Guide to the Human Genome
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Name: IQSEC2 Sequence: fasta or formatted (949aa) NCBI GI: 53832026
Description:

IQ motif and Sