GARGDSG--PPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAG-----QRGI 913
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSG 895
L F P G+ PG PG + G PGP GP G
Sbjct: 914 VGLPGQRGERGFPGLPGPSGE----------------PGKQGAPGASGDRGPPGPVGPPG 957
Query: 896 TSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSP 955
+ GP P + E + G DG P G +G R +P
Sbjct: 958 LT-------GPAGEPGR------------EGSPGADGPPGRDGAAGVKGDRGETGAVGAP 998
Query: 956 GTFFDKYSAAPDSGGAPGVS--PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKG 1013
G AP G+PG + G+Q G A GA P PS G
Sbjct: 999 G--------APGPPGSPGPAGPTGKQGDRGEA----------GAQGP-----MGPSGPAG 1035
Query: 1014 AELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKAS 1073
A + G Q G K ++ P T S + + +
Sbjct: 1036 ARGIQGPQGPR------GDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGD-----QGA 1084
Query: 1074 RSPLVTGSPKLPPRGVGA-------GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGH 1126
P P+ PP VG G GP PP G + P + G G PG
Sbjct: 1085 SGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGP 1144
Query: 1127 PGTPGLEQVRTPTSSSGAPPPDEIHPLEILQA 1158
PG PG++ PD PL+ ++A
Sbjct: 1145 PG-PGIDMSAFAGLGPREKGPD---PLQYMRA 1172
Score = 94.7 bits (234), Expect = 5e-19
Identities = 188/723 (26%), Positives = 227/723 (31%), Gaps = 115/723 (15%)
Query: 577 QLGHPGDVG----QGGLVHGGPVGGLAQPNFEREGGSTGA----GRLGTFEQQAPHLAQE 628
Q G PG G QG GP G P E G GA G +G A
Sbjct: 385 QTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPG 444
Query: 629 SAWF------SGPHPPPGDLLPRRMGG-SGLPADCG-PHDPSLAPPPPPGGSGVLFR--- 677
+ F +GP PG+ P + G G D G P +P L PG G+ R
Sbjct: 445 NRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGL-----PGARGLTGRPGD 499
Query: 678 -GPLQE--PMRMPGEGHVPALPSPG--------LQFGGSLGGLGQLQSPGAGVGLPSAAS 726
GP + P PGE P P P + F G G G+ G GLP A
Sbjct: 500 AGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEK-GLPGAPG 558
Query: 727 ERRPPPPDFATSALGGQ-PGFPFGAAGRQSTPHSG-----PGVNSPPSAGGGGGSSGGGG 780
R P D T A G P P G G Q P PG PP GG G G G
Sbjct: 559 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPG 618
Query: 781 GGGAY----PPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMI 836
GA P P +R S G D G S A A Q
Sbjct: 619 EAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGA-QGPP 677
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSG 895
G P P + + + +GA PG D G T P G PGP G +G
Sbjct: 678 GLQGMPGERGAAGIAGPKGDRGDVGEKGPEGA-----PGKDGGRGLTGPIGPPGPAGANG 732
Query: 896 TSSSGSKASGPPNP---------PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRR 946
GPP P P + T G DG+P G +G +
Sbjct: 733 EKGE----VGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQP-GAKGEQGEAGQ 787
Query: 947 KRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA-----AVGGSSAGETRGAP--- 998
K D+G P S AP G GV+ G + A GA A G A G P
Sbjct: 788 KGDAGAPGP----QGPSGAPGPQGPTGVT-GPKGARGAQGPPGATGFPGAAGRVGPPGSN 842
Query: 999 -TPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANED 1057
P PS G + GD G + P + A +D
Sbjct: 843 GNPGPPGPPGPSGKDGPKGARGDS---------GPPGRAGEPGLQGPAGPPGEKGEPGDD 893
Query: 1058 EVSSSSDNPQALVKASRSPLV--------TGSPKLP-----PRGVGA----GEHGPKAPP 1100
S + P A + +V G P LP P GA G+ GP P
Sbjct: 894 GPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPV 953
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP----PPDEIHPLEIL 1156
GL + S G G PG G G++ R T + GAP PP P
Sbjct: 954 GPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGP---- 1009
Query: 1157 QAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELGSCCSEAVKSAMSTIDL 1216
Q + P+G G G G + E G +K L
Sbjct: 1010 AGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGL 1069
Query: 1217 DSL 1219
L
Sbjct: 1070 QGL 1072
Score = 83.2 bits (204), Expect = 2e-15
Identities = 165/635 (25%), Positives = 199/635 (31%), Gaps = 130/635 (20%)
Query: 564 RNQQQRLRQPN-LAQLGHPGDVGQ--GGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQ 620
R Q Q +RQP Q G PGD+ G GP G + + G G E+
Sbjct: 22 RCQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKG-------EK 74
Query: 621 QAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPG---------- 670
AP GP R G G P + GP P PP PPG
Sbjct: 75 GAP----------GPRG--------RDGEPGTPGNPGPPGPP-GPPGPPGLGGNFAAQMA 115
Query: 671 -----GSGVLFRGPLQEPMRMPGEGHVPA-LPSPGLQ-------------FGGSLGGLGQ 711
+G G +Q PM G P +PG Q G +G G
Sbjct: 116 GGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGP 175
Query: 712 LQSPG-----AGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTP--HSGPGVN 764
PG G P A ER PP P A G PG P G G + P G
Sbjct: 176 PGPPGKPGDDGEAGKPGKAGERGPPGPQGA-RGFPGTPGLP-GVKGHRGYPGLDGAKGEA 233
Query: 765 SPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFN---KPSSKDNLFG 821
P G GS G G G P P P +R GA + P+ G
Sbjct: 234 GAPGVKGESGSPGENGSPG--PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG 291
Query: 822 QSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG----AAVAGNPGSD 877
+ + GA + P + + T G A +GNPG+D
Sbjct: 292 PA-------GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 344
Query: 878 YFPGGT-APGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVS 936
PG + GAPG G G GPP P QG L P G G+P
Sbjct: 345 GIPGAKGSAGAPGIAGAPGFPG----PRGPPGP--QGATGPLGP-------KGQTGEP-G 390
Query: 937 GGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRG 996
G +G K + G P AP G G + + G VG RG
Sbjct: 391 IAGFKGEQGPKGEPGPAGP-------QGAPGPAGEEGKRGARGEPGG--VGPIGPPGERG 441
Query: 997 AP----TPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTS 1052
AP P + L P G G L G GA D P E
Sbjct: 442 APGNRGFPGQDGLAGPKGAPGERGPSG----LAG--PKGANGDPGRPG-------EPGLP 488
Query: 1053 YANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNST 1112
A PQ V S +P G P P G G + P +G +
Sbjct: 489 GARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP------GPQGARGQPGVMGFPGPKGAN 542
Query: 1113 STPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
P G G PG PG GL T ++G P P
Sbjct: 543 GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGP 577
Score = 60.5 bits (145), Expect = 1e-08
Identities = 110/459 (23%), Positives = 139/459 (30%), Gaps = 87/459 (18%)
Query: 712 LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGG 771
L+ G V P ++ P G PG P G AG Q P G A G
Sbjct: 21 LRCQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPG-PQGPAGEQG-PRGDRGDKGEKGAPG 78
Query: 772 GGGSSG-GGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALST 830
G G G G PP P P A G F++ + A
Sbjct: 79 PRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG----------GAQLG 128
Query: 831 ACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTA-PGAPG 889
Q + +G + PP AG PG F G PG PG
Sbjct: 129 VMQGPMGPMG---------PRGPP--------------GPAGAPGPQGFQGNPGEPGEPG 165
Query: 890 PGGPSGTSSSGSKASGPPNPPAQ-GDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKR 948
GP G GPP PP + GD + +G GK G +G R
Sbjct: 166 VSGPMG-------PRGPPGPPGKPGD----------DGEAGKPGKAGERGPPGPQGARGF 208
Query: 949 DSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSP 1008
PG + D +PG + SG+ S G P E+ T P
Sbjct: 209 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGP 268
Query: 1009 SWGKGAELLLGD-----QPDLIGSLDG-------GAKSDSS-----SPNVGEFASDEVST 1051
+ GA G P +G G GAK ++ P + E T
Sbjct: 269 AGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGT 328
Query: 1052 SYANEDEVSSSSDNPQALVKASRS---PLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIM 1108
+ +S + + A S P + G+P P G GP P A G
Sbjct: 329 PGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP------GPRGPPGPQGATGPLGP 382
Query: 1109 SNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
T P G G G G PG P GAP P
Sbjct: 383 KGQTGEPGIAGFKGEQGPKGEPG------PAGPQGAPGP 415
Score = 38.1 bits (87), Expect = 0.056
Identities = 82/315 (26%), Positives = 107/315 (33%), Gaps = 65/315 (20%)
Query: 888 PGPGGPSGTSSSGSKASGPPNPPA-QGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRR 946
PGP G G GP PP QG P G G P G R
Sbjct: 31 PGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGD-RGDKGEKGAP---------GPR 80
Query: 947 KRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALT 1006
RD PGT P + G PG PG G +GG+ A + G EKA
Sbjct: 81 GRDG---EPGT--------PGNPGPPG-PPGPPGPPG--LGGNFAAQMAGGFD--EKA-- 122
Query: 1007 SPSWGKGAELLLGDQPDLIGSLDG-GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDN 1065
GA+L + P +G + G + +P F + E VS
Sbjct: 123 -----GGAQLGVMQGP--MGPMGPRGPPGPAGAPGPQGFQGNP---GEPGEPGVSGPM-G 171
Query: 1066 PQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPG 1125
P+ P G P + AGE GP P A G P + G G G
Sbjct: 172 PRGPPGPPGKPGDDGEAGKPGK---AGERGPPGPQGARGF---------PGTPGLPGVKG 219
Query: 1126 HPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGEC 1185
H G PGL+ + +GAP ++ + + S P GL G +
Sbjct: 220 HRGYPGLDGAK---GEAGAPG---------VKGESGSPGENGSPGPMGPRGLPGERGRTG 267
Query: 1186 AVGASGAQNGDSELG 1200
GA+GA+ D + G
Sbjct: 268 PAGAAGARGNDGQPG 282
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 97.1 bits (240), Expect = 1e-19
Identities = 152/603 (25%), Positives = 193/603 (32%), Gaps = 58/603 (9%)
Query: 571 RQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQES 629
RQ LG PG G G + G + P ER G TG G+ G A+ +
Sbjct: 720 RQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER--GPTGPRGQRGPRGATGKSGAKGT 777
Query: 630 AWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPG 688
+ GPH PPG+ LP G +G P GP P PPG G+ + + G
Sbjct: 778 SGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------PGPPGKDGLPGHPGQRGEVGFQG 830
Query: 689 EGHVPALPSPGLQFG--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGF 746
+ P P G G G +G+ PG P + P G PG
Sbjct: 831 KTGPPGPPGVVGPQGAAGETGPMGERGHPG-----PPGPPGEQGLPGTAGKEGTKGDPGP 885
Query: 747 PFGAAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGA 804
P GA G+ PG P GG G G G G PP P P +R +A G
Sbjct: 886 P-GAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG--PPGPAGSPGERGAAGSGGP 942
Query: 805 LSLGSFNKPSSKDNLFGQSCLAALS-----TACQNMIASLGAPNLNVTFNKKNPPEGKRK 859
+ P G+ + T + +G P P G
Sbjct: 943 IGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPG----------PAGPPG 992
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSL 918
++ + D V G+PG G G PGP GP G A P A+G
Sbjct: 993 VAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1051
Query: 919 SPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSP----GTFFDKYSAAPDSGGAP 972
E T G +G P G G G K ++G V P G + A P+ P
Sbjct: 1052 GAKGD-EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGP 1110
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIG--SLDG 1030
PG G GE+ E + P +G + G QP G G
Sbjct: 1111 QGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESG-QPGEPGPPGPKG 1169
Query: 1031 GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG 1090
D N G D P+ A G P P
Sbjct: 1170 PTGDDGPKGNPGPVGFPG--------DPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1221
Query: 1091 AGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GE+GP P G S G G PG G PG P +G P PD +
Sbjct: 1222 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGL 1281
Query: 1151 HPL 1153
L
Sbjct: 1282 RGL 1284
Score = 87.4 bits (215), Expect = 8e-17
Identities = 292/1162 (25%), Positives = 364/1162 (31%), Gaps = 265/1162 (22%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHP 102
GPPG A G GM +P RG L GL + H G Q G P
Sbjct: 443 GPPGKAGRRGRA-GADGARGMPGDPGVKGDRGFDGLP--GLPGEKGHRGDTGAQGLPGPP 499
Query: 103 GSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGP 162
G G PG S G LLG G G G PP G M QGP
Sbjct: 500 GEDGERGDDGEIGPR---GLPGESGPRG--LLGPKGPPGIPG--PPGVRG---MDGPQGP 549
Query: 163 E-SFGPQ-RPGNLPDFHSSGASSHAVPAPCLPL----DQSPNRAASFHGLPSSSGSDSHS 216
+ S GPQ PG P + +P P + ++ P G+P S G H
Sbjct: 550 KGSLGPQGEPG--PPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH- 606
Query: 217 LEPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASA 275
PG E P G PS +G L +PG
Sbjct: 607 -------------------PGKEGPPGTKGNQGPSGPQGPL------------GYPGPRG 635
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRH 335
+ G+ GL K H + ++ + G F F G +G++ G R
Sbjct: 636 VKGVDGIRGL-KGH--------------KGEKGEDG--FPGFKG----DIGVK---GDRG 671
Query: 336 PLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQD 395
+ P + P+ + P P PP + + P LP G G P G L
Sbjct: 672 EVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPG-YPGRQG-PKGSL-- 727
Query: 396 GGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAK 455
G P P A E L +S P ++ P
Sbjct: 728 GFPGFPG--ASGEKGARGLSGKS------------GPRGERGPTG--------------- 758
Query: 456 RPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPS-----GP 510
PR G G +G+ D P GLPG P P+ FP GP
Sbjct: 759 -PR----GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG---PQGPNGFPGPKGPPGP 810
Query: 511 PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRL 570
P + P H Q+ + Q + Q AA M R
Sbjct: 811 PGKDGLPGHPG--------QRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 862
Query: 571 RQPNLAQLGHPGDVGQGGLVHG-GPVGGLAQPN------FEREGGSTG-AGRLGTFEQQA 622
P + G PG G+ G GP G + F E G G AG G +
Sbjct: 863 GPPG--EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEG 920
Query: 623 PHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPP--PPGGSGVLF---- 676
P SGP P G R GSG GP P P P PPG +G
Sbjct: 921 P---------SGPPGPAGSPGERGAAGSG-----GPIGPPGRPGPQGPPGAAGEKGVPGE 966
Query: 677 RGPL--------QEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASER 728
+GP+ Q P+ +PG PA P PG+ G G G++ PG G E
Sbjct: 967 KGPIGPTGRDGVQGPVGLPG----PAGP-PGV--AGEDGDKGEVGDPGQK-GTKGNKGEH 1018
Query: 729 RPPPPDFATSALG--------GQPGFP-----FGAAGRQSTPHSGPGVNSPPSAGGGGGS 775
PP P +G G+PG FGA G + T G N PP G G
Sbjct: 1019 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTR----GFNGPPGPIGLQGL 1074
Query: 776 SGGGGG----GGAYPPQPDFQPSQRTSASKLGALS-------LGSFNKPSSKDNLFGQSC 824
G G G P P P R A GA +G+ P K G+S
Sbjct: 1075 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP-GESG 1133
Query: 825 LAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGG 882
+ + G + + PP K T GNPG FPG
Sbjct: 1134 SPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPK-----GPTGDDGPKGNPGPVGFPGD 1188
Query: 883 TAPGAPGPGGPSGTSSS-GSKAS-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGG 940
PG PG GGP G + G + G P P T + G G P S G
Sbjct: 1189 --PGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1246
Query: 941 RGRGRRKRDSGHVSPGTFFDKYSAAPDSG-------GAPGVSPGQQQASGAAVGGSSAGE 993
G+G + +PG A P G PG S GQQ GA AG
Sbjct: 1247 GGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG-SVGQQGRPGAT---GQAGP 1302
Query: 994 TRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSL----DGGAKSDSSSPNVGEFASDEV 1049
P L + KG + P LIG + + G K D P
Sbjct: 1303 PGPVGPPGLPGLRGDAGAKGEK----GHPGLIGLIGPPGEQGEKGDRGLPG--------- 1349
Query: 1050 STSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMS 1109
S + + + P+ G P P G GPK A G G
Sbjct: 1350 --------PQGSPGQKGEMGIPGASGPIGPGGPPGLP-----GPAGPKGAKGATGPG--- 1393
Query: 1110 NSTSTPDSYGGGGGPGHPGTPG 1131
G G PGHPG PG
Sbjct: 1394 ---GPKGEKGVQGPPGHPGPPG 1412
Score = 87.0 bits (214), Expect = 1e-16
Identities = 237/941 (25%), Positives = 301/941 (31%), Gaps = 176/941 (18%)
Query: 327 LEPSVGSRH-PLMQPPQQAPPPPQQQPP-------QQPPQQQPPPPPGLLVRQNSCPPAL 378
LE G R P Q P +A PQQQP Q+P Q P P + ++S P L
Sbjct: 226 LECEGGQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPL 285
Query: 379 ------PRPQQGEAGTPS---GGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSM 429
PR +GE G P+ G+ GP P A P N P +P
Sbjct: 286 EEAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPG--PVGDP---G 340
Query: 430 QHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDR---CASWNGSMHNGALDNHL 486
+ PP +A PP ++ RF GS G D+ A+ L
Sbjct: 341 ERGPPGRAGLPGSDGAPGPPGTSLMLPFRF---GSGGGDKGPVVAAQEAQAQAILQQARL 397
Query: 487 SPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQ 546
+ PG G P P P P L+ + D Q + Q + ++
Sbjct: 398 ALRGPPGPMGYTGRPGPLGQPGSPGLKGESGD------LGPQGPRGPQGLTGPPGKAGRR 451
Query: 547 QQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGHPGDVGQGGLVHGGPVGGLAQPNFER 605
+ A M + + P L + GH GD G GL GP G + +
Sbjct: 452 GRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGL--PGPPGEDGERGDDG 509
Query: 606 EGGSTG----AGRLGTFEQQAPHLAQES---AWFSGPHPPPGDLLPR----------RMG 648
E G G +G G + P GP P G L P+ G
Sbjct: 510 EIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPG 569
Query: 649 GSGLPAD---CGPHD-------------PSLAPPP-------PPGGSGVLFRGPLQEPMR 685
GLP GPH P PP PPG G Q P+
Sbjct: 570 TQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLG 629
Query: 686 MPG-------------EGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPP 732
PG +GH G F G G +G ++ VG+P + E P
Sbjct: 630 YPGPRGVKGVDGIRGLKGHKGEKGEDG--FPGFKGDIG-VKGDRGEVGVPGSRGEDGPEG 686
Query: 733 PDFATSALG--------------GQPGFPFGAAGRQSTPHS-----GPGVNSPPSAGGGG 773
P T G G PG P G GRQ S PG + A G
Sbjct: 687 PKGRTGPTGDPGPPGLMGEKGKLGVPGLP-GYPGRQGPKGSLGFPGFPGASGEKGARGLS 745
Query: 774 GSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQ 833
G SG G G P P Q R + K GA + P G
Sbjct: 746 GKSGPRGERG--PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLP---------- 793
Query: 834 NMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSD---YFPGGTA-PGAPG 889
G N K PP K DG + G+PG F G T PG PG
Sbjct: 794 ------GPQGPNGFPGPKGPPGPPGK------DG--LPGHPGQRGEVGFQGKTGPPGPPG 839
Query: 890 PGGPSG----TSSSGSKA-SGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRG 944
GP G T G + GPP PP + L E T G+ G P + G G
Sbjct: 840 VVGPQGAAGETGPMGERGHPGPPGPPGE---QGLPGTAGKEGTKGDPGPPGAPGKDGPAG 896
Query: 945 RRKRDSGHVSPGTFFD---KYSAAPDSGGAPGVSPGQQQA--SGAAVGGSSAGETRGAP- 998
R PGT K + P P SPG++ A SG +G +G P
Sbjct: 897 LRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPG 956
Query: 999 ------TPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTS 1052
P EK P+ G + +G P G G A D VG+ + T
Sbjct: 957 AAGEKGVPGEKGPIGPTGRDGVQGPVG-LPGPAGP-PGVAGEDGDKGEVGD--PGQKGTK 1012
Query: 1053 YANEDEVSSSSDNPQALVKASRSPLVTGSP--KLPPRGVGA----GEHGPKAPPPALGLG 1106
+ P V + G P + P GA G G PP +GL
Sbjct: 1013 GNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQ 1072
Query: 1107 IMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
+ + G G G PG PG R P +GA P
Sbjct: 1073 GLPGPSGEKGETGDVGPMGPPGPPG---PRGPAGPNGADGP 1110
Score = 85.5 bits (210), Expect = 3e-16
Identities = 159/615 (25%), Positives = 192/615 (31%), Gaps = 116/615 (18%)
Query: 579 GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTG----AGRLGTFEQQAPHLAQESAWFS 633
G PG VG QG GP+G P G G AG+ GT P A +
Sbjct: 836 GPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA 895
Query: 634 GPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG-PLQEPMRMPGEGH 691
G PG+ LP GG GL + GP P P PG G G P+ P R +G
Sbjct: 896 GLRGFPGERGLPGTAGGPGLKGNEGPSGPP-GPAGSPGERGAAGSGGPIGPPGRPGPQGP 954
Query: 692 VPALPSPGLQFGGSLGGLGQLQSPGAG--VGLPSAASERRPPPPDFATSALGGQPGFPFG 749
A G+ G G +G G VGLP A PP G+ G P G
Sbjct: 955 PGAAGEKGVP--GEKGPIGPTGRDGVQGPVGLPGPAG----PPGVAGEDGDKGEVGDP-G 1007
Query: 750 AAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF----QPSQRTSASKLG 803
G + H PG P G G++G G GA PQ F R G
Sbjct: 1008 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPG 1067
Query: 804 ALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQN 863
+ L PS + G + +G P PP + N
Sbjct: 1068 PIGLQGLPGPSGEKGETGD-------------VGPMGPPG---------PPGPRGPAGPN 1105
Query: 864 ETDGA-------------AVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSSGSKAS--GPP 907
DG G PG PG PG GP G G + GPP
Sbjct: 1106 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPP 1165
Query: 908 NP--PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHV-------SPGTF 958
P P DG +P G+ G P GG RG+ K D G SPG
Sbjct: 1166 GPKGPTGDDGPKGNPGPV--GFPGDPGPP-GEGGPRGQDGAKGDRGEDGEPGQPGSPGPT 1222
Query: 959 FDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLL 1018
+ P P SPG + G G + G+ P + P+ G
Sbjct: 1223 GENGPPGPLGKRGPAGSPGSEGRQG---GKGAKGDPGAIGAPGKTGPVGPAGPAGKP--- 1276
Query: 1019 GDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLV 1078
PD + L G +VG+ P A +A P
Sbjct: 1277 --GPDGLRGLPG---------SVGQ-------------------QGRPGATGQAG-PPGP 1305
Query: 1079 TGSPKLPPRGVGAGEHGPKAPPPALGL------GIMSNSTSTPDSYGGGGGPGHPGTPGL 1132
G P LP AG G K P +GL P G G G G PG
Sbjct: 1306 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGA 1365
Query: 1133 EQVRTPTSSSGAPPP 1147
P G P P
Sbjct: 1366 SGPIGPGGPPGLPGP 1380
Score = 79.7 bits (195), Expect = 2e-14
Identities = 246/1018 (24%), Positives = 319/1018 (31%), Gaps = 205/1018 (20%)
Query: 82 GLQAQP-VHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAA 140
G+ P V G G Q P GS P Q P G G PG L G + GA
Sbjct: 533 GIPGPPGVRGMDGPQGPK----GSLGP-QGEPGPPGQQG--TPGTQGLPGPQ-----GAI 580
Query: 141 GGLGSQPPFAE-GYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCL--PLDQSP 197
G G + P + G M S GP P PG + G + P L P +
Sbjct: 581 GPHGEKGPQGKPGLPGMPGSDGP----PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGV 636
Query: 198 NRAASFHGLPSSSGSDSHSLEPRRVTNQGAV-DSLEYNYPG----EAPSGHFDMFSPSDS 252
GL G P + G D E PG + P G P+
Sbjct: 637 KGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGD 696
Query: 253 EGQ--------------LPHYAAGRQVPGGA-----FPGASAMPRAAGMVGLSKMHAQPP 293
G LP Y GRQ P G+ FPGAS A G+ G S +
Sbjct: 697 PGPPGLMGEKGKLGVPGLPGYP-GRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 755
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQP- 352
P+ Q+ P+ + G P G G + P P + PP P +
Sbjct: 756 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDG 815
Query: 353 -PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPS 402
P P Q+ PP PPG++ Q + P ++G G P + G P
Sbjct: 816 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAG 875
Query: 403 QHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFP 462
+ + P P AP + D P + FP
Sbjct: 876 KEG----------------------TKGDPGPPGAPGK-----DGPAGLR-------GFP 901
Query: 463 GSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPA-PDHQS 521
G G+ A G L + PS PG G +P + SG P+ P P Q
Sbjct: 902 GERGLPGTAGGPG------LKGNEGPSGPPGPAG--SPGERGAAGSGGPIGPPGRPGPQG 953
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHP 581
++ ++ + Q +A + + ++G P
Sbjct: 954 PPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK-------GEVGDP 1006
Query: 582 GDVGQGGLV--HG-----GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFS 633
G G G HG GP+G + QP G GA G G F + + + F+
Sbjct: 1007 GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGD---EGTRGFN 1063
Query: 634 GPHPPPG-DLLPRRMGGSGLPADCGPHDPSLAPPP--------------PPGGSGVLFRG 678
GP P G LP G G D GP P P P PPGG G L G
Sbjct: 1064 GPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL--G 1121
Query: 679 PLQEPMRMPGEGHVPALPS-PGLQFG----GSLGGLGQLQSPGAG--------------- 718
P E PGE P + PG++ G G GQ PG
Sbjct: 1122 PPGEKGE-PGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNP 1180
Query: 719 -----VGLPSAASERRPPPPDFATSALG-----GQPGFP-----------FGAAGRQSTP 757
G P E P D A G GQPG P G G +P
Sbjct: 1181 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1240
Query: 758 HS-----GPGVNSPPSAGGGGGSSGG-GGGGGAYPPQPDFQ---PSQRTSASKLGALSLG 808
S G G P A G G +G G G A P PD P + GA
Sbjct: 1241 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1300
Query: 809 SFNKPSSKDNLFGQSCLAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
P L G A +I +G P + P + Q
Sbjct: 1301 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEM 1360
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLES 926
G A P PGG PG PGP GP G A+GP P + ++
Sbjct: 1361 GIPGASGPIG---PGGP-PGLPGPAGPKGAKG----ATGPGGPKGEKG---------VQG 1403
Query: 927 TSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
G+ G P K+ V + A P +GGAPG G ++ G+
Sbjct: 1404 PPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP-TGGAPGSPGGLEEIFGS 1460
Score = 70.9 bits (172), Expect = 8e-12
Identities = 175/740 (23%), Positives = 232/740 (31%), Gaps = 151/740 (20%)
Query: 510 PPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQ--- 566
P Q P +S QQQ + + Q Q+ Q Q ++++ +++ L + A+
Sbjct: 236 PQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGL 295
Query: 567 -----QQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG-AGRLGTFEQ 620
+ + +P + G PG G GL+ GP G P + G G GR G
Sbjct: 296 KGEKGEPAVLEPGMLVEGPPGPEGPAGLI--GPPGIQGNPGPVGDPGERGPPGRAGL--- 350
Query: 621 QAPHLAQESAWFSGPHPPPGD--LLPRRMGGSGLPADCGP-------------HDPSLAP 665
G PPG +LP R G G D GP LA
Sbjct: 351 ---------PGSDGAPGPPGTSLMLPFRFGSGG--GDKGPVVAAQEAQAQAILQQARLAL 399
Query: 666 PPPPGGSGVLFR-GPLQEPMRMPGEGHVPALPSPGLQ-FGGSLGGLGQLQSPGAGVGLPS 723
PPG G R GPL +P SPGL+ G LG G + P G P
Sbjct: 400 RGPPGPMGYTGRPGPLGQP------------GSPGLKGESGDLGPQGP-RGPQGLTGPPG 446
Query: 724 AASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGG 783
A R D A G PG P G G + G + P G G G G G
Sbjct: 447 KAGRRGRAGADGAR----GMPGDP-GVKGDR-------GFDGLPGLPGEKGHRGDTGAQG 494
Query: 784 AYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPN 843
P P + +R ++G L + P L G G P
Sbjct: 495 L--PGPPGEDGERGDDGEIGPRGLPGESGPR---GLLGPK-------------GPPGIPG 536
Query: 844 LNVTFNKKNPPEGKRKLS-QNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGS- 901
P K L Q E G PG+ PG GA GP G G
Sbjct: 537 PPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPG--PQGAIGPHGEKGPQGKPGL 594
Query: 902 ----KASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG-----GGRGRGRRKRDSGH 952
+ GPP P + N G G P G G RG K + G
Sbjct: 595 PGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGE 654
Query: 953 VSPGTFFDKYSAAPDSG--GAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSW 1010
F D G G PG S G+ G K T P+
Sbjct: 655 DGFPGFKGDIGVKGDRGEVGVPG-SRGEDGPEG------------------PKGRTGPTG 695
Query: 1011 GKGAELLLGDQPDL-IGSLDG-----GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSD 1064
G L+G++ L + L G G K P + ++ + + + +
Sbjct: 696 DPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKS--GPRGE 753
Query: 1065 NPQALVKASRSPL-VTGSPKLPPRGVGAGEHGP---KAPPPALGLGIMSNSTSTPDSYGG 1120
+ R P TG G G HGP + P G P G
Sbjct: 754 RGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGK 813
Query: 1121 GGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG- 1179
G PGHPG G + T G PP + P Q + E P+G +G
Sbjct: 814 DGLPGHPGQRGEVGFQGKTGPPG--PPGVVGP-------------QGAAGETGPMGERGH 858
Query: 1180 ----GKKGECAVGASGAQNG 1195
G GE + + + G
Sbjct: 859 PGPPGPPGEQGLPGTAGKEG 878
Score = 40.4 bits (93), Expect = 0.011
Identities = 97/381 (25%), Positives = 122/381 (32%), Gaps = 73/381 (19%)
Query: 37 PAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQ 96
P GPPGP PA +G P I G N P G G + P G
Sbjct: 307 PGMLVEGPPGPEGPA-GLIGPPGIQG-NPGPVG----------DPGERGPPGRAGLPGSD 354
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPDPGA------SCLHGGRL--------LGYGGAAGG 142
G PG+ GG GP A + L RL +GY G G
Sbjct: 355 GAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGP 414
Query: 143 LGSQP--PFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA 200
LG QP P +G QGP GPQ P + A A +P D
Sbjct: 415 LG-QPGSPGLKGESGDLGPQGPR--GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGD 471
Query: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHY 259
F GLP G H D+ PG P G +G++ P
Sbjct: 472 RGFDGLPGLPGEKGH-----------RGDTGAQGLPG--PPGE---DGERGDDGEIGPRG 515
Query: 260 AAGRQVPGGAF--PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF 317
G P G G +P G+ G+ PQ + P QQ
Sbjct: 516 LPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGT-------- 567
Query: 318 SGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPA 377
G + +P G + ++G P + P + P P PP PG PP
Sbjct: 568 PGTQGLP-GPQGAIG-------PHGEKGPQGKPGLPGMPGSDGPPGHPG-----KEGPPG 614
Query: 378 LPRPQQGEAGTPSGGLQDGGP 398
+ QG +G P G L GP
Sbjct: 615 -TKGNQGPSG-PQGPLGYPGP 633
Score = 32.0 bits (71), Expect = 4.0
Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 17/157 (10%)
Query: 1056 EDEVSSSSDNPQALVKASRSPLVTGSPK-----LPPRGVGAGEHGPKAPPPALGL-GIMS 1109
E+E+ SS P L +A+ P K L P + G GP+ P +G GI
Sbjct: 273 EEEILESSLLPP-LEEAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQG 331
Query: 1110 NSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSS-------GAPPPDEIHPLEILQAQIQL 1162
N D G G PG G PG + P +S G+ D+ + +AQ Q
Sbjct: 332 NPGPVGDP-GERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQA 390
Query: 1163 QRQQFSISEDQPLGLKG--GKKGECAVGASGAQNGDS 1197
QQ ++ P G G G+ G S G+S
Sbjct: 391 ILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGES 427
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 97.1 bits (240), Expect = 1e-19
Identities = 152/603 (25%), Positives = 193/603 (32%), Gaps = 58/603 (9%)
Query: 571 RQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQES 629
RQ LG PG G G + G + P ER G TG G+ G A+ +
Sbjct: 699 RQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER--GPTGPRGQRGPRGATGKSGAKGT 756
Query: 630 AWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPG 688
+ GPH PPG+ LP G +G P GP P PPG G+ + + G
Sbjct: 757 SGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------PGPPGKDGLPGHPGQRGEVGFQG 809
Query: 689 EGHVPALPSPGLQFG--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGF 746
+ P P G G G +G+ PG P + P G PG
Sbjct: 810 KTGPPGPPGVVGPQGAAGETGPMGERGHPG-----PPGPPGEQGLPGTAGKEGTKGDPGP 864
Query: 747 PFGAAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGA 804
P GA G+ PG P GG G G G G PP P P +R +A G
Sbjct: 865 P-GAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG--PPGPAGSPGERGAAGSGGP 921
Query: 805 LSLGSFNKPSSKDNLFGQSCLAALS-----TACQNMIASLGAPNLNVTFNKKNPPEGKRK 859
+ P G+ + T + +G P P G
Sbjct: 922 IGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPG----------PAGPPG 971
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSL 918
++ + D V G+PG G G PGP GP G A P A+G
Sbjct: 972 VAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1030
Query: 919 SPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSP----GTFFDKYSAAPDSGGAP 972
E T G +G P G G G K ++G V P G + A P+ P
Sbjct: 1031 GAKGD-EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGP 1089
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIG--SLDG 1030
PG G GE+ E + P +G + G QP G G
Sbjct: 1090 QGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESG-QPGEPGPPGPKG 1148
Query: 1031 GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG 1090
D N G D P+ A G P P
Sbjct: 1149 PTGDDGPKGNPGPVGFPG--------DPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1200
Query: 1091 AGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GE+GP P G S G G PG G PG P +G P PD +
Sbjct: 1201 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGL 1260
Query: 1151 HPL 1153
L
Sbjct: 1261 RGL 1263
Score = 87.4 bits (215), Expect = 8e-17
Identities = 292/1162 (25%), Positives = 364/1162 (31%), Gaps = 265/1162 (22%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHP 102
GPPG A G GM +P RG L GL + H G Q G P
Sbjct: 422 GPPGKAGRRGRA-GADGARGMPGDPGVKGDRGFDGLP--GLPGEKGHRGDTGAQGLPGPP 478
Query: 103 GSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGP 162
G G PG S G LLG G G G PP G M QGP
Sbjct: 479 GEDGERGDDGEIGPR---GLPGESGPRG--LLGPKGPPGIPG--PPGVRG---MDGPQGP 528
Query: 163 E-SFGPQ-RPGNLPDFHSSGASSHAVPAPCLPL----DQSPNRAASFHGLPSSSGSDSHS 216
+ S GPQ PG P + +P P + ++ P G+P S G H
Sbjct: 529 KGSLGPQGEPG--PPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH- 585
Query: 217 LEPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASA 275
PG E P G PS +G L +PG
Sbjct: 586 -------------------PGKEGPPGTKGNQGPSGPQGPL------------GYPGPRG 614
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRH 335
+ G+ GL K H + ++ + G F F G +G++ G R
Sbjct: 615 VKGVDGIRGL-KGH--------------KGEKGEDG--FPGFKG----DIGVK---GDRG 650
Query: 336 PLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQD 395
+ P + P+ + P P PP + + P LP G G P G L
Sbjct: 651 EVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPG-YPGRQG-PKGSL-- 706
Query: 396 GGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAK 455
G P P A E L +S P ++ P
Sbjct: 707 GFPGFPG--ASGEKGARGLSGKS------------GPRGERGPTG--------------- 737
Query: 456 RPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPS-----GP 510
PR G G +G+ D P GLPG P P+ FP GP
Sbjct: 738 -PR----GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG---PQGPNGFPGPKGPPGP 789
Query: 511 PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRL 570
P + P H Q+ + Q + Q AA M R
Sbjct: 790 PGKDGLPGHPG--------QRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 841
Query: 571 RQPNLAQLGHPGDVGQGGLVHG-GPVGGLAQPN------FEREGGSTG-AGRLGTFEQQA 622
P + G PG G+ G GP G + F E G G AG G +
Sbjct: 842 GPPG--EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEG 899
Query: 623 PHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPP--PPGGSGVLF---- 676
P SGP P G R GSG GP P P P PPG +G
Sbjct: 900 P---------SGPPGPAGSPGERGAAGSG-----GPIGPPGRPGPQGPPGAAGEKGVPGE 945
Query: 677 RGPL--------QEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASER 728
+GP+ Q P+ +PG PA P PG+ G G G++ PG G E
Sbjct: 946 KGPIGPTGRDGVQGPVGLPG----PAGP-PGV--AGEDGDKGEVGDPGQK-GTKGNKGEH 997
Query: 729 RPPPPDFATSALG--------GQPGFP-----FGAAGRQSTPHSGPGVNSPPSAGGGGGS 775
PP P +G G+PG FGA G + T G N PP G G
Sbjct: 998 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTR----GFNGPPGPIGLQGL 1053
Query: 776 SGGGGG----GGAYPPQPDFQPSQRTSASKLGALS-------LGSFNKPSSKDNLFGQSC 824
G G G P P P R A GA +G+ P K G+S
Sbjct: 1054 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP-GESG 1112
Query: 825 LAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGG 882
+ + G + + PP K T GNPG FPG
Sbjct: 1113 SPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPK-----GPTGDDGPKGNPGPVGFPGD 1167
Query: 883 TAPGAPGPGGPSGTSSS-GSKAS-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGG 940
PG PG GGP G + G + G P P T + G G P S G
Sbjct: 1168 --PGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1225
Query: 941 RGRGRRKRDSGHVSPGTFFDKYSAAPDSG-------GAPGVSPGQQQASGAAVGGSSAGE 993
G+G + +PG A P G PG S GQQ GA AG
Sbjct: 1226 GGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG-SVGQQGRPGAT---GQAGP 1281
Query: 994 TRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSL----DGGAKSDSSSPNVGEFASDEV 1049
P L + KG + P LIG + + G K D P
Sbjct: 1282 PGPVGPPGLPGLRGDAGAKGEK----GHPGLIGLIGPPGEQGEKGDRGLPG--------- 1328
Query: 1050 STSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMS 1109
S + + + P+ G P P G GPK A G G
Sbjct: 1329 --------PQGSPGQKGEMGIPGASGPIGPGGPPGLP-----GPAGPKGAKGATGPG--- 1372
Query: 1110 NSTSTPDSYGGGGGPGHPGTPG 1131
G G PGHPG PG
Sbjct: 1373 ---GPKGEKGVQGPPGHPGPPG 1391
Score = 85.5 bits (210), Expect = 3e-16
Identities = 159/615 (25%), Positives = 192/615 (31%), Gaps = 116/615 (18%)
Query: 579 GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTG----AGRLGTFEQQAPHLAQESAWFS 633
G PG VG QG GP+G P G G AG+ GT P A +
Sbjct: 815 GPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA 874
Query: 634 GPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG-PLQEPMRMPGEGH 691
G PG+ LP GG GL + GP P P PG G G P+ P R +G
Sbjct: 875 GLRGFPGERGLPGTAGGPGLKGNEGPSGPP-GPAGSPGERGAAGSGGPIGPPGRPGPQGP 933
Query: 692 VPALPSPGLQFGGSLGGLGQLQSPGAG--VGLPSAASERRPPPPDFATSALGGQPGFPFG 749
A G+ G G +G G VGLP A PP G+ G P G
Sbjct: 934 PGAAGEKGVP--GEKGPIGPTGRDGVQGPVGLPGPAG----PPGVAGEDGDKGEVGDP-G 986
Query: 750 AAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF----QPSQRTSASKLG 803
G + H PG P G G++G G GA PQ F R G
Sbjct: 987 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPG 1046
Query: 804 ALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQN 863
+ L PS + G + +G P PP + N
Sbjct: 1047 PIGLQGLPGPSGEKGETGD-------------VGPMGPPG---------PPGPRGPAGPN 1084
Query: 864 ETDGA-------------AVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSSGSKAS--GPP 907
DG G PG PG PG GP G G + GPP
Sbjct: 1085 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPP 1144
Query: 908 NP--PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHV-------SPGTF 958
P P DG +P G+ G P GG RG+ K D G SPG
Sbjct: 1145 GPKGPTGDDGPKGNPGPV--GFPGDPGPP-GEGGPRGQDGAKGDRGEDGEPGQPGSPGPT 1201
Query: 959 FDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLL 1018
+ P P SPG + G G + G+ P + P+ G
Sbjct: 1202 GENGPPGPLGKRGPAGSPGSEGRQG---GKGAKGDPGAIGAPGKTGPVGPAGPAGKP--- 1255
Query: 1019 GDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLV 1078
PD + L G +VG+ P A +A P
Sbjct: 1256 --GPDGLRGLPG---------SVGQ-------------------QGRPGATGQAG-PPGP 1284
Query: 1079 TGSPKLPPRGVGAGEHGPKAPPPALGL------GIMSNSTSTPDSYGGGGGPGHPGTPGL 1132
G P LP AG G K P +GL P G G G G PG
Sbjct: 1285 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGA 1344
Query: 1133 EQVRTPTSSSGAPPP 1147
P G P P
Sbjct: 1345 SGPIGPGGPPGLPGP 1359
Score = 79.7 bits (195), Expect = 2e-14
Identities = 246/1018 (24%), Positives = 319/1018 (31%), Gaps = 205/1018 (20%)
Query: 82 GLQAQP-VHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAA 140
G+ P V G G Q P GS P Q P G G PG L G + GA
Sbjct: 512 GIPGPPGVRGMDGPQGPK----GSLGP-QGEPGPPGQQG--TPGTQGLPGPQ-----GAI 559
Query: 141 GGLGSQPPFAE-GYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCL--PLDQSP 197
G G + P + G M S GP P PG + G + P L P +
Sbjct: 560 GPHGEKGPQGKPGLPGMPGSDGP----PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGV 615
Query: 198 NRAASFHGLPSSSGSDSHSLEPRRVTNQGAV-DSLEYNYPG----EAPSGHFDMFSPSDS 252
GL G P + G D E PG + P G P+
Sbjct: 616 KGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGD 675
Query: 253 EGQ--------------LPHYAAGRQVPGGA-----FPGASAMPRAAGMVGLSKMHAQPP 293
G LP Y GRQ P G+ FPGAS A G+ G S +
Sbjct: 676 PGPPGLMGEKGKLGVPGLPGYP-GRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 734
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQP- 352
P+ Q+ P+ + G P G G + P P + PP P +
Sbjct: 735 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDG 794
Query: 353 -PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPS 402
P P Q+ PP PPG++ Q + P ++G G P + G P
Sbjct: 795 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAG 854
Query: 403 QHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFP 462
+ + P P AP + D P + FP
Sbjct: 855 KEG----------------------TKGDPGPPGAPGK-----DGPAGLR-------GFP 880
Query: 463 GSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPA-PDHQS 521
G G+ A G L + PS PG G +P + SG P+ P P Q
Sbjct: 881 GERGLPGTAGGPG------LKGNEGPSGPPGPAG--SPGERGAAGSGGPIGPPGRPGPQG 932
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHP 581
++ ++ + Q +A + + ++G P
Sbjct: 933 PPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK-------GEVGDP 985
Query: 582 GDVGQGGLV--HG-----GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFS 633
G G G HG GP+G + QP G GA G G F + + + F+
Sbjct: 986 GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGD---EGTRGFN 1042
Query: 634 GPHPPPG-DLLPRRMGGSGLPADCGPHDPSLAPPP--------------PPGGSGVLFRG 678
GP P G LP G G D GP P P P PPGG G L G
Sbjct: 1043 GPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL--G 1100
Query: 679 PLQEPMRMPGEGHVPALPS-PGLQFG----GSLGGLGQLQSPGAG--------------- 718
P E PGE P + PG++ G G GQ PG
Sbjct: 1101 PPGEKGE-PGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNP 1159
Query: 719 -----VGLPSAASERRPPPPDFATSALG-----GQPGFP-----------FGAAGRQSTP 757
G P E P D A G GQPG P G G +P
Sbjct: 1160 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1219
Query: 758 HS-----GPGVNSPPSAGGGGGSSGG-GGGGGAYPPQPDFQ---PSQRTSASKLGALSLG 808
S G G P A G G +G G G A P PD P + GA
Sbjct: 1220 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1279
Query: 809 SFNKPSSKDNLFGQSCLAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
P L G A +I +G P + P + Q
Sbjct: 1280 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEM 1339
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLES 926
G A P PGG PG PGP GP G A+GP P + ++
Sbjct: 1340 GIPGASGPIG---PGGP-PGLPGPAGPKGAKG----ATGPGGPKGEKG---------VQG 1382
Query: 927 TSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
G+ G P K+ V + A P +GGAPG G ++ G+
Sbjct: 1383 PPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP-TGGAPGSPGGLEEIFGS 1439
Score = 76.3 bits (186), Expect = 2e-13
Identities = 173/718 (24%), Positives = 225/718 (31%), Gaps = 143/718 (19%)
Query: 524 QQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGD 583
Q QQ + Q+ QQQ + + Q Q+ + AA + + + + +P + G PG
Sbjct: 237 QNQQPHRAQRSPQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPAVLEPGMLVEGPPGP 296
Query: 584 VGQGGLVHGGPVGGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPHPPPGD- 641
G GL+ GP G P + G G GR G G PPG
Sbjct: 297 EGPAGLI--GPPGIQGNPGPVGDPGERGPPGRAGL------------PGSDGAPGPPGTS 342
Query: 642 -LLPRRMGGSGLPADCGP-------------HDPSLAPPPPPGGSGVLFR-GPLQEPMRM 686
+LP R G G D GP LA PPG G R GPL +P
Sbjct: 343 LMLPFRFGSGG--GDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQP--- 397
Query: 687 PGEGHVPALPSPGLQ-FGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPG 745
SPGL+ G LG G + P G P A R D A G PG
Sbjct: 398 ---------GSPGLKGESGDLGPQGP-RGPQGLTGPPGKAGRRGRAGADGAR----GMPG 443
Query: 746 FPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGAL 805
P G G + G + P G G G G G P P + +R ++G
Sbjct: 444 DP-GVKGDR-------GFDGLPGLPGEKGHRGDTGAQGL--PGPPGEDGERGDDGEIGPR 493
Query: 806 SLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLS-QNE 864
L + P L G G P P K L Q E
Sbjct: 494 GLPGESGPR---GLLGPK-------------GPPGIPGPPGVRGMDGPQGPKGSLGPQGE 537
Query: 865 TDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGS-----KASGPPNPPAQGDGTSLS 919
G PG+ PG GA GP G G + GPP P +
Sbjct: 538 PGPPGQQGTPGTQGLPG--PQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTK 595
Query: 920 PNYTLESTSGNDGKPVSGG-----GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSG--GAP 972
N G G P G G RG K + G F D G G P
Sbjct: 596 GNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVP 655
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDL-IGSLDG- 1030
G S G+ G K T P+ G L+G++ L + L G
Sbjct: 656 G-SRGEDGPEG------------------PKGRTGPTGDPGPPGLMGEKGKLGVPGLPGY 696
Query: 1031 ----GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPL-VTGSPKLP 1085
G K P + ++ + + + + + R P TG
Sbjct: 697 PGRQGPKGSLGFPGFPGASGEKGARGLSGKS--GPRGERGPTGPRGQRGPRGATGKSGAK 754
Query: 1086 PRGVGAGEHGP---KAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSS 1142
G G HGP + P G P G G PGHPG G + T
Sbjct: 755 GTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPP 814
Query: 1143 GAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG-----GKKGECAVGASGAQNG 1195
G PP + P Q + E P+G +G G GE + + + G
Sbjct: 815 G--PPGVVGP-------------QGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEG 857
Score = 74.3 bits (181), Expect = 7e-13
Identities = 241/1005 (23%), Positives = 313/1005 (31%), Gaps = 193/1005 (19%)
Query: 293 PQQQPQQQQQPQQQQQQ----HGVFFERFSGARKMPVGLEPSV---GSRHPLMQPPQQAP 345
PQQQP + +PQ Q+ Q HG G + P LEP + G P P
Sbjct: 248 PQQQPSRLHRPQNQEPQSQAAHGP--RGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGP 305
Query: 346 PPPQQQP-PQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTP--------SGGLQDG 396
P Q P P P ++ PP L + P G GT SGG D
Sbjct: 306 PGIQGNPGPVGDPGERGPPGRAGLPGSDGAP--------GPPGTSLMLPFRFGSGG-GDK 356
Query: 397 GPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRL-------------- 442
GP++ +Q AQ + + + P ++ + P Q + L
Sbjct: 357 GPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRG 416
Query: 443 -QHFDAPPYMNVAKRPRF------DFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLP 495
Q PP +R R PG GV ++G H + GLP
Sbjct: 417 PQGLTGPP-GKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLP 475
Query: 496 GEFTPPVPDS-----------------------FPSGPPLQHPAPDHQSLQ-QQQQQQQQ 531
G PP D P GPP P + + Q +
Sbjct: 476 G---PPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSL 532
Query: 532 QQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL----AQLGHPGDVG-- 585
Q + QQ Q I + Q + P + GHPG G
Sbjct: 533 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPP 592
Query: 586 -----------QGGLVHGGPVG--------GL----------AQPNFEREGGSTG----A 612
QG L + GP G GL P F+ + G G
Sbjct: 593 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 652
Query: 613 GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPR-RMGGSGLPADCGPHDP--SLAPPPPP 669
G G+ + P + +G PPG + + ++G GLP G P SL P P
Sbjct: 653 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFP 712
Query: 670 GGSGVLFRGPLQEPMRMPGE----------GHVPALPSPGLQFGGSLGGLGQLQSPGAGV 719
G SG L GE G A G + G+ GG G PG
Sbjct: 713 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAK--GTSGGDGPHGPPGER- 769
Query: 720 GLPSAASERRPPPPDFATSALG--GQPGFP--FGAAGRQ--STPHSGPGVNSPPSAGGGG 773
GLP P P G G PG P G G Q + P PGV P A G
Sbjct: 770 GLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGET 829
Query: 774 GSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALS--TA 831
G G G G PP P + +A K G + G P + G+ A L
Sbjct: 830 GPMGERGHPG--PPGPPGEQGLPGTAGKEG--TKGDPGPPGAP----GKDGPAGLRGFPG 881
Query: 832 CQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA----AVAGNPGSDYFPGGT---- 883
+ + + G P L PP + G+ G PG PG
Sbjct: 882 ERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKG 941
Query: 884 APGAPGPGGPSGTSSSGSKAS--GPPNPPA----QGD-GTSLSPNYTLESTSGNDGK--- 933
PG GP GP+G GP PP GD G P + T GN G+
Sbjct: 942 VPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQ--KGTKGNKGEHGP 999
Query: 934 -----PVSGGGGRGRGRRKRDSGHVSP-GTFFDKYSAAPDSGGAPGVSPGQQQASGAAVG 987
P+ G G + G P G F K P G Q G +
Sbjct: 1000 PGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE 1059
Query: 988 GSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSL----DGGAKSDSSSPNVGE 1043
G+ P P+ GA+ G P +G+L + G +S SP +
Sbjct: 1060 KGETGDVGPMGPPGPPGPRGPAGPNGADGPQG-PPGGVGNLGPPGEKGEPGESGSPGIQ- 1117
Query: 1044 FASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG-AGEHGPKAPPPA 1102
V E S + + P PK P VG G+ GP
Sbjct: 1118 -GEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPP----- 1171
Query: 1103 LGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
G G G G PG PG+PG PT +G P P
Sbjct: 1172 -GEGGPRGQDGAKGDRGEDGEPGQPGSPG------PTGENGPPGP 1209
Score = 40.4 bits (93), Expect = 0.011
Identities = 97/381 (25%), Positives = 122/381 (32%), Gaps = 73/381 (19%)
Query: 37 PAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQ 96
P GPPGP PA +G P I G N P G G + P G
Sbjct: 286 PGMLVEGPPGPEGPA-GLIGPPGIQG-NPGPVG----------DPGERGPPGRAGLPGSD 333
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPDPGA------SCLHGGRL--------LGYGGAAGG 142
G PG+ GG GP A + L RL +GY G G
Sbjct: 334 GAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGP 393
Query: 143 LGSQP--PFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA 200
LG QP P +G QGP GPQ P + A A +P D
Sbjct: 394 LG-QPGSPGLKGESGDLGPQGPR--GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGD 450
Query: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHY 259
F GLP G H D+ PG P G +G++ P
Sbjct: 451 RGFDGLPGLPGEKGH-----------RGDTGAQGLPG--PPGE---DGERGDDGEIGPRG 494
Query: 260 AAGRQVPGGAF--PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF 317
G P G G +P G+ G+ PQ + P QQ
Sbjct: 495 LPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGT-------- 546
Query: 318 SGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPA 377
G + +P G + ++G P + P + P P PP PG PP
Sbjct: 547 PGTQGLP-GPQGAIG-------PHGEKGPQGKPGLPGMPGSDGPPGHPG-----KEGPPG 593
Query: 378 LPRPQQGEAGTPSGGLQDGGP 398
+ QG +G P G L GP
Sbjct: 594 -TKGNQGPSG-PQGPLGYPGP 612
Score = 33.9 bits (76), Expect = 1.1
Identities = 86/346 (24%), Positives = 110/346 (31%), Gaps = 44/346 (12%)
Query: 95 QQPHHGH-PGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLL----GYGGAAGGLGSQPPF 149
QQP H P + P H G + L G L+ G G AG +G PP
Sbjct: 250 QQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIG--PPG 307
Query: 150 AEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSS 209
+G G GP LP S GA + LP + +
Sbjct: 308 IQGNPGPVGDPGER--GPPGRAGLPG--SDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQ 363
Query: 210 SGSDSHSLEPRRVTNQGAVDSLEYN-------YPG----EAPSGHFDMFSPSDSEGQL-P 257
L+ R+ +G + Y PG + SG P +G P
Sbjct: 364 EAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGP 423
Query: 258 HYAAGRQVPGGAFPGASAMPRAAGMVG---LSKMHAQPPQQQPQQQQQPQQQQQQHGVFF 314
AGR+ GA GA MP G+ G + P ++ + Q G
Sbjct: 424 PGKAGRRGRAGA-DGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG 482
Query: 315 ERFSGARKMPVGLEPSVGSRHPL--MQPPQQAPPP-------PQ--------QQPPQQPP 357
ER P GL G R L PP PP PQ Q P P
Sbjct: 483 ERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPG 542
Query: 358 QQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQ 403
QQ P GL Q + P + QG+ G P DG P P +
Sbjct: 543 QQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGK 588
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 97.1 bits (240), Expect = 1e-19
Identities = 152/603 (25%), Positives = 193/603 (32%), Gaps = 58/603 (9%)
Query: 571 RQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQES 629
RQ LG PG G G + G + P ER G TG G+ G A+ +
Sbjct: 806 RQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER--GPTGPRGQRGPRGATGKSGAKGT 863
Query: 630 AWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPG 688
+ GPH PPG+ LP G +G P GP P PPG G+ + + G
Sbjct: 864 SGGDGPHGPPGERGLPGPQGPNGFPGPKGP-------PGPPGKDGLPGHPGQRGEVGFQG 916
Query: 689 EGHVPALPSPGLQFG--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGF 746
+ P P G G G +G+ PG P + P G PG
Sbjct: 917 KTGPPGPPGVVGPQGAAGETGPMGERGHPG-----PPGPPGEQGLPGTAGKEGTKGDPGP 971
Query: 747 PFGAAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGA 804
P GA G+ PG P GG G G G G PP P P +R +A G
Sbjct: 972 P-GAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSG--PPGPAGSPGERGAAGSGGP 1028
Query: 805 LSLGSFNKPSSKDNLFGQSCLAALS-----TACQNMIASLGAPNLNVTFNKKNPPEGKRK 859
+ P G+ + T + +G P P G
Sbjct: 1029 IGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPG----------PAGPPG 1078
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSL 918
++ + D V G+PG G G PGP GP G A P A+G
Sbjct: 1079 VAGEDGDKGEV-GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHF 1137
Query: 919 SPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSP----GTFFDKYSAAPDSGGAP 972
E T G +G P G G G K ++G V P G + A P+ P
Sbjct: 1138 GAKGD-EGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGP 1196
Query: 973 GVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIG--SLDG 1030
PG G GE+ E + P +G + G QP G G
Sbjct: 1197 QGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESG-QPGEPGPPGPKG 1255
Query: 1031 GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG 1090
D N G D P+ A G P P
Sbjct: 1256 PTGDDGPKGNPGPVGFPG--------DPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGP 1307
Query: 1091 AGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEI 1150
GE+GP P G S G G PG G PG P +G P PD +
Sbjct: 1308 TGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGL 1367
Query: 1151 HPL 1153
L
Sbjct: 1368 RGL 1370
Score = 87.4 bits (215), Expect = 8e-17
Identities = 292/1162 (25%), Positives = 364/1162 (31%), Gaps = 265/1162 (22%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHP 102
GPPG A G GM +P RG L GL + H G Q G P
Sbjct: 529 GPPGKAGRRGRA-GADGARGMPGDPGVKGDRGFDGLP--GLPGEKGHRGDTGAQGLPGPP 585
Query: 103 GSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGP 162
G G PG S G LLG G G G PP G M QGP
Sbjct: 586 GEDGERGDDGEIGPR---GLPGESGPRG--LLGPKGPPGIPG--PPGVRG---MDGPQGP 635
Query: 163 E-SFGPQ-RPGNLPDFHSSGASSHAVPAPCLPL----DQSPNRAASFHGLPSSSGSDSHS 216
+ S GPQ PG P + +P P + ++ P G+P S G H
Sbjct: 636 KGSLGPQGEPG--PPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGH- 692
Query: 217 LEPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASA 275
PG E P G PS +G L +PG
Sbjct: 693 -------------------PGKEGPPGTKGNQGPSGPQGPL------------GYPGPRG 721
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRH 335
+ G+ GL K H + ++ + G F F G +G++ G R
Sbjct: 722 VKGVDGIRGL-KGH--------------KGEKGEDG--FPGFKG----DIGVK---GDRG 757
Query: 336 PLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQD 395
+ P + P+ + P P PP + + P LP G G P G L
Sbjct: 758 EVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPG-YPGRQG-PKGSL-- 813
Query: 396 GGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAK 455
G P P A E L +S P ++ P
Sbjct: 814 GFPGFPG--ASGEKGARGLSGKS------------GPRGERGPTG--------------- 844
Query: 456 RPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPS-----GP 510
PR G G +G+ D P GLPG P P+ FP GP
Sbjct: 845 -PR----GQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPG---PQGPNGFPGPKGPPGP 896
Query: 511 PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRL 570
P + P H Q+ + Q + Q AA M R
Sbjct: 897 PGKDGLPGHPG--------QRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPP 948
Query: 571 RQPNLAQLGHPGDVGQGGLVHG-GPVGGLAQPN------FEREGGSTG-AGRLGTFEQQA 622
P + G PG G+ G GP G + F E G G AG G +
Sbjct: 949 GPPG--EQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEG 1006
Query: 623 PHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPP--PPGGSGVLF---- 676
P SGP P G R GSG GP P P P PPG +G
Sbjct: 1007 P---------SGPPGPAGSPGERGAAGSG-----GPIGPPGRPGPQGPPGAAGEKGVPGE 1052
Query: 677 RGPL--------QEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASER 728
+GP+ Q P+ +PG PA P PG+ G G G++ PG G E
Sbjct: 1053 KGPIGPTGRDGVQGPVGLPG----PAGP-PGV--AGEDGDKGEVGDPGQK-GTKGNKGEH 1104
Query: 729 RPPPPDFATSALG--------GQPGFP-----FGAAGRQSTPHSGPGVNSPPSAGGGGGS 775
PP P +G G+PG FGA G + T G N PP G G
Sbjct: 1105 GPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTR----GFNGPPGPIGLQGL 1160
Query: 776 SGGGGG----GGAYPPQPDFQPSQRTSASKLGALS-------LGSFNKPSSKDNLFGQSC 824
G G G P P P R A GA +G+ P K G+S
Sbjct: 1161 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEP-GESG 1219
Query: 825 LAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGG 882
+ + G + + PP K T GNPG FPG
Sbjct: 1220 SPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPK-----GPTGDDGPKGNPGPVGFPGD 1274
Query: 883 TAPGAPGPGGPSGTSSS-GSKAS-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGG 940
PG PG GGP G + G + G P P T + G G P S G
Sbjct: 1275 --PGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1332
Query: 941 RGRGRRKRDSGHVSPGTFFDKYSAAPDSG-------GAPGVSPGQQQASGAAVGGSSAGE 993
G+G + +PG A P G PG S GQQ GA AG
Sbjct: 1333 GGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG-SVGQQGRPGAT---GQAGP 1388
Query: 994 TRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSL----DGGAKSDSSSPNVGEFASDEV 1049
P L + KG + P LIG + + G K D P
Sbjct: 1389 PGPVGPPGLPGLRGDAGAKGEK----GHPGLIGLIGPPGEQGEKGDRGLPG--------- 1435
Query: 1050 STSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMS 1109
S + + + P+ G P P G GPK A G G
Sbjct: 1436 --------PQGSPGQKGEMGIPGASGPIGPGGPPGLP-----GPAGPKGAKGATGPG--- 1479
Query: 1110 NSTSTPDSYGGGGGPGHPGTPG 1131
G G PGHPG PG
Sbjct: 1480 ---GPKGEKGVQGPPGHPGPPG 1498
Score = 85.5 bits (210), Expect = 3e-16
Identities = 159/615 (25%), Positives = 192/615 (31%), Gaps = 116/615 (18%)
Query: 579 GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTG----AGRLGTFEQQAPHLAQESAWFS 633
G PG VG QG GP+G P G G AG+ GT P A +
Sbjct: 922 GPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPA 981
Query: 634 GPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG-PLQEPMRMPGEGH 691
G PG+ LP GG GL + GP P P PG G G P+ P R +G
Sbjct: 982 GLRGFPGERGLPGTAGGPGLKGNEGPSGPP-GPAGSPGERGAAGSGGPIGPPGRPGPQGP 1040
Query: 692 VPALPSPGLQFGGSLGGLGQLQSPGAG--VGLPSAASERRPPPPDFATSALGGQPGFPFG 749
A G+ G G +G G VGLP A PP G+ G P G
Sbjct: 1041 PGAAGEKGVP--GEKGPIGPTGRDGVQGPVGLPGPAG----PPGVAGEDGDKGEVGDP-G 1093
Query: 750 AAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF----QPSQRTSASKLG 803
G + H PG P G G++G G GA PQ F R G
Sbjct: 1094 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPG 1153
Query: 804 ALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQN 863
+ L PS + G + +G P PP + N
Sbjct: 1154 PIGLQGLPGPSGEKGETGD-------------VGPMGPPG---------PPGPRGPAGPN 1191
Query: 864 ETDGA-------------AVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSSGSKAS--GPP 907
DG G PG PG PG GP G G + GPP
Sbjct: 1192 GADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPP 1251
Query: 908 NP--PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHV-------SPGTF 958
P P DG +P G+ G P GG RG+ K D G SPG
Sbjct: 1252 GPKGPTGDDGPKGNPGPV--GFPGDPGPP-GEGGPRGQDGAKGDRGEDGEPGQPGSPGPT 1308
Query: 959 FDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLL 1018
+ P P SPG + G G + G+ P + P+ G
Sbjct: 1309 GENGPPGPLGKRGPAGSPGSEGRQG---GKGAKGDPGAIGAPGKTGPVGPAGPAGKP--- 1362
Query: 1019 GDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLV 1078
PD + L G +VG+ P A +A P
Sbjct: 1363 --GPDGLRGLPG---------SVGQ-------------------QGRPGATGQAG-PPGP 1391
Query: 1079 TGSPKLPPRGVGAGEHGPKAPPPALGL------GIMSNSTSTPDSYGGGGGPGHPGTPGL 1132
G P LP AG G K P +GL P G G G G PG
Sbjct: 1392 VGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGA 1451
Query: 1133 EQVRTPTSSSGAPPP 1147
P G P P
Sbjct: 1452 SGPIGPGGPPGLPGP 1466
Score = 79.7 bits (195), Expect = 2e-14
Identities = 246/1018 (24%), Positives = 319/1018 (31%), Gaps = 205/1018 (20%)
Query: 82 GLQAQP-VHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAA 140
G+ P V G G Q P GS P Q P G G PG L G + GA
Sbjct: 619 GIPGPPGVRGMDGPQGPK----GSLGP-QGEPGPPGQQG--TPGTQGLPGPQ-----GAI 666
Query: 141 GGLGSQPPFAE-GYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCL--PLDQSP 197
G G + P + G M S GP P PG + G + P L P +
Sbjct: 667 GPHGEKGPQGKPGLPGMPGSDGP----PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGV 722
Query: 198 NRAASFHGLPSSSGSDSHSLEPRRVTNQGAV-DSLEYNYPG----EAPSGHFDMFSPSDS 252
GL G P + G D E PG + P G P+
Sbjct: 723 KGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGD 782
Query: 253 EGQ--------------LPHYAAGRQVPGGA-----FPGASAMPRAAGMVGLSKMHAQPP 293
G LP Y GRQ P G+ FPGAS A G+ G S +
Sbjct: 783 PGPPGLMGEKGKLGVPGLPGYP-GRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERG 841
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQP- 352
P+ Q+ P+ + G P G G + P P + PP P +
Sbjct: 842 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDG 901
Query: 353 -PQQPPQQQ---------PPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPS 402
P P Q+ PP PPG++ Q + P ++G G P + G P
Sbjct: 902 LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAG 961
Query: 403 QHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFP 462
+ + P P AP + D P + FP
Sbjct: 962 KEG----------------------TKGDPGPPGAPGK-----DGPAGLR-------GFP 987
Query: 463 GSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPA-PDHQS 521
G G+ A G L + PS PG G +P + SG P+ P P Q
Sbjct: 988 GERGLPGTAGGPG------LKGNEGPSGPPGPAG--SPGERGAAGSGGPIGPPGRPGPQG 1039
Query: 522 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHP 581
++ ++ + Q +A + + ++G P
Sbjct: 1040 PPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDK-------GEVGDP 1092
Query: 582 GDVGQGGLV--HG-----GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFS 633
G G G HG GP+G + QP G GA G G F + + + F+
Sbjct: 1093 GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGD---EGTRGFN 1149
Query: 634 GPHPPPG-DLLPRRMGGSGLPADCGPHDPSLAPPP--------------PPGGSGVLFRG 678
GP P G LP G G D GP P P P PPGG G L G
Sbjct: 1150 GPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNL--G 1207
Query: 679 PLQEPMRMPGEGHVPALPS-PGLQFG----GSLGGLGQLQSPGAG--------------- 718
P E PGE P + PG++ G G GQ PG
Sbjct: 1208 PPGEKGE-PGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNP 1266
Query: 719 -----VGLPSAASERRPPPPDFATSALG-----GQPGFP-----------FGAAGRQSTP 757
G P E P D A G GQPG P G G +P
Sbjct: 1267 GPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSP 1326
Query: 758 HS-----GPGVNSPPSAGGGGGSSGG-GGGGGAYPPQPDFQ---PSQRTSASKLGALSLG 808
S G G P A G G +G G G A P PD P + GA
Sbjct: 1327 GSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1386
Query: 809 SFNKPSSKDNLFGQSCLAALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD 866
P L G A +I +G P + P + Q
Sbjct: 1387 GPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEM 1446
Query: 867 GAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLES 926
G A P PGG PG PGP GP G A+GP P + ++
Sbjct: 1447 GIPGASGPIG---PGGP-PGLPGPAGPKGAKG----ATGPGGPKGEKG---------VQG 1489
Query: 927 TSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
G+ G P K+ V + A P +GGAPG G ++ G+
Sbjct: 1490 PPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP-TGGAPGSPGGLEEIFGS 1546
Score = 48.9 bits (115), Expect = 3e-05
Identities = 91/381 (23%), Positives = 128/381 (33%), Gaps = 71/381 (18%)
Query: 868 AAVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLES 926
A + G PG PG PG GP G +G S G P PP GTSL + S
Sbjct: 407 AGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGS----DGAPGPP----GTSLMLPFRFGS 458
Query: 927 TSGNDGKPVSGGGGRGRG--RRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
G+ G V+ + + ++ R + PG Y+ P G PG SPG + SG
Sbjct: 459 GGGDKGPVVAAQEAQAQAILQQARLALRGPPGPM--GYTGRPGPLGQPG-SPGLKGESGD 515
Query: 985 AVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGS--LDGGAKSDSSSPNVG 1042
G P + + GA + GD P + G DG + G
Sbjct: 516 LGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD-PGVKGDRGFDGLPGLPGEKGHRG 574
Query: 1043 EFASDEVSTSYANEDEVSSSSD----------NPQALVKASRSPLVTGSPKL-------- 1084
+ + + + E + P+ L+ P + G P +
Sbjct: 575 DTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQG 634
Query: 1085 ------------PPRGVGA-------------GEHGPKAPPPALGLGIMSNSTSTPDSYG 1119
PP G G HG K P GL M S P G
Sbjct: 635 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPP---G 691
Query: 1120 GGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG 1179
G G PGT G + P G P P + ++ ++ L+ + ED G KG
Sbjct: 692 HPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRG---LKGHKGEKGEDGFPGFKG 748
Query: 1180 -----GKKGECAVGASGAQNG 1195
G +GE V S ++G
Sbjct: 749 DIGVKGDRGEVGVPGSRGEDG 769
Score = 47.4 bits (111), Expect = 9e-05
Identities = 147/688 (21%), Positives = 206/688 (29%), Gaps = 150/688 (21%)
Query: 519 HQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQL 578
++S +Q++ + + Q+++ Q QQ + Q+ Q+Q + L R Q Q + L
Sbjct: 218 YESCEQKELECEGGQRERPQNQQPHRAQRSPQQQPSRL------HRPQNQEPQSQPTESL 271
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPP 638
+ + ++ G P E + L E++ L PP
Sbjct: 272 YYDYEPPYYDVMTTGTTPDYQDPTPGEEEEILESSLLPPLEEEQTDLQV---------PP 322
Query: 639 PGDLLP-RRMGGSGLPADCGPHD----------------PSLAPPPPPGGSGVLFRGPLQ 681
D G G GP+D P+L+ G+
Sbjct: 323 TADRFQAEEYGEGGTDPPEGPYDYTYGYGDDYREETELGPALSAETAHSGAAA------H 376
Query: 682 EPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG 741
P + GE PA+ PG+ G G G P +G P +
Sbjct: 377 GPRGLKGEKGEPAVLEPGMLVEGPPGPEG----PAGLIGPPG----------------IQ 416
Query: 742 GQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGG--------------GGGGGAYPP 787
G PG P PG PP G GS G G GGG P
Sbjct: 417 GNPG-----------PVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGP 465
Query: 788 QPDFQPSQRTSASKLGALSLGSFNKP---SSKDNLFGQSCLAALSTACQNMIASLGAPNL 844
Q +Q + + L+L P + + GQ S + LG
Sbjct: 466 VVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPG----SPGLKGESGDLGPQGP 521
Query: 845 NVTFNKKNPPEGKRKLSQNETDGA-------AVAGNPGSDYFPGGTAPGAPGPGGPSGTS 897
PP + + DGA V G+ G D PG PG G G +G
Sbjct: 522 RGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPG--LPGEKGHRGDTG-- 577
Query: 898 SSGSKASGPPNPPAQ----GDGTSLSPNYTLESTS-----GNDGKPVSGG--GGRGRGRR 946
A G P PP + GD + P + G G P G G RG
Sbjct: 578 -----AQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGP 632
Query: 947 KRDSGHVSPGTFFDKYSAAPDSGGAPGVS--PGQQQASG--AAVGGSSAGETRGAP---- 998
+ G + P P G PG PG Q A G G G P
Sbjct: 633 QGPKGSLGP----QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDG 688
Query: 999 TPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYAN-ED 1057
P P KG + G Q L G K + ++ + +
Sbjct: 689 PPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKG 748
Query: 1058 EVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDS 1117
++ D + V SR GE GP+ P G + P
Sbjct: 749 DIGVKGDRGEVGVPGSR-----------------GEDGPEGPKGRTG---PTGDPGPPGL 788
Query: 1118 YGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
G G G PG PG + P S G P
Sbjct: 789 MGEKGKLGVPGLPGYPGRQGPKGSLGFP 816
Score = 40.4 bits (93), Expect = 0.011
Identities = 97/381 (25%), Positives = 122/381 (32%), Gaps = 73/381 (19%)
Query: 37 PAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQ 96
P GPPGP PA +G P I G N P G G + P G
Sbjct: 393 PGMLVEGPPGPEGPA-GLIGPPGIQG-NPGPVG----------DPGERGPPGRAGLPGSD 440
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPDPGA------SCLHGGRL--------LGYGGAAGG 142
G PG+ GG GP A + L RL +GY G G
Sbjct: 441 GAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGP 500
Query: 143 LGSQP--PFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA 200
LG QP P +G QGP GPQ P + A A +P D
Sbjct: 501 LG-QPGSPGLKGESGDLGPQGPR--GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGD 557
Query: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHY 259
F GLP G H D+ PG P G +G++ P
Sbjct: 558 RGFDGLPGLPGEKGH-----------RGDTGAQGLPG--PPGE---DGERGDDGEIGPRG 601
Query: 260 AAGRQVPGGAF--PGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF 317
G P G G +P G+ G+ PQ + P QQ
Sbjct: 602 LPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGT-------- 653
Query: 318 SGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPA 377
G + +P G + ++G P + P + P P PP PG PP
Sbjct: 654 PGTQGLP-GPQGAIG-------PHGEKGPQGKPGLPGMPGSDGPPGHPG-----KEGPPG 700
Query: 378 LPRPQQGEAGTPSGGLQDGGP 398
+ QG +G P G L GP
Sbjct: 701 -TKGNQGPSG-PQGPLGYPGP 719
Score = 31.2 bits (69), Expect = 6.9
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 16/147 (10%)
Query: 1061 SSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGL-GIMSNSTSTPDSYG 1119
+++ P+ L P V L P + G GP+ P +G GI N D G
Sbjct: 373 AAAHGPRGLKGEKGEPAV-----LEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDP-G 426
Query: 1120 GGGGPGHPGTPGLEQVRTPTSSS-------GAPPPDEIHPLEILQAQIQLQRQQFSISED 1172
G PG G PG + P +S G+ D+ + +AQ Q QQ ++
Sbjct: 427 ERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALR 486
Query: 1173 QPLGLKG--GKKGECAVGASGAQNGDS 1197
P G G G+ G S G+S
Sbjct: 487 GPPGPMGYTGRPGPLGQPGSPGLKGES 513
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 96.7 bits (239), Expect = 1e-19
Identities = 232/980 (23%), Positives = 316/980 (32%), Gaps = 236/980 (24%)
Query: 44 PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88
PPGP P +S G+ PP +G EP G H L A G Q PV
Sbjct: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
Query: 89 ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144
+ ++G P G PG + P F + G PG +H AAG G
Sbjct: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
Query: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204
S P +E SQ G RPG G +
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
Query: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264
G + G+ + ++ A G + +G+ + SP RQ
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
Query: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
GG G P G LSK A F+RF+G + P
Sbjct: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
Query: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384
G P++ L+ P P + P P PP PP+ P+ Q
Sbjct: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
Query: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444
AG +GG Q M + +Y + S P S P P +Q
Sbjct: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
Query: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501
+P V KRP+ GS + H P S YPG G + PP
Sbjct: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
Query: 502 VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQ------QQQQQQQQQQQQQRQNAA 555
P +P G +Q P + Q QQQ Q QQ QQ QQ QQ Q +
Sbjct: 496 GPQRYPIG--IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP 553
Query: 556 LMIKQMASRNQQQRLRQPNLAQLGH---------PGDVGQ-----------------GGL 589
+ + S++QQ+ Q +++Q G+ PG G
Sbjct: 554 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS 613
Query: 590 VHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS----GPHPPP-GDLL 643
+ P G A + GST + + Q+P S S GP P P G +
Sbjct: 614 IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 673
Query: 644 PRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QEPMRMPGEGHVPAL- 695
SG P S PP PPG L + P+ QE M G P +
Sbjct: 674 GSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 732
Query: 696 --------------PSPGLQFGGSL-------------------GGLGQLQSPGAGVGLP 722
PSPG Q + G G P A G+P
Sbjct: 733 QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVP 792
Query: 723 SAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQSTPHSGPGVNSPPSAG 770
SA+ P P SA + GQ P P GA AG Q+ P G + PS+
Sbjct: 793 SASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSP 850
Query: 771 GGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALS 829
G G G G PP P + +Q +A+ + A + + ++ S + +A+ S
Sbjct: 851 GMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSS 906
Query: 830 TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAGNPGSDYFP-----G 881
Q M N + N + PP N + G A +PG P
Sbjct: 907 PYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
Query: 882 GTAPGAPGPGGPSGTSSSGS 901
G G P P S SSS +
Sbjct: 961 GKEEGTPQPESKSKKSSSST 980
Score = 95.1 bits (235), Expect = 4e-19
Identities = 168/663 (25%), Positives = 217/663 (32%), Gaps = 145/663 (21%)
Query: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573
H H +LQQQ Q QQQQQQQQQQQQQQQQQQ N +L
Sbjct: 40 HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
Query: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629
GG GG QP + E GG+ + G + P L +
Sbjct: 83 ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
Query: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689
P G+ R GL A G P P PGG G GP P
Sbjct: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
Query: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747
G PA PG + G G QSPG G + SAA+ P D ++ G P
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
