Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IPO7 Sequence: fasta or formatted (1038aa) NCBI GI: 5453998
Description:

importin 7

Referenced in:

Nucleus and Nucleolus
Ran and Rag
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         67           2
 C cysteine            2.2         23           1
 D aspartate           6.8         71           4
 E glutamate           8.9         92           2
 F phenylalanine       3.8         39           1
 G glycine             3.8         39           2
 H histidine           2.7         28           2
 I isoleucine          7.1         74           2
 K lysine              5.1         53           3
 L leucine            11.3        117           3
 M methionine          2.8         29           2
 N asparagine          3.9         41           2
 P proline             4.3         45           1
 Q glutamine           6.8         71           2
 R arginine            3.6         37           2
 S serine              3.8         39           2
 T threonine           5.4         56           2
 V valine              6.2         64           2
 W tryptophan          1.3         14           2
 Y tyrosine            3.8         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   importin 7 
IPO8                  0.649   importin 8 
CSE1L                 0.035   CSE1 chromosome segregation 1-like protein 
IPO9                  0.016   importin 9 
IPO11                 0.015   Ran binding protein 11 isoform 1 
IPO11                 0.015   Ran binding protein 11 isoform 2 
NCL                   0.013   nucleolin 
MYT1L                 0.012   myelin transcription factor 1-like 
UBTF                  0.012   upstream binding transcription factor, RNA polymera...
UBTF                  0.012   upstream binding transcription factor, RNA polymera...
UBTF                  0.012   upstream binding transcription factor, RNA polymerase...
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32B                0.010   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
DAXX                  0.010   death-domain associated protein isoform a 
DAXX                  0.010   death-domain associated protein isoform a 
DAXX                  0.010   death-domain associated protein isoform b 
PTMA                  0.010   prothymosin, alpha isoform 1 
KIAA1429              0.010   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.010   hypothetical protein LOC25962 isoform 2 
VPRBP                 0.010   HIV-1 Vpr binding protein 
LOC647020             0.009   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.009   PREDICTED: similar to acidic (leucine-rich) nuclear...
TRIM44                0.009   DIPB protein 
PTMA                  0.009   prothymosin, alpha isoform 2 
LOC441454             0.009   PREDICTED: hypothetical protein 
APP                   0.009   amyloid beta A4 protein isoform c precursor 
APP                   0.009   amyloid beta A4 protein isoform b precursor 
APP                   0.009   amyloid beta A4 protein isoform a precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press