Guide to the Human Genome
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Name: ANP32B Sequence: fasta or formatted (251aa) NCBI GI: 5454088
Description:

acidic (leucine-rich) nuclear phosphoprotein 32 family, member B

Referenced in:

Protein Composition and Structure
HLA and Related Proteins
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          6           2
 C cysteine            1.2          3           1
 D aspartate          15.1         38           3
 E glutamate          22.3         56           5
 F phenylalanine       2.8          7           1
 G glycine             6.4         16           2
 H histidine           0.8          2           1
 I isoleucine          2.4          6           1
 K lysine              6.8         17           2
 L leucine            13.1         33           2
 M methionine          1.2          3           1
 N asparagine          5.2         13           1
 P proline             2.8          7           1
 Q glutamine           0.8          2           1
 R arginine            4.0         10           2
 S serine              4.4         11           1
 T threonine           2.8          7           1
 V valine              4.4         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic (leucine-rich) nuclear phosphoprotein 32 famil... 
LOC647020             0.779   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.779   PREDICTED: similar to acidic (leucine-rich) nuclear...
ANP32A                0.671   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32E                0.565   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32C                0.492   acidic nuclear phosphoprotein 32C 
LOC647020             0.469   PREDICTED: similar to hCG1791241 
ANP32E                0.448   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.394   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32D                0.338   acidic nuclear phosphoprotein 32D 
RPGR                  0.119   retinitis pigmentosa GTPase regulator isoform C [Hom...
PELP1                 0.110   proline, glutamic acid and leucine rich protein 1 [...
NCL                   0.108   nucleolin 
UBTF                  0.108   upstream binding transcription factor, RNA polymera...
UBTF                  0.108   upstream binding transcription factor, RNA polymera...
UBTF                  0.108   upstream binding transcription factor, RNA polymerase...
MYT1L                 0.108   myelin transcription factor 1-like 
CENPB                 0.102   centromere protein B 
YTHDC1                0.096   splicing factor YT521-B isoform 2 
YTHDC1                0.096   splicing factor YT521-B isoform 1 
MYT1                  0.090   myelin transcription factor 1 
EIF5B                 0.087   eukaryotic translation initiation factor 5B 
BAZ2B                 0.085   bromodomain adjacent to zinc finger domain, 2B [Homo...
TRIM44                0.083   DIPB protein 
NSBP1                 0.083   nucleosomal binding protein 1 
ATAD2                 0.083   ATPase family, AAA domain containing 2 
HTATSF1               0.081   HIV-1 Tat specific factor 1 
HTATSF1               0.081   HIV-1 Tat specific factor 1 
RANGAP1               0.081   Ran GTPase activating protein 1 
CDC2L2                0.081   cell division cycle 2-like 2 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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