S P +G G GGGGGS GGGGGGGA GA
Sbjct: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGA------------------GAGGA 276
Query: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867
G+ A++ A A+ G G + G
Sbjct: 277 GA----------------GAVAAAAAAAAAAAGG--------------GGGGGYGGSSAG 306
Query: 868 AAVAGNPGSDYFPGGTAPGAPGPGGPSGTS--SSGSKASGPPNPPAQGDGTS-LSPNYTL 924
V +P GG PG GG + S ++GS A G Q S +P
Sbjct: 307 YGVLSSPRQQ---GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQ 363
Query: 925 ESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
TS + GG + +YS+ P Q A+GA
Sbjct: 364 LLTSPSPMMRSYGGS-------------------YPEYSSPSAPPPPPSQPQSQAAAAGA 404
Query: 985 AVGG--SSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVG 1042
A GG ++AG G + A SP+W + P + G P +G
Sbjct: 405 AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQ---RSHPAMSPGTPG--------PTMG 453
Query: 1043 EFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPA 1102
+ ++ NP + + S SP GS P G G + P
Sbjct: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS-SPYPGGS--YGPPGPQRYPIGIQGRTPG 510
Query: 1103 LGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQL 1162
G+ P YG G G+ +Q + P S PP + L +Q Q
Sbjct: 511 AMAGMQYPQQQMPPQYGQQGVSGY-----CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQ 565
Query: 1163 QRQ 1165
+ Q
Sbjct: 566 RYQ 568
Score = 82.8 bits (203), Expect = 2e-15
Identities = 181/796 (22%), Positives = 249/796 (31%), Gaps = 114/796 (14%)
Query: 31 NTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHG 90
N ++ + A +GGP G P G GM M +H+ A G
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM------------MHSASAAAAGAPG 220
Query: 91 FFGG-QQPHHGHPGS---HHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAG-GLGS 145
Q H G+P S H+P P GG GG G GG G GA G G G+
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
Query: 146 QPPFAEGYEHMAESQGPESFGPQRPG----NLPDFHSSGASSHAVPAPCLPLDQSPNRAA 201
A A G +G G + P G L ++ +A
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 202 SFHGLPSSSGSDSHSLEPRRVTNQ--GAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHY 259
+ G +G + H NQ + + +Y G P + +P Q
Sbjct: 341 A-GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPE-YSSPSAPPPPPSQPQSQ 398
Query: 260 AAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSG 319
AA G A+ M M G A P QQ+ P G R G
Sbjct: 399 AAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQG 457
Query: 320 ARKMPVGLEP----SVGSRHPLMQPPQQA--------PPPPQQQP------------PQQ 355
+ P+ ++ +GS +P QP Q + PP PQ+ P Q
Sbjct: 458 SPMDPMVMKRPQLYGMGS-NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ 516
Query: 356 PPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLE 415
PQQQ PP G C +P + P L LPSQ Q P +
Sbjct: 517 YPQQQMPPQYGQQGVSGYCQQG-QQPYYSQQPQPP-HLPPQAQYLPSQSQQRYQPQQDMS 574
Query: 416 NRSMHPYSEPVFS-----------MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGS 464
S+P + +Q P P+ D P GS
Sbjct: 575 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 634
Query: 465 AGVDRCASWNGSMHNGA---LDNHLSP--SAYPGLPGEFTPPVPDSFPSGPPLQHPAP-D 518
S G N A H SP S+ PG P P P P G P
Sbjct: 635 ------TSSQGDQSNPAQSPFSPHASPHLSSIPGGPS----PSPVGSPVGSNQSRSGPIS 684
Query: 519 HQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQL 578
S+ Q Q Q + Q ++ + Q + Q +Q +
Sbjct: 685 PASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMS 744
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGG--STGAGRLGTFEQQAPHLAQESAWFSGPH 636
HP GG +H G + Q N G + G G + + + SA +SGP
Sbjct: 745 PHP---SPGGQMHAG-ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPG 800
Query: 637 PPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
P G +M G G P P G+ L R P P G++ ++
Sbjct: 801 PGMGISANNQMHGQG--------------PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT 846
Query: 697 SPGLQFGGSLGGLGQLQSPGAGVGLPS-------AASERRPPPPDFATSALGGQPGFPFG 749
S G+ Q PG G +P+ AA+ + A S G PG
Sbjct: 847 P-------SSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQS 899
Query: 750 AAGRQSTPHSGPGVNS 765
S+P+S P NS
Sbjct: 900 GLMASSSPYSQPMNNS 915
Score = 68.2 bits (165), Expect = 5e-11
Identities = 125/504 (24%), Positives = 179/504 (35%), Gaps = 69/504 (13%)
Query: 703 GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754
GG+ GG Q ++ P G SAA + PP S G + P A GR
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 755 STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
P G G PP A GGGGG A P ++ S ++ G + F++
Sbjct: 143 EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
+ + G + + S A + GAP G QN +G N
Sbjct: 198 GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
Query: 874 PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933
+++PG + PGA G GG G GS G G G + + + +
Sbjct: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
Query: 934 PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990
GGGG G G G +S P P GGA +S + A+G+A GG
Sbjct: 291 AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
Query: 991 AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044
AG+ + GA + LTSPS G P +S +++
Sbjct: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
Query: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099
+ +D + + A A + SP P +G + P P
Sbjct: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
Query: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLE 1154
P G+G SN S P Y GG G PG P Q RTP + +G P + P +
Sbjct: 468 PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQ 525
Query: 1155 ILQAQI----QLQRQQFSISEDQP 1174
Q + Q +Q + + QP
Sbjct: 526 YGQQGVSGYCQQGQQPYYSQQPQP 549
Score = 56.2 bits (134), Expect = 2e-07
Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)
Query: 95 QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147
Q P + GS Q G N PG AS HG GG + +
Sbjct: 1108 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1167
Query: 148 PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205
PF++ +++S P+ S P P + G S +P + PN+ F G
Sbjct: 1168 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1213
Query: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261
+ GS + ++ N D YN ++PSG + Q P+ A+
Sbjct: 1214 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1267
Query: 262 ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303
G+Q PG P + P GL K H PP ++ + Q
Sbjct: 1268 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1326
Query: 304 QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359
QQQ+ + + +SG + P+ G P SR + P Q PP P Q
Sbjct: 1327 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1386
Query: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417
+ P R + +P P Q G P G Q P P + + P R+ +
Sbjct: 1387 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1438
Query: 418 SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477
S P + P + + +Q PP +P + P S + + +
Sbjct: 1439 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1487
Query: 478 HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515
+L+N +SPS P LP + P VP S +GPP Q P
Sbjct: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1529
Score = 53.9 bits (128), Expect = 1e-06
Identities = 206/912 (22%), Positives = 263/912 (28%), Gaps = 191/912 (20%)
Query: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394
H L Q Q QQQ QQ QQQ P + NS G GG
Sbjct: 46 HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
Query: 395 DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454
GP E P H S PP ++ DAPP M
Sbjct: 91 QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
Query: 455 KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512
R++ PG GAL P A PG G P + + S P
Sbjct: 138 AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
Query: 513 QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
P ++ Q QQ L N Q
Sbjct: 183 SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
Query: 573 PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630
P ++ G G G GG GG GG GG GAG G A A +A
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 631 -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
+ G G L R G G+ P G S A G F G Q
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
Query: 683 PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717
P P + PSP ++ +GGS G Q A
Sbjct: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 718 GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753
G+GL AA+++R P P +G G P G
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
Query: 754 QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPDFQPSQRTSASK 801
S PHS P +SP G G G + G G YP Q P Q
Sbjct: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ--MPPQYGQQGV 531
Query: 802 LGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKR 858
G G +++ +L Q+ L + Q + + PP
Sbjct: 532 SGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
Query: 859 K-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPA 911
K L Q E + + D P GT SG++SS S P P
Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP- 648
Query: 912 QGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGA 971
SP+ + S G P G G + SG +SP A+
Sbjct: 649 ------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP--------ASIPGSQM 693
Query: 972 PGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGG 1031
P PG Q S SS +P P E+ + + G Q G
Sbjct: 694 PPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT------GP 741
Query: 1032 AKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLP 1085
+ S SP + F S +Y + S PQ SR P +G P
Sbjct: 742 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSRPPAYSGVPSAS 795
Query: 1086 PRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
G G G GP P A+ LG M ++ + G P +PG+ Q
Sbjct: 796 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ 855
Query: 1136 RTPTSSSGAPPP 1147
P G P P
Sbjct: 856 GGP--GMGPPMP 865
Score = 46.2 bits (108), Expect = 2e-04
Identities = 178/865 (20%), Positives = 269/865 (31%), Gaps = 202/865 (23%)
Query: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDP-----GASCLHGGRLLG-----------YG 137
G PH P Q P+ GG++G P P G G + G YG
Sbjct: 474 GSNPHS------QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYG 527
Query: 138 --GAAG----------GLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHA 185
G +G QPP SQ + + PQ+ D G + +
Sbjct: 528 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ-----DMSQEGYGTRS 582
Query: 186 VP--APCLPLDQSPNRAASFH--GLPSSSGSDSHSLEPRRVTNQGAVD-SLEYNYPGEAP 240
P AP P + N LP SGS T AV S + G+
Sbjct: 583 QPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 642
Query: 241 SGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP--PQQQPQ 298
+ FSP S PH ++ +PGG P P VG ++ + P P P
Sbjct: 643 NPAQSPFSPHAS----PHLSS---IPGGPSPSPVGSP-----VGSNQSRSGPISPASIPG 690
Query: 299 QQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQ 358
Q PQ Q S + P + + M Q+ P Q P Q P
Sbjct: 691 SQMPPQPPGSQ--------SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS 742
Query: 359 QQPPPPP------GLLVRQNSCPPALPRPQQGE-------------AGTPSGGLQDGGPM 399
P P P G+ Q S PQ + +G PS GP
Sbjct: 743 MSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPG 802
Query: 400 L------------PSQHAQF----EYPIHRLENR-------SMHPYSEPVFSMQHP---P 433
+ PSQ P ++NR SM P S + P P
Sbjct: 803 MGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGP 862
Query: 434 PQQAPNQRLQHFDAPPYM---NVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSA 490
P N++ Q A N A+ + FPG AS S ++ ++N S
Sbjct: 863 PMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS--SSPYSQPMNNSSSLMN 920
Query: 491 YPGLPGEFTPPVPDSFPSGPPLQHP-APDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQ 549
P P + +S + L +P L + +++ Q + + ++
Sbjct: 921 TQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSST 980
Query: 550 QRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGD-------VGQGGL------VHGGPVG 596
+ ++ + +++ L + G VG+ L V +G
Sbjct: 981 TTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIG 1040
Query: 597 GLAQPNFEREGGSTGAG-RLGTFEQQAPHLAQESAWF---------SGPHPPP------- 639
GLAQ N ++ +GT A L ++ + G PPP
Sbjct: 1041 GLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGD 1100
Query: 640 -------------------GDLLPRRMGGSGL---PADCGPHDPSLAP----PPPPGG-- 671
G P+ G + + P D P P+ P P GG
Sbjct: 1101 TKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRS 1160
Query: 672 --------------------SGVLFRGPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLG 710
+ + P Q+ M MP G +P P+ FGG G
Sbjct: 1161 STISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD-PFGGMRKVPG 1219
Query: 711 QLQSPGAGVGLPSAASE---RRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPP 767
+ +P+++ + + P + +G + FP+GA+ H G P
Sbjct: 1220 SSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS--YDRRHEPYGQQYPG 1277
Query: 768 SAGGGGGSSGGGGGGGAYPPQPDFQ 792
G GG G YP QP+++
Sbjct: 1278 QGPPSGQPPYGGHQPGLYPQQPNYK 1302
Score = 41.6 bits (96), Expect = 0.005
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
QQQ QQQQQ QQQQQQH + G G P P + P +
Sbjct: 58 QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
Query: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392
Q PP PP LL + ++ PP + P G P G
Sbjct: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Score = 33.1 bits (74), Expect = 1.8
Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)
Query: 51 AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109
AMS LG +G + PYG + H Q P G GQ P+ GH +P Q
Sbjct: 1246 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1298
Query: 110 --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154
+ H G +G P + H G + YGG+ G +P
Sbjct: 1299 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1347
Query: 155 HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211
+ Q P + +R PG + +H +P + P +++S G +
Sbjct: 1348 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1394
Query: 212 SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267
+ + + QG + YPG + DM P + E Q P + + RQ
Sbjct: 1395 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1449
Query: 268 GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326
M +A M QP + PQ Q H S R +
Sbjct: 1450 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1495
Query: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366
+ PS P M+ + P P Q PP QPPP PPG
Sbjct: 1496 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1540
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 94.4 bits (233), Expect = 7e-19
Identities = 255/1021 (24%), Positives = 320/1021 (31%), Gaps = 209/1021 (20%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHP 102
GPPGP P P + GM+ +P +G+ G Q +P G G+P
Sbjct: 688 GPPGPPGP-------PGVTGMDGQP---GPKGNV-----GPQGEP------GPPGQQGNP 726
Query: 103 GSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQGP 162
G+ Q P G G P G L G GA G G P EG QGP
Sbjct: 727 GA----QGLPGPQGAIGPPGEKGPLGKPG-LPGMPGADGPPGH--PGKEGPPGEKGGQGP 779
Query: 163 ESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRV 222
GPQ P P + A GL + G P
Sbjct: 780 P--GPQGPIGYPG------------------PRGVKGADGIRGLKGTKGEKGEDGFPGFK 819
Query: 223 TNQGAV-DSLEYNYPGE-------------APSGHFDMFSPSDSEGQL-----PHYAAGR 263
+ G D E PG P+G P +G+L P Y GR
Sbjct: 820 GDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP-GR 878
Query: 264 QVPGGA-----FPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFS 318
Q P G+ FPGA+ G G Q P+ ++ P+ + G
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGG 938
Query: 319 GARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQP--PQQPPQQQ---------PPPPPGL 367
P G G + P P + PP P + P P Q+ PP PPG+
Sbjct: 939 DGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGV 998
Query: 368 LVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVF 427
+ Q P ++G G P + G P L +
Sbjct: 999 VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG---------------------- 1036
Query: 428 SMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLS 487
+ P P P + D PP + FPG G+ G N
Sbjct: 1037 TKGDPGPAGLPGK-----DGPPGLR-------GFPGDRGLPGPVGALGLKGNEGPPGPPG 1084
Query: 488 PSAYPGLPGEFTPPVPDSFPSGP-PLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQ 546
P+ PG G P P P P P P ++ ++ Q + Q
Sbjct: 1085 PAGSPGERGPAGAAGPIGIPGRPGPQGPPGP-------AGEKGAPGEKGPQGPAGRDGLQ 1137
Query: 547 QQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVG-QGGLVHGGPVGGLAQPNFER 605
A + + + +P Q G GD G QG GP G + QP
Sbjct: 1138 GPVGLPGPAGPVGPPGEDGDKGEIGEP--GQKGSKGDKGEQGPPGPTGPQGPIGQPGPSG 1195
Query: 606 EGGSTG-AGRLGTFEQQAPHLAQESAWFSGPHPPPG-DLLP---------RRMGGSGLPA 654
G G G+ G F Q+ + F GP P G LP +G G P
Sbjct: 1196 ADGEPGPRGQQGLFGQKGD---EGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPG 1252
Query: 655 DCGPHDPSLA-----PPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFG--GSLG 707
GP PS A P PPGG G G + E PGE P LP G G G G
Sbjct: 1253 PPGPRGPSGAPGADGPQGPPGGIG--NPGAVGEKGE-PGEAGEPGLPGEGGPPGPKGERG 1309
Query: 708 GLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGP-GVNSP 766
G+ P G P + PP D G GFP G G P GP G + P
Sbjct: 1310 EKGE-SGPSGAAGPPGP----KGPPGDDGPKGSPGPVGFP-GDPGPPGEP--GPAGQDGP 1361
Query: 767 PSAGGGGGSSG-GGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCL 825
P G G G G G P P P +R G P + G
Sbjct: 1362 PGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAG---------PEGRQGEKGAKGE 1412
Query: 826 AALS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGT 883
A L I GAP K P+G R + G G PG
Sbjct: 1413 AGLEGPPGKTGPIGPQGAPG-------KPGPDGLR----------GIPGPVGEQGLPGSP 1455
Query: 884 AP-GAPGPGGPSGTSSSGSKA-SGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG--G 939
P G PGP GP G G K SGP L + G+ G P G G
Sbjct: 1456 GPDGPPGPMGPPGL--PGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSG 1513
Query: 940 GRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPT 999
+G SG + P P G PG PG + A G++ GE G P
Sbjct: 1514 PKGEQGITGPSGPIGP----------PGPPGLPG-PPGPKGAKGSSGPTGPKGEA-GHPG 1561
Query: 1000 P 1000
P
Sbjct: 1562 P 1562
Score = 82.8 bits (203), Expect = 2e-15
Identities = 168/624 (26%), Positives = 214/624 (34%), Gaps = 84/624 (13%)
Query: 579 GHPGDVGQGGLVHG-GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSG-P 635
G PG+ G GL+ GP G P G G G +G + P Q + G P
Sbjct: 673 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP 732
Query: 636 HP-----PPGDLLPR-RMGGSGLPADCGP--HDPSLAPPPPPGGSGVLFRGPLQEPMRMP 687
P PPG+ P + G G+P GP H PP GG G GP Q P+ P
Sbjct: 733 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGP--PGP-QGPIGYP 789
Query: 688 GEGHVPALPS-PGLQFGGSLGGLGQLQSPG--AGVGLPSAASERRPPPPDFATSALG--- 741
G V GL+ G+ G G+ PG +G+ E PP P G
Sbjct: 790 GPRGVKGADGIRGLK--GTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKG 847
Query: 742 -----GQPG--FPFGAAGRQSTPH--SGPGVNSPPSAGGGGGSSGGGG--GGGAYPPQPD 790
G PG P G G+ P PG P + G G G G GG P +P
Sbjct: 848 RGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPG 907
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTF-N 849
+ + + + G KP K N G N P F
Sbjct: 908 PRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPN------GPQGPTGFPG 961
Query: 850 KKNPPEGKRKLSQNETDGA-AVAGNPGSDYFPGGTAPGAP----GPGGPSG-TSSSGSKA 903
K PP K DG G G F G T P P GP GP+G T G +
Sbjct: 962 PKGPPGPPGK------DGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERG 1015
Query: 904 S-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSP-GTFFDK 961
GPP PP + L+ + G G P G RG D G P G K
Sbjct: 1016 HPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGF-PGDRGLPGPVGALGLK 1074
Query: 962 YSAAPDSGGAPGVSPGQQQASGAA--VGGSSAGETRGAP-------TPHEKALTSPSWGK 1012
+ P P SPG++ +GAA +G +G P P EK P+
Sbjct: 1075 GNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRD 1134
Query: 1013 GAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKA 1072
G + +G P G + G D +GE + + ++ PQ +
Sbjct: 1135 GLQGPVG-LPGPAGPV-GPPGEDGDKGEIGE--PGQKGSKGDKGEQGPPGPTGPQGPIGQ 1190
Query: 1073 SRSPLVTGSPKLPPRGVGA-----GEHGPK---APPPALGLGIMSNSTSTPDSYGGGGGP 1124
G P PRG G+ GP+ PP +GL + G G
Sbjct: 1191 PGPSGADGEPG--PRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQM 1248
Query: 1125 GHPGTPGLEQVRTPTSSSGAPPPD 1148
G PG PG P SGAP D
Sbjct: 1249 GPPGPPG------PRGPSGAPGAD 1266
Score = 82.8 bits (203), Expect = 2e-15
Identities = 177/631 (28%), Positives = 206/631 (32%), Gaps = 132/631 (20%)
Query: 579 GHPGDVG-QGGLVHGGPVGGLAQPNFEREGGSTG----AGRLGTFEQQAPHLAQESAWFS 633
G PG VG QG GP+G P G G AG+ GT P
Sbjct: 994 GPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPP 1053
Query: 634 GPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQE--PMRMPGEG 690
G PGD LP +G GL + GP PP P G G RGP P+ +PG
Sbjct: 1054 GLRGFPGDRGLPGPVGALGLKGNEGPP----GPPGPAGSPGE--RGPAGAAGPIGIPGRP 1107
Query: 691 HVPALPSPGLQFG-----GSLGGLGQ--LQSPGAGVGLPSAASERRPPPPDFATSALG-- 741
P P + G G G G+ LQ P VGLP A PP D +G
Sbjct: 1108 GPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGP---VGLPGPAGPVGPPGEDGDKGEIGEP 1164
Query: 742 GQPGFPFGAAGRQSTPH-SGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSA 799
GQ G G G Q P +GP G P G G G G G + + D P R
Sbjct: 1165 GQKGSK-GDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGP--RGFP 1221
Query: 800 SKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRK 859
G + L P + G + +G P PP +
Sbjct: 1222 GPPGPVGLQGLPGPPGEKGETGD-------------VGQMGPPG---------PPGPRGP 1259
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTA----------PGAPGPGGPSGTS--------SSGS 901
DG G PG PG PG PG GGP G S S
Sbjct: 1260 SGAPGADGPQ--GPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPS 1317
Query: 902 KASGPPNP--PAQGDGTSLSPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHV---- 953
A+GPP P P DG SP G+ G P G G G K D G
Sbjct: 1318 GAAGPPGPKGPPGDDGPKGSPGPV--GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTG 1375
Query: 954 SPG-TFFDKYSAAPDSGGAPGVS-----PGQQQASGAAVGGSSAGET------------- 994
SPG T S P G PG + G++ A G A G+T
Sbjct: 1376 SPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPG 1435
Query: 995 ----RGAPTP-HEKALTSPSWGKGAELLLGDQ--PDLIGSLDGGAKSDSSSPNV------ 1041
RG P P E+ L G +G P L G D G K + P +
Sbjct: 1436 PDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKG--DSGPKGEKGHPGLIGLIGP 1493
Query: 1042 -GEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPP 1100
GE E + SS Q + S G P LP GP P
Sbjct: 1494 PGE--QGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLP---------GPPGPK 1542
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPGTPG 1131
A G S T G G PG PG PG
Sbjct: 1543 GAKG---SSGPTGPKGEAGHPGPPGPPGPPG 1570
Score = 82.4 bits (202), Expect = 3e-15
Identities = 163/607 (26%), Positives = 200/607 (32%), Gaps = 98/607 (16%)
Query: 579 GHPGDVGQGGLV----HGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSG 634
G PG GQ G GP G +P +G S G G G ++ P+ Q F G
Sbjct: 904 GKPGPRGQRGPTGPRGERGPRGITGKPG--PKGNSGGDGPAGPPGERGPNGPQGPTGFPG 961
Query: 635 PHPPPGDLLPRRMGGSGLPADCGP--HDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHV 692
P PPG P + G G P G PP PPG G +GP E M GH
Sbjct: 962 PKGPPGP--PGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGP--QGPTGETGPMGERGH- 1016
Query: 693 PALPSPGLQFG--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGA 750
P P P + G G G G PG GLP + PP G PG P GA
Sbjct: 1017 PGPPGPPGEQGLPGLAGKEGTKGDPGPA-GLPG----KDGPPGLRGFPGDRGLPG-PVGA 1070
Query: 751 AGRQST--PHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLG 808
G + P PG P G G++G G G PQ P A + GA
Sbjct: 1071 LGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGP-----AGEKGAPGEK 1125
Query: 809 SFNKPSSKDNLFGQSCLAALSTAC--------QNMIASLGAPNLNVTFNKKNPPEG---K 857
P+ +D L G L + + I G ++ PP +
Sbjct: 1126 GPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQ 1185
Query: 858 RKLSQNETDGA-------------AVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSG 900
+ Q GA G+ G FPG P G PGP G G +
Sbjct: 1186 GPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDV 1245
Query: 901 SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVS-PGTFF 959
+ GPP PP G S +P G G P G G G K + G PG
Sbjct: 1246 GQM-GPPGPPGPR-GPSGAPG-----ADGPQGPP-GGIGNPGAVGEKGEPGEAGEPGL-- 1295
Query: 960 DKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLG 1019
P GG PG G++ G + +AG P + P G G
Sbjct: 1296 ------PGEGGPPGPK-GERGEKGESGPSGAAGPPGPKGPPGDDG---PKGSPGPVGFPG 1345
Query: 1020 DQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVT 1079
D P G G A D + G+ + S E S R P
Sbjct: 1346 D-PGPPGE-PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGP------PGKRGPPGP 1397
Query: 1080 GSPKLPPRGVGA-GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTP 1138
P+ GA GE G + PP G G G PG PG GL + P
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTG------------PIGPQGAPGKPGPDGLRGIPGP 1445
Query: 1139 TSSSGAP 1145
G P
Sbjct: 1446 VGEQGLP 1452
Score = 82.0 bits (201), Expect = 3e-15
Identities = 179/705 (25%), Positives = 230/705 (32%), Gaps = 113/705 (16%)
Query: 486 LSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQ 545
+ P+ G PGE PP P L P P + + + Q+
Sbjct: 486 MGPTGQVGDPGERGPPGRPGLPGADGLPGP-PGTMLMLPFRFGGGGDAGSKGPMVSAQES 544
Query: 546 QQQQQRQNAALMIK----QMASRNQQQRLRQPNLAQL-GHPGDVG-QGGLVHGGPVGGLA 599
Q Q Q A L ++ M + + P L G PGDVG QG GP G
Sbjct: 545 QAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAG 604
Query: 600 QPNFEREGGSTGA----GRLGT-----FEQQAPHLAQE----SAWFSGPHPPPGDLLPR- 645
+P GS GA G+ G F+ A ++ SGP PPGD R
Sbjct: 605 KPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERG 664
Query: 646 ---RMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQF 702
+G GLP + GP L P PPG P PG + P P
Sbjct: 665 DDGEVGPRGLPGEPGPRG-LLGPKGPPG------------PPGPPGVTGMDGQPGPKGNV 711
Query: 703 G--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSG 760
G G G GQ +PGA GLP PP G+PG P
Sbjct: 712 GPQGEPGPPGQQGNPGA-QGLPGPQGAIGPP----GEKGPLGKPGLP-----------GM 755
Query: 761 PGVNSPPSAGGGGGSSGGGGGGGAYPPQ-PDFQPSQRTSASKLGALSLGSFNKPSSKDNL 819
PG + PP G G G GG G PQ P P R G L +D
Sbjct: 756 PGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGF 815
Query: 820 FGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVA--GNPGSD 877
G + +G P ++ PEG + D + G G
Sbjct: 816 PGFKG----DMGIKGDRGEIGPPGP----RGEDGPEGPKGRGGPNGDPGPLGPPGEKGKL 867
Query: 878 YFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSG 937
PG PG PG GP G+ P P A G+ + G GKP
Sbjct: 868 GVPG--LPGYPGRQGPKGS------IGFPGFPGANGE----------KGGRGTPGKP--- 906
Query: 938 GGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGG-APGVSPGQQQASGAAVGGSSAGETRG 996
G RG+ G P K +SGG P PG++ +G G + +G
Sbjct: 907 -GPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQ-GPTGFPGPKG 964
Query: 997 APTPHEK-ALTSPSWGKGAELLLG-----DQPDLIG----SLDGGAKSDSSSPNVGEFAS 1046
P P K L +G G P ++G + + G + P
Sbjct: 965 PPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPG 1024
Query: 1047 DEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSP--KLPPRGVGA----GEHGPKAPP 1100
++ A + E + P L P + G P + P VGA G GP PP
Sbjct: 1025 EQGLPGLAGK-EGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPP 1083
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
G S G G G PG PG + P GAP
Sbjct: 1084 GPAG------SPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAP 1122
Score = 73.2 bits (178), Expect = 2e-12
Identities = 161/610 (26%), Positives = 194/610 (31%), Gaps = 130/610 (21%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTF----EQQAPHLAQESAW-FS 633
G PG G GL GP G + F R GG AG G E QA + Q++
Sbjct: 502 GRPGLPGADGLP--GPPGTMLMLPF-RFGGGGDAGSKGPMVSAQESQAQAILQQARLALR 558
Query: 634 GPHPP------PGDLLPRRMGG-SGLPADCGPHDPS--LAPPPPPGGSGVLFRGPLQEPM 684
GP P PG + P GG G P D GP P PP P G G R
Sbjct: 559 GPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGAR 618
Query: 685 RMPGEGHVPALPSPGLQFGGSLGGL----GQLQSPG-AGVGLPSAASERRPPPPDFATSA 739
MPG+ P F G L GL G PG +G P R +
Sbjct: 619 GMPGQTG----PKGDRGFDG-LAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRG 673
Query: 740 LGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAY----PPQPDFQPSQ 795
L G+PG P G G P PG PP G G G G G PP P
Sbjct: 674 LPGEPG-PRGLLG----PKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGA 728
Query: 796 RTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPE 855
+ GA+ P K L G M + G P K+ PP
Sbjct: 729 QGLPGPQGAIGPPGEKGPLGKPGLPG-------------MPGADGPPGHP---GKEGPP- 771
Query: 856 GKRKLSQNETDGAAVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSSGSKASGPP---NPPA 911
E G G G +PG GA G G GT + P +
Sbjct: 772 -------GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGI 824
Query: 912 QGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGA 971
+GD + P G DG G +GRG D G + P K G
Sbjct: 825 KGDRGEIGP----PGPRGEDGPE----GPKGRGGPNGDPGPLGPPGEKGKLGVP----GL 872
Query: 972 PGVSPGQQQASGA--------AVGGSSAGETRGAPTPH-EKALTSPSWGKGAELLLGDQP 1022
PG PG+Q G+ A G T G P P ++ T P +G + G
Sbjct: 873 PGY-PGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKP- 930
Query: 1023 DLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSP 1082
G K +S D P A R P P
Sbjct: 931 --------GPKGNSGG-------------------------DGP-AGPPGERGP---NGP 953
Query: 1083 KLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSS 1142
+ P G GPK PP G + G G G PG PG+ + PT +
Sbjct: 954 QGP-----TGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGET 1008
Query: 1143 GAPPPDEIHP 1152
G P + HP
Sbjct: 1009 G-PMGERGHP 1017
Score = 68.2 bits (165), Expect = 5e-11
Identities = 148/598 (24%), Positives = 189/598 (31%), Gaps = 113/598 (18%)
Query: 564 RNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQA 622
RN + P P ++G G + + +E GG G G+ G
Sbjct: 410 RNLDENYYDPYYDPTSSPSEIGPGMPANQDTI-------YEGIGGPRGEKGQKGE----- 457
Query: 623 PHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
P + + GP P G +GLP G ++ P G G RGP
Sbjct: 458 PAIIEPGMLIEGPPGPEGP--------AGLPGPPG----TMGPTGQVGDPGE--RGPPGR 503
Query: 683 PMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGG 742
P +PG +P P L GG G S G V SA + A AL G
Sbjct: 504 P-GLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMV---SAQESQAQAILQQARLALRG 559
Query: 743 QPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAY----PPQPDFQPSQRTS 798
G P G GR PG PP +GG G G G G PP P +P +R
Sbjct: 560 PAG-PMGLTGR-------PGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGR 611
Query: 799 ASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPP--EG 856
A GA + P G + L G P + PP +G
Sbjct: 612 AGSDGARGMPGQTGPKGDRGFDGLAGLPGEK-------GHRGDPGPS---GPPGPPGDDG 661
Query: 857 KRKLSQNETDGAAVAGNPGSDYFPGGTA-PGAPGPGGPSGTSSS-GSKAS----GPPNPP 910
+R E + G PG G PG PGP G +G G K + G P PP
Sbjct: 662 ERG-DDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP 720
Query: 911 AQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGG 970
Q + G G P G G K G PG P + G
Sbjct: 721 GQ------------QGNPGAQGLP-GPQGAIGPPGEKGPLG--KPG-----LPGMPGADG 760
Query: 971 APGVSPGQQQASGAAVGGSSAGETRGAPTPHEK-ALTSPSWGKGAELLLGDQPDLIGSLD 1029
PG PG++ G G +G P P P KGA+ + G +
Sbjct: 761 PPG-HPGKEGPPGEKGG-------QGPPGPQGPIGYPGPRGVKGADGIRGLK-------- 804
Query: 1030 GGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGV 1089
G K + F D + D + R PK RG
Sbjct: 805 -GTKGEKGEDGFPGFKGD-----------MGIKGDRGEIGPPGPRGEDGPEGPK--GRGG 850
Query: 1090 GAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
G+ GP PP G + P G G G PG PG + + G P P
Sbjct: 851 PNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 908
Score = 53.5 bits (127), Expect = 1e-06
Identities = 74/243 (30%), Positives = 89/243 (36%), Gaps = 37/243 (15%)
Query: 578 LGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPH 636
+G PGD G G GP G P + + G G G G + P GP
Sbjct: 1341 VGFPGDPGPPG--EPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPA 1398
Query: 637 PPPGDLLPRRMGGS----GLPADCGPHDPSLAP--PPPPGGSGVLFRGPLQE-------- 682
P G + G G P GP P AP P P G G+ GP+ E
Sbjct: 1399 GPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGI--PGPVGEQGLPGSPG 1456
Query: 683 PMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPG--AGVGLPSAASER--RPPPPDFATS 738
P PG P LP GL+ G G G+ PG +G P E+ R P +S
Sbjct: 1457 PDGPPGPMGPPGLP--GLK--GDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1512
Query: 739 ALGGQPGF--PFGAAGRQSTPHSGPGVNSPPSAGGGGGSSG----GGGGGGAYPPQPDFQ 792
G+ G P G G P PG+ PP G GSSG G G PP P
Sbjct: 1513 GPKGEQGITGPSGPIG----PPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGP 1568
Query: 793 PSQ 795
P +
Sbjct: 1569 PGE 1571
Score = 50.8 bits (120), Expect = 8e-06
Identities = 178/722 (24%), Positives = 226/722 (31%), Gaps = 120/722 (16%)
Query: 9 PQVNSRNAGQ----GERNFNETGLSMNTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMN 64
P+ NS G GER N G T F P GPPGP P L P G
Sbjct: 932 PKGNSGGDGPAGPPGERGPN--GPQGPTGFPGPK----GPPGP--PGKDGLPGHP--GQR 981
Query: 65 MEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHP--HQHHPHFGGNFGGP- 121
E GF + G + Q G G GHPG P Q P G G
Sbjct: 982 GET-GFQGKTGPPGPPGVVGPQGPTGETG-PMGERGHPGPPGPPGEQGLPGLAGKEGTKG 1039
Query: 122 DPGASCLHGGRLLGYGGAAGGLGSQP-PFAEGYEHMAESQGPESFGPQRPGNLPDFHSSG 180
DPG + L G G G G G + P G + ++GP GP P P
Sbjct: 1040 DPGPAGLPGKD--GPPGLRGFPGDRGLPGPVGALGLKGNEGPP--GPPGPAGSPGERGPA 1095
Query: 181 ASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEA- 239
++ + P P Q P A G P G + R QG V PG A
Sbjct: 1096 GAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPA---GRDGLQGPV-----GLPGPAG 1147
Query: 240 PSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQ 299
P G P +G Q G P G G QP
Sbjct: 1148 PVG------PPGEDGDKGEIGEPGQKGSKGDKGEQGPP---GPTGPQGPIGQPGPSGADG 1198
Query: 300 QQQPQQQQQQHGVFFER-FSGARKMP--------VGLEPSVGSRHPLMQPPQQAP--PPP 348
+ P+ QQ G+F ++ G R P GL G + Q P PP
Sbjct: 1199 EPGPRGQQ---GLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPG 1255
Query: 349 QQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFE 408
+ P P P PPG + + + + GEAG P G +GGP P
Sbjct: 1256 PRGPSGAPGADGPQGPPGGIGNPGAVG---EKGEPGEAGEP-GLPGEGGPPGPK------ 1305
Query: 409 YPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVD 468
R S P + P P+ P D P FPG G
Sbjct: 1306 ------GERGEKGESGPSGAAGPPGPKGPPGD-----DGPK----GSPGPVGFPGDPGPP 1350
Query: 469 RCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVP--DSFPSGPPLQHPAPDHQSLQQQQ 526
G D G PG+ P P + PSGPP + P
Sbjct: 1351 ------GEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAG----- 1399
Query: 527 QQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQ 586
+ +Q ++ + + + + + + + LR G PG VG+
Sbjct: 1400 ----PEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR-------GIPGPVGE 1448
Query: 587 GGLVHG-------GPVGGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPHPP 638
GL GP+G P + + G G G G P Q G P
Sbjct: 1449 QGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGP 1508
Query: 639 PGDLLPRRMGGSGLPADCGPHDPSLAP--PPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
G P+ G G+ GP P P P PPG G +G P GE P P
Sbjct: 1509 QGSSGPK--GEQGITGPSGPIGPPGPPGLPGPPGPKGA--KGS-SGPTGPKGEAGHPGPP 1563
Query: 697 SP 698
P
Sbjct: 1564 GP 1565
Score = 41.2 bits (95), Expect = 0.007
Identities = 96/399 (24%), Positives = 121/399 (30%), Gaps = 82/399 (20%)
Query: 37 PAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQ 96
P GPPGP PA L PP M P G ++ G + P G
Sbjct: 463 PGMLIEGPPGPEGPA--GLPGPP---GTMGPTG-------QVGDPGERGPPGRPGLPGAD 510
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPDPGASC--------LHGGRL--------LGYGGAA 140
G PG+ GG+ G P S L RL +G G
Sbjct: 511 GLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRP 570
Query: 141 GGLGSQPPFAEGYEHMAESQGPES----FGPQRPGNLPDFHSSGASSHAVPAPCLPLDQS 196
G +G PP + G + GP+ GP P P S A +P
Sbjct: 571 GPVG--PPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSD---GARGMPGQTG 625
Query: 197 PNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL 256
P F GL G H +P P P D D
Sbjct: 626 PKGDRGFDGLAGLPGEKGHRGDPG---------------PSGPPGPPGDDGERGDDGEVG 670
Query: 257 PHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP-PQQQPQQQQQPQQQQQQHGVFFE 315
P G P G G P G G++ M QP P+ Q +P QQ +
Sbjct: 671 PRGLPGEPGPRGLL-GPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQ 729
Query: 316 RFSGARKMPVGLEPSVGSRHPLMQPPQQAPP--------PPQQQPPQQPPQQQPPPPPGL 367
G P G G + PL +P P P ++ PP + Q PP P G
Sbjct: 730 GLPG----PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQG- 784
Query: 368 LVRQNSCPPALPRPQ--------QGEAGTPSGGLQDGGP 398
P P P+ +G GT +DG P
Sbjct: 785 -------PIGYPGPRGVKGADGIRGLKGTKGEKGEDGFP 816
Score = 40.4 bits (93), Expect = 0.011
Identities = 64/273 (23%), Positives = 84/273 (30%), Gaps = 58/273 (21%)
Query: 885 PGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGND------------- 931
P PG G TS++ + S P PP L +T E+ D
Sbjct: 367 PTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSS 426
Query: 932 ------GKPVSG-------GGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQ 978
G P + GG RG +K + + PG + G PG PG
Sbjct: 427 PSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPG-PPGT 485
Query: 979 QQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSS 1038
+G G P L P G L+L P G GG + S
Sbjct: 486 MGPTGQVGDPGERGPPGRPGLPGADGLPGPP---GTMLML---PFRFG---GGGDAGSKG 536
Query: 1039 PNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKA 1098
P V S+ QA+++ +R L P G+ G GP
Sbjct: 537 PMV------------------SAQESQAQAILQQARLAL---RGPAGPMGL-TGRPGPVG 574
Query: 1099 PPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPG 1131
PP + GL G G PG G PG
Sbjct: 575 PPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPG 607
Score = 40.0 bits (92), Expect = 0.015
Identities = 73/295 (24%), Positives = 91/295 (30%), Gaps = 59/295 (20%)
Query: 872 GNPGSDYFPGGTAPGAPGPGGP--------SGTSSSGSKASGPPNPPAQGDGTSLSPNYT 923
G PG PG A G PGP G G +GSK +Q
Sbjct: 499 GPPGRPGLPG--ADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA 556
Query: 924 LESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS--PGQQ 979
L +G G G G G G K + G V P G PG + PG++
Sbjct: 557 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGP-------QGPRGVQGPPGPAGKPGRR 609
Query: 980 QASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSP 1039
G + + RG P T P +G + L G + D G P
Sbjct: 610 -------GRAGSDGARGMP-----GQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPP 657
Query: 1040 -NVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKA 1098
+ GE D P+ L P PK PP GP
Sbjct: 658 GDDGERGDD--------------GEVGPRGL-PGEPGPRGLLGPKGPP--------GPPG 694
Query: 1099 PPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPL 1153
PP G+ G G PG G PG + + P + G PP E PL
Sbjct: 695 PPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIG--PPGEKGPL 747
Score = 32.0 bits (71), Expect = 4.0
Identities = 51/220 (23%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 996 GAPTPHEKALTS------PSWGKGAELLLGD-QPDLIGSLDGGAKSDSSSPNVGEFASDE 1048
GA P A TS P G+GA+ L G+ + I +LD P + E
Sbjct: 373 GAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTS---SPSE 429
Query: 1049 VSTSY-ANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGI 1107
+ AN+D + P+ P + + P + G GP+ P G
Sbjct: 430 IGPGMPANQDTIYEGIGGPRGEKGQKGEPAI-----IEPGMLIEGPPGPEGPAGLPGPPG 484
Query: 1108 MSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSS---------SGAPPPDEIHPLEILQA 1158
T G G PG PG PG + + P + G + + ++
Sbjct: 485 TMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQES 544
Query: 1159 QIQLQRQQFSISEDQPLGLKG--GKKGECAVGASGAQNGD 1196
Q Q QQ ++ P G G G+ G SG G+
Sbjct: 545 QAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGE 584
>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
Length = 690
Score = 94.4 bits (233), Expect = 7e-19
Identities = 152/561 (27%), Positives = 200/561 (35%), Gaps = 118/561 (21%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG PA P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG--G 1180
GHPG+PG + + T +G+P P P P GL+G G
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSPVPGLPGP----------------EGPPGPPGLQGVPG 571
Query: 1181 KKGECAV-GASGAQNGDSELG 1200
KGE + GA G + E G
Sbjct: 572 PKGEAGLDGAKGEKGFQGEKG 592
Score = 57.4 bits (137), Expect = 9e-08
Identities = 141/552 (25%), Positives = 177/552 (32%), Gaps = 97/552 (17%)
Query: 271 PGASAMPRAAGMVGLSKMHAQPPQQQ------PQQQQQPQQQQQQHGVFFE--RFSGARK 322
PG P G +GL P + P Q PQ Q+ + G E
Sbjct: 165 PGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSS 224
Query: 323 MPVGLEPS---VGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ--------PPPPPGLLVRQ 371
MP L S PL+ + APPP ++ Q Q Q PP PPG
Sbjct: 225 MPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPG----- 279
Query: 372 NSCP---PALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFS 428
S P P LP P G G P G P + H R R M P
Sbjct: 280 PSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHG-------RKGERGM-----PGMP 326
Query: 429 MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRF--DFPGSAGVDRCASWNGSMHNGALDNHL 486
+H + AP + P + K + PG G+ G N
Sbjct: 327 GKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRG 385
Query: 487 SPSAYPGLPGEFTPPVPDSFPS-----GPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQ 541
P PGLPG PP P GPP Q P + +Q + + + +
Sbjct: 386 EPGP-PGLPG---PPGPKGEAGVDGQVGPPGQ-PGDKGERGAAGEQGPDGPKGSKGEPGK 440
Query: 542 QQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGHPGDVGQGGLVHGGPVGGLAQ 600
+ A I+ +A + P L Q+G PG G G G +G
Sbjct: 441 GEMVDYNGNINEALQEIRTLAL------MGPPGLPGQIGPPGAPGIPG--QKGEIGLPGP 492
Query: 601 PNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPH 659
P + E G G G +G Q P G + PG P G G G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS--PGEKGEKGETGQAGSP 550
Query: 660 DPSL----APPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSP 715
P L PP PPG GV GP E +G F G G G L P
Sbjct: 551 VPGLPGPEGPPGPPGLQGV--PGPKGEAGLDGAKGEKG--------FQGEKGDRGPLGLP 600
Query: 716 GAG--VGLPSAASERRPPPPDFATSALGGQPGF--PFGAAGRQSTPHSGPGVNSPPSAGG 771
G +G+P A + G PG P GAAG PG++ PP G
Sbjct: 601 GTPGPIGVPGPAGPK-------GERGSKGDPGMTGPTGAAGL-------PGLHGPPGDKG 646
Query: 772 GGGSSGGGGGGG 783
G G G G
Sbjct: 647 NRGERGKKGSRG 658
Score = 55.5 bits (132), Expect = 3e-07
Identities = 140/556 (25%), Positives = 172/556 (30%), Gaps = 84/556 (15%)
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCG-PHDPSLA---PPPPPGGSGVL----FRGP--LQ 681
F GP PG LP G G+P G P D L+ P PPG G F GP L
Sbjct: 123 FQGPTGRPG--LPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD 180
Query: 682 EPMRMPGEGHVPALPSPGLQFG--GSLGGLGQ---------LQSPGAGVG---------L 721
PG L P Q G G G GQ L S A + L
Sbjct: 181 GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL 240
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P S R PPP G+ Q++ PG PP G G G G
Sbjct: 241 PLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPSGPLGHPGLPGP 292
Query: 782 GGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G PP P P + + G + G K +K A A M
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK---------GAPGIAVAGMK 343
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGT 896
G P + P L Q G A G PG PG PGP GP G
Sbjct: 344 GEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PPGLPGPPGPKGE 401
Query: 897 SSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPG 956
+ + GPP P + + G+ G+P G+G +G+++
Sbjct: 402 AGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGEMVDYNGNINEA 453
Query: 957 TFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAEL 1016
+ A G PG+ PGQ GA GE G P P KG
Sbjct: 454 LQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI-GLPGP-----PGHDGEKGPRG 503
Query: 1017 LLGDQ----PDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYANEDEVS-SSSDNPQAL 1069
GD P DG G K ++ P ++ T A + P
Sbjct: 504 KPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGP 563
Query: 1070 VKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGT 1129
P G L G G K LGL P G G G G
Sbjct: 564 PGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGD 623
Query: 1130 PGLEQVRTPTSSSGAP 1145
PG+ PT ++G P
Sbjct: 624 PGM---TGPTGAAGLP 636
Score = 42.7 bits (99), Expect = 0.002
Identities = 84/371 (22%), Positives = 104/371 (28%), Gaps = 108/371 (29%)
Query: 579 GHPGDVGQGGLVH----GGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSG 634
G PGD G+ G GP G +P G G + + QE +
Sbjct: 412 GQPGDKGERGAAGEQGPDGPKGSKGEP---------GKGEMVDYNGNINEALQEIRTLAL 462
Query: 635 PHPP--PGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHV 692
PP PG + P G G+P G + P PPG G +GP +P
Sbjct: 463 MGPPGLPGQIGPP--GAPGIPGQKG----EIGLPGPPGHDGE--KGPRGKP--------- 505
Query: 693 PALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPP--PPDFATSALGGQPGFPFGA 750
G +G G PG G P E P P + GQ G P
Sbjct: 506 -----------GDMGPPGPQGPPGKD-GPPGVKGENGHPGSPGEKGEKGETGQAGSPVPG 553
Query: 751 AGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSF 810
P PG+ P G G G G G + D P
Sbjct: 554 LPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGP----------------- 596
Query: 811 NKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNP--PEGKRKLSQNETDGA 868
LG P P P+G+R
Sbjct: 597 ----------------------------LGLPGTPGPIGVPGPAGPKGER---------- 618
Query: 869 AVAGNPGSDYFPGGT-APGAPGPGGPSGTSSS-GSKASGPPNPPAQGDGTSLSPNYTLES 926
G+ G G T A G PG GP G + G + P G +P
Sbjct: 619 ---GSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 675
Query: 927 TSGNDGKPVSG 937
G DG PV G
Sbjct: 676 PLGEDGLPVQG 686
Score = 35.4 bits (80), Expect = 0.36
Identities = 97/391 (24%), Positives = 125/391 (31%), Gaps = 53/391 (13%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-VHGFFG--GQQPHH 99
GPPGP P+ LG P + G M P G G + P + G+ G G++
Sbjct: 273 GPPGPPGPS-GPLGHPGLPGP-MGPPGLPG-------PPGPKGDPGIQGYHGRKGERGMP 323
Query: 100 GHPGSHHPHQHHPHFG--GNFGGPD-PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG H + P G G P PG G G G G LG + + +
Sbjct: 324 GMPGKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAE--GSPGLPGLLGQKGEKGDAGNSI 380
Query: 157 AESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHS 216
+G E P PG +G P P P D+ AA G GS
Sbjct: 381 GGGRG-EPGPPGLPGPPGPKGEAGVDGQVGP-PGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 217 LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHYAAGRQVPGGAFPGASA 275
+ V G ++ A G P GQ+ P A G +PG G
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMG------PPGLPGQIGPPGAPG--IPGQK--GEIG 488
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF---SGARKMPVGLEPSVG 332
+P G G +P P Q P + GV E S K G G
Sbjct: 489 LPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAG 548
Query: 333 SRHPLMQPPQQAPPPPQQQPPQQPPQQQ-------------------PPPPPGLLVRQNS 373
S P + P+ P PP Q P + P PG
Sbjct: 549 SPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGV 608
Query: 374 CPPALPRPQQGEAGTPSGGLQDGGPMLPSQH 404
PA P+ ++G G P G LP H
Sbjct: 609 PGPAGPKGERGSKGDPGMTGPTGAAGLPGLH 639
Score = 31.2 bits (69), Expect = 6.9
Identities = 60/261 (22%), Positives = 87/261 (33%), Gaps = 41/261 (15%)
Query: 262 GRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGAR 321
GR PG PG P G G+ P Q + ++ +Q G G++
Sbjct: 383 GRGEPGP--PGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGP-----KGSK 435
Query: 322 KMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSC----PPA 377
P G V + + Q+ PP P Q PP PG+ ++ PP
Sbjct: 436 GEP-GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Query: 378 L-----PRPQQGEAGTP---SGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSM 429
PR + G+ G P +DG P + ++ P + E PV +
Sbjct: 495 HDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGL 554
Query: 430 QHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPS 489
P P+ P PP + P+ G AG+D G P
Sbjct: 555 --PGPEGPP--------GPPGLQGVPGPK----GEAGLDGAKGEKGFQGE---KGDRGPL 597
Query: 490 AYPGLPGEFTPPVPDSFPSGP 510
PG PG P+ P+GP
Sbjct: 598 GLPGTPG----PIGVPGPAGP 614
>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
Length = 702
Score = 94.4 bits (233), Expect = 7e-19
Identities = 152/561 (27%), Positives = 200/561 (35%), Gaps = 118/561 (21%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG PA P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG--G 1180
GHPG+PG + + T +G+P P P P GL+G G
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSPVPGLPGP----------------EGPPGPPGLQGVPG 571
Query: 1181 KKGECAV-GASGAQNGDSELG 1200
KGE + GA G + E G
Sbjct: 572 PKGEAGLDGAKGEKGFQGEKG 592
Score = 58.5 bits (140), Expect = 4e-08
Identities = 137/548 (25%), Positives = 167/548 (30%), Gaps = 78/548 (14%)
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCG-PHDPSLA---PPPPPGGSGVL----FRGP--LQ 681
F GP PG LP G G+P G P D L+ P PPG G F GP L
Sbjct: 123 FQGPTGRPG--LPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD 180
Query: 682 EPMRMPGEGHVPALPSPGLQFG--GSLGGLGQ---------LQSPGAGVG---------L 721
PG L P Q G G G GQ L S A + L
Sbjct: 181 GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL 240
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P S R PPP G+ Q++ PG PP G G G G
Sbjct: 241 PLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPSGPLGHPGLPGP 292
Query: 782 GGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G PP P P + + G + G K +K A A M
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK---------GAPGIAVAGMK 343
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGT 896
G P + P L Q G A G PG PG PGP GP G
Sbjct: 344 GEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PPGLPGPPGPKGE 401
Query: 897 SSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPG 956
+ + GPP P + + G+ G+P G+G +G+++
Sbjct: 402 AGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGEMVDYNGNINEA 453
Query: 957 TFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAEL 1016
+ A G PG+ PGQ GA GE L P G +
Sbjct: 454 LQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI---------GLPGPPGHDGEKG 500
Query: 1017 LLGDQPDLIGSLDGGAKSDSSSPNV-GEFASDEVSTSYANEDEVSSSSDNPQALVKASRS 1075
G D+ G P V GE + E + L
Sbjct: 501 PRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGP 560
Query: 1076 PLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
P G +P AG G K G P + G G PG PGTPG V
Sbjct: 561 PGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 620
Query: 1136 RTPTSSSG 1143
P G
Sbjct: 621 PGPAGPKG 628
Score = 57.8 bits (138), Expect = 7e-08
Identities = 144/558 (25%), Positives = 177/558 (31%), Gaps = 97/558 (17%)
Query: 271 PGASAMPRAAGMVGLSKMHAQPPQQQ------PQQQQQPQQQQQQHGVFFE--RFSGARK 322
PG P G +GL P + P Q PQ Q+ + G E
Sbjct: 165 PGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSS 224
Query: 323 MPVGLEPS---VGSRHPLMQPPQQAPPPPQQQPPQQPPQQQ--------PPPPPGLLVRQ 371
MP L S PL+ + APPP ++ Q Q Q PP PPG
Sbjct: 225 MPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPG----- 279
Query: 372 NSCP---PALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFS 428
S P P LP P G G P G P + H R R M P
Sbjct: 280 PSGPLGHPGLPGPM-GPPGLPGPPGPKGDPGIQGYHG-------RKGERGM-----PGMP 326
Query: 429 MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRF--DFPGSAGVDRCASWNGSMHNGALDNHL 486
+H + AP + P + K + PG G+ G N
Sbjct: 327 GKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRG 385
Query: 487 SPSAYPGLPGEFTPPVPDSFPS-----GPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQ 541
P PGLPG PP P GPP Q P + +Q + + + +
Sbjct: 386 EPGP-PGLPG---PPGPKGEAGVDGQVGPPGQ-PGDKGERGAAGEQGPDGPKGSKGEPGK 440
Query: 542 QQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNL-AQLGHPGDVGQGGLVHGGPVGGLAQ 600
+ A I+ +A + P L Q+G PG G G G +G
Sbjct: 441 GEMVDYNGNINEALQEIRTLAL------MGPPGLPGQIGPPGAPGIPG--QKGEIGLPGP 492
Query: 601 PNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPH 659
P + E G G G +G Q P G + PG P G G G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGS--PGEKGEKGETGQAGSP 550
Query: 660 DPSL----APPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSP 715
P L PP PPG GV GP E +G F G G G L P
Sbjct: 551 VPGLPGPEGPPGPPGLQGV--PGPKGEAGLDGAKGEKG--------FQGEKGDRGPLGLP 600
Query: 716 GAGVGLPSAASERRPPPPDFATSALG--------GQPGF--PFGAAGRQSTPHSGPGVNS 765
GA GL P P G G PG P GAAG PG++
Sbjct: 601 GAS-GLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGL-------PGLHG 652
Query: 766 PPSAGGGGGSSGGGGGGG 783
PP G G G G G
Sbjct: 653 PPGDKGNRGERGKKGSRG 670
Score = 57.0 bits (136), Expect = 1e-07
Identities = 98/378 (25%), Positives = 124/378 (32%), Gaps = 45/378 (11%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFER--EGGSTGAGR--LGTFEQQAPHLAQESAWFSG 634
G PG G+ G + GL E+ G S G GR G P + A G
Sbjct: 347 GIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDG 406
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG P G G + GP P + P G V + G + E ++ E A
Sbjct: 407 QVGPPGQ--PGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ---EIRTLA 461
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQPGFPFGAAG 752
L P G GQ+ PGA G+P E P P G G+PG G G
Sbjct: 462 LMGPP-------GLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDGEKGPRGKPG-DMGPPG 512
Query: 753 RQSTP-HSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQ---PDFQPSQRTSASKLGA 804
Q P GP G N P + G G G G G+ P P+ P G
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGP 572
Query: 805 LSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNE 864
+ + G+ + LG P + + PP +
Sbjct: 573 KGEAGLDGAKGEKGFQGE----------KGDRGPLGLPGASGLDGRPGPPGTPGPIGVPG 622
Query: 865 TDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSS-GSKASGPPNPPAQGDGTSLS 919
G G GS PG T P G PG GP G + G + P G +
Sbjct: 623 PAGPK--GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 680
Query: 920 PNYTLESTSGNDGKPVSG 937
P G DG PV G
Sbjct: 681 PGLDAPCPLGEDGLPVQG 698
Score = 37.7 bits (86), Expect = 0.073
Identities = 93/388 (23%), Positives = 123/388 (31%), Gaps = 62/388 (15%)
Query: 43 GPPGPV-DPAMSAL-GEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHG 100
GPPGP DP + G GM P A+G + G++ +P G++ G
Sbjct: 300 GPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEG 359
Query: 101 HPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQ 160
PG P G G + + GGR G G G G PP +G +
Sbjct: 360 SPGL-------PGLLGQKGEKGDAGNSIGGGR--GEPGPPGLPG--PPGPKGEAGVDGQV 408
Query: 161 GPESFGPQRPGNLPDFHSSGAS-------SHAVPAPCLPLDQSPN--------RAASFHG 205
GP P +PG+ + ++G S P +D + N R + G
Sbjct: 409 GP----PGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMG 464
Query: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL----PHYAA 261
P G P +G E PG P GH P G + P
Sbjct: 465 PPGLPGQIGPPGAPGIPGQKG-----EIGLPG--PPGHDGEKGPRGKPGDMGPPGPQGPP 517
Query: 262 GRQVPGGAFPGASAMPRAAGMVGLSKMHAQ-----PPQQQPQQQQQPQQQQQQHGVFFER 316
G+ P G G + P + G G Q P P+ P Q G E
Sbjct: 518 GKDGPPGV-KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEA 576
Query: 317 FSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPP 376
K G + G R PL P P P P PG P
Sbjct: 577 GLDGAKGEKGFQGEKGDRGPLGLPGASG----LDGRPGPPGTPGPIGVPG---------P 623
Query: 377 ALPRPQQGEAGTPSGGLQDGGPMLPSQH 404
A P+ ++G G P G LP H
Sbjct: 624 AGPKGERGSKGDPGMTGPTGAAGLPGLH 651
Score = 35.0 bits (79), Expect = 0.48
Identities = 91/352 (25%), Positives = 118/352 (33%), Gaps = 54/352 (15%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-VHGFFG--GQQPHH 99
GPPGP P+ LG P + G M P G G + P + G+ G G++
Sbjct: 273 GPPGPPGPS-GPLGHPGLPGP-MGPPGLPG-------PPGPKGDPGIQGYHGRKGERGMP 323
Query: 100 GHPGSHHPHQHHPHFG--GNFGGPD-PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG H + P G G P PG G G G G LG + + +
Sbjct: 324 GMPGKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAE--GSPGLPGLLGQKGEKGDAGNSI 380
Query: 157 AESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHS 216
+G E P PG +G P P P D+ AA G GS
Sbjct: 381 GGGRG-EPGPPGLPGPPGPKGEAGVDGQVGP-PGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 217 LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHYAAGRQVPGGAFPGASA 275
+ V G ++ A G P GQ+ P A G +PG G
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMG------PPGLPGQIGPPGAPG--IPGQK--GEIG 488
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRH 335
+P G G +P P Q P + GV E G S G +
Sbjct: 489 LPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGEN---------GHPGSPGEKG 539
Query: 336 PLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAG 387
+ Q P P P+ P P PPGL +P P +GEAG
Sbjct: 540 EKGETGQAGSPVPGLPGPEGP-----PGPPGL--------QGVPGP-KGEAG 577
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 94.0 bits (232), Expect = 9e-19
Identities = 283/1163 (24%), Positives = 360/1163 (30%), Gaps = 255/1163 (21%)
Query: 43 GPPGPVDPAMSA--LGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFG-----GQ 95
G PGP+ P S G P G + EP R + G + GF G G
Sbjct: 243 GDPGPMGPIGSRGPEGPPGKPGEDGEP----GRNGNPGEVGFAGSPGARGFPGAPGLPGL 298
Query: 96 QPHHGHPGSHHPHQH--HPHFGGNFGGPDP-GASCLHGGRLLGYGGAAGGLGSQ-PPFAE 151
+ H GH G P P G G P GA G R G G G LG Q P
Sbjct: 299 KGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPR--GMPGERGRLGPQGAPGQR 356
Query: 152 GYEHMAESQGP--------ESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASF 203
G M GP S P PG + +GA P P S
Sbjct: 357 GAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGS- 415
Query: 204 HGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQLPHYAAG 262
GLP + G+D PG + P+G P S G
Sbjct: 416 PGLPGAIGTDGT--------------------PGAKGPTGSPGTSGPPGSAGP------- 448
Query: 263 RQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARK 322
PG P S P+ G+ P + + P+ + HG+ +
Sbjct: 449 ---PGSPGPQGSTGPQ-----GIRGQPGDPGVPGFKGEAGPKGEPGPHGI---------Q 491
Query: 323 MPVGLEPSVGSRHPLMQPPQQAPPPP--QQQPPQQ---PPQQQPPPPPGLLVRQNSCPPA 377
P+G G R P P PP P ++ P P P P G + +
Sbjct: 492 GPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSS 551
Query: 378 LPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
P+ QG+ G P G P LP P + + P P + PP
Sbjct: 552 GPKGSQGDPGRP------GEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSI 605
Query: 438 PNQRLQHFDAPPYMNV-AKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG 496
+ P M + + PG G A G D + PS G PG
Sbjct: 606 GIR-----GQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG 660
Query: 497 ------EFTPPVPDSF-----PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQ 545
E PP P F P GPP + P Q + + ++ ++
Sbjct: 661 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG 720
Query: 546 QQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGL--------VHGGPV-- 595
+ K MA + + + G PGD G GL + G P
Sbjct: 721 EPGITGLPGE---KGMAGGHGPDGPKG-SPGPSGTPGDTGPPGLQGMPGERGIAGTPGPK 776
Query: 596 ---GGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRM---- 647
GG+ + E G+ GA G G P +GP G+ PR +
Sbjct: 777 GDRGGIGEKGAEGTAGNDGARGLPGPLGPPGP---------AGPTGEKGEPGPRGLVGPP 827
Query: 648 GGSGLPADCGPHDPSLA-----PPPPPGGSGVLFRGPLQEPMRM-----PGEGHVPALPS 697
G G P G + P+ A P P G GV +G EP + PG + P
Sbjct: 828 GSRGNPGSRGENGPTGAVGFAGPQGPDGQPGV--KGEPGEPGQKGDAGSPGPQGLAGSPG 885
Query: 698 PGLQFG--GSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQS 755
P G G GG G PGA G P +A PP P G PG P G G
Sbjct: 886 PHGPNGVPGLKGGRGTQGPPGA-TGFPGSAGRVGPPGP-------AGAPG-PAGPLGE-- 934
Query: 756 TPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSS 815
PG PP G GS G G G P P P +
Sbjct: 935 -----PGKEGPPGLRGDPGSHGRVGDRG--PAGPPGGPGDK------------------- 968
Query: 816 KDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPG 875
G P + PP Q + G PG
Sbjct: 969 ------------------------GDPGEDGQPGPDGPPGPAGTTGQR-----GIVGMPG 999
Query: 876 SDYFPGGTAPGAPGPGGPSG----TSSSGSKASGPPNP--PAQGDGTSLSPNYTLESTSG 929
G PG PGP G G T ++G K GPP P P +G P E +G
Sbjct: 1000 QRGERG--MPGLPGPAGTPGKVGPTGATGDK--GPPGPVGPPGSNGPVGEPGP--EGPAG 1053
Query: 930 NDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGS 989
NDG P G RG D G P + P S GAPG +PG A G A
Sbjct: 1054 NDGTPGRDGAVGERG----DRGDPGP-------AGLPGSQGAPG-TPGPVGAPGDAGQRG 1101
Query: 990 SAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEV 1049
G +RG P +A G L G Q D G + D F +
Sbjct: 1102 DPG-SRGPIGPPGRA--------GKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQG 1152
Query: 1050 STSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG-AGEHGPKAPPPALGLGIM 1108
+ S+ P P+ PP VG +G+ G P +G +
Sbjct: 1153 LPGPPGPNGEQGSAGIPGPF-----------GPRGPPGPVGPSGKEGNPGPLGPIGPPGV 1201
Query: 1109 SNSTSTPDSYGGGGGPGHPGTPG 1131
S G G PG PG PG
Sbjct: 1202 RGSVGEAGPEGPPGEPGPPGPPG 1224
Score = 85.1 bits (209), Expect = 4e-16
Identities = 176/680 (25%), Positives = 222/680 (32%), Gaps = 116/680 (17%)
Query: 579 GHPGDVGQGGLVH--GGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPH 636
GHP G GL + GL + + G +G + P Q +GP
Sbjct: 177 GHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPT 236
Query: 637 PPPGDLLPRRMGGSGLPADCGPHDP--SLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG+ P D GP P S P PPG G EP R G V
Sbjct: 237 GPPGE-----------PGDPGPMGPIGSRGPEGPPGKPG-----EDGEPGRNGNPGEVGF 280
Query: 695 LPSPGLQ-FGGSLG--------GLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQ 743
SPG + F G+ G G L+ P VG P + E P P A LG G
Sbjct: 281 AGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGM 340
Query: 744 PGF-----PFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTS 798
PG P GA G++ H PG P G GSSG G P +
Sbjct: 341 PGERGRLGPQGAPGQRGA-HGMPGKPGPMGPLGIPGSSGFPGN-----------PGMKGE 388
Query: 799 ASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKR 858
A GA P G++ +G+P L P K
Sbjct: 389 AGPTGARG------PEGPQGQRGET----------GPPGPVGSPGLPGAIGTDGTPGAKG 432
Query: 859 KLSQNETDGA-AVAGNPGSDYFPGGTAP----GAPG-PGGPSGTSSSGSKAS-------G 905
T G AG PGS G T P G PG PG P +G K G
Sbjct: 433 PTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQG 492
Query: 906 PPNPPAQ-------GDGTSLSPNYTL--ESTSGNDGKPVSGG--GGRGRGRRKRDSGHVS 954
P PP + GD ++ P + GN G P S G G +G + G
Sbjct: 493 PIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSG 552
Query: 955 P-GTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKG 1013
P G+ D P G PG+ PG + +G G+ P E P G
Sbjct: 553 PKGSQGD-----PGRPGEPGL-PGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIG 606
Query: 1014 AELLLGDQPDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYANED-EVSSSSD-NPQAL 1069
+ QP +G L G G+ D P A +D EV S P L
Sbjct: 607 ----IRGQPGSMG-LPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGL 661
Query: 1070 V--KASRSPL-------VTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGG 1120
+ + P + G P P G G+ G P A+G P G
Sbjct: 662 AGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGE 721
Query: 1121 GGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGG 1180
G G PG G+ P G+P P P + +Q + I+ G KG
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGT-PGDTGPPGLQGMPGERGIAGTP--GPKGD 778
Query: 1181 KKGECAVGASGAQNGDSELG 1200
+ G GA G D G
Sbjct: 779 RGGIGEKGAEGTAGNDGARG 798
Score = 82.4 bits (202), Expect = 3e-15
Identities = 233/930 (25%), Positives = 288/930 (30%), Gaps = 146/930 (15%)
Query: 324 PVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQ 383
P GL+ G P P + P P + P+ PP PG ++ P P +
Sbjct: 223 PQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEG-PPGKPG----EDGEPGRNGNPGE 277
Query: 384 -GEAGTPSGGLQDGGPMLPSQ-----HAQFEYPIHRLENRSMHPYSEPVFSMQ------- 430
G AG+P G P LP H E P + + P M
Sbjct: 278 VGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGP 337
Query: 431 --------HPPPQQAPNQRLQHF--DAPPYMNVAKRPRFD-FPGSAGVDRCASWNGSMHN 479
PQ AP QR H P M P FPG+ G+ A G+
Sbjct: 338 RGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGP 397
Query: 480 GALDNHLS------PSAYPGLPGEF----TP----PVPDSFPSGPPLQHPAPDHQSLQQQ 525
P PGLPG TP P SGPP P Q
Sbjct: 398 EGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGS 457
Query: 526 QQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVG 585
Q + Q + + + + I+ ++ R P G PG VG
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPR----GDPGTVG 513
Query: 586 QGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDL-L 643
G PVG P GS G G G ++ P + G PG+ L
Sbjct: 514 PPG-----PVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGL 568
Query: 644 PRRMGGSGLPADCGPHD---PSLAP-----PPPPGGSGVLFRGPLQEPMRMPGEGHVPAL 695
P G +G P GP P AP P PPG G+ RG M +PG
Sbjct: 569 PGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGI--RGQ-PGSMGLPGPKGSSGD 625
Query: 696 PS-PGLQFGGSLGGLGQLQSPGAG--------VGLPSAASER--RPPPPDFATSALGGQP 744
P PG G+ G GQ +PG VG P A ER + PP L G P
Sbjct: 626 PGKPGE--AGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPP 683
Query: 745 GFPF--GAAGRQSTP--------------HSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQ 788
G P G G Q P PG P G G G GG G P
Sbjct: 684 GPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHG--PDG 741
Query: 789 PDFQPSQRTSASKLGALSL-------GSFNKPSSKDNLFGQSCLAALSTA----CQNMIA 837
P P + G L G P K + G A TA + +
Sbjct: 742 PKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPG 801
Query: 838 SLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTS 897
LG P +K P G R L GNPGS G T GA G GP G
Sbjct: 802 PLGPPGPAGPTGEKGEP-GPRGL----VGPPGSRGNPGSRGENGPT--GAVGFAGPQGPD 854
Query: 898 SSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGT 957
P P +GD S P S + V G G GRG + PG+
Sbjct: 855 GQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKG-GRGTQGPPGATGFPGS 913
Query: 958 FFDKYSAAPDSGGAPGVS-----PGQQQASG--------AAVGGSSAGETRGAP----TP 1000
P GAPG + PG++ G VG G P P
Sbjct: 914 A--GRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDP 971
Query: 1001 HEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASD--EVSTSYANEDE 1058
E P G G Q ++G G + + P + A +V + A D+
Sbjct: 972 GEDGQPGPDGPPGPAGTTG-QRGIVGM--PGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1028
Query: 1059 -----VSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTS 1113
V N P G+ P R GE G + P GL +
Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGP--AGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPG 1086
Query: 1114 TPDSYGGGGGPGHPGTPGLEQVRTPTSSSG 1143
TP G G G G PG P +G
Sbjct: 1087 TPGPVGAPGDAGQRGDPGSRGPIGPPGRAG 1116
Score = 80.5 bits (197), Expect = 1e-14
Identities = 157/646 (24%), Positives = 199/646 (30%), Gaps = 122/646 (18%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA----GRLGTFEQQAPHLAQESAWFSG 634
G PG G G GP G + G G G G + PH Q G
Sbjct: 441 GPPGSAGPPG--SPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQ------G 492
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDP--------------SLAPPPPPGGSGVLFRGPL 680
P PPG+ + G G P GP P S P P G G RGP+
Sbjct: 493 PIGPPGE--EGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGE--RGPV 548
Query: 681 QEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVG-LPSAASERRPPPPDFATSA 739
+G PGL L G +Q P +G L + + RP PP +
Sbjct: 549 GSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPP--GSIG 606
Query: 740 LGGQPGF-----PFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPS 794
+ GQPG P G++G P P G G G G PP +
Sbjct: 607 IRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERG 666
Query: 795 QRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPP 854
++ G L P + G + A + LG P
Sbjct: 667 EQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGA----VGPLG-------------P 709
Query: 855 EGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAP-GPGGPSGTSSSGSKASGPPN----- 908
G+R + E + G PG GG P P G GPSGT +GPP
Sbjct: 710 RGERG-NPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGD----TGPPGLQGMP 764
Query: 909 --------PPAQGDGTSLSPNYTLESTSGNDGK--------PVSGGGGRGRGRRKRDSGH 952
P +GD + E T+GNDG P G G G
Sbjct: 765 GERGIAGTPGPKGDRGGIGEKGA-EGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGL 823
Query: 953 VSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAP----TPHEKALTSP 1008
V P P S G PG S G+ +GA VG + G P P E
Sbjct: 824 VGP----------PGSRGNPG-SRGENGPTGA-VGFAGPQGPDGQPGVKGEPGEPGQKGD 871
Query: 1009 SWGKGAELLLGDQ----PDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSS- 1063
+ G + L G P+ + L GG + P F +
Sbjct: 872 AGSPGPQGLAGSPGPHGPNGVPGLKGG-RGTQGPPGATGFPGSAGRVGPPGPAGAPGPAG 930
Query: 1064 -------DNPQALV--KASRSPLVTGSPKLPPRGVGA-------GEHGPKAPPPALGLGI 1107
+ P L S + P PP G G G+ GP PP G
Sbjct: 931 PLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTG 990
Query: 1108 MSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSG-APPPDEIHP 1152
P G G PG PG G PT ++G PP + P
Sbjct: 991 QRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGP 1036
Score = 75.5 bits (184), Expect = 3e-13
Identities = 162/672 (24%), Positives = 213/672 (31%), Gaps = 147/672 (21%)
Query: 577 QLGHPGDVGQGGLVHG-----GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESA 630
+LG G GQ G HG GP+G L P G+ G G G + P Q
Sbjct: 346 RLGPQGAPGQRG-AHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQR 404
Query: 631 WFSGPHPPPGDL-LPRRMGGSGLPADCGPH-DPSLAPPP----PPGGSGVLFRGPLQEPM 684
+GP P G LP +G G P GP P + PP PPG G Q
Sbjct: 405 GETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIR 464
Query: 685 RMPGEGHVPALPSPGLQFGGSLGGLGQ-----LQSPGAGVGLPSAASERRP--------P 731
PG+ VP F G G G+ +Q P +G P +R P P
Sbjct: 465 GQPGDPGVPG-------FKGEAGPKGEPGPHGIQGP---IGPPGEEGKRGPRGDPGTVGP 514
Query: 732 PPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF 791
P G GFP G+ G P G P + G GS G G G P P
Sbjct: 515 PGPVGERGAPGNRGFP-GSDGLPG-PKGAQGERGPVGSSGPKGSQGDPGRPGE-PGLPGA 571
Query: 792 Q-----PSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLN 845
+ P + KLG L G +P ++ + S+G P
Sbjct: 572 RGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSI-----------GIRGQPGSMGLPGPK 620
Query: 846 VTFNKKNPPEGKRKLSQNETDGAAVAGN---PGSDYFPGGTAPGAP----------GPGG 892
+ P E A V G PG D G + P P GP G
Sbjct: 621 GSSGDPGKP--------GEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPG 672
Query: 893 PSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGH 952
P+G GPP PP +G G G P + G RG R
Sbjct: 673 PTGFQG----LPGPPGPPGEGGKPG---------DQGVPGDPGAVGPLGPRGERGNPGER 719
Query: 953 VSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAP----TPHEKALTSP 1008
PG + P G G G G+ + G+T G P P E+ +
Sbjct: 720 GEPGI-----TGLPGEKGMAG-GHGPDGPKGSPGPSGTPGDT-GPPGLQGMPGERGIAGT 772
Query: 1009 SWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
KG +G++ +G A +D + G + + E P+
Sbjct: 773 PGPKGDRGGIGEK-----GAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE-----PGPRG 822
Query: 1069 LVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPG 1128
LV S G+P G G P A+G P G G PG G
Sbjct: 823 LVGPPGS---RGNP---------GSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKG 870
Query: 1129 TPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVG 1188
G P +G+P P + + GLKGG+ + G
Sbjct: 871 DAGSP---GPQGLAGSPGPHGPNGVP---------------------GLKGGRGTQGPPG 906
Query: 1189 ASGAQNGDSELG 1200
A+G +G
Sbjct: 907 ATGFPGSAGRVG 918
Score = 61.2 bits (147), Expect = 6e-09
Identities = 145/566 (25%), Positives = 178/566 (31%), Gaps = 144/566 (25%)
Query: 607 GGSTGAGRLGTFEQQAPHLAQESAWFSG---PHPPPGDLLPR-RMGGSGLPADCGPHDPS 662
GG+T GR ++ P L G P PPG PR G G P GP
Sbjct: 102 GGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGID 161
Query: 663 LAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSP-GLQ--FGGSLGGLGQLQSPGAGV 719
P PG G PG P+ P P GL F + GL + G+ V
Sbjct: 162 -GEPGVPGQPGA------------PGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQV 208
Query: 720 GL-PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGG 778
GL P + P P L GQ G G G PP G G G
Sbjct: 209 GLMPGSVGPVGPRGPQ----GLQGQQG--------------GAGPTGPPGEPGDPGPMGP 250
Query: 779 GGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIAS 838
G G P P +P G +P N G+ A S + +
Sbjct: 251 IGSRG--PEGPPGKP--------------GEDGEPGRNGNP-GEVGFAG-SPGARGFPGA 292
Query: 839 LGAPNLNVTFNKKN--PPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSG 895
G P L K P+G+ G PGS G T P GA GP GP G
Sbjct: 293 PGLPGLKGHRGHKGLEGPKGE-------------VGAPGSKGEAGPTGPMGAMGPLGPRG 339
Query: 896 TSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSP 955
+ GP P Q G GKP G + P
Sbjct: 340 MPGERGRL-GPQGAPGQ------------RGAHGMPGKP----------------GPMGP 370
Query: 956 GTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPH-EKALTSPSWGKGA 1014
P S G PG +PG + +G RG P ++ T P G+
Sbjct: 371 -------LGIPGSSGFPG-NPGMKGEAGPT-------GARGPEGPQGQRGETGPPGPVGS 415
Query: 1015 ELLLGDQPDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKA 1072
L P IG+ DG GAK + SP S ++ S PQ +
Sbjct: 416 PGL----PGAIGT-DGTPGAKGPTGSPGT----SGPPGSAGPPGSPGPQGSTGPQGIRGQ 466
Query: 1073 SRSPLVTG-----SPKLPPRGVGA----------GEHGPKAPPPALGLGIMSNSTSTPDS 1117
P V G PK P G G+ GP+ P +G P +
Sbjct: 467 PGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGN 526
Query: 1118 YGGGGGPGHPGTPGLEQVRTPTSSSG 1143
G G G PG G + R P SSG
Sbjct: 527 RGFPGSDGLPGPKGAQGERGPVGSSG 552
Score = 50.1 bits (118), Expect = 1e-05
Identities = 76/236 (32%), Positives = 90/236 (38%), Gaps = 47/236 (19%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHP 637
G PG VG G GPVG +P E G+ G GR G ++ A G
Sbjct: 1029 GPPGPVGPPG--SNGPVG---EPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQG 1083
Query: 638 PPGDLLPRRMGGSGLPADCGPH-DP-SLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPAL 695
PG G G P D G DP S P PPG +G RG +PG P
Sbjct: 1084 APGT-----PGPVGAPGDAGQRGDPGSRGPIGPPGRAGK--RG-------LPG----PQG 1125
Query: 696 PSPGLQFGGSLGGLGQLQSPG-AGV-GLPSAASERRPPPPDFATSALG--------GQPG 745
P G G GQ G G+ GLP PP P+ + G G PG
Sbjct: 1126 PRGDKGDHGDRGDRGQKGHRGFTGLQGLPG------PPGPNGEQGSAGIPGPFGPRGPPG 1179
Query: 746 FPFGAAGRQSTPHSGP-GVNSPPSAGGGGGSSG-GGGGGGAYPPQPDFQPSQRTSA 799
P G +G++ P GP G PP G G +G G G PP P P T+A
Sbjct: 1180 -PVGPSGKEGNP--GPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAA 1232
Score = 43.1 bits (100), Expect = 0.002
Identities = 38/132 (28%), Positives = 51/132 (38%), Gaps = 11/132 (8%)
Query: 1076 PLVTG-----SPKLPPRGVGA-GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGT 1129
P+VTG P PP G GE GPK P G + P G G PGHP
Sbjct: 122 PVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSH 181
Query: 1130 PGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFS-ISEDQPLGLKGGKKGECAVG 1188
PG + + P S+ A ++ L +Q+ L + P GL+G + G G
Sbjct: 182 PGPDGLSRPFSAQMAGLDEK----SGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTG 237
Query: 1189 ASGAQNGDSELG 1200
G +G
Sbjct: 238 PPGEPGDPGPMG 249
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 93.2 bits (230), Expect = 1e-18
Identities = 294/1198 (24%), Positives = 372/1198 (31%), Gaps = 216/1198 (18%)
Query: 42 GGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGH 101
GGP GP GEP ++G +P +G+ + G P G+ G
Sbjct: 204 GGPAGPTGYP----GEPGLVGPPGQPGRPGLKGNPGVGVKGQMGDP------GEVGQQGS 253
Query: 102 PGSH---HPHQHHPHFG--------GNFGGPDP-------GASCLHGGRLLGYGGAAGGL 143
PG P + G G G P P G + G+ G G
Sbjct: 254 PGPTLLVEPPDFCLYKGEKGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDP 313
Query: 144 GS--QPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAA 201
GS P F + P FG P P + P LPL P
Sbjct: 314 GSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPLPLKGPPGDP- 372
Query: 202 SFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA 261
G P G P G PGEA +G P G LP
Sbjct: 373 ---GFPGRYGETGDVGPPGPPGLLGR--------PGEACAGMIGPPGPQGFPG-LPGLPG 420
Query: 262 GRQVPG--GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSG 319
+PG + PG P + G+ G + P G S
Sbjct: 421 EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLP------------------GSSVIYCSV 462
Query: 320 ARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQ----QPPQQQPPPPPGLLVRQNSCP 375
P G++ VG PP P ++ +P PP PPGL RQ S
Sbjct: 463 GNPGPQGIKGKVG-------PPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKG 515
Query: 376 PALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQ 435
G G P +G P LP +H P ++ M V ++ +
Sbjct: 516 DLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDM-----VVSRVKGHKGE 570
Query: 436 QAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLP 495
+ P D PP PGS G D A G +P G P
Sbjct: 571 RGP-------DGPPGFPGQ-------PGSHGRDGHAGEKGDPGPPGDHEDATPGG-KGFP 615
Query: 496 GEFTPPVPDSFPSGPP-LQHPAPD----HQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 550
G PP + P GPP L P P H + + + Q+
Sbjct: 616 GPLGPP-GKAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPG 674
Query: 551 RQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGST 610
R + P L+ G G G+ G + G P F + G
Sbjct: 675 RHGPPGFDGPPGPKGFPGPQGAPGLS--GSDGHKGRPGTPGTAEIPG--PPGFRGDMGDP 730
Query: 611 GAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPG 670
G G ++ + GP PPG P G G+P D P L PP G
Sbjct: 731 GFG------------GEKGSSPVGPPGPPGS--PGVNGQKGIPGD--PAFGHLGPPGKRG 774
Query: 671 GSGVL-FRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERR 729
SGV +GP +P EG PA L G G G PG G P + ER
Sbjct: 775 LSGVPGIKGPRGDPGCPGAEG--PAGIPGFLGLKGPKGREGHAGFPGVP-GPPGHSCERG 831
Query: 730 PPPPDFATSALGGQPGFPFGAAGRQSTP--HSGPGVNSPPSAGGGGGSSGGGGGGGAYPP 787
P + GQPG P G G P PG PP G G G G GA+ P
Sbjct: 832 AP-------GIPGQPGLP-GYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGP 883
Query: 788 Q----------PDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIA 837
D P G F P + + C A + ++
Sbjct: 884 PGLPGIPGPFGDDGLPGPPGPKGPRGLPGFPGF--PGERGKPGAEGCPGAKGEPGEKGMS 941
Query: 838 SL-GAPNLNVTFNKKNPP--EGKRKL-SQNETDGAAVAGNPGSDYFPG-----GTAP--- 885
L G L PP EG+ + SQ T G G PG D FPG GT
Sbjct: 942 GLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEP--GPPGDDGFPGERGDKGTPGMQG 999
Query: 886 --GAPGPGGPSG--TSSSGSKAS-GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG-- 938
G PG GP G G K GPP PP T L G+ G+P S G
Sbjct: 1000 RRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPP 1059
Query: 939 ------GGRG-RGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS--PGQQQASGAAVGGS 989
G RG +G + + H P P G PG PG ASG G
Sbjct: 1060 GFSGIDGARGPKGNKGDPASHFGP----------PGPKGEPGSPGCPGHFGASGEQ-GLP 1108
Query: 990 SAGETRGAP-TPHEKALTSPSWGKGAELLLG--DQPDLIGS-----LDG--------GAK 1033
RG+P P + P G + G QP +G L G G K
Sbjct: 1109 GIQGPRGSPGRPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIK 1168
Query: 1034 SDSSSPNVGEF---ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVG 1090
S SP + + + + +V +K R GSP + P G
Sbjct: 1169 GPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGD--PGSPGISPPGP- 1225
Query: 1091 AGEHGPKAPPPALGLGIMSNSTS-TPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPP 1147
G+ GP PP + G + +T P G PG G PG P GAP P
Sbjct: 1226 RGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPG------PDGPRGAPGP 1277
Score = 80.1 bits (196), Expect = 1e-14
Identities = 290/1213 (23%), Positives = 380/1213 (31%), Gaps = 198/1213 (16%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP--VHGFFGGQQPHHG 100
GPPGP P + LG P +G++ E RG P V GF G G
Sbjct: 68 GPPGPQGP-IGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGF-PGLDGIPG 125
Query: 101 HPGSHHPHQHHPHFGGNFGGPDPGASCLHGGR-LLGYGGAAGGLGSQPPFAEGYEHMAES 159
HPG P G N DPG GGR LG GG G G + +
Sbjct: 126 HPGPPGPRGKPGMSGHNGSRGDPG---FPGGRGALGPGGPLGHPGEKGEKGNSVFILGAV 182
Query: 160 QGPESFGPQRPGNLPDFHSS-GASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE 218
+G + G + LP S GA A P + G P G
Sbjct: 183 KGIQ--GDRGDPGLPGLPGSWGAGGPAGPT-------------GYPGEPGLVGPPGQPGR 227
Query: 219 PRRVTNQGAVDSLEYNYPGEAPS----GHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGAS 274
P N G + PGE G + P D Y + + G PG
Sbjct: 228 PGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPD----FCLYKGEKGIKG--IPGMV 281
Query: 275 AMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP--------VG 326
+P G G S + A+ + P F G + +G
Sbjct: 282 GLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIG 341
Query: 327 LEPSVGSR-HPLMQPPQQAPPPPQQQPPQQPP---------QQQPPPPPGLLVRQNSCPP 376
+ G+R HP PP P + PP P PP PPGLL R
Sbjct: 342 PKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACA 401
Query: 377 AL---PRPQ--------QGEAGTPSGGLQDGGPMLPSQHAQFEYP----IHRLENRSM-- 419
+ P PQ GEAG P G D P P + P + L S+
Sbjct: 402 GMIGPPGPQGFPGLPGLPGEAGIP--GRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIY 459
Query: 420 ----HPYSEPVFSMQHPPPQQAP-----NQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRC 470
+P + + PP + P N+ L + P G G
Sbjct: 460 CSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPM------------GPPGPPGL 507
Query: 471 ASWNGSMHNGALDNHLSPSAYPGLPGEFTPP-VPDSF-PSGPPLQHPAPDHQSLQQQQQQ 528
GS + L L PG PG PP +P SGPP A + + +
Sbjct: 508 PGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGH 567
Query: 529 QQQQQQQQQ-----QQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGD 583
+ ++ Q + ++ + + + P L G G
Sbjct: 568 KGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGP-LGPPGKAGP 626
Query: 584 VGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPG--- 640
VG GL GP G P G G L + Q + + G H PPG
Sbjct: 627 VGPPGLGFPGPPGERGHPGVPGHPGVRGPDGL---KGQKGDTISCNVTYPGRHGPPGFDG 683
Query: 641 ----DLLPRRMGGSGLPADCG----PHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHV 692
P G GL G P P A P P G FRG + +P +G
Sbjct: 684 PPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPG----FRGDMGDPGFGGEKGSS 739
Query: 693 PALP-----SPGLQFGGSLGG---LGQLQSPGAG--VGLPSAASERRPPPPDFATSALGG 742
P P SPG+ + G G L PG G+P R P A G
Sbjct: 740 PVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGP-AG 798
Query: 743 QPGFPF--GAAGRQSTPHSG-PGVNSPPSAGGGGGSSGGGGGGG--AYPPQPDFQPSQRT 797
PGF G GR+ H+G PGV PP G+ G G G YP P P +
Sbjct: 799 IPGFLGLKGPKGREG--HAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPG-APGGKG 855
Query: 798 SASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKN----- 852
+G P + G L A G P + F
Sbjct: 856 QPGDVG---------PPGPAGMKGLPGLPGRPGAH----GPPGLPGIPGPFGDDGLPGPP 902
Query: 853 PPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSS----GSK-ASGPP 907
P+G R L G PG++ PG A G PG G SG G+K A GPP
Sbjct: 903 GPKGPRGLP-GFPGFPGERGKPGAEGCPG--AKGEPGEKGMSGLPGDRGLRGAKGAIGPP 959
Query: 908 NPPAQGDGTSLSPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKYSAA 965
+ S G+DG P G G G R+ + G P F
Sbjct: 960 GDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGE 1019
Query: 966 PDSGGAPGVSPGQQQASGAA--VGGSSAGETRGAP-TPHEKALTSPSWGKGAELLLGDQP 1022
G PG PG ++G +G +G P +P + +G + GD
Sbjct: 1020 KGQPGPPG-PPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPA 1078
Query: 1023 DLIGSLDGGAKSDSSSPNV-GEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGS 1081
G G K + SP G F + Q L P + G
Sbjct: 1079 SHFGP--PGPKGEPGSPGCPGHFGAS-----------------GEQGL------PGIQGP 1113
Query: 1082 PKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSS 1141
P R G GP P G+ + G G G PG PG ++ P
Sbjct: 1114 RGSPGRPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGP--- 1170
Query: 1142 SGAPPPDEIHPLE 1154
SG+P + +H L+
Sbjct: 1171 SGSPGLNGLHGLK 1183
Score = 71.6 bits (174), Expect = 5e-12
Identities = 294/1222 (24%), Positives = 377/1222 (30%), Gaps = 278/1222 (22%)
Query: 43 GPPGPVD-PAMSAL-GEPPILGMNMEPYGFHARGHSELHAG--GLQAQP----VHGFFGG 94
GPPGP P + L GE I G G + S G GLQ P ++ G
Sbjct: 405 GPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGN 464
Query: 95 QQPHH-----GHPGSHHPHQHHPHFG------GNFGGPDP-GASCLHGGRLLGYGGAAGG 142
P G PG P + G G G P P G G + G G G
Sbjct: 465 PGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSK--GDLGLPGW 522
Query: 143 LGSQ----PPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPN 198
LG++ PP AEG + G S P G D S H ++ P+
Sbjct: 523 LGTKGDPGPPGAEGPPGLPGKHGA-SGPPGNKGAKGDMVVSRVKGHKG-------ERGPD 574
Query: 199 RAASFHGLPSSSGSDSHSLEPRRVT-----------------------NQGAVDSLEYNY 235
F G P S G D H+ E G V +
Sbjct: 575 GPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGF 634
Query: 236 PGEAPS-------GHFDMFSPSDSEGQLPHYAA------GRQVPGG--AFPGASAMPRAA 280
PG GH + P +GQ + GR P G PG P
Sbjct: 635 PGPPGERGHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGPQ 694
Query: 281 GMVGLSKMHAQPPQQ-QPQQQQQPQQQQQQHGVFFERFSGAR-KMPVGL-----EPSVGS 333
G GLS + P + P + + F G + PVG P V
Sbjct: 695 GAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVGPPGPPGSPGVNG 754
Query: 334 RHPLMQPPQ--QAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSG 391
+ + P PP ++ P + P PG CP A +G AG P G
Sbjct: 755 QKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPG-------CPGA-----EGPAGIP-G 801
Query: 392 GLQDGGPMLPSQHAQFEY----PIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDA 447
L GP HA F P H E + +P +P AP + Q D
Sbjct: 802 FLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLP-GYPGSPGAPGGKGQPGDV 860
Query: 448 PPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPP-VPDSF 506
P PG AG+ G GA P PG+PG F +P
Sbjct: 861 GP------------PGPAGMKGLPGLPG--RPGAH----GPPGLPGIPGPFGDDGLPG-- 900
Query: 507 PSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQ 566
P GP P ++ + + + + + K M+
Sbjct: 901 PPGPKGPRGLPGFPGFPGERGKPGAEGCPGAKGEPGE---------------KGMSGLPG 945
Query: 567 QQRLRQPNLAQLGHPGDVGQGGLV-------HGGPVGGLAQPNFEREGGSTGA-GRLGTF 618
+ LR A +G PGD G+ ++ GP G P + G+ G GR G
Sbjct: 946 DRGLRGAKGA-IGPPGDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQGRRGE- 1003
Query: 619 EQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG 678
G + PPG G P + G P PP PPG +G+ RG
Sbjct: 1004 --------------PGRYGPPGF-------HRGEPGEKGQPGPP-GPPGPPGSTGL--RG 1039
Query: 679 PLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATS 738
+ P +PG+ P P P G+ + P G P AS PP P
Sbjct: 1040 FIGFP-GLPGDQGEPGSPGPP-----GFSGIDGARGPKGNKGDP--ASHFGPPGPK---- 1087
Query: 739 ALGGQPGFP-----FGAAGRQSTP-----HSGPGVNSPPSAGGGGGSSGGGGGGGAY-PP 787
G+PG P FGA+G Q P PG PP + G G G G G P
Sbjct: 1088 ---GEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSSGPPGCPGDHGMPGLRGQP 1144
Query: 788 QPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALS-TACQNMIASLGAPNLNV 846
P R G PS L G L T + + +G P
Sbjct: 1145 GEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPG--- 1201
Query: 847 TFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGP 906
P K + + G + G G PG PG+ GP GP+G + K
Sbjct: 1202 ---PVGIPGLKGERGDPGSPGISPPGPRGKKGPPG--PPGSSGPPGPAGATGRAPKDIPD 1256
Query: 907 PNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAP 966
P PP GD P + G G P G D G P P
Sbjct: 1257 PGPP--GDQGPPGP----DGPRGAPGPPGLPGSVDLLRGEPGDCGLPGP-------PGPP 1303
Query: 967 DSGGAPGVS--PGQQQASG--AAVGGSSAGETRGAP-TPHEKALTSPSWGKGAELLLGDQ 1021
G PG PG G VG G P P EK L P KG L
Sbjct: 1304 GPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGL---- 1359
Query: 1022 PDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGS 1081
G + + P A+ D+ R P + G+
Sbjct: 1360 --------PGPRGEPGPP--------------ADVDD-------------CPRIPGLPGA 1384
Query: 1082 PKL--PPRGVG-AGEHGPKAP----PPAL----GLGIMSNSTSTPDSYGGGGGPGHPGTP 1130
P + P +G G GP P P L G+ + S P G G G+PG P
Sbjct: 1385 PGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGP 1444
Query: 1131 GLEQVRTPTSSSGAPPPDEIHP 1152
G P G P P P
Sbjct: 1445 G------PPGPIGDPGPKGFGP 1460
Score = 55.8 bits (133), Expect = 3e-07
Identities = 127/516 (24%), Positives = 157/516 (30%), Gaps = 160/516 (31%)
Query: 656 CGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSP 715
C P S PP PPG G + GPL P G +G G+
Sbjct: 57 CVPEKGSRGPPGPPGPQGPI--GPLGAP--------------------GPIGLSGEKGMR 94
Query: 716 GAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGS 775
G G P AA ++ P G PGFP G G PG PP G G
Sbjct: 95 G-DRGPPGAAGDKGDKGPT-------GVPGFP-GLDGI-------PGHPGPPGPRGKPGM 138
Query: 776 SGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGS-FNKPSSKDNLFGQSCLAALSTACQN 834
SG G G P F P R GAL G P K N
Sbjct: 139 SGHNGSRG----DPGF-PGGR------GALGPGGPLGHPGEKGEK-------------GN 174
Query: 835 MIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPS 894
+ LGA + G+ G PG PG+ G GGP+
Sbjct: 175 SVFILGAVK-------------------------GIQGDRGDPGLPG--LPGSWGAGGPA 207
Query: 895 GTSSSGSKAS--GPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGH 952
G + + GPP P + G +P ++ G+ G+ V G G +
Sbjct: 208 GPTGYPGEPGLVGPPGQPGR-PGLKGNPGVGVKGQMGDPGE-VGQQGSPG------PTLL 259
Query: 953 VSPGTFFDKYSAAPDSGGAPGV-----SPGQQQASGAAVGGSSAGETRGAPTPHEKALTS 1007
V P F Y G PG+ PG++ SG G P + S
Sbjct: 260 VEPPDFC-LYKGEKGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGS 318
Query: 1008 PSW-GKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNP 1066
P + G EL L P L G + G K D + P
Sbjct: 319 PGFPGLKGELGLVGDPGLFGLI--GPKGDPG----------------------NRGHPGP 354
Query: 1067 QALVKASRSPL--VTGSPKLPPRGVGAGEHGPKAPPPALG-------------------- 1104
++ PL G P P R G+ GP PP LG
Sbjct: 355 PGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPG 414
Query: 1105 -------LGIMSNSTSTPDSYGGGGGPGHPGTPGLE 1133
GI S P G G PG PG PGL+
Sbjct: 415 LPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQ 450
Score = 33.9 bits (76), Expect = 1.1
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 1092 GEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIH 1151
G+ G P + G G + T P G G PG PG PGL+ P E+
Sbjct: 190 GDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGLKGNPGVGVKGQMGDPGEVG 249
Query: 1152 PLEILQAQIQLQRQQFSISEDQPLGLKG-----------GKKGECAVGASG 1191
+ ++ F + + + G+KG G+KGE +GA G
Sbjct: 250 QQGSPGPTLLVEPPDFCLYKGEK-GIKGIPGMVGLPGPPGRKGESGIGAKG 299
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 93.2 bits (230), Expect = 1e-18
Identities = 130/486 (26%), Positives = 165/486 (33%), Gaps = 84/486 (17%)
Query: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573
H H +LQQQ Q QQQQQQQQQQQQQQQQQQ N +L
Sbjct: 40 HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
Query: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629
GG GG QP + E GG+ + G + P L +
Sbjct: 83 ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
Query: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689
P G+ R GL A G P P PGG G GP P
Sbjct: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
Query: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747
G PA PG + G G QSPG G + SAA+ P D ++ G P
Sbjct: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
Query: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
S P +G G GGGGGS GGGGGGGA +A+ A
Sbjct: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Query: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867
G +G L +P P G G
Sbjct: 295 GGGGGYGGSSAGYG----------------VLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 868 AAVAG---NPGSDYFPGGTAP------GAPGPGGPS--GTSSSGSKASGPPNPPAQGDGT 916
+A G G + P G P +P P S G+ S S PP PP+Q
Sbjct: 339 SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
Query: 917 SLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSP 976
+ + + + G+ + G G G+ + + + S S G PG +
Sbjct: 399 AAA------AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
Query: 977 GQQQAS 982
G+ Q S
Sbjct: 453 GRSQGS 458
Score = 81.6 bits (200), Expect = 4e-15
Identities = 230/994 (23%), Positives = 308/994 (30%), Gaps = 251/994 (25%)
Query: 44 PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88
PPGP P +S G+ PP +G EP G H L A G Q PV
Sbjct: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
Query: 89 ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144
+ ++G P G PG + P F + G PG +H AAG G
Sbjct: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
Query: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204
S P +E SQ G RPG G +
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
Query: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264
G + G+ + ++ A G + +G+ + SP RQ
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
Query: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
GG G P G LSK A F+RF+G + P
Sbjct: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
Query: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384
G P++ L+ P P + P P PP PP+ P+ Q
Sbjct: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
Query: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444
AG +GG Q M + +Y + S P S P P +Q
Sbjct: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
Query: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501
+P V KRP+ GS + H P S YPG G + PP
Sbjct: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
Query: 502 VPDSFPSGPPLQHPA-------PDHQS-------------------------LQQQQQQQ 529
P +P G + P P Q QQ QQ
Sbjct: 496 GPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPY 555
Query: 530 QQQQQQ-------------QQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLA 576
QQ Q Q QQ+ Q QQ Q+ + + L NL
Sbjct: 556 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL---NLI 612
Query: 577 QLGHPGDVGQ-GGLVHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS- 633
Q P + G + P G A + GST + + Q+P S S
Sbjct: 613 QQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 672
Query: 634 ---GPHPPP-GDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QE 682
GP P P G + SG P S PP PPG L + P+ QE
Sbjct: 673 IPGGPSPSPVGSPVGSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQE 731
Query: 683 PMRMPGEGHVPAL---------------PSPGLQFGGSL-------------------GG 708
M G P + PSPG Q + G
Sbjct: 732 RGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGP 791
Query: 709 LGQLQSPGAGVGLPSAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQST 756
G P A G+PSA+ P P SA + GQ P P GA AG Q+
Sbjct: 792 QGNYSRPPAYSGVPSASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
Query: 757 PHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSS 815
P G + PS+ G G G G PP P + +Q +A+ + A + + ++ S
Sbjct: 850 PFPGNMSSMTPSSPGMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
Query: 816 KDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAG 872
+ +A+ S Q M N + N + PP N + G A
Sbjct: 906 FPGMNQSGLMASSSPYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMM 959
Query: 873 NPGSDYFP-----GGTAPGAPGPGGPSGTSSSGS 901
+PG P G G P P S SSS +
Sbjct: 960 SPGESKLPLPLKADGKEEGTPQPESKSKKSSSST 993
Score = 78.6 bits (192), Expect = 4e-14
Identities = 174/807 (21%), Positives = 261/807 (32%), Gaps = 123/807 (15%)
Query: 31 NTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHG 90
N ++ + A +GGP G P G GM M +H+ A G
Sbjct: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM------------MHSASAAAAGAPG 220
Query: 91 FFGG-QQPHHGHPGS---HHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAG-GLGS 145
Q H G+P S H+P P GG GG G GG G GA G G G+
Sbjct: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
Query: 146 QPPFAEGYEHMAESQGPESFGPQRPG----NLPDFHSSGASSHAVPAPCLPLDQSPNRAA 201
A A G +G G + P G L ++ +A
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 202 SFHGLPSSSGSDSHSLEPRRVTNQ--GAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHY 259
+ G +G + H NQ + + +Y G P + +P Q
Sbjct: 341 A-GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPE-YSSPSAPPPPPSQPQSQ 398
Query: 260 AAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSG 319
AA G A+ M M G A P QQ+ P G R G
Sbjct: 399 AAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQG 457
Query: 320 ARKMPVGLEP----SVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCP 375
+ P+ ++ +GS +P QP Q +P P P P + P G+ R
Sbjct: 458 SPMDPMVMKRPQLYGMGS-NPHSQPQQSSPYPGGSYGPPGPQRY----PIGIQGRTPGAM 512
Query: 376 PALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPP- 434
+ PQQ ++G + ++ ++P Q+ Q + + PY H PP
Sbjct: 513 AGMQYPQQQDSGDAT--WKETFWLMPPQYGQ--QGVSGYCQQGQQPYYSQQPQPPHLPPQ 568
Query: 435 -QQAPNQRLQHF--------------DAPPY---------MNVAKRPR-----------F 459
Q P+Q Q + PP +N+ ++ R
Sbjct: 569 AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSID 628
Query: 460 DFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGP---PLQHPA 516
D P ++ + S + + +P+ P P P S P GP P+ P
Sbjct: 629 DLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSP--HASPHLSSIPGGPSPSPVGSPV 686
Query: 517 PDHQ---------SLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQ 567
+Q S+ Q Q Q + Q ++ + Q + Q
Sbjct: 687 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 746
Query: 568 QRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGG--STGAGRLGTFEQQAPHL 625
+Q + HP GG +H G + Q N G + G G + + +
Sbjct: 747 YGPQQTGPSMSPHP---SPGGQMHAG-ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYS 802
Query: 626 AQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMR 685
SA +SGP P G +M G G P P G+ L R P
Sbjct: 803 GVPSASYSGPGPGMGISANNQMHGQG--------------PSQPCGAVPLGRMPSAGMQN 848
Query: 686 MPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPS-------AASERRPPPPDFATS 738
P G++ ++ S G+ Q PG G +P+ AA+ + A S
Sbjct: 849 RPFPGNMSSMTP-------SSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS 901
Query: 739 ALGGQPGFPFGAAGRQSTPHSGPGVNS 765
G PG S+P+S P NS
Sbjct: 902 RQGSFPGMNQSGLMASSSPYSQPMNNS 928
Score = 66.6 bits (161), Expect = 1e-10
Identities = 119/475 (25%), Positives = 168/475 (35%), Gaps = 65/475 (13%)
Query: 703 GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754
GG+ GG Q ++ P G SAA + PP S G + P A GR
Sbjct: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
Query: 755 STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
P G G PP A GGGGG A P ++ S ++ G + F++
Sbjct: 143 EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
Query: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
+ + G + + S A + GAP G QN +G N
Sbjct: 198 GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
Query: 874 PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933
+++PG + PGA G GG G GS G G G + + + +
Sbjct: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
Query: 934 PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990
GGGG G G G +S P P GGA +S + A+G+A GG
Sbjct: 291 AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
Query: 991 AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044
AG+ + GA + LTSPS G P +S +++
Sbjct: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
Query: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099
+ +D + + A A + SP P +G + P P
Sbjct: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
Query: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDE 1149
P G+G SN S P Y GG G PG P Q RTP + +G P +
Sbjct: 468 PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
Score = 56.2 bits (134), Expect = 2e-07
Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)
Query: 95 QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147
Q P + GS Q G N PG AS HG GG + +
Sbjct: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1180
Query: 148 PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205
PF++ +++S P+ S P P + G S +P + PN+ F G
Sbjct: 1181 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1226
Query: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261
+ GS + ++ N D YN ++PSG + Q P+ A+
Sbjct: 1227 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1280
Query: 262 ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303
G+Q PG P + P GL K H PP ++ + Q
Sbjct: 1281 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1339
Query: 304 QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359
QQQ+ + + +SG + P+ G P SR + P Q PP P Q
Sbjct: 1340 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1399
Query: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417
+ P R + +P P Q G P G Q P P + + P R+ +
Sbjct: 1400 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1451
Query: 418 SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477
S P + P + + +Q PP +P + P S + + +
Sbjct: 1452 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1500
Query: 478 HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515
+L+N +SPS P LP + P VP S +GPP Q P
Sbjct: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
Score = 52.8 bits (125), Expect = 2e-06
Identities = 207/923 (22%), Positives = 264/923 (28%), Gaps = 200/923 (21%)
Query: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394
H L Q Q QQQ QQ QQQ P + NS G GG
Sbjct: 46 HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
Query: 395 DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454
GP E P H S PP ++ DAPP M
Sbjct: 91 QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
Query: 455 KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512
R++ PG GAL P A PG G P + + S P
Sbjct: 138 AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
Query: 513 QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
P ++ Q QQ L N Q
Sbjct: 183 SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
Query: 573 PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630
P ++ G G G GG GG GG GG GAG G A A +A
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
Query: 631 -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
+ G G L R G G+ P G S A G F G Q
Sbjct: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
Query: 683 PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717
P P + PSP ++ +GGS G Q A
Sbjct: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
Query: 718 GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753
G+GL AA+++R P P +G G P G
Sbjct: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
Query: 754 QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPD----------- 790
S PHS P +SP G G G + G G YP Q D
Sbjct: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
Query: 791 FQPSQRTSASKLGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVT 847
P Q G G +++ +L Q+ L + Q +
Sbjct: 534 LMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGY 591
Query: 848 FNKKNPPEGKRK-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900
+ PP K L Q E + + D P GT SG++SS
Sbjct: 592 GTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
Query: 901 SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD 960
S P P SP+ + S G P G G + SG +SP
Sbjct: 652 GDQSNPAQSP-------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP----- 698
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
A+ P PG Q S SS +P P E+ + + G
Sbjct: 699 ---ASIPGSQMPPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGP 749
Query: 1021 QPDLIGSLDGGAKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASR 1074
Q G + S SP + F S +Y + S PQ SR
Sbjct: 750 QQT------GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSR 797
Query: 1075 SPLVTGSPKLPPRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGP 1124
P +G P G G G GP P A+ LG M ++ + G
Sbjct: 798 PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
Query: 1125 GHPGTPGLEQVRTPTSSSGAPPP 1147
P +PG+ Q P G P P
Sbjct: 858 MTPSSPGMSQQGGP--GMGPPMP 878
Score = 45.1 bits (105), Expect = 5e-04
Identities = 161/785 (20%), Positives = 251/785 (31%), Gaps = 195/785 (24%)
Query: 142 GLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA- 200
G SQPP A G + + + +RP +LPD S +D P
Sbjct: 592 GTRSQPPLAPGKPNHEDLNLIQQ---ERPSSLPDLSGS-------------IDDLPTGTE 635
Query: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYA 260
A+ S+SGS S +QG + + P ++P FSP S PH +
Sbjct: 636 ATLSSAVSASGSTS---------SQG-----DQSNPAQSP------FSPHAS----PHLS 671
Query: 261 AGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP--PQQQPQQQQQPQQQQQQHGVFFERFS 318
+ +PGG P P VG ++ + P P P Q PQ Q S
Sbjct: 672 S---IPGGPSPSPVGSP-----VGSNQSRSGPISPASIPGSQMPPQPPGSQ--------S 715
Query: 319 GARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPP------GLLVRQN 372
+ P + + M Q+ P Q P Q P P P P G+ Q
Sbjct: 716 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
Query: 373 SCPPALPRPQQGE-------------AGTPSGGLQDGGPML------------PSQHAQF 407
S PQ + +G PS GP + PSQ
Sbjct: 776 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 835
Query: 408 ----EYPIHRLENR-------SMHPYSEPVFSMQHP---PPQQAPNQRLQHFDAPPYM-- 451
P ++NR SM P S + P PP N++ Q A
Sbjct: 836 VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 895
Query: 452 -NVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGP 510
N A+ + FPG AS S ++ ++N S P P + +S +
Sbjct: 896 ANSAQSRQGSFPGMNQSGLMAS--SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASV 953
Query: 511 PLQHP-APDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQR 569
L +P L + +++ Q + + ++ + ++ + +++
Sbjct: 954 GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
Query: 570 LRQPNLAQLGHPGD-------VGQGGL------VHGGPVGGLAQPNFEREGGSTGAG-RL 615
L + G VG+ L V +GGLAQ N ++ +
Sbjct: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
Query: 616 GTFEQQAPHLAQESAWF---------SGPHPPP--------------------------G 640
GT A L ++ + G PPP G
Sbjct: 1074 GTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQG 1133
Query: 641 DLLPRRMGGSGL---PADCGPHDPSLAP----PPPPGG---------------------- 671
P+ G + + P D P P+ P P GG
Sbjct: 1134 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1193
Query: 672 SGVLFRGPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE--- 727
+ + P Q+ M MP G +P P+ FGG G + +P+++ +
Sbjct: 1194 NSMTPNAPYQQGMSMPDVMGRMPYEPNKD-PFGGMRKVPGSSEPFMTQGQMPNSSMQDMY 1252
Query: 728 RRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPP 787
+ P + +G + FP+GA+ H G P G GG G YP
Sbjct: 1253 NQSPSGAMSNLGMGQRQQFPYGAS--YDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQ 1310
Query: 788 QPDFQ 792
QP+++
Sbjct: 1311 QPNYK 1315
Score = 41.6 bits (96), Expect = 0.005
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
QQQ QQQQQ QQQQQQH + G G P P + P +
Sbjct: 58 QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
Query: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392
Q PP PP LL + ++ PP + P G P G
Sbjct: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Score = 33.1 bits (74), Expect = 1.8
Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)
Query: 51 AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109
AMS LG +G + PYG + H Q P G GQ P+ GH +P Q
Sbjct: 1259 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1311
Query: 110 --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154
+ H G +G P + H G + YGG+ G +P
Sbjct: 1312 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1360
Query: 155 HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211
+ Q P + +R PG + +H +P + P +++S G +
Sbjct: 1361 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1407
Query: 212 SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267
+ + + QG + YPG + DM P + E Q P + + RQ
Sbjct: 1408 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1462
Query: 268 GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326
M +A M QP + PQ Q H S R +
Sbjct: 1463 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1508
Query: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366
+ PS P M+ + P P Q PP QPPP PPG
Sbjct: 1509 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1553
Score = 30.8 bits (68), Expect = 9.0
Identities = 76/358 (21%), Positives = 108/358 (30%), Gaps = 47/358 (13%)
Query: 43 GPPGPVDPAMSALGEPPILGMN----MEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPH 98
G + A+SA G G P+ HA H GG PV G Q
Sbjct: 633 GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR 692
Query: 99 HG---------------HPGSHHPHQHHPHFGGNFGGPDPG--ASCLHGGRLLGYGGAAG 141
G PGS HP + + G A ++ YG
Sbjct: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
Query: 142 GLGSQP-PFAEGYEH-----MAESQGPESFGPQR-----PGNL---PDFHSSGASSHAVP 187
G P P G H +S ++GPQ GN P + ++S++ P
Sbjct: 753 GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP 812
Query: 188 APCLPLDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQ----GAVDSLEYNYPGEAPSGH 243
P + + S N G G+ P G + S+ + PG + G
Sbjct: 813 GPGMGI--SANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGG 870
Query: 244 FDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQP 303
M P + + AA + A S GM M + P QP
Sbjct: 871 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 930
Query: 304 QQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQP 361
Q +S A M SVG +M P + P P + ++ QP
Sbjct: 931 LMNTQA-----PPYSMAPAMVNSSAASVGLA-DMMSPGESKLPLPLKADGKEEGTPQP 982
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 91.7 bits (226), Expect = 4e-18
Identities = 224/871 (25%), Positives = 290/871 (33%), Gaps = 198/871 (22%)
Query: 156 MAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSH 215
MAE + + Q+ HS+ + +P L L + P + HGL G
Sbjct: 3592 MAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRL-LTKLPGQLLPGHGLQPPQGPPGG 3650
Query: 216 SLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQV--PGGAFPGA 273
R+T G PG+ P G F + + + Q AG GG FPG
Sbjct: 3651 QAGGLRLTPGGMA------LPGQ-PGGPFLNTALAQQQQQQHSGGAGSLAGPSGGFFPGN 3703
Query: 274 SAMPRAAGMVG--LSKMHAQPPQQQPQ-----QQQQPQQQQQQHGVFFERFSGARKMPVG 326
A+ R+ G L + Q QQ+ Q QQQQ QQQQQQH +
Sbjct: 3704 LAL-RSLGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLL-------------- 3748
Query: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPP--GLLVRQNSC-PPALPRPQQ 383
+ + Q QQ P Q PQ PP GLLV+Q S PP P+
Sbjct: 3749 ------GQVAIQQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGML 3802
Query: 384 GEAGTPSGGLQDGGPMLPS-QHAQFEYPIHR-LENRSMHPYSEPVFSMQHPPPQQAPNQR 441
G A Q G + P H Q R L + + + + + QQ Q+
Sbjct: 3803 GPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQ 3862
Query: 442 LQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPP 501
QH + S G H + +S S P L +
Sbjct: 3863 -QH-----------------------QQQGSMAGLSH--LQQSLMSHSGQPKLSAQ---- 3892
Query: 502 VPDSFPSGPPLQHPAPDHQSLQQQQQQQ-------QQQQQQQQQQQQQQQQQQQQQRQNA 554
P Q Q LQQQQQQQ QQQQ QQQQQQQQ QQQQQQQ Q
Sbjct: 3893 -PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQ 3951
Query: 555 ALMIKQMASRNQQQRLRQPNLAQLG----------------------------------H 580
++Q + QQQ +Q Q+G
Sbjct: 3952 QQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQHFSS 4011
Query: 581 PGDVGQGGLVHGGPVGGL--AQPNFEREGGSTGAG---RLGTF-EQQAPHLAQESAWFSG 634
PG +G L+ G + A + EG ST G +GT E A + SG
Sbjct: 4012 PGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKPSLSG 4071
Query: 635 ----------PHPPPGDLL---PRRMGG-----------------------SGLPADCGP 658
P P P L P R+ G S A P
Sbjct: 4072 DSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVP 4131
Query: 659 H---DPSLAPPPPPGGSGVLFRGPLQEPMRMP---GEGHVPALPSPGLQFGGSLGG---- 708
H PS++ PG GP Q + P G P P P LQ G L G
Sbjct: 4132 HLLAQPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQGLPGVGIM 4191
Query: 709 --LGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSP 766
+GQL++ GV + P AL Q A RQ+ P+ PG +
Sbjct: 4192 PTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTS 4251
Query: 767 PSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLA 826
P G G GG P P P Q LG+ +P L +
Sbjct: 4252 PLQGLLGCQPQLGGF-----PGPQTGPLQ----------ELGAGPRPQGPPRL--PAPPG 4294
Query: 827 ALSTACQNMIASLG----APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGG 882
ALST LG P + K P + SQ T+ +PG+ G
Sbjct: 4295 ALSTG-----PVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGP 4349
Query: 883 TAPGAPGPGGPSGTSSSG---SKASGPPNPP 910
T PG P+ + SK GP +PP
Sbjct: 4350 TLEPPPGRVSPAAAQLADTLFSKGLGPWDPP 4380
Score = 75.9 bits (185), Expect = 2e-13
Identities = 190/771 (24%), Positives = 247/771 (32%), Gaps = 195/771 (25%)
Query: 286 SKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAP 345
+ + A+ +Q QQQQQ QQQQQQH + L PS R L + P Q
Sbjct: 3589 TNLMAEYRNKQQQQQQQQQQQQQQHSAV-----------LALSPSQSPRL-LTKLPGQLL 3636
Query: 346 PPPQQQPPQQPPQQQPP----PPPGLLVRQNSCPP----ALPRPQQ----GEAGT---PS 390
P QPPQ PP Q P G+ + P AL + QQ G AG+ PS
Sbjct: 3637 PGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSLAGPS 3696
Query: 391 GGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPY 450
GG G L S L+ R + + + Q QQ Q+ QH
Sbjct: 3697 GGFFPGNLALRSLGPDSRL----LQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVA 3752
Query: 451 MNVAKR--PRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPV------ 502
+ ++ P + G S H G L LSP G G P
Sbjct: 3753 IQQQQQQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQ 3812
Query: 503 --PDSF-PSGPPLQ------------------HPAPDHQSLQQQQQQQQQQQQQQ----- 536
P + P GP Q H+ + QQQQQQQQ QQQ
Sbjct: 3813 QHPGALGPQGPHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAG 3872
Query: 537 ----------------------------------QQQQQQQQQQQQQQRQNAALMIKQMA 562
QQQQQ QQQQQQQ +Q L +Q+
Sbjct: 3873 LSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQ 3932
Query: 563 SRNQQQRLRQPNLAQLGH------------------------------------PGDVGQ 586
+ QQQ+L+Q QL P Q
Sbjct: 3933 QQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQ 3992
Query: 587 GGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRR 646
+ G + +F G L EQ A S GP G L
Sbjct: 3993 QQVALGPGMPAKPLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIG 4052
Query: 647 MGGSGLPADCGPHDPSLA---------PPPPPGGSGVLFRGPLQEPMRMPG--EGHVPAL 695
+ + G PSL+ P P P S + LQ P+R+PG + V L
Sbjct: 4053 TTPESMATEPGEVKPSLSGDSQLLLVQPQPQPQPSSL----QLQPPLRLPGQQQQQVSLL 4108
Query: 696 PSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPG-FPFGAAGRQ 754
+ G GGS G LG S A +P ++ + +LG QPG G Q
Sbjct: 4109 HTAG---GGSHGQLGSGSSSEAS-SVPHLLAQ--------PSVSLGDQPGSMTQNLLGPQ 4156
Query: 755 STPHSGPGVNS----PPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSF 810
P N+ PP G S G G G P + +L A G
Sbjct: 4157 QPMLERPMQNNTGPQPPKPGPVLQSGQGLPGVGIMP-----------TVGQLRAQLQGVL 4205
Query: 811 NKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAV 870
K +L Q + Q + A ++ PP + T + +
Sbjct: 4206 AKNPQLRHLSPQQQQQLQALLMQRQLQQSQAV-------RQTPP-----YQEPGTQTSPL 4253
Query: 871 AGNPGSDYFPGGTAPGAPGP-GGPSGTSSSGSKASGPPNPPAQGDGTSLSP 920
G G G G PGP GP +G + GPP PA S P
Sbjct: 4254 QGLLGCQPQLG----GFPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGP 4300
Score = 63.5 bits (153), Expect = 1e-09
Identities = 195/834 (23%), Positives = 265/834 (31%), Gaps = 189/834 (22%)
Query: 37 PAFHTGGPPGPVDPAMS-ALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQ 95
P F T P P P+ + A +PP+LG + P G
Sbjct: 2187 PRFPTAPPTYPPYPSPTGAPAQPPMLGASSRP-------------------------GAG 2221
Query: 96 QPHHGHPGSHHPHQHHPHFGGNFGGPD-PGASCLHGGRLLGYGG--AAGGLGSQPPFAEG 152
QP H +H P F P P L G GG A+ L S PPF E
Sbjct: 2222 QPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGES 2281
Query: 153 ---YEHMAESQGPES--FGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLP 207
E E G S +GP G + D SSG + + ++P + P
Sbjct: 2282 RKALEVKKEELGASSPSYGPPNLGFV-DSPSSGTHLGGLELKTPDVFKAPLTPRASQVEP 2340
Query: 208 SSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSP---SDSEGQLPHYAAGRQ 264
S G EP Q S P H D+F P +D Q P R
Sbjct: 2341 QSPGLGLRPQEPPPA--QALAPS---------PPSHPDIFRPGSYTDPYAQPP--LTPRP 2387
Query: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
P + PR+ S++ A P Q Q Q + E F P
Sbjct: 2388 QPPPPESCCALPPRSLPSDPFSRVPASP-----QSQSSSQSPLTPRPLSAEAFC-----P 2437
Query: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP---PPGLLVRQN----SCPPA 377
+ P S P +PP + P +PP+ QPP G L + P A
Sbjct: 2438 SPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAA 2497
Query: 378 LPRPQQGE--AGTPSGGLQD-------GGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFS 428
LP GE A PSG + G + +F +P EP S
Sbjct: 2498 LPAGPAGELHAKVPSGQPPNFVRSPGTGAFVGTPSPMRFTFP---------QAVGEP--S 2546
Query: 429 MQHPPPQQA---PNQRLQHFDAPPYMNVAKRPRFD------FPGSAGVDRCASWNGSMHN 479
++ P PQ P+ HF P + + + P + + + G +
Sbjct: 2547 LKPPVPQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGPSSGSTGESYG 2606
Query: 480 GALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQ-------- 531
LSP P + PP PD S P L H A + ++++
Sbjct: 2607 ------LSPLRPPSV---LPPPAPDG--SLPYLSHGASQRSGITSPVEKREDPGTGMGSS 2655
Query: 532 ---------QQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPG 582
Q Q + ++Q+Q+++ L+I+Q RN ++ ++ A G G
Sbjct: 2656 LATAELPGTQDPGMSGLSQTELEKQRQRQRLRELLIRQQIQRNTLRQEKETAAAAAGAVG 2715
Query: 583 DVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPG-- 640
G G P FEQ L++ F+G
Sbjct: 2716 PPGSWGAEPSSP----------------------AFEQ----LSRGQTPFAGTQDKSSLV 2749
Query: 641 DLLPRRMGGSGLPADCGPHDPSLAPPPPPG-------GSGVLFRGPLQEPMRMPGEGHVP 693
L P ++ G L P D L+ PPPP S L G R P G +P
Sbjct: 2750 GLPPSKLSGPILGPGSFPSDDRLSRPPPPATPSSMDVNSRQLVGGSQAFYQRAPYPGSLP 2809
Query: 694 ALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRP--PPPDFATSALGGQPGFPFGAA 751
L Q L Q Q A + A S R P P P+ ALG P
Sbjct: 2810 -LQQQQQQ-------LWQQQQATAATSMRFAMSARFPSTPGPELGRQALGS----PLAGI 2857
Query: 752 GRQSTPHSGPGVNSPPSAGGG-------GGSSGGGGGGGAYPPQ-----PDFQP 793
ST GPG P AG G G GG +P Q P F P
Sbjct: 2858 ---STRLPGPGEPVPGPAGPAQFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYP 2908
Score = 55.5 bits (132), Expect = 3e-07
Identities = 208/965 (21%), Positives = 291/965 (30%), Gaps = 199/965 (20%)
Query: 141 GGLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA 200
G LGS PP A + P G L PA +P SP
Sbjct: 2111 GALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKP-----------PAGSVPGPDSPGEL 2159
Query: 201 ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYA 260
F LP + S +P + LE +P AP + SP+ + Q P
Sbjct: 2160 --FLKLPPQVPAQVPSQDPFGLA---PAYPLEPRFP-TAPPTYPPYPSPTGAPAQPPMLG 2213
Query: 261 AGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGA 320
A + PG PG + H PP Q P + R
Sbjct: 2214 ASSR-PGAGQPG--------------EFHTTPPGTPRHQPSTPDPFLKP------RCPSL 2252
Query: 321 RKMPVGLEPSVG---SRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPA 377
+ V P VG + PL+ PP P + + + +++ + P+
Sbjct: 2253 DNLAVPESPGVGGGKASEPLLSPP----PFGESRKALEVKKEE----------LGASSPS 2298
Query: 378 LPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQA 437
P G +PS G GG LE ++ + P+ Q+
Sbjct: 2299 YGPPNLGFVDSPSSGTHLGG----------------LELKTPDVFKAPLTPRASQVEPQS 2342
Query: 438 PNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGE 497
P L+ + PP +A P P + R S+ P A P L
Sbjct: 2343 PGLGLRPQEPPPAQALAPSP----PSHPDIFRPGSYT------------DPYAQPPLTPR 2386
Query: 498 FTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQ--------------------QQ 537
PP P+S + PP P+ + Q Q Q Q
Sbjct: 2387 PQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQS 2446
Query: 538 QQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGL---VHGGP 594
+ + Q R A + K + + + +LA +G GG + GP
Sbjct: 2447 PDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHT----SLGAGGFPAALPAGP 2502
Query: 595 VGGL-------AQPNFEREGGSTGA--GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPR 645
G L PNF R G TGA G P E + P P PG P
Sbjct: 2503 AGELHAKVPSGQPPNFVRSPG-TGAFVGTPSPMRFTFPQAVGEPS-LKPPVPQPGLPPPH 2560
Query: 646 RMGGSGLPAD-------------CGPHDPSLAPPPPPGGSGVLFRG--PLQEPMRMP--- 687
+ P G PS +P P GS G PL+ P +P
Sbjct: 2561 GINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGPSSGSTGESYGLSPLRPPSVLPPPA 2620
Query: 688 GEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP 747
+G +P L Q G + + + PG G+G S A+ P D S L
Sbjct: 2621 PDGSLPYLSHGASQRSGITSPVEKREDPGTGMG-SSLATAELPGTQDPGMSGLSQTELEK 2679
Query: 748 FGAAGR------QSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSA-- 799
R + +A G+ G G GA P P F+ R
Sbjct: 2680 QRQRQRLRELLIRQQIQRNTLRQEKETAAAAAGAVGPPGSWGAEPSSPAFEQLSRGQTPF 2739
Query: 800 --------------SKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLN 845
SKL LG + PS D L A S+ N +G +
Sbjct: 2740 AGTQDKSSLVGLPPSKLSGPILGPGSFPSD-DRLSRPPPPATPSSMDVNSRQLVGG---S 2795
Query: 846 VTFNKKNPPEGKRKLSQNET---DGAAVAGNPGSDYFPGGTAPGAPGP-------GGPSG 895
F ++ P G L Q + + P PGP G P
Sbjct: 2796 QAFYQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARFPSTPGPELGRQALGSPLA 2855
Query: 896 TSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSP 955
S+ G P P G + + ++ G G P G G R R S
Sbjct: 2856 GISTRLPGPGEPVPGPAGPAQFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYPVSE---- 2911
Query: 956 GTFFDKYSAAPD---SGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGK 1012
D + AP+ G+ P + A A +S PTPH K T P+
Sbjct: 2912 ----DPHRLAPEGLRGLAVSGLPPQKPSAPPAPELNNSL-----HPTPHTKGPTLPT--- 2959
Query: 1013 GAELL 1017
G EL+
Sbjct: 2960 GLELV 2964
Score = 48.1 bits (113), Expect = 5e-05
Identities = 191/912 (20%), Positives = 281/912 (30%), Gaps = 148/912 (16%)
Query: 145 SQPPFAEGYEHMAES--QGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAAS 202
S PP + + + ES PE P P AS + P PL P
Sbjct: 504 SPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEE--- 560
Query: 203 FHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAG 262
LP+S ++ L P + P P M P ++ P +
Sbjct: 561 ---LPTSPPPEASRLSPPPEES-----------PMSPPPEESPMSPPPEASRLFPPFEES 606
Query: 263 RQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARK 322
P S P A+ + PP + P++ R S
Sbjct: 607 PLSPPPEESPLSPPPEASRL--------SPPPEDSPMSPPPEESPMSPPPEVSRLS---P 655
Query: 323 MPV--GLEPSVGSRHPLMQPPQQAP--PPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPAL 378
+PV L P PL PP+++P PPP+ PP+ P PP PA
Sbjct: 656 LPVVSRLSPPP-EESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPP------EDSPAS 708
Query: 379 PRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAP 438
P P+ P + P+LP P + S P EP S + P +P
Sbjct: 709 PPPEDSLMSLPL----EESPLLPLPEEPQLCPRSEGPHLSPRP-EEPHLSPRPEEPHLSP 763
Query: 439 NQRLQHF----DAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGAL--DNHLSPSAYP 492
H + P V + P P + G + +H + HLSP
Sbjct: 764 QAEEPHLSPQPEEPCLCAVPEEPHLS-PQAEG-PHLSPQPEELHLSPQTEEPHLSP---- 817
Query: 493 GLPGE-FTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
+P E P P+ P + P + + + ++ + ++ ++ Q
Sbjct: 818 -VPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPA 876
Query: 552 QNAALMIKQMASRNQQQRLRQPNLAQLGHP-----------GDVGQGGLVHG-------- 592
+ + L +P L++ G P G+ L
Sbjct: 877 PEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLP 936
Query: 593 ---------------GPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHP 637
P+G L P F +G S L + P A + P P
Sbjct: 937 PPLSPIITAAAPPALSPLGELEYP-FGAKGDSDPESPLAAPILETPISPPPEANCTDPEP 995
Query: 638 PPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG--PLQEPMRMPGEGHVPAL 695
P +LP G + GP P L P PP S +L P P P + PAL
Sbjct: 996 VPPMILPPSPG-----SPVGPASPILMEPLPPQCSPLLQHSLVPQNSP---PSQCSPPAL 1047
Query: 696 PSPGLQFGGSLGGLGQLQSPGAGVGLPSAASER--RPPPPDFATSALGGQPGFPFGAAGR 753
P L L +G++ L +E+ P P SA P P G
Sbjct: 1048 P---LSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPS-PMGDLSC 1103
Query: 754 QSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
+ P P ++ G G G+ P +P P S K + L
Sbjct: 1104 PA-PSPAPALDDFSGLGEDTAPLDGIDAPGSQP-EPGQTPGSLASELKGSPVLLDPEELA 1161
Query: 814 SSKDNLFGQSC--LAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNE----TDG 867
C A + C+ P V PP + NE + G
Sbjct: 1162 PVTPMEVYPECKQTAGQGSPCEEQ----EEPRAPVA---PTPPTLIKSDIVNEISNLSQG 1214
Query: 868 AAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLEST 927
A A PGS+ G+P P G G S S PA+ +G+ +L T
Sbjct: 1215 DASASFPGSE-----PLLGSPDPEG--GGSLSMELGVSTDVSPARDEGSLRLCTDSLPET 1267
Query: 928 SGN----DGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASG 983
+ G +SGG G R+R S + + G PG+++ G
Sbjct: 1268 DDSLLCDAGTAISGGKAEGEKGRRRSSP-----------ARSRIKQGRSSSFPGRRRPRG 1316
Query: 984 AAVGGSSAGETR 995
A GG G R
Sbjct: 1317 GAHGGRGRGRAR 1328
Score = 45.8 bits (107), Expect = 3e-04
Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 518 DHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRL--RQPNL 575
D QQ++ + + +QQQQQQQQQQQQQ+ +A L + S +Q RL + P
Sbjct: 3579 DQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLAL----SPSQSPRLLTKLPGQ 3634
Query: 576 AQLGHPGDVGQGGLVHGGPVGGL-AQPNFEREGGSTGAGRLGT--FEQQAPHLAQESAWF 632
GH QG GG GGL P G G L T +QQ + +
Sbjct: 3635 LLPGHGLQPPQG--PPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGSL 3692
Query: 633 SGPHPP--PGDLLPRRMG 648
+GP PG+L R +G
Sbjct: 3693 AGPSGGFFPGNLALRSLG 3710
Score = 44.7 bits (104), Expect = 6e-04
Identities = 87/426 (20%), Positives = 140/426 (32%), Gaps = 80/426 (18%)
Query: 160 QGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLEP 219
+ P S P+ P +S S P PL ++ + + P S + L P
Sbjct: 446 ESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSP 505
Query: 220 RRVTNQ-GAVDSLEYNYPGEAPSG---HFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASA 275
++ ++ + P E+P + P ++ P + P S
Sbjct: 506 PPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSP 565
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQ---QQQPQQQQQQHGVFFERFSGARKMPVGLE---- 328
P A+ + + PP++ P ++ P + F F + P E
Sbjct: 566 PPEASRL-------SPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLS 618
Query: 329 -PSVGSR-------HPLMQPPQQAP--------------------PPPQQQPPQQPPQQQ 360
P SR P+ PP+++P PPP++ P PP++
Sbjct: 619 PPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEES 678
Query: 361 PPPPPGLLVRQNSCP---PALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRL-EN 416
P PP R + P P P P+ A P +D LP + E P+ L E
Sbjct: 679 PTSPPPEASRLSPPPEDSPTSPPPEDSPASPPP---EDSLMSLPLE----ESPLLPLPEE 731
Query: 417 RSMHPYSE-PVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNG 475
+ P SE P S + P +P H +P P+ + P V
Sbjct: 732 PQLCPRSEGPHLSPRPEEPHLSPRPEEPHL-SPQAEEPHLSPQPEEPCLCAVPE------ 784
Query: 476 SMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGP----PLQHPAPDHQSLQQQQQQQQQ 531
+ HLSP A G P P+ P P P P+ L Q ++
Sbjct: 785 -------EPHLSPQA----EGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHL 833
Query: 532 QQQQQQ 537
Q ++
Sbjct: 834 SPQSEE 839
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/223 (23%), Positives = 80/223 (35%), Gaps = 27/223 (12%)
Query: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
Q QP+ Q ++ G K V LEP + + PL + PPP++ P
Sbjct: 393 QGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEA--PLNEE-MPLLPPPEESPL 449
Query: 354 QQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHR 413
PP++ P PP R + P LP EA S L++ P + + P
Sbjct: 450 SPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPP--- 506
Query: 414 LENRSMHPYSEPVFSMQHPPPQQAPNQRLQ-HFDAPPYMNVAKRPRFDFPGSAGVDRCAS 472
E+ P E S PP + P+ L+ PP + P + P S +
Sbjct: 507 PESSPFSPLEESPLS---PPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEEL-- 561
Query: 473 WNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHP 515
P++ P +PP +S S PP + P
Sbjct: 562 ---------------PTSPPPEASRLSPPPEESPMSPPPEESP 589
Score = 35.0 bits (79), Expect = 0.48
Identities = 50/161 (31%), Positives = 63/161 (39%), Gaps = 21/161 (13%)
Query: 285 LSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF-SGARKMP-VGLEPSV-GSRHPLMQPP 341
L K Q QP QQQ QQQQQQH + + A +P G PS+ GS+ L
Sbjct: 3260 LQKKQQLSAQLQPAQQQ--QQQQQQHSLLSAPGPAQAMSLPHEGSSPSLAGSQQQLSLGL 3317
Query: 342 QQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLP 401
A P QP P PP ++Q P QG + G Q G ++P
Sbjct: 3318 AGARQPGLPQP------LMPTQPPAHALQQRLAPSMAMVSNQGHMLSGQHGGQAG--LVP 3369
Query: 402 SQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRL 442
Q +Q P+ S P SM P Q A Q+L
Sbjct: 3370 QQSSQ---PV-----LSQKPMGTMPPSMCMKPQQLAMQQQL 3402
Score = 33.9 bits (76), Expect = 1.1
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 520 QSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAAL 556
+ L + ++++ Q++QQ Q Q QQQQQQQ+Q++ L
Sbjct: 3250 EDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLL 3286
Score = 33.9 bits (76), Expect = 1.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 328 EPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPP 362
EP V S PL P+ A P P+ +PP++ +PP
Sbjct: 4943 EPPVPSPLPLASSPESARPKPRARPPEEGEDSRPP 4977
Score = 33.5 bits (75), Expect = 1.4
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 518 DHQSLQQQQQQQQQQQQQQQQQQQQQQQQ 546
+H+ + Q++QQ Q Q QQQQQQQQQ
Sbjct: 3254 EHEKKELQKKQQLSAQLQPAQQQQQQQQQ 3282
Score = 33.1 bits (74), Expect = 1.8
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 512 LQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAAL----MIKQMASRNQQ 567
L+H + Q QQ Q Q QQQQQQQQQ Q +L +A QQ
Sbjct: 3253 LEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAPGPAQAMSLPHEGSSPSLAGSQQQ 3312
Query: 568 QRL-----RQPNLAQ 577
L RQP L Q
Sbjct: 3313 LSLGLAGARQPGLPQ 3327
Score = 33.1 bits (74), Expect = 1.8
Identities = 39/130 (30%), Positives = 45/130 (34%), Gaps = 25/130 (19%)
Query: 236 PGEAPSGHFDMFSPS--DSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPP 293
P +A S + SPS S+ QL AG + PG P M QPP
Sbjct: 3291 PAQAMSLPHEGSSPSLAGSQQQLSLGLAGARQPGLPQP---------------LMPTQPP 3335
Query: 294 QQQPQQQQQPQQ---QQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQ 350
QQ+ P Q H SG GL P S+ L Q P PP
Sbjct: 3336 AHALQQRLAPSMAMVSNQGH-----MLSGQHGGQAGLVPQQSSQPVLSQKPMGTMPPSMC 3390
Query: 351 QPPQQPPQQQ 360
PQQ QQ
Sbjct: 3391 MKPQQLAMQQ 3400
Score = 32.7 bits (73), Expect = 2.4
Identities = 104/453 (22%), Positives = 143/453 (31%), Gaps = 81/453 (17%)
Query: 96 QPHHGHPGSHHPHQHHPHFGGN--FGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGY 153
+P PG PH + HFG G P + G G G S E Y
Sbjct: 2548 KPPVPQPGLPPPHGINSHFGPGPTLGKPQSTNYTVATGNFHPSGSPLGP--SSGSTGESY 2605
Query: 154 EHMAESQGPESFGPQRP-GNLPDFHSSGASSHAVPAPCLPLDQSPNRA-------ASFHG 205
++ + P P P G+LP + S GAS + + + P A G
Sbjct: 2606 G-LSPLRPPSVLPPPAPDGSLP-YLSHGASQRSGITSPVEKREDPGTGMGSSLATAELPG 2663
Query: 206 L--PSSSGSDSHSLEPRRVTNQ-------GAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL 256
P SG LE +R + + E + P S G
Sbjct: 2664 TQDPGMSGLSQTELEKQRQRQRLRELLIRQQIQRNTLRQEKETAAAAAGAVGPPGSWGAE 2723
Query: 257 PHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFER 316
P A Q+ G P A +++ +VGL P P + +
Sbjct: 2724 PSSPAFEQLSRGQTPFAGTQDKSS-LVGLPPSKLSGPILGPGSFPSDDRLSRPPPP---- 2778
Query: 317 FSGARKMPVGLEPSVGSRHPLMQ-PPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCP 375
+ M V VG Q P P QQQ Q QQQ + ++
Sbjct: 2779 -ATPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARF 2837
Query: 376 PALPRPQQGE--AGTPSGGLQ-----DGGPML-PSQHAQFEYPIHRLENRSMHPYSEPVF 427
P+ P P+ G G+P G+ G P+ P+ AQF H ++ + + P P F
Sbjct: 2838 PSTPGPELGRQALGSPLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQ-KGLGPGGTP-F 2895
Query: 428 SMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLS 487
Q PP +RPRF +P S R L+
Sbjct: 2896 PGQGPP---------------------QRPRF-YPVSEDPHR----------------LA 2917
Query: 488 PSAYPGLPGEFTPPVPDSFPSGPPLQ---HPAP 517
P GL PP S P P L HP P
Sbjct: 2918 PEGLRGLAVSGLPPQKPSAPPAPELNNSLHPTP 2950
Score = 30.8 bits (68), Expect = 9.0
Identities = 39/139 (28%), Positives = 47/139 (33%), Gaps = 30/139 (21%)
Query: 637 PPPGDL----LPRRMGGSG----LPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPG 688
PPP +L LP + S P P + L+PPP L PL P P
Sbjct: 469 PPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESP- 527
Query: 689 EGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPF 748
PSP L+ S SP P S PPP + TS P
Sbjct: 528 -------PSPALETPLSPPPEASPLSP------PFEESPLSPPPEELPTS--------PP 566
Query: 749 GAAGRQSTPHSGPGVNSPP 767
A R S P ++ PP
Sbjct: 567 PEASRLSPPPEESPMSPPP 585
>gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens]
Length = 1745
Score = 91.3 bits (225), Expect = 6e-18
Identities = 251/1097 (22%), Positives = 344/1097 (31%), Gaps = 241/1097 (21%)
Query: 138 GAAGGLGSQPPFAEG--YEHMAESQGPESF-GPQRPGNLPDFHSSGASSHAVPAPCLPLD 194
G G G +G +E + GP+ GP P P F P D
Sbjct: 373 GEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGF---------------PGD 417
Query: 195 QSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEG 254
P A GLP G D P G V + + + G + G F + ++
Sbjct: 418 PGPPGPA---GLPGIPGIDGIRGPP------GTVIMMPFQFAGGSFKGPPVSFQQAQAQA 468
Query: 255 QLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHG--- 311
L + P PG + G VGL ++ + Q P+ Q HG
Sbjct: 469 VLQQTQLSMKGP----PGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPG 524
Query: 312 ----VFFERFSGARKMP--------------VGLEPSVGSRHPLMQPPQQAPPPPQQQ-- 351
+ GAR +P GL G R Q PP +
Sbjct: 525 RVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERG 584
Query: 352 ---PPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFE 408
PP Q P P GLL PR G G P DG P
Sbjct: 585 AEGPPGPTGQAGEPGPRGLLG---------PRGSPGPTGRPGVTGIDGAPGAKG------ 629
Query: 409 YPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVD 468
++ P EP PP Q N Q P + + PG+ G+
Sbjct: 630 ---------NVGPPGEP------GPPGQQGNHGSQGLPGPQGL-IGTPGEKGPPGNPGIP 673
Query: 469 RCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQ 528
+G + + + G PG PP +P GP ++ LQ ++ +
Sbjct: 674 GLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPP---GYP-GPRGVKGTSGNRGLQGEKGE 729
Query: 529 Q----------------QQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
+ Q + + + + + + A S ++ +L
Sbjct: 730 KGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGV 789
Query: 573 PNLAQLGHPGDVG-QGGLVHGGPVGGLA---------QPNFEREGGSTGA----GRLGTF 618
P L G+PG G +G + GP+G + QP E E G G+ G+ G
Sbjct: 790 PGLP--GYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGAT 847
Query: 619 EQQAPH--LAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGP--HDPSLAPPPPPGGSGV 674
Q P + Q+ A P P LP G G P GP H P PG G
Sbjct: 848 GQPGPKGDVGQDGA----PGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGE 903
Query: 675 L-FRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPP 733
L F+G P G L G G +G LG+ PG P E+ P
Sbjct: 904 LGFQGQTGPP------GPAGVLGPQGKT--GEVGPLGERGPPGP----PGPPGEQGLPGL 951
Query: 734 DFATSALG--GQPGFPFGAAGRQST-----PHSGPGVNSPPSAGGGGGSSGGGGGGGAYP 786
+ A G G PG P G G P GPG P G G G G G+
Sbjct: 952 EGREGAKGELGPPG-PLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGS-- 1008
Query: 787 PQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNV 846
P +R G + L GQS +G
Sbjct: 1009 ------PGERGPLGPAGGIGLP------------GQS----------GSEGPVGPAGKKG 1040
Query: 847 TFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSSGSKASG 905
+ ++ PP G G D PG P G PG GPSG
Sbjct: 1041 SRGERGPP-----------------GPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGA 1083
Query: 906 PPNPPAQGDGTSLSP--NYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYS 963
P + ++GD P + +G+ G P + G RG PG F K
Sbjct: 1084 PGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRG---------PPGLFGQK-- 1132
Query: 964 AAPDSG--------GAPGVS--PGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKG 1013
D G G PG+ PG G VG + GAP P + P+ +G
Sbjct: 1133 --GDDGVRGFVGVIGPPGLQGLPGPPGEKGE-VGDVGSMGPHGAPGP--RGPQGPTGSEG 1187
Query: 1014 AELLLGD--QPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVK 1071
L G QP +G + G + D+ P G + + + E S + A
Sbjct: 1188 TPGLPGGVGQPGAVG--EKGERGDAGDP--GPPGAPGIPGPKGDIGEKGDSGPSGAAGPP 1243
Query: 1072 ASRSPLVTGSPK--LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGP---GH 1126
+ P K + P G+ G+ GP P G+ P GG G P G
Sbjct: 1244 GKKGPPGEDGAKGSVGPTGL-PGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGE 1302
Query: 1127 PGTPGLEQVRTPTSSSG 1143
PG PG R P+ G
Sbjct: 1303 PGAPGPPGKRGPSGHMG 1319
Score = 91.3 bits (225), Expect = 6e-18
Identities = 300/1198 (25%), Positives = 366/1198 (30%), Gaps = 241/1198 (20%)
Query: 43 GPPGPVD----PAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPH 98
GPPGP P + + PP + M P+ F QAQ Q
Sbjct: 419 GPPGPAGLPGIPGIDGIRGPPGTVIMM-PFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSM 477
Query: 99 HGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAE 158
G PG G G P P L G+ G G G AEG +
Sbjct: 478 KGPPGPV----------GLTGRPGPVG-------LPGHPGLKGEEG-----AEGPQGPRG 515
Query: 159 SQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE 218
QGP GP PG + GA A LP D P F GLP G +
Sbjct: 516 LQGPH--GP--PGRVGKMGRPGADG----ARGLPGDTGPKGDRGFDGLPGLPGEKGQRGD 567
Query: 219 PRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPR 278
V G PGE G P GQ AG P G G P
Sbjct: 568 FGHVGQPGP--------PGE--DGERGAEGPPGPTGQ-----AGEPGPRGLL-GPRGSPG 611
Query: 279 AAGMVGLSKMHAQPPQQQ---PQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRH 335
G G++ + P + P + P QQ HG S P GL + G +
Sbjct: 612 PTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHG------SQGLPGPQGLIGTPGEKG 665
Query: 336 PLMQPPQQAPP--------PPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQ----- 382
P P P P + P + Q PP G PP P P+
Sbjct: 666 PPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAG--------PPGYPGPRGVKGT 717
Query: 383 ------QGEAGTPSGGLQDGGPM------LPSQHAQFEYPIHRLENRSMHPYSEPVFSMQ 430
QGE G +DG P L + P R E+ P + + +
Sbjct: 718 SGNRGLQGEKGEKG---EDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGE 774
Query: 431 HPPPQQAPNQRLQHFDAPPYMNVAKRPR--FDFPGSAGVDRCASWNGSMHNGALDNHLSP 488
PP A + P P+ FPG G +G L+ P
Sbjct: 775 EGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGP 834
Query: 489 SAYPGLPGEFTPP--VPDSFPSGPPLQHPAPD---HQSLQQQQQQQQQQQQQQQQQQQQQ 543
PG GE P P G Q AP + L Q + Q +
Sbjct: 835 ---PGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGK 891
Query: 544 QQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHG-GPVGGLAQPN 602
+ Q L + + P + G G +G+ G GP G P
Sbjct: 892 DGRPGHPGQRGELGFQGQTGPPGPAGVLGPQ-GKTGEVGPLGERGPPGPPGPPGEQGLPG 950
Query: 603 FE-REGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDP 661
E REG G G ++ P + F GP PGD G +GL D GP
Sbjct: 951 LEGREGAKGELGPPGPLGKEGPAGLRG---FPGPKGGPGD-----PGPTGLKGDKGP--- 999
Query: 662 SLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGL 721
P P G +G PGE P P+ G+ G G G P G
Sbjct: 1000 ----PGPVGANG------------SPGE-RGPLGPAGGIGLPGQSGSEG----PVGPAGK 1038
Query: 722 PSAASERRPPPP---DFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGG 778
+ ER PP P D LG P P GAAG P G A G GS G
Sbjct: 1039 KGSRGERGPPGPTGKDGIPGPLG--PLGPPGAAG----PSGEEGDKGDVGAPGHKGSKGD 1092
Query: 779 GGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIAS 838
G G P QP R A G LFGQ + +
Sbjct: 1093 KGDAG-----PPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKG----DDGVRGFVGV 1143
Query: 839 LGAPNLNVTFNKKNPPEGKRKLS----------------QNETDGAAVAGNPGSDYFPGG 882
+G P L PP K ++ Q T G PG PG
Sbjct: 1144 IGPPGLQ---GLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGA 1200
Query: 883 TA-------------PGAPGPGGPSGT-----SSSGSKASGPPN---PPAQGDGTSLSPN 921
PGAPG GP G S S A+GPP PP + DG S
Sbjct: 1201 VGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGE-DGAKGSVG 1259
Query: 922 YTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQ 978
T G+ G P G G G K D G V PG A GAPG PG+
Sbjct: 1260 PT--GLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGP-----PGASGEPGAPG-PPGK 1311
Query: 979 QQASGAAVGGSSAGE--TRGAPTPH-EKALTSPSWGKGAELLLGDQ-----------PDL 1024
+ SG GE +G P P T P +G +G + P L
Sbjct: 1312 RGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGL 1371
Query: 1025 IGSLDG----GAKSDSSSPNV-------GEFASDEVSTSYANEDEVSSSSDNPQALVKAS 1073
+G+ G S P + GE + E D Q L
Sbjct: 1372 LGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGD--QGLPGVQ 1429
Query: 1074 RSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPG 1131
P G P PP +G+ H PP G S +P S G G G G PG
Sbjct: 1430 GPPGPKGDPG-PPGPIGSLGH--PGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPG 1484
Score = 82.8 bits (203), Expect = 2e-15
Identities = 184/730 (25%), Positives = 223/730 (30%), Gaps = 192/730 (26%)
Query: 488 PSAYPGLPGEFTPPVPDSFPSGPPLQ--HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQ 545
P PG PG+ PP P P P + P + Q + QQ Q Q
Sbjct: 408 PPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQ 467
Query: 546 QQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFER 605
QQ Q L+ G PG VG G GPVG P +
Sbjct: 468 AVLQQTQ----------------------LSMKGPPGPVGLTG--RPGPVGLPGHPGLKG 503
Query: 606 EGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDL----LPRRMGGSGLPADCGPHDP 661
E G+ G Q P Q GPH PPG + P G GLP D G
Sbjct: 504 EEGAEG--------PQGPRGLQ------GPHGPPGRVGKMGRPGADGARGLPGDTG---- 545
Query: 662 SLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGL 721
P G G F G +P LP G G G + PG
Sbjct: 546 ------PKGDRG--FDG-------------LPGLPGE----KGQRGDFGHVGQPGP---- 576
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P ER P T G+PG P G G P PG P G G+ G G
Sbjct: 577 PGEDGERGAEGPPGPTGQ-AGEPG-PRGLLG----PRGSPGPTGRPGVTGIDGAPGAKGN 630
Query: 782 GGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGA 841
G PP P Q+ + GS P G
Sbjct: 631 VG--PPGEPGPPGQQGNH--------GSQGLP--------------------------GP 654
Query: 842 PNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSSG 900
L T +K PP GNPG PG P G PG GP+G +
Sbjct: 655 QGLIGTPGEKGPP-----------------GNPGIPGLPGSDGPLGHPGHEGPTGEKGAQ 697
Query: 901 SK--ASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTF 958
++GPP P S N L+ G G+ G +G K D G PG
Sbjct: 698 GPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGED-GFPGFKGDVGLKGDQG--KPG-- 752
Query: 959 FDKYSAAPDSGGAPGVSPGQQQASGAAVGG--SSAGETRGAPTPHEKALTSPSWGKGAEL 1016
AP G G + QA A G SAGE P KG+
Sbjct: 753 ------APGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGS-- 804
Query: 1017 LLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSP 1076
+G P +G + KS + E + ++ P+ V +P
Sbjct: 805 -IG-FPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAP 862
Query: 1077 LVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVR 1136
+ G LP G GPK P P G G PGHPG G +
Sbjct: 863 GIPGEKGLPGLQGPPGFPGPKGP---------------PGHQGKDGRPGHPGQRGELGFQ 907
Query: 1137 TPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKG-----GKKGECAV-GAS 1190
T G P + P Q E PLG +G G GE + G
Sbjct: 908 GQTGPPG--PAGVLGP-------------QGKTGEVGPLGERGPPGPPGPPGEQGLPGLE 952
Query: 1191 GAQNGDSELG 1200
G + ELG
Sbjct: 953 GREGAKGELG 962
Score = 61.6 bits (148), Expect = 5e-09
Identities = 168/687 (24%), Positives = 205/687 (29%), Gaps = 147/687 (21%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHP 637
G PG+ GQ G G VG P + E G+ G G G + P GP
Sbjct: 557 GLPGEKGQRG--DFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPR------GLLGPRG 608
Query: 638 PPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRM---PGEGHVP 693
PG P G G P G P P PPG G L P + PGE P
Sbjct: 609 SPGPTGRPGVTGIDGAPGAKGNVGPP-GEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPP 667
Query: 694 ALPS-PGLQFGGSLGGLGQLQSPG-----AGVGLPSAASERRPPPPDFATSALG------ 741
P PGL GS G LG G G P +A P P G
Sbjct: 668 GNPGIPGLP--GSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQG 725
Query: 742 -----GQPGFP-----FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF 791
G+ GFP G G Q P G P G G G G G P
Sbjct: 726 EKGEKGEDGFPGFKGDVGLKGDQGKP----GAPGPRGEDGPEGPKGQAGQAGEEGP---- 777
Query: 792 QPSQRTSASKLGALSLGSF-NKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNK 850
P KLG L + +P K ++ L + ++ G P L +
Sbjct: 778 -PGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKS--GKTGQPGLE---GE 831
Query: 851 KNPPEGKRKLSQNETDGA----------AVAGNPGSDYFPGGTAP-GAPGPGGPSGTSSS 899
+ PP + + Q G G PG PG P G PGP GP G
Sbjct: 832 RGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGK 891
Query: 900 GSKAS-----------------------------------------GPPNPPA------- 911
+ GPP PP
Sbjct: 892 DGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGL 951
Query: 912 ---QGDGTSLSPNYTL--ESTSGNDG--KPVSGGGGRGRGRRKRDSGHVSP----GTFFD 960
+G L P L E +G G P G G G K D G P G+ +
Sbjct: 952 EGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGE 1011
Query: 961 KYSAAPDSG-GAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEK-------ALTSPSWGK 1012
+ P G G PG S G + G A S GE RG P P K P
Sbjct: 1012 RGPLGPAGGIGLPGQS-GSEGPVGPAGKKGSRGE-RGPPGPTGKDGIPGPLGPLGPPGAA 1069
Query: 1013 GAELLLGDQPDLIGSLDGGAKSDS------SSPNV-------GEFASDEVSTSYANEDEV 1059
G GD+ D+ G+K D P + G +D
Sbjct: 1070 GPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLF 1129
Query: 1060 SSSSDN-PQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSY 1118
D+ + V P + G P P G+ G P A G T + +
Sbjct: 1130 GQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTP 1189
Query: 1119 GGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
G GG G PG G + R G P
Sbjct: 1190 GLPGGVGQPGAVGEKGERGDAGDPGPP 1216
Score = 56.2 bits (134), Expect = 2e-07
Identities = 79/238 (33%), Positives = 92/238 (38%), Gaps = 47/238 (19%)
Query: 579 GHPGDVGQGGLVHG-GPVGGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPH 636
G PG+ G G V G GP G +P G G +G +G ++ A+ GP
Sbjct: 1280 GSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEP---GPD 1336
Query: 637 PPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
PPG P MG G P GP L P P G L P Q M PG P P
Sbjct: 1337 GPPGRTGP--MGARGPPGRVGPE--GLRGIPGPVGEPGLLGAPGQ--MGPPG----PLGP 1386
Query: 697 S--PGLQFG-------GSLGGLGQLQSPGAG-----VGLPSAASERRPPPPDFATSALGG 742
S PGL+ G +G +G + PG GLP PP P G
Sbjct: 1387 SGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQG---PPGPK-------G 1436
Query: 743 QPGFPFGAAGRQSTPHSGP-GVNSPPSAGGGGGSSGG----GGGGGAYPPQPDFQPSQ 795
PG P G G S H GP GV P G GS G G G A PP P P++
Sbjct: 1437 DPGPP-GPIG--SLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAE 1491
Score = 41.2 bits (95), Expect = 0.007
Identities = 110/420 (26%), Positives = 132/420 (31%), Gaps = 63/420 (15%)
Query: 35 KAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGH-SELHAGGLQAQPVHGFFG 93
+ PA H G PPG D A G P + G + RG + GLQ P
Sbjct: 1105 RGPAGHPG-PPG-ADGAQGRRGPPGLFGQKGDD---GVRGFVGVIGPPGLQGLPGPP--- 1156
Query: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQ------- 146
G++ G GS PH G G L GG +G GA G G +
Sbjct: 1157 GEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGG--VGQPGAVGEKGERGDAGDPG 1214
Query: 147 PPFAEGYE-------HMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNR 199
PP A G +S + GP PG GA P LP D P
Sbjct: 1215 PPGAPGIPGPKGDIGEKGDSGPSGAAGP--PGKKGPPGEDGAKGSVGPTG-LPGDLGPPG 1271
Query: 200 AASFHGLPSSSGSDSHSLEPRRVTNQGAVD-SLEYNYPG----EAPSGHFDMFSPSDSEG 254
G+ S G +P V G S E PG PSGH +G
Sbjct: 1272 DPGVSGIDGSPGEKG---DPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKG 1328
Query: 255 QL----PHYAAGRQVPGGAFP-----GASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQ 305
P GR P GA G + G VG + P Q P P
Sbjct: 1329 AKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSG 1388
Query: 306 QQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPP------PPQQQPPQQPPQQ 359
G + K +GL +G PP +A P Q PP
Sbjct: 1389 LPGLKG---DTGPKGEKGHIGLIGLIG-------PPGEAGEKGDQGLPGVQGPPGPKGDP 1438
Query: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPS--GGLQDGGPMLPSQHAQFEYPIHRLENR 417
PP P G L A P Q+G G+P G D GP P +H L R
Sbjct: 1439 GPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRR 1498
Score = 36.6 bits (83), Expect = 0.16
Identities = 75/313 (23%), Positives = 109/313 (34%), Gaps = 57/313 (18%)
Query: 914 DGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPG 973
D +L+P T+ + G P G+G+GR+K G G K S P
Sbjct: 223 DCDNLAPAATV-APQGEPETPRPRRKGKGKGRKK---GRGRKGKGRKKNKEIWTSSPPPD 278
Query: 974 VSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSP-SWGKGAELLLGD-QPDL---IGSL 1028
+ Q + + PTP +TS + G A +L PD +G+L
Sbjct: 279 SAENQTSTD---IPKTETPAPNLPPTPTPLVVTSTVTTGLNATILERSLDPDSGTELGTL 335
Query: 1029 DGGAKSDSSSPNVGEFASDEVSTSYANEDEVS--------SSSDNPQALVKASRSPLVTG 1080
+ A + + D + Y + + + P + K + G
Sbjct: 336 ETKAAREDEEGDDSTMGPDFRAAEYPSRTQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPG 395
Query: 1081 SPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTS 1140
+P P+GV G GP PP P G G G PG PG++ +R P
Sbjct: 396 APG--PQGV-VGPSGPPGPP------------GFPGDPGPPGPAGLPGIPGIDGIRGPPG 440
Query: 1141 SSGAPP------PDEIHPLEILQAQIQLQRQQFSIS------------EDQPLGLKG--G 1180
+ P + P+ QAQ Q QQ +S P+GL G G
Sbjct: 441 TVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVGLPGHPG 500
Query: 1181 KKGECAVGASGAQ 1193
KGE GA G Q
Sbjct: 501 LKGE--EGAEGPQ 511
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 91.3 bits (225), Expect = 6e-18
Identities = 137/503 (27%), Positives = 182/503 (36%), Gaps = 99/503 (19%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG P P P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAP 1145
GHPG+PG + + T +G+P
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSP 550
Score = 61.6 bits (148), Expect = 5e-09
Identities = 146/574 (25%), Positives = 185/574 (32%), Gaps = 75/574 (13%)
Query: 593 GPVGGLAQPNFEREGGSTGA-GRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSG 651
GP G +P + G+ G GR+G+ P A S GP PPG P G G
Sbjct: 122 GPPGPTGRPGLPGDKGAIGMPGRVGS-----PGDAGLS--IIGPRGPPGQ--PGTRGFPG 172
Query: 652 LPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPS-PGLQFGGSLGGLG 710
P G D P P G G+ GP +P +G P + S+
Sbjct: 173 FPGPIGL-DGKPGHPGPKGDMGLT--GPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAAL 229
Query: 711 QLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAG 770
+ A LP S R PPP G+ Q++ PG PP
Sbjct: 230 RSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPS 281
Query: 771 GGGGSSGGGGGGGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCL 825
G G G G G PP P P + + G + G K +K
Sbjct: 282 GPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK--------- 332
Query: 826 AALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP 885
A A M G P + P L Q G A G PG P
Sbjct: 333 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PP 390
Query: 886 GAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGR 945
G PGP GP G + + GPP P + + G+ G+P G+G
Sbjct: 391 GLPGPPGPKGEAGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGE 442
Query: 946 RKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKAL 1005
+G+++ + A G PG+ PGQ GA GE G P P
Sbjct: 443 MVDYNGNINEALQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI-GLPGP----- 492
Query: 1006 TSPSWGKGAELLLGDQ----PDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYAN---E 1056
KG GD P DG G K ++ P ++ T A E
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGE 552
Query: 1057 DEVSSSSDNPQALVKASRSPLVTGSPKLP-------PRGVGAGEHGPKAPPPALGLGIMS 1109
+ NP A V P G P P P+G AG G K G
Sbjct: 553 KGEAGEKGNPGAEVPGLPGP--EGPPGPPGLQGVPGPKGE-AGLDGAKGEKGFQGEKGDR 609
Query: 1110 NSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSG 1143
P + G G PG PGTPG V P G
Sbjct: 610 GPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKG 643
Score = 57.4 bits (137), Expect = 9e-08
Identities = 129/530 (24%), Positives = 167/530 (31%), Gaps = 88/530 (16%)
Query: 492 PGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
PG PG P D +GPP Q P P Q Q+ ++ Q + ++ R
Sbjct: 183 PGHPG----PKGDMGLTGPPGQ-PGP-------QGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 552 QNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG 611
+ + +K + N + P + + G+ Q + GP G P G S
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQ--GPPGPPGPP-----GPSGP 283
Query: 612 AGRLGTFEQQAPHLAQESAWFSGPHPPPGDL----LPRRMGGSGLPADCGPHDPSLAPPP 667
G G P GP P GD R G G+P G H AP
Sbjct: 284 LGHPGLPGPMGP------PGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAP-- 335
Query: 668 PPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE 727
G+ G EP +G A SPGL G LG G+ G +G
Sbjct: 336 -----GIAVAGMKGEPGIPGTKGEKGAEGSPGLP--GLLGQKGEKGDAGNSIG----GGR 384
Query: 728 RRPPPPDFATSALGGQPGFPFGAAG--RQSTPHSGPGVNSPPSAGGGGGSSGGGGGGG-- 783
P PP L G PG P G AG Q P PG A G G G G G
Sbjct: 385 GEPGPP-----GLPGPPG-PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 784 AYPPQPDFQPSQRTSASKLGALSL-------GSFNKPSSKDNLFGQSCLAAL-------- 828
D+ + + ++ L+L G P + + GQ L
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDG 497
Query: 829 STACQNMIASLGAPNLNVTFNKKNPPEGK----------RKLSQNETDGAAVAGNPGS-- 876
+ +G P K PP K K + ET A G G
Sbjct: 498 EKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG 557
Query: 877 -DYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPV 935
PG PG PGP GP G G P P + + G+ G P+
Sbjct: 558 EKGNPGAEVPGLPGPEGPPGPPG----LQGVPGPKGEAGLDGAKGEKGFQGEKGDRG-PL 612
Query: 936 SGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAA 985
G G R G +PG A P PG +GAA
Sbjct: 613 GLPGASGLDGRPGPPG--TPGPIGVPGPAGPKGERGSKGDPGMTGPTGAA 660
Score = 55.5 bits (132), Expect = 3e-07
Identities = 100/383 (26%), Positives = 125/383 (32%), Gaps = 40/383 (10%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFER--EGGSTGAGR--LGTFEQQAPHLAQESAWFSG 634
G PG G+ G + GL E+ G S G GR G P + A G
Sbjct: 347 GIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDG 406
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG P G G + GP P + P G V + G + E ++ E A
Sbjct: 407 QVGPPGQ--PGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ---EIRTLA 461
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQPGFPFGAAG 752
L P G GQ+ PGA G+P E P P G G+PG G G
Sbjct: 462 LMGPP-------GLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDGEKGPRGKPG-DMGPPG 512
Query: 753 RQSTP-HSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
Q P GP G N P + G G G G G+ + + A G
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 572
Query: 808 GSFNKPSSKDNLFGQSCLAALSTAC--------QNMIASLGAPNLNVTFNKKNPPEGKRK 859
P + G A L A + LG P + + PP
Sbjct: 573 EGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGP 632
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSS-GSKASGPPNPPAQGD 914
+ G G GS PG T P G PG GP G + G + P
Sbjct: 633 IGVPGPAGPK--GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK 690
Query: 915 GTSLSPNYTLESTSGNDGKPVSG 937
G +P G DG PV G
Sbjct: 691 GDQGAPGLDAPCPLGEDGLPVQG 713
Score = 35.8 bits (81), Expect = 0.28
Identities = 92/355 (25%), Positives = 121/355 (34%), Gaps = 45/355 (12%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-VHGFFG--GQQPHH 99
GPPGP P+ LG P + G M P G G + P + G+ G G++
Sbjct: 273 GPPGPPGPS-GPLGHPGLPGP-MGPPGLPG-------PPGPKGDPGIQGYHGRKGERGMP 323
Query: 100 GHPGSHHPHQHHPHFG--GNFGGPD-PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG H + P G G P PG G G G G LG + + +
Sbjct: 324 GMPGKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAE--GSPGLPGLLGQKGEKGDAGNSI 380
Query: 157 AESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHS 216
+G E P PG +G P P P D+ AA G GS
Sbjct: 381 GGGRG-EPGPPGLPGPPGPKGEAGVDGQVGP-PGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 217 LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHYAAGRQVPGGAFPGASA 275
+ V G ++ A G P GQ+ P A G +PG G
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMG------PPGLPGQIGPPGAPG--IPGQK--GEIG 488
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF---SGARKMPVGLEPSVG 332
+P G G +P P Q P + GV E S K G G
Sbjct: 489 LPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAG 548
Query: 333 SRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAG 387
S + ++ P + P P + PP PPGL +P P +GEAG
Sbjct: 549 SPGEKGEAGEKGNPGAEV--PGLPGPEGPPGPPGL--------QGVPGP-KGEAG 592
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 90.9 bits (224), Expect = 7e-18
Identities = 137/503 (27%), Positives = 182/503 (36%), Gaps = 99/503 (19%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG PA P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAP 1145
GHPG+PG + + T +G+P
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSP 550
Score = 59.7 bits (143), Expect = 2e-08
Identities = 143/553 (25%), Positives = 176/553 (31%), Gaps = 87/553 (15%)
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCG-PHDPSLA---PPPPPGGSGVL----FRGP--LQ 681
F GP PG LP G G+P G P D L+ P PPG G F GP L
Sbjct: 123 FQGPTGRPG--LPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD 180
Query: 682 EPMRMPGEGHVPALPSPGLQFG--GSLGGLGQ---------LQSPGAGVG---------L 721
PG L P Q G G G GQ L S A + L
Sbjct: 181 GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL 240
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P S R PPP G+ Q++ PG PP G G G G
Sbjct: 241 PLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPSGPLGHPGLPGP 292
Query: 782 GGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G PP P P + + G + G K +K A A M
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK---------GAPGIAVAGMK 343
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGT 896
G P + P L Q G A G PG PG PGP GP G
Sbjct: 344 GEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PPGLPGPPGPKGE 401
Query: 897 SSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPG 956
+ + GPP P + + G+ G+P G+G +G+++
Sbjct: 402 AGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGEMVDYNGNINEA 453
Query: 957 TFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAEL 1016
+ A G PG+ PGQ GA GE G P P KG
Sbjct: 454 LQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI-GLPGP-----PGHDGEKGPRG 503
Query: 1017 LLGDQ----PDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALV 1070
GD P DG G K ++ P ++ T A S + +A
Sbjct: 504 KPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQA-----GSPGEKGEAGE 558
Query: 1071 KASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTP 1130
K +P G +P AG G K G P + G G PG PGTP
Sbjct: 559 KG--NPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 616
Query: 1131 GLEQVRTPTSSSG 1143
G V P G
Sbjct: 617 GPIGVPGPAGPKG 629
Score = 59.7 bits (143), Expect = 2e-08
Identities = 99/374 (26%), Positives = 124/374 (33%), Gaps = 36/374 (9%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFER--EGGSTGAGR--LGTFEQQAPHLAQESAWFSG 634
G PG G+ G + GL E+ G S G GR G P + A G
Sbjct: 347 GIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDG 406
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG P G G + GP P + P G V + G + E ++ E A
Sbjct: 407 QVGPPGQ--PGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ---EIRTLA 461
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQPGFPFGAAG 752
L P G GQ+ PGA G+P E P P G G+PG G G
Sbjct: 462 LMGPP-------GLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDGEKGPRGKPG-DMGPPG 512
Query: 753 RQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLG---ALSLG 808
P PG + PP G G G G G P ++ A + G A L
Sbjct: 513 ----PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568
Query: 809 SFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGA 868
P + L G + LG P + + PP + G
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDR-GPLGLPGASGLDGRPGPPGTPGPIGVPGPAGP 627
Query: 869 AVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSS-GSKASGPPNPPAQGDGTSLSPNYT 923
G GS PG T P G PG GP G + G + P G +P
Sbjct: 628 K--GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLD 685
Query: 924 LESTSGNDGKPVSG 937
G DG PV G
Sbjct: 686 APCPLGEDGLPVQG 699
Score = 35.4 bits (80), Expect = 0.36
Identities = 89/388 (22%), Positives = 122/388 (31%), Gaps = 61/388 (15%)
Query: 43 GPPGPV-DPAMSAL-GEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHG 100
GPPGP DP + G GM P A+G + G++ +P G++ G
Sbjct: 300 GPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEG 359
Query: 101 HPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHMAESQ 160
PG P G G + + GGR G G G G PP +G +
Sbjct: 360 SPGL-------PGLLGQKGEKGDAGNSIGGGR--GEPGPPGLPG--PPGPKGEAGVDGQV 408
Query: 161 GPESFGPQRPGNLPDFHSSGAS-------SHAVPAPCLPLDQSPN--------RAASFHG 205
GP P +PG+ + ++G S P +D + N R + G
Sbjct: 409 GP----PGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMG 464
Query: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL----PHYAA 261
P G P +G E PG P GH P G + P
Sbjct: 465 PPGLPGQIGPPGAPGIPGQKG-----EIGLPG--PPGHDGEKGPRGKPGDMGPPGPQGPP 517
Query: 262 GRQVPGGA-----FPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFER 316
G+ P G PG+ G G + + + + + Q G E
Sbjct: 518 GKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEA 577
Query: 317 FSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPP 376
K G + G R PL P P P P PG P
Sbjct: 578 GLDGAKGEKGFQGEKGDRGPLGLPGASG----LDGRPGPPGTPGPIGVPG---------P 624
Query: 377 ALPRPQQGEAGTPSGGLQDGGPMLPSQH 404
A P+ ++G G P G LP H
Sbjct: 625 AGPKGERGSKGDPGMTGPTGAAGLPGLH 652
>gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]
Length = 717
Score = 90.9 bits (224), Expect = 7e-18
Identities = 137/503 (27%), Positives = 182/503 (36%), Gaps = 99/503 (19%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG PA P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAP 1145
GHPG+PG + + T +G+P
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSP 550
Score = 62.4 bits (150), Expect = 3e-09
Identities = 148/563 (26%), Positives = 179/563 (31%), Gaps = 93/563 (16%)
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCG-PHDPSLA---PPPPPGGSGVL----FRGP--LQ 681
F GP PG LP G G+P G P D L+ P PPG G F GP L
Sbjct: 123 FQGPTGRPG--LPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD 180
Query: 682 EPMRMPGEGHVPALPSPGLQFG--GSLGGLGQ---------LQSPGAGVG---------L 721
PG L P Q G G G GQ L S A + L
Sbjct: 181 GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL 240
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P S R PPP G+ Q++ PG PP G G G G
Sbjct: 241 PLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPSGPLGHPGLPGP 292
Query: 782 GGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G PP P P + + G + G K +K A A M
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK---------GAPGIAVAGMK 343
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGT 896
G P + P L Q G A G PG PG PGP GP G
Sbjct: 344 GEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PPGLPGPPGPKGE 401
Query: 897 SSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPG 956
+ + GPP P + + G+ G+P G+G +G+++
Sbjct: 402 AGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGEMVDYNGNINEA 453
Query: 957 TFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAEL 1016
+ A G PG+ PGQ GA GE G P P KG
Sbjct: 454 LQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI-GLPGP-----PGHDGEKGPRG 503
Query: 1017 LLGDQ----PDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYAN---EDEVSSSSDNPQ 1067
GD P DG G K ++ P ++ T A E + NP
Sbjct: 504 KPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPG 563
Query: 1068 ALVKASRSPLVTGSPKLP-------PRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGG 1120
A V P G P P P+G AG G K G P + G
Sbjct: 564 AEVPGLPGP--EGPPGPPGLQGVPGPKGE-AGLDGAKGEKGFQGEKGDRGPLGLPGASGL 620
Query: 1121 GGGPGHPGTPGLEQVRTPTSSSG 1143
G PG PGTPG V P G
Sbjct: 621 DGRPGPPGTPGPIGVPGPAGPKG 643
Score = 57.4 bits (137), Expect = 9e-08
Identities = 129/530 (24%), Positives = 167/530 (31%), Gaps = 88/530 (16%)
Query: 492 PGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
PG PG P D +GPP Q P P Q Q+ ++ Q + ++ R
Sbjct: 183 PGHPG----PKGDMGLTGPPGQ-PGP-------QGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 552 QNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG 611
+ + +K + N + P + + G+ Q + GP G P G S
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQ--GPPGPPGPP-----GPSGP 283
Query: 612 AGRLGTFEQQAPHLAQESAWFSGPHPPPGDL----LPRRMGGSGLPADCGPHDPSLAPPP 667
G G P GP P GD R G G+P G H AP
Sbjct: 284 LGHPGLPGPMGP------PGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAP-- 335
Query: 668 PPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE 727
G+ G EP +G A SPGL G LG G+ G +G
Sbjct: 336 -----GIAVAGMKGEPGIPGTKGEKGAEGSPGLP--GLLGQKGEKGDAGNSIG----GGR 384
Query: 728 RRPPPPDFATSALGGQPGFPFGAAG--RQSTPHSGPGVNSPPSAGGGGGSSGGGGGGG-- 783
P PP L G PG P G AG Q P PG A G G G G G
Sbjct: 385 GEPGPP-----GLPGPPG-PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 784 AYPPQPDFQPSQRTSASKLGALSL-------GSFNKPSSKDNLFGQSCLAAL-------- 828
D+ + + ++ L+L G P + + GQ L
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDG 497
Query: 829 STACQNMIASLGAPNLNVTFNKKNPPEGK----------RKLSQNETDGAAVAGNPGS-- 876
+ +G P K PP K K + ET A G G
Sbjct: 498 EKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG 557
Query: 877 -DYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPV 935
PG PG PGP GP G G P P + + G+ G P+
Sbjct: 558 EKGNPGAEVPGLPGPEGPPGPPG----LQGVPGPKGEAGLDGAKGEKGFQGEKGDRG-PL 612
Query: 936 SGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAA 985
G G R G +PG A P PG +GAA
Sbjct: 613 GLPGASGLDGRPGPPG--TPGPIGVPGPAGPKGERGSKGDPGMTGPTGAA 660
Score = 55.5 bits (132), Expect = 3e-07
Identities = 100/383 (26%), Positives = 125/383 (32%), Gaps = 40/383 (10%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFER--EGGSTGAGR--LGTFEQQAPHLAQESAWFSG 634
G PG G+ G + GL E+ G S G GR G P + A G
Sbjct: 347 GIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDG 406
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG P G G + GP P + P G V + G + E ++ E A
Sbjct: 407 QVGPPGQ--PGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ---EIRTLA 461
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQPGFPFGAAG 752
L P G GQ+ PGA G+P E P P G G+PG G G
Sbjct: 462 LMGPP-------GLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDGEKGPRGKPG-DMGPPG 512
Query: 753 RQSTP-HSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
Q P GP G N P + G G G G G+ + + A G
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGP 572
Query: 808 GSFNKPSSKDNLFGQSCLAALSTAC--------QNMIASLGAPNLNVTFNKKNPPEGKRK 859
P + G A L A + LG P + + PP
Sbjct: 573 EGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGP 632
Query: 860 LSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSS-GSKASGPPNPPAQGD 914
+ G G GS PG T P G PG GP G + G + P
Sbjct: 633 IGVPGPAGPK--GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK 690
Query: 915 GTSLSPNYTLESTSGNDGKPVSG 937
G +P G DG PV G
Sbjct: 691 GDQGAPGLDAPCPLGEDGLPVQG 713
Score = 35.8 bits (81), Expect = 0.28
Identities = 92/355 (25%), Positives = 121/355 (34%), Gaps = 45/355 (12%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-VHGFFG--GQQPHH 99
GPPGP P+ LG P + G M P G G + P + G+ G G++
Sbjct: 273 GPPGPPGPS-GPLGHPGLPGP-MGPPGLPG-------PPGPKGDPGIQGYHGRKGERGMP 323
Query: 100 GHPGSHHPHQHHPHFG--GNFGGPD-PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG H + P G G P PG G G G G LG + + +
Sbjct: 324 GMPGKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAE--GSPGLPGLLGQKGEKGDAGNSI 380
Query: 157 AESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHS 216
+G E P PG +G P P P D+ AA G GS
Sbjct: 381 GGGRG-EPGPPGLPGPPGPKGEAGVDGQVGP-PGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 217 LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHYAAGRQVPGGAFPGASA 275
+ V G ++ A G P GQ+ P A G +PG G
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMG------PPGLPGQIGPPGAPG--IPGQK--GEIG 488
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF---SGARKMPVGLEPSVG 332
+P G G +P P Q P + GV E S K G G
Sbjct: 489 LPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAG 548
Query: 333 SRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAG 387
S + ++ P + P P + PP PPGL +P P +GEAG
Sbjct: 549 SPGEKGEAGEKGNPGAEV--PGLPGPEGPPGPPGL--------QGVPGP-KGEAG 592
>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
Length = 705
Score = 90.9 bits (224), Expect = 7e-18
Identities = 137/503 (27%), Positives = 182/503 (36%), Gaps = 99/503 (19%)
Query: 681 QEPMRMPGEGHVPALPSPGLQFG-----GSLGGLGQLQSPG-AGVGLPSAASERRPPPPD 734
+ P PG PA P + G G++G G++ SPG AG+ + R PP
Sbjct: 109 EAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGP----RGPPGQ 164
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSGP----GVNSPPSAGGGGGSSGGGGGGGAYPPQPD 790
T G PG P G G+ H GP G+ PP G G G G G YP +
Sbjct: 165 PGTRGFPGFPG-PIGLDGKPG--HPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHR-- 219
Query: 791 FQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQN--MIASLGAPNLNVTF 848
CL+++ A ++ +IA P LN +
Sbjct: 220 --------------------------------ECLSSMPAALRSSQIIALKLLPLLN-SV 246
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSSGSKAS 904
PP KR+ Q E A++ G PG PG + P G PGP GP G
Sbjct: 247 RLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLP------- 299
Query: 905 GPPNPPAQGDGTSLSPNYTLESTSGNDGKP----VSGGGGRGRGRRKRDSGHVSPGTFFD 960
GPP P +GD + + + G G P G G K + G PGT +
Sbjct: 300 GPPGP--KGD-PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG--IPGTKGE 354
Query: 961 KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
K A S G PG+ GQ+ G A G+S G RG P P L P KG + G
Sbjct: 355 K--GAEGSPGLPGLL-GQKGEKGDA--GNSIGGGRGEPGP--PGLPGPPGPKGEAGVDGQ 407
Query: 1021 -----QPDLIGSLDG-------GAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
QP G G K P GE + + A ++ + + P
Sbjct: 408 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPG 467
Query: 1069 LVKASRSPLVTGSPK------LPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGG 1122
L P G P LP GE GP+ P +G G G
Sbjct: 468 LPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG 527
Query: 1123 GPGHPGTPGLEQVRTPTSSSGAP 1145
GHPG+PG + + T +G+P
Sbjct: 528 ENGHPGSPGEKGEKGETGQAGSP 550
Score = 58.5 bits (140), Expect = 4e-08
Identities = 148/576 (25%), Positives = 182/576 (31%), Gaps = 109/576 (18%)
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCG-PHDPSLA---PPPPPGGSGVL----FRGP--LQ 681
F GP PG LP G G+P G P D L+ P PPG G F GP L
Sbjct: 123 FQGPTGRPG--LPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD 180
Query: 682 EPMRMPGEGHVPALPSPGLQFG--GSLGGLGQ---------LQSPGAGVG---------L 721
PG L P Q G G G GQ L S A + L
Sbjct: 181 GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL 240
Query: 722 PSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGG 781
P S R PPP G+ Q++ PG PP G G G G
Sbjct: 241 PLLNSVRLAPPPVIKRRTFQGEQS--------QASIQGPPGPPGPPGPSGPLGHPGLPGP 292
Query: 782 GGAY----PPQPDFQPSQRTSASKLGALSL-GSFNKPSSKDNLFGQSCLAALSTACQNMI 836
G PP P P + + G + G K +K A A M
Sbjct: 293 MGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK---------GAPGIAVAGMK 343
Query: 837 ASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGT 896
G P + P L Q G A G PG PG PGP GP G
Sbjct: 344 GEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPG--PPGLPGPPGPKGE 401
Query: 897 SSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPG 956
+ + GPP P + + G+ G+P G+G +G+++
Sbjct: 402 AGVDGQV-GPPGQPGDKGERGAAGEQGPDGPKGSKGEP-------GKGEMVDYNGNINEA 453
Query: 957 TFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAEL 1016
+ A G PG+ PGQ GA GE G P P KG
Sbjct: 454 LQEIRTLALM---GPPGL-PGQIGPPGAPGIPGQKGEI-GLPGP-----PGHDGEKGPRG 503
Query: 1017 LLGDQ----PDLIGSLDG--GAKSDSSSPNVGEFASDEVSTSYAN---EDEVSSSSDNPQ 1067
GD P DG G K ++ P ++ T A E + NP
Sbjct: 504 KPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPG 563
Query: 1068 ALVKASRSPLVTGSPKLP-------PRGVGA-----------GEHGPKAPPPALGLGIMS 1109
A V P G P P P+G GE G + P LGL
Sbjct: 564 AEVPGLPGP--EGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGP---LGLPGTP 618
Query: 1110 NSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
P G G G G PG+ PT ++G P
Sbjct: 619 GPIGVPGPAGPKGERGSKGDPGM---TGPTGAAGLP 651
Score = 54.7 bits (130), Expect = 6e-07
Identities = 136/557 (24%), Positives = 178/557 (31%), Gaps = 105/557 (18%)
Query: 492 PGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
PG PG P D +GPP Q P P Q Q+ ++ Q + ++ R
Sbjct: 183 PGHPG----PKGDMGLTGPPGQ-PGP-------QGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 552 QNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG 611
+ + +K + N + P + + G+ Q + GP G P G S
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQ--GPPGPPGPP-----GPSGP 283
Query: 612 AGRLGTFEQQAPHLAQESAWFSGPHPPPGDL----LPRRMGGSGLPADCGPHDPSLAPPP 667
G G P GP P GD R G G+P G H AP
Sbjct: 284 LGHPGLPGPMGP------PGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAP-- 335
Query: 668 PPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE 727
G+ G EP +G A SPGL G LG G+ G +G
Sbjct: 336 -----GIAVAGMKGEPGIPGTKGEKGAEGSPGLP--GLLGQKGEKGDAGNSIG----GGR 384
Query: 728 RRPPPPDFATSALGGQPGFPFGAAG--RQSTPHSGPGVNSPPSAGGGGGSSGGGGGGG-- 783
P PP L G PG P G AG Q P PG A G G G G G
Sbjct: 385 GEPGPP-----GLPGPPG-PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 784 AYPPQPDFQPSQRTSASKLGALSL-------GSFNKPSSKDNLFGQSCLAAL-------- 828
D+ + + ++ L+L G P + + GQ L
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDG 497
Query: 829 STACQNMIASLGAPNLNVTFNKKNPPEGK----------RKLSQNETDGAAVAGNPGS-- 876
+ +G P K PP K K + ET A G G
Sbjct: 498 EKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG 557
Query: 877 -DYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQG--DGTSLSPNYT---------- 923
PG PG PGP GP G G P P + DG +
Sbjct: 558 EKGNPGAEVPGLPGPEGPPGPPG----LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLG 613
Query: 924 LESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPG--VSPGQQQA 981
L T G G P G +G K D G P + P G PG + G++
Sbjct: 614 LPGTPGPIGVP-GPAGPKGERGSKGDPGMTGP----TGAAGLPGLHGPPGDKGNRGERGK 668
Query: 982 SGAAVGGSSAGETRGAP 998
G+ G+ +GAP
Sbjct: 669 KGSRGPKGDKGD-QGAP 684
Score = 52.0 bits (123), Expect = 4e-06
Identities = 101/381 (26%), Positives = 126/381 (33%), Gaps = 48/381 (12%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFER--EGGSTGAGR--LGTFEQQAPHLAQESAWFSG 634
G PG G+ G + GL E+ G S G GR G P + A G
Sbjct: 347 GIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDG 406
Query: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPA 694
PPG P G G + GP P + P G V + G + E ++ E A
Sbjct: 407 QVGPPGQ--PGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQ---EIRTLA 461
Query: 695 LPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG--GQPGFPFGAAG 752
L P G GQ+ PGA G+P E P P G G+PG G G
Sbjct: 462 LMGPP-------GLPGQIGPPGAP-GIPGQKGEIGLPGPPGHDGEKGPRGKPG-DMGPPG 512
Query: 753 RQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFN 811
P PG + PP G G G G G P ++ A + G N
Sbjct: 513 ----PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKG-------N 561
Query: 812 KPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKN--PPEGKR-KLSQNETDG- 867
+ L G Q + G L+ +K +G R L T G
Sbjct: 562 PGAEVPGLPGPEGPPG-PPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGP 620
Query: 868 ------AAVAGNPGSDYFPGGTAP----GAPGPGGPSGTSSS-GSKASGPPNPPAQGDGT 916
A G GS PG T P G PG GP G + G + P G
Sbjct: 621 IGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGD 680
Query: 917 SLSPNYTLESTSGNDGKPVSG 937
+P G DG PV G
Sbjct: 681 QGAPGLDAPCPLGEDGLPVQG 701
Score = 35.8 bits (81), Expect = 0.28
Identities = 92/355 (25%), Positives = 121/355 (34%), Gaps = 45/355 (12%)
Query: 43 GPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQP-VHGFFG--GQQPHH 99
GPPGP P+ LG P + G M P G G + P + G+ G G++
Sbjct: 273 GPPGPPGPS-GPLGHPGLPGP-MGPPGLPG-------PPGPKGDPGIQGYHGRKGERGMP 323
Query: 100 GHPGSHHPHQHHPHFG--GNFGGPD-PGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG H + P G G P PG G G G G LG + + +
Sbjct: 324 GMPGKHGA-KGAPGIAVAGMKGEPGIPGTKGEKGAE--GSPGLPGLLGQKGEKGDAGNSI 380
Query: 157 AESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGSDSHS 216
+G E P PG +G P P P D+ AA G GS
Sbjct: 381 GGGRG-EPGPPGLPGPPGPKGEAGVDGQVGP-PGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 217 LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQL-PHYAAGRQVPGGAFPGASA 275
+ V G ++ A G P GQ+ P A G +PG G
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMG------PPGLPGQIGPPGAPG--IPGQK--GEIG 488
Query: 276 MPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERF---SGARKMPVGLEPSVG 332
+P G G +P P Q P + GV E S K G G
Sbjct: 489 LPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAG 548
Query: 333 SRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAG 387
S + ++ P + P P + PP PPGL +P P +GEAG
Sbjct: 549 SPGEKGEAGEKGNPGAEV--PGLPGPEGPPGPPGL--------QGVPGP-KGEAG 592
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 90.5 bits (223), Expect = 1e-17
Identities = 168/637 (26%), Positives = 208/637 (32%), Gaps = 123/637 (19%)
Query: 579 GHPGDVGQGGL--------VHG-----GPVGGLAQPNFEREGGSTGA-------GRLGTF 618
G PG+ G+ GL V G G G L P + + G G G GT
Sbjct: 277 GRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTT 336
Query: 619 EQQAPHLAQESAWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFR 677
PH GP GD LP G G P + GP P+ PPG G
Sbjct: 337 SLFTPHPRMPGE--QGPKGEKGDPGLPGEPGLQGRPGELGPQGPT----GPPGAKGQEGA 390
Query: 678 GPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLGQLQSPGAGV--GLPSAASERRPPPPD 734
PG GHV A P P GS+G G +PG G AA E P P
Sbjct: 391 HGAPGAAGNPGAPGHVGA-PGPSGP-PGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGP- 447
Query: 735 FATSALGGQPGFPFGAAGRQSTPHSG----PGVNSP---------PSAGGGGGSSGGGGG 781
G PG P G G+ G PG+ P P G GS G G
Sbjct: 448 VGPRGDPGAPGLP-GPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGI 506
Query: 782 GGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGA 841
G A PP P P + S G P+ +D L + LS N++A
Sbjct: 507 GVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLS-----SLLSPGDINLLAK--- 558
Query: 842 PNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPG--GTA--PGAPGPGGPSGTS 897
+V + P G L + D V G PG + G G A PG PGP G +G
Sbjct: 559 ---DVCNDCPPGPPGLPGLPGFKGD-KGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQ 614
Query: 898 SS----------GSKAS-------------GPPNPPAQGDGTSLSPNYTLESTSGNDGKP 934
S G K G P PP + ++ + G +G P
Sbjct: 615 GSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPP 674
Query: 935 VSGG-----GGRGR-GRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGG 988
G G G G+ RD PG P G PG+ PG + A G
Sbjct: 675 GPQGPSGLPGIPGEEGKEGRDGKPGPPGE--------PGKAGEPGL-PGPEGARGPPGFK 725
Query: 989 SSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDE 1048
G++ GAP P G+ + L Q L G K + P +
Sbjct: 726 GHTGDS-GAPGPR---------GESGAMGLPGQEGLPG------KDGDTGPTGPQGPQGP 769
Query: 1049 VSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIM 1108
N S P S GSP LP G GP+ PP G +
Sbjct: 770 RGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLP------GFLGPRGPPGEPGEKGV 823
Query: 1109 SNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAP 1145
P G G G G PG++ + P G P
Sbjct: 824 PGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP 860
Score = 80.5 bits (197), Expect = 1e-14
Identities = 164/612 (26%), Positives = 195/612 (31%), Gaps = 155/612 (25%)
Query: 573 PNLAQL-GHPGDVGQGGLVHG----GPVG--GLA-QPNFEREGGSTGAGRLGTFEQQAPH 624
P L QL G PG+ G+ GL G +G GLA +P + E G GA P
Sbjct: 243 PGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGF-------PG 295
Query: 625 LAQESAWFSGPHPPPGDL-LPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEP 683
+ E G G+L LP G G + GP PP PG + + P
Sbjct: 296 VRGEK----GDQGEKGELGLPGLKGDRGEKGEAGP----AGPPGLPGTTSLFTPHPRMPG 347
Query: 684 MRMP-GEGHVPALPS-PGLQFG-GSLGGLGQLQSPGA-----GVGLPSAASERRPPPPDF 735
+ P GE P LP PGLQ G LG G PGA G P AA
Sbjct: 348 EQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAA---------- 397
Query: 736 ATSALGGQPGFP--FGAAGRQSTPHS--GPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF 791
G PG P GA G P S PG+ P G G G G G+ P P
Sbjct: 398 ------GNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGS--PGPVG 449
Query: 792 QPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKK 851
+ G G +P + G+P L K
Sbjct: 450 PRGDPGAPGLPGPPGKGKDGEPGLR-----------------------GSPGLPGPLGTK 486
Query: 852 NPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGP----P 907
+ + G+PGS PG G PGP GP G S P P
Sbjct: 487 G-----------DRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGP 535
Query: 908 NPPAQGDGTS--LSPN--YTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYS 963
PA DG S LSP L ND P G PG DK
Sbjct: 536 QGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPG------------LPGFKGDK-- 581
Query: 964 AAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPD 1023
G PG PG++ G GE P + P +G G+
Sbjct: 582 ------GVPG-KPGREGTEG------KKGEAGPPGLPGPPGIAGPQGSQGERGADGEV-- 626
Query: 1024 LIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSP- 1082
G K D P V F + D ++ A+ P + GSP
Sbjct: 627 -------GQKGDQGHPGVPGFMGPPGNPGPPGADGIAG----------AAGPPGIQGSPG 669
Query: 1083 -KLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTP--- 1138
+ PP G GP P G P G G G PG PG E R P
Sbjct: 670 KEGPP-----GPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGF 724
Query: 1139 ---TSSSGAPPP 1147
T SGAP P
Sbjct: 725 KGHTGDSGAPGP 736
Score = 74.3 bits (181), Expect = 7e-13
Identities = 156/624 (25%), Positives = 194/624 (31%), Gaps = 95/624 (15%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTG-------AGRLGTFEQQAPHLAQESAW 631
G PG VG G GP G + P G G AG G+ P +
Sbjct: 401 GAPGHVGAPG--PSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPG 458
Query: 632 FSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAP-----PPPPGGSGVLFRGPLQEPMRM 686
GP D P G GLP G AP P G G+ GP P
Sbjct: 459 LPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGP-PGPSGP 517
Query: 687 PGEGHVPA---LPS-PGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGG 742
PG+ P LP PG Q GL L SPG L PP P L G
Sbjct: 518 PGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPP----GLPG 573
Query: 743 QPGFPF-----GAAGRQSTPHSG-----PGVNSPPSAGGGGGSSGGGGGGG--------A 784
PGF G GR+ T PG+ PP G GS G G G
Sbjct: 574 LPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQG 633
Query: 785 YPPQPDFQ--------PSQRTSASKLGALSL-GSFNK--------PSSKDNLFGQSCLAA 827
+P P F P A G + GS K PS + G+
Sbjct: 634 HPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEG 693
Query: 828 LS--TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG----AAVAGNPGSDYFPG 881
G P L + PP K + G + G PG + PG
Sbjct: 694 RDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPG 753
Query: 882 GTAPGAP-GPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGG-- 938
P GP GP G K +G P P + G S +P + + G +G P G
Sbjct: 754 KDGDTGPTGPQGPQGPRGPPGK-NGSPGSPGE-PGPSGTPGQ--KGSKGENGSPGLPGFL 809
Query: 939 GGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVS-----PGQQQASGAAVGGSSAGE 993
G RG + G PG P G PG PG + G G G+
Sbjct: 810 GPRGPPGEPGEKG--VPGK-----EGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGD 862
Query: 994 TRGAPTPHEKALTSPSWGKGAELLLGD-----QPDLIGSLDGGAKSDSSSPNVGEFASDE 1048
L P G +G QP G ++ + E +
Sbjct: 863 PGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQ 922
Query: 1049 VSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIM 1108
+ T A + P A +K+S+ G P P + G GP P G G +
Sbjct: 923 LETRLAY-----LLAQMPPAYMKSSQGR--PGPPGPPGKDGLPGRAGPMGEPGRPGQGGL 975
Query: 1109 SNSTSTPDSYGGGGGPGHPGTPGL 1132
+ G G G PG PG+
Sbjct: 976 EGPSGPIGPKGERGAKGDPGAPGV 999
Score = 67.8 bits (164), Expect = 7e-11
Identities = 104/401 (25%), Positives = 134/401 (33%), Gaps = 82/401 (20%)
Query: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGA-------GRLGTFEQQAPHLAQESAW 631
G PG G+ GL GP G P F+ G +GA G +G Q+
Sbjct: 702 GEPGKAGEPGLP--GPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTG 759
Query: 632 FSGPHPPPGDLLPRRMGGS-GLPADCGPHDP-----SLAPPPPPGGSGVLF-RGPLQEPM 684
+GP P G P GS G P + GP S PG G L RGP EP
Sbjct: 760 PTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPG 819
Query: 685 R--MPGEGHVPALPS-PGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALG 741
+PG+ VP P PG + G+ + P G G P
Sbjct: 820 EKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP------------------- 860
Query: 742 GQPGFPFGAAGRQST--PHSGPGVNSPPSAGGGGGSSGGGGGGGAYPP--------QPDF 791
G PG P G G P PG N P G G G G G P Q +
Sbjct: 861 GDPGIP-GHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEEL 919
Query: 792 QPSQRTSASKLGALSLGSFNK----------PSSKDNLFGQSCLAALSTACQNMIASLGA 841
T + L A ++ K P KD L G++ + G
Sbjct: 920 GKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRA----------GPMGEPGR 969
Query: 842 PNLNVTFNKKNP--PEGKRKLS----------QNETDGAAVAGNPGSDYFPGGTAPGAPG 889
P P P+G+R + E + G PG + PG PG
Sbjct: 970 PGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPG 1029
Query: 890 PGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGN 930
P G +G + GPP PP Q D + + +L + GN
Sbjct: 1030 PQGETGPAGHPG-LPGPPGPPGQCDPSQCAYFASLAARPGN 1069
Score = 58.5 bits (140), Expect = 4e-08
Identities = 164/704 (23%), Positives = 228/704 (32%), Gaps = 149/704 (21%)
Query: 43 GPPGPV----DPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFG--GQQ 96
G PGPV DP L PP G + EP GL+ P G G G +
Sbjct: 443 GSPGPVGPRGDPGAPGLPGPPGKGKDGEP--------------GLRGSP--GLPGPLGTK 486
Query: 97 PHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLGSQPPFAEGYEHM 156
G PG P G+ G DPG +G G G G PP +G
Sbjct: 487 GDRGAPGI-------PGSPGSRG--DPG---------IGVAGPPGPSG--PPGDKG---S 523
Query: 157 AESQGPESF-GPQRPGN---LPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSGS 212
S+G F GPQ P L S G + C + P GLP G
Sbjct: 524 PGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVC---NDCPPGPPGLPGLPGFKGD 580
Query: 213 DSHSLEPRRVTNQGAVDSLEYNYPG-EAPSGHFDMFSPSDSEGQ---------------- 255
+P R +G E PG P G + P S+G+
Sbjct: 581 KGVPGKPGREGTEGKKG--EAGPPGLPGPPG---IAGPQGSQGERGADGEVGQKGDQGHP 635
Query: 256 -LPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFF 314
+P + PG PGA + AAG G+ P ++ P Q P G
Sbjct: 636 GVPGFMGPPGNPGP--PGADGIAGAAGPPGIQ---GSPGKEGPPGPQGPSGLPGIPGEEG 690
Query: 315 ERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQ----------PPQQPPQQQPPPP 364
+ + P G G P + P+ A PP + P + P
Sbjct: 691 KEGRDGKPGPPGEPGKAGE--PGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQ 748
Query: 365 PGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSE 424
GL + P P+ QG G P ++G P P + P +
Sbjct: 749 EGLPGKDGDTGPTGPQGPQGPRGPPG---KNGSPGSPGEPGPSGTPGQKGSKGENGSPGL 805
Query: 425 PVFSMQHPPPQQAPNQRL---QHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGA 481
P F PP + + + + P K R D PG G G +
Sbjct: 806 PGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGD-PGIKGDKGPPGGKGQPGDPG 864
Query: 482 LDNH------LSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQ 535
+ H + P PG G PP P P P L+ +P ++L++ Q++ +Q +
Sbjct: 865 IPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLE 924
Query: 536 QQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPV 595
+ A ++ QM + +P G PG G+ GL G
Sbjct: 925 TR----------------LAYLLAQMPPAYMKSSQGRP-----GPPGPPGKDGL--PGRA 961
Query: 596 GGLAQPNFEREGGSTG-AGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPA 654
G + +P +GG G +G +G ++ G PG L MG G+P
Sbjct: 962 GPMGEPGRPGQGGLEGPSGPIGPKGERGA---------KGDPGAPGVGLRGEMGPPGIPG 1012
Query: 655 DCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSP 698
P +P A PG G P G P LP P
Sbjct: 1013 Q--PGEPGYAKDGLPGIPG---------PQGETGPAGHPGLPGP 1045
Score = 50.8 bits (120), Expect = 8e-06
Identities = 133/550 (24%), Positives = 178/550 (32%), Gaps = 83/550 (15%)
Query: 626 AQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPP------PGGSGVLF--- 676
++ES GP P + + + G+ CG + S+ P P G+G F
Sbjct: 164 SRESLDLLGPRTDPWENVDQGAQGA-----CGRGNTSVLPSSVAPQCSMPKGTGHEFSAA 218
Query: 677 ---RGPLQEPMRMPGEGHVPALPSPGL-QFGGSLGGLGQLQSPGAGVGLPSAASER--RP 730
+GP + + A +PGL Q G G G+ PG GL E+
Sbjct: 219 LGTQGPADQRADARASCILAAKTAPGLKQLNGEPGERGEDGLPGKP-GLRGEIGEQGLAG 277
Query: 731 PPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAGGGG--GSSGGGGGGGAYPPQ 788
P + + L G PGFP G G + + P G G G +G G G
Sbjct: 278 RPGEKGEAGLPGAPGFP-GVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTT 336
Query: 789 PDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTF 848
F P R + G P Q LG
Sbjct: 337 SLFTPHPRMPGEQGPKGEKGDPGLPGEP--------------GLQGRPGELGPQG----- 377
Query: 849 NKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPN 908
PP K + + GAA GNPG+ PG GAPGP GP G+ + P
Sbjct: 378 -PTGPPGAKGQEGAHGAPGAA--GNPGA---PGHV--GAPGPSGPPGSVGAPGLRGTPGK 429
Query: 909 PPAQGD----GTSLSPNYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVSPGTFFDKY 962
+G+ G SP G G P + G G G+G+ SPG
Sbjct: 430 DGERGEKGAAGEEGSPGPV-----GPRGDPGAPGLPGPPGKGKDGEPGLRGSPG--LPGP 482
Query: 963 SAAPDSGGAPGV--SPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020
GAPG+ SPG + G V G P P + P KG+ G
Sbjct: 483 LGTKGDRGAPGIPGSPGSRGDPGIGVAGP--------PGP-----SGPPGDKGSPGSRG- 528
Query: 1021 QPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTG 1080
P G G A D S + + ++ N+ K + V G
Sbjct: 529 LPGFPGP-QGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKG--VPG 585
Query: 1081 SPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTS 1140
P GE GP P G+ S + G G G G PG+ P
Sbjct: 586 KPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPG 645
Query: 1141 SSGAPPPDEI 1150
+ G P D I
Sbjct: 646 NPGPPGADGI 655
Score = 37.0 bits (84), Expect = 0.13
Identities = 72/272 (26%), Positives = 91/272 (33%), Gaps = 52/272 (19%)
Query: 135 GYGGAAGGLGSQPPFAE-GYEHMAESQGPES-FGPQRPGNLPDFHSSGASSHAVPAPCLP 192
G+ G G G Q E G + +G + GP P LP G +S P P +P
Sbjct: 292 GFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLP-----GTTSLFTPHPRMP 346
Query: 193 LDQSPNRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDS 252
+Q P GLP G PGE P
Sbjct: 347 GEQGPKGEKGDPGLPGEPGLQGR--------------------PGE--------LGPQGP 378
Query: 253 EGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGV 312
G P A G++ GA PGA+ P A G VG A P P P + G
Sbjct: 379 TG--PPGAKGQEGAHGA-PGAAGNPGAPGHVG-----APGPSGPPGSVGAPGLR----GT 426
Query: 313 FFERFSGARKMPVGLEPSVGSRHPLMQPPQQA-PPPPQQQPPQQPPQQQPPPPPGLL-VR 370
+ K G E S G P P P PP + +P + P PG L +
Sbjct: 427 PGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTK 486
Query: 371 QNSCPPALPRPQQGEAGTPSGGLQDGGPMLPS 402
+ P +P G G P G+ GP PS
Sbjct: 487 GDRGAPGIP-GSPGSRGDP--GIGVAGPPGPS 515
Score = 36.6 bits (83), Expect = 0.16
Identities = 81/347 (23%), Positives = 114/347 (32%), Gaps = 26/347 (7%)
Query: 862 QNETDGAAVA-GNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSP 920
+N GA A G + P AP P G S+ GP + A + +
Sbjct: 179 ENVDQGAQGACGRGNTSVLPSSVAPQCSMPKGTGHEFSAALGTQGPADQRADARASCILA 238
Query: 921 NYTLESTSGNDGKPVSGG--GGRGRGRRKRDSGHVS-PGTFFDKYSAA-PDSGGAPGV-- 974
T +G+P G G G+ + + G G +K A P + G PGV
Sbjct: 239 AKTAPGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRG 298
Query: 975 SPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKS 1034
G Q G +G RG E P G L P + G + G K
Sbjct: 299 EKGDQGEKGE-LGLPGLKGDRGEKG--EAGPAGPPGLPGTTSLFTPHPRMPG--EQGPKG 353
Query: 1035 DSSSPNV-GEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGE 1093
+ P + GE + Q A +P G+P P G
Sbjct: 354 EKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQE--GAHGAPGAAGNPGAPGH---VGA 408
Query: 1094 HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPL 1153
GP PP ++G + + G G G G+PG R + G P P P
Sbjct: 409 PGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGP----PG 464
Query: 1154 EILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVGASGAQNGDSELG 1200
+ + L+ S PLG K G +G + S GD +G
Sbjct: 465 KGKDGEPGLRG---SPGLPGPLGTK-GDRGAPGIPGSPGSRGDPGIG 507
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 89.0 bits (219), Expect = 3e-17
Identities = 150/556 (26%), Positives = 190/556 (34%), Gaps = 95/556 (17%)
Query: 57 EPPILGMNMEPYGFHARGHSELHAGG----LQAQPVHGFFGGQQPHHGHP--GSHHPHQH 110
EPP M P G H +L+ GG L P+ GG G P G HP
Sbjct: 199 EPPTSRMFQAPPGAPPP-HPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257
Query: 111 HPHF--------------------GGNFGGPDPGASCLH---------GGRLLGYGGAAG 141
P GGN P A+ H R L A+
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 142 -GLGSQP-PFAEGYEH-MAESQGPESFGPQR-PGNLPDFHSSGASSHAVPAPCLPLDQSP 197
GLG+QP P H M + G GP++ P P HS +S + PAP + S
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSS 377
Query: 198 NRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYP-------GEAPSGHFDMFSPS 250
+ ++S SSS S S S P + A+ S +++P P + PS
Sbjct: 378 SSSSSA-AASSSSSSSSSSASPFPASQ--ALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 251 D---SEGQLPHYAAGRQV------PGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQ 301
S+G P GR + PG P A A V H Q QQQ QQQQ
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQ 494
Query: 302 QPQQQQQQH---------GVF---FERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQ 349
Q QQQQQQH G F E S P + PS+GS P P PPP
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHS 554
Query: 350 QQPPQQPPQQQPPPPPGL----LVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHA 405
Q Q PP Q S P + P P QG G P P +P+
Sbjct: 555 QVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF-----PPVPTVTT 609
Query: 406 QFEYPIHRLENRSMHPYSEPVFSMQHPPP--QQAPNQRLQHFDAPPYMNVAKRPRFDF-- 461
+ + P S PPP ++AP+ PP P F
Sbjct: 610 SSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGT 669
Query: 462 -PGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQ 520
PG G A G+ G SP+ PG P P PS PP
Sbjct: 670 PPGYRGTSPPAG-PGTFKPG------SPTVGPG---PLPPAGPSGLPSLPPPPAAPASGP 719
Query: 521 SLQQQQQQQQQQQQQQ 536
L Q +Q+ ++ +
Sbjct: 720 PLSATQIKQEPAEEYE 735
Score = 73.2 bits (178), Expect = 2e-12
Identities = 163/672 (24%), Positives = 220/672 (32%), Gaps = 137/672 (20%)
Query: 154 EHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA-ASFHGLPSSSGS 212
E+ ++S S GP RP + P P+P P D +P + ASF PS + +
Sbjct: 142 ENDSDSSSGLSQGPARPYHPPPLFP--------PSP-QPPDSTPRQPEASFEPHPSVTPT 192
Query: 213 DSHS-LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFP 271
H+ +EP S + P AP H ++ P + G L G +
Sbjct: 193 GYHAPMEPPT--------SRMFQAPPGAPPPHPQLY-PGGTGGVLSGPPMGPK------- 236
Query: 272 GASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSV 331
G A G G K H PP P V SGA P
Sbjct: 237 GGGAASSVGGPNG-GKQH--PPPTTPIS------------VSSSGASGAPPTKPPTTPVG 281
Query: 332 GSRHPLMQPPQQAP------PPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQ--- 382
G P PP P PPP P +P PPGL + P LP P
Sbjct: 282 GGNLPSAPPPANFPHVTPNLPPP---PALRPLNNASASPPGLGAQP--LPGHLPSPHAMG 336
Query: 383 QGEAGTPSGGLQDGGPMLPSQHA-------------QFEYPIHRLENRSMHPYSEPVFSM 429
QG G P G + G + PS H+ +F Y + + S S
Sbjct: 337 QGMGGLPPGP-EKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Query: 430 QHP-PPQQAPNQRLQHFDAPPYMNVAKRP-RFDFPGSAGVDRCASWNGSMHNGALDNHLS 487
P P QA F P ++V+ +P ++ P + A W+ L
Sbjct: 396 ASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPS---LPSQAVWSQGPPPPPPYGRLL 452
Query: 488 PSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQ 547
++ PG F P + PP+ HQ QQQQQQQQQQQQQQQQ
Sbjct: 453 ANSNAH-PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP 511
Query: 548 QQQRQNAALMIKQMASRNQQQRLRQPNLAQL-------GH-PGDVGQGGLVHGGPVGGLA 599
+ ++ +S + P+L L H P Q GP G
Sbjct: 512 PGAFPHP---LEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG--- 565
Query: 600 QPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPH 659
P S+ + G++ P +Q P PP + S + A
Sbjct: 566 -PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624
Query: 660 DPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGV 719
PP GP R P G PG + PG+
Sbjct: 625 PAGYKTASPP--------GPPPYGKRAPSPGAYKTATPPGYK-------------PGS-- 661
Query: 720 GLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSP--PSAGGGGGSSG 777
PP F T G PG+ R ++P +GPG P P+ G G
Sbjct: 662 ------------PPSFRT---GTPPGY------RGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 778 GGGGGGAYPPQP 789
G G + PP P
Sbjct: 701 GPSGLPSLPPPP 712
Score = 64.7 bits (156), Expect = 6e-10
Identities = 132/565 (23%), Positives = 185/565 (32%), Gaps = 84/565 (14%)
Query: 635 PHPPPGDLLPRRMGGSGLP----ADCGPHDPSLAP-----------PPP-----PGGSGV 674
P P P D PR+ S P G H P P PPP PGG+G
Sbjct: 167 PSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGG 226
Query: 675 LFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPD 734
+ GP PM G G ++ GG GG Q P + + S+ + PP
Sbjct: 227 VLSGP---PMGPKGGGAASSV-------GGPNGGK-QHPPPTTPISVSSSGASGAPPTKP 275
Query: 735 FATSALGGQ-PGFPFGAAGRQSTPH---------------SGPGVNSPPSAGGGGGSSGG 778
T GG P P A TP+ S PG+ + P G
Sbjct: 276 PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAM 335
Query: 779 GGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP-------SSKDNLFGQSCLAALSTA 831
G G G PP P+ P+ S L S + P SS + S ++ S++
Sbjct: 336 GQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Query: 832 CQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPG 891
AS P+ +F PP +S N+ P + G P P
Sbjct: 396 ASPFPASQALPSYPHSF----PPPTSLSVS-NQPPKYTQPSLPSQAVWSQG-----PPPP 445
Query: 892 GPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKR--- 948
P G + S A P PP+ G ++ P + + + + ++++
Sbjct: 446 PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHG 505
Query: 949 DSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSP 1008
+SG PG F + G + P S ++ G P PH + S
Sbjct: 506 NSGPPPPGAF----PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAH-LPPPHSQVSYSQ 560
Query: 1009 SWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
+ G + S G SP+ G + S++ A
Sbjct: 561 AGPNGPPVSSSSNSSSSTS-QGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIA 619
Query: 1069 LVKASRSPLVTGSPKLPP----RGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGP 1124
V +S + T SP PP R G + PP S T TP Y G P
Sbjct: 620 TVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPP 679
Query: 1125 GHPGT--PGLEQVRTPTSSSGAPPP 1147
PGT PG +PT G PP
Sbjct: 680 AGPGTFKPG-----SPTVGPGPLPP 699
Score = 62.4 bits (150), Expect = 3e-09
Identities = 91/330 (27%), Positives = 118/330 (35%), Gaps = 60/330 (18%)
Query: 874 PGSDYFPGGTA---PGAP-GPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSG 929
P +PGGT G P GP G SS G G +PP T +S S+SG
Sbjct: 215 PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT---TPISV-----SSSG 266
Query: 930 NDGKPVS-------GGGGRGRGRRKRDSGHVSPGTF-------FDKYSAAPDSGGA---P 972
G P + GGG + HV+P + SA+P GA P
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLP 326
Query: 973 GVSPGQQQASGAAVGGSSAGETRG---APTPHEKALTSPSWGKGAELLLGDQPDLIGSLD 1029
G P A G +GG G +G AP+PH S S + S
Sbjct: 327 GHLPSPH-AMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS-APAPPMRFPYSSSSSSSAA 384
Query: 1030 GGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGV 1089
+ S SSS + F + + SY + S P + S P P LP + V
Sbjct: 385 ASSSSSSSSSSASPFPASQALPSYPH-------SFPPPTSLSVSNQPPKYTQPSLPSQAV 437
Query: 1090 GAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDE 1149
+ GP PPP L ++NS + P GP P T S+ PP
Sbjct: 438 WS--QGPPPPPPYGRL--LANSNAHP-------GPFPPSTGA--------QSTAHPPVST 478
Query: 1150 IHPLEILQAQIQLQRQQFSISEDQPLGLKG 1179
H Q Q Q Q+QQ + Q G G
Sbjct: 479 HHHHHQQQQQQQQQQQQQQQQQQQHHGNSG 508
Score = 39.3 bits (90), Expect = 0.025
Identities = 81/315 (25%), Positives = 101/315 (32%), Gaps = 40/315 (12%)
Query: 623 PHLAQESAWFSGPHPPP--GDLLPRRMGGSG-LPADCGPHDPSLAPPP---------PPG 670
P L ++ W GP PPP G LL G P G S A PP
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ--STAHPPVSTHHHHHQQQQ 487
Query: 671 GSGVLFRGPLQEPMRMPGEGHVP---ALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE 727
+ Q+ + G P A P P L+ G S SP G P
Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEGGSSHHAHPYAMSPSLGSLRPYPPGP 546
Query: 728 RRPPPPDFATS-ALGGQPGFPFGAAGRQSTPHS-GPGVNSPPSAGGGGGSSGGGGGGGAY 785
PPP S + G G P ++ S+ S G S PS S G G +
Sbjct: 547 AHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP-----SQGPQGAPYPF 601
Query: 786 PPQPDFQPSQRTSASKLGALSLGSFN-KPSSKDNLFGQSCLAALSTACQNMIASLGAPNL 844
PP P S T ++ + ++ K +S A A + P
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 845 NVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKAS 904
+F PP G R S G G+P PG P GPSG S
Sbjct: 662 PPSFRTGTPP-GYRGTSPPAGPGTFKPGSPT-------VGPGPLPPAGPSGLPSL----- 708
Query: 905 GPPNPPAQGDGTSLS 919
PP P A G LS
Sbjct: 709 -PPPPAAPASGPPLS 722
Score = 37.4 bits (85), Expect = 0.096
Identities = 70/293 (23%), Positives = 94/293 (32%), Gaps = 53/293 (18%)
Query: 888 PGPGGPSGTSSSGSKA---SGPPNP-PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGR 943
P P PS S ++ G +P D S SP+ + ND S G +G
Sbjct: 97 PRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDS-SSGLSQGP 155
Query: 944 GRRKRDSGHVSPGTFFDKYSAAPDSGGA---------PGVSPGQQQASGAAVGGSSAGET 994
R P F PDS P V+P A
Sbjct: 156 ARPYH------PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAP 209
Query: 995 RGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYA 1054
GAP PH + + G +L P +G GGA S PN G+ +
Sbjct: 210 PGAPPPHPQLYPGGTGG-----VLSGPP--MGPKGGGAASSVGGPNGGKQHPPPTTPI-- 260
Query: 1055 NEDEVSSSSDNPQALVKASRSPLVTGS--------------PKLPPRGVGAGEHGPKAPP 1100
VSSS + K +P+ G+ P LPP + A P
Sbjct: 261 ---SVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPG-------TPGLEQVRTPTSSSGAPP 1146
P LG + +P + G G G PG P + +SS+ APP
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPP 370
Score = 33.5 bits (75), Expect = 1.4
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 22/160 (13%)
Query: 1015 ELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYA--NEDEVSSSSDNPQALVKA 1072
EL P + SLDG + +D S + + D STS + + V + SD+ L +
Sbjct: 95 ELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQG 154
Query: 1073 SR-----SPLVTGSPKLP--------------PRGVGAGEHGPKAPPPALGLGIMSNSTS 1113
PL SP+ P P G H P PP + +
Sbjct: 155 PARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPP 214
Query: 1114 T-PDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHP 1152
P Y GG G G P + SS G P + HP
Sbjct: 215 PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 89.0 bits (219), Expect = 3e-17
Identities = 150/556 (26%), Positives = 190/556 (34%), Gaps = 95/556 (17%)
Query: 57 EPPILGMNMEPYGFHARGHSELHAGG----LQAQPVHGFFGGQQPHHGHP--GSHHPHQH 110
EPP M P G H +L+ GG L P+ GG G P G HP
Sbjct: 199 EPPTSRMFQAPPGAPPP-HPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257
Query: 111 HPHF--------------------GGNFGGPDPGASCLH---------GGRLLGYGGAAG 141
P GGN P A+ H R L A+
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 142 -GLGSQP-PFAEGYEH-MAESQGPESFGPQR-PGNLPDFHSSGASSHAVPAPCLPLDQSP 197
GLG+QP P H M + G GP++ P P HS +S + PAP + S
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSS 377
Query: 198 NRAASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYP-------GEAPSGHFDMFSPS 250
+ ++S SSS S S S P + A+ S +++P P + PS
Sbjct: 378 SSSSSA-AASSSSSSSSSSASPFPASQ--ALPSYPHSFPPPTSLSVSNQPPKYTQPSLPS 434
Query: 251 D---SEGQLPHYAAGRQV------PGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQ 301
S+G P GR + PG P A A V H Q QQQ QQQQ
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQ 494
Query: 302 QPQQQQQQH---------GVF---FERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQ 349
Q QQQQQQH G F E S P + PS+GS P P PPP
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHS 554
Query: 350 QQPPQQPPQQQPPPPPGL----LVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHA 405
Q Q PP Q S P + P P QG G P P +P+
Sbjct: 555 QVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF-----PPVPTVTT 609
Query: 406 QFEYPIHRLENRSMHPYSEPVFSMQHPPP--QQAPNQRLQHFDAPPYMNVAKRPRFDF-- 461
+ + P S PPP ++AP+ PP P F
Sbjct: 610 SSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGT 669
Query: 462 -PGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQ 520
PG G A G+ G SP+ PG P P PS PP
Sbjct: 670 PPGYRGTSPPAG-PGTFKPG------SPTVGPG---PLPPAGPSGLPSLPPPPAAPASGP 719
Query: 521 SLQQQQQQQQQQQQQQ 536
L Q +Q+ ++ +
Sbjct: 720 PLSATQIKQEPAEEYE 735
Score = 73.2 bits (178), Expect = 2e-12
Identities = 163/672 (24%), Positives = 220/672 (32%), Gaps = 137/672 (20%)
Query: 154 EHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA-ASFHGLPSSSGS 212
E+ ++S S GP RP + P P+P P D +P + ASF PS + +
Sbjct: 142 ENDSDSSSGLSQGPARPYHPPPLFP--------PSP-QPPDSTPRQPEASFEPHPSVTPT 192
Query: 213 DSHS-LEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFP 271
H+ +EP S + P AP H ++ P + G L G +
Sbjct: 193 GYHAPMEPPT--------SRMFQAPPGAPPPHPQLY-PGGTGGVLSGPPMGPK------- 236
Query: 272 GASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSV 331
G A G G K H PP P V SGA P
Sbjct: 237 GGGAASSVGGPNG-GKQH--PPPTTPIS------------VSSSGASGAPPTKPPTTPVG 281
Query: 332 GSRHPLMQPPQQAP------PPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQ--- 382
G P PP P PPP P +P PPGL + P LP P
Sbjct: 282 GGNLPSAPPPANFPHVTPNLPPP---PALRPLNNASASPPGLGAQP--LPGHLPSPHAMG 336
Query: 383 QGEAGTPSGGLQDGGPMLPSQHA-------------QFEYPIHRLENRSMHPYSEPVFSM 429
QG G P G + G + PS H+ +F Y + + S S
Sbjct: 337 QGMGGLPPGP-EKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Query: 430 QHP-PPQQAPNQRLQHFDAPPYMNVAKRP-RFDFPGSAGVDRCASWNGSMHNGALDNHLS 487
P P QA F P ++V+ +P ++ P + A W+ L
Sbjct: 396 ASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPS---LPSQAVWSQGPPPPPPYGRLL 452
Query: 488 PSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQ 547
++ PG F P + PP+ HQ QQQQQQQQQQQQQQQQ
Sbjct: 453 ANSNAH-PGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP 511
Query: 548 QQQRQNAALMIKQMASRNQQQRLRQPNLAQL-------GH-PGDVGQGGLVHGGPVGGLA 599
+ ++ +S + P+L L H P Q GP G
Sbjct: 512 PGAFPHP---LEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNG--- 565
Query: 600 QPNFEREGGSTGAGRLGTFEQQAPHLAQESAWFSGPHPPPGDLLPRRMGGSGLPADCGPH 659
P S+ + G++ P +Q P PP + S + A
Sbjct: 566 -PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624
Query: 660 DPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGV 719
PP GP R P G PG + PG+
Sbjct: 625 PAGYKTASPP--------GPPPYGKRAPSPGAYKTATPPGYK-------------PGS-- 661
Query: 720 GLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSP--PSAGGGGGSSG 777
PP F T G PG+ R ++P +GPG P P+ G G
Sbjct: 662 ------------PPSFRT---GTPPGY------RGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 778 GGGGGGAYPPQP 789
G G + PP P
Sbjct: 701 GPSGLPSLPPPP 712
Score = 64.7 bits (156), Expect = 6e-10
Identities = 132/565 (23%), Positives = 185/565 (32%), Gaps = 84/565 (14%)
Query: 635 PHPPPGDLLPRRMGGSGLP----ADCGPHDPSLAP-----------PPP-----PGGSGV 674
P P P D PR+ S P G H P P PPP PGG+G
Sbjct: 167 PSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGG 226
Query: 675 LFRGPLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPD 734
+ GP PM G G ++ GG GG Q P + + S+ + PP
Sbjct: 227 VLSGP---PMGPKGGGAASSV-------GGPNGGK-QHPPPTTPISVSSSGASGAPPTKP 275
Query: 735 FATSALGGQ-PGFPFGAAGRQSTPH---------------SGPGVNSPPSAGGGGGSSGG 778
T GG P P A TP+ S PG+ + P G
Sbjct: 276 PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAM 335
Query: 779 GGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP-------SSKDNLFGQSCLAALSTA 831
G G G PP P+ P+ S L S + P SS + S ++ S++
Sbjct: 336 GQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSS 395
Query: 832 CQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPG 891
AS P+ +F PP +S N+ P + G P P
Sbjct: 396 ASPFPASQALPSYPHSF----PPPTSLSVS-NQPPKYTQPSLPSQAVWSQG-----PPPP 445
Query: 892 GPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKR--- 948
P G + S A P PP+ G ++ P + + + + ++++
Sbjct: 446 PPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHG 505
Query: 949 DSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSP 1008
+SG PG F + G + P S ++ G P PH + S
Sbjct: 506 NSGPPPPGAF----PHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAH-LPPPHSQVSYSQ 560
Query: 1009 SWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQA 1068
+ G + S G SP+ G + S++ A
Sbjct: 561 AGPNGPPVSSSSNSSSSTS-QGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIA 619
Query: 1069 LVKASRSPLVTGSPKLPP----RGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGP 1124
V +S + T SP PP R G + PP S T TP Y G P
Sbjct: 620 TVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPP 679
Query: 1125 GHPGT--PGLEQVRTPTSSSGAPPP 1147
PGT PG +PT G PP
Sbjct: 680 AGPGTFKPG-----SPTVGPGPLPP 699
Score = 62.4 bits (150), Expect = 3e-09
Identities = 91/330 (27%), Positives = 118/330 (35%), Gaps = 60/330 (18%)
Query: 874 PGSDYFPGGTA---PGAP-GPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSG 929
P +PGGT G P GP G SS G G +PP T +S S+SG
Sbjct: 215 PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT---TPISV-----SSSG 266
Query: 930 NDGKPVS-------GGGGRGRGRRKRDSGHVSPGTF-------FDKYSAAPDSGGA---P 972
G P + GGG + HV+P + SA+P GA P
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLP 326
Query: 973 GVSPGQQQASGAAVGGSSAGETRG---APTPHEKALTSPSWGKGAELLLGDQPDLIGSLD 1029
G P A G +GG G +G AP+PH S S + S
Sbjct: 327 GHLPSPH-AMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS-APAPPMRFPYSSSSSSSAA 384
Query: 1030 GGAKSDSSSPNVGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGV 1089
+ S SSS + F + + SY + S P + S P P LP + V
Sbjct: 385 ASSSSSSSSSSASPFPASQALPSYPH-------SFPPPTSLSVSNQPPKYTQPSLPSQAV 437
Query: 1090 GAGEHGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDE 1149
+ GP PPP L ++NS + P GP P T S+ PP
Sbjct: 438 WS--QGPPPPPPYGRL--LANSNAHP-------GPFPPSTGA--------QSTAHPPVST 478
Query: 1150 IHPLEILQAQIQLQRQQFSISEDQPLGLKG 1179
H Q Q Q Q+QQ + Q G G
Sbjct: 479 HHHHHQQQQQQQQQQQQQQQQQQQHHGNSG 508
Score = 39.3 bits (90), Expect = 0.025
Identities = 81/315 (25%), Positives = 101/315 (32%), Gaps = 40/315 (12%)
Query: 623 PHLAQESAWFSGPHPPP--GDLLPRRMGGSG-LPADCGPHDPSLAPPP---------PPG 670
P L ++ W GP PPP G LL G P G S A PP
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ--STAHPPVSTHHHHHQQQQ 487
Query: 671 GSGVLFRGPLQEPMRMPGEGHVP---ALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE 727
+ Q+ + G P A P P L+ G S SP G P
Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEGGSSHHAHPYAMSPSLGSLRPYPPGP 546
Query: 728 RRPPPPDFATS-ALGGQPGFPFGAAGRQSTPHS-GPGVNSPPSAGGGGGSSGGGGGGGAY 785
PPP S + G G P ++ S+ S G S PS S G G +
Sbjct: 547 AHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP-----SQGPQGAPYPF 601
Query: 786 PPQPDFQPSQRTSASKLGALSLGSFN-KPSSKDNLFGQSCLAALSTACQNMIASLGAPNL 844
PP P S T ++ + ++ K +S A A + P
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 845 NVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKAS 904
+F PP G R S G G+P PG P GPSG S
Sbjct: 662 PPSFRTGTPP-GYRGTSPPAGPGTFKPGSPT-------VGPGPLPPAGPSGLPSL----- 708
Query: 905 GPPNPPAQGDGTSLS 919
PP P A G LS
Sbjct: 709 -PPPPAAPASGPPLS 722
Score = 37.4 bits (85), Expect = 0.096
Identities = 70/293 (23%), Positives = 94/293 (32%), Gaps = 53/293 (18%)
Query: 888 PGPGGPSGTSSSGSKA---SGPPNP-PAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGR 943
P P PS S ++ G +P D S SP+ + ND S G +G
Sbjct: 97 PRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDS-SSGLSQGP 155
Query: 944 GRRKRDSGHVSPGTFFDKYSAAPDSGGA---------PGVSPGQQQASGAAVGGSSAGET 994
R P F PDS P V+P A
Sbjct: 156 ARPYH------PPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAP 209
Query: 995 RGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYA 1054
GAP PH + + G +L P +G GGA S PN G+ +
Sbjct: 210 PGAPPPHPQLYPGGTGG-----VLSGPP--MGPKGGGAASSVGGPNGGKQHPPPTTPI-- 260
Query: 1055 NEDEVSSSSDNPQALVKASRSPLVTGS--------------PKLPPRGVGAGEHGPKAPP 1100
VSSS + K +P+ G+ P LPP + A P
Sbjct: 261 ---SVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPG-------TPGLEQVRTPTSSSGAPP 1146
P LG + +P + G G G PG P + +SS+ APP
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPP 370
Score = 33.5 bits (75), Expect = 1.4
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 22/160 (13%)
Query: 1015 ELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYA--NEDEVSSSSDNPQALVKA 1072
EL P + SLDG + +D S + + D STS + + V + SD+ L +
Sbjct: 95 ELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQG 154
Query: 1073 SR-----SPLVTGSPKLP--------------PRGVGAGEHGPKAPPPALGLGIMSNSTS 1113
PL SP+ P P G H P PP + +
Sbjct: 155 PARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPP 214
Query: 1114 T-PDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHP 1152
P Y GG G G P + SS G P + HP
Sbjct: 215 PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,989,673
Number of Sequences: 37866
Number of extensions: 5722684
Number of successful extensions: 108916
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 1813
Number of HSP's that attempted gapping in prelim test: 34220
Number of HSP's gapped (non-prelim): 34931
length of query: 1320
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1206
effective length of database: 13,930,794
effective search space: 16800537564
effective search space used: 16800537564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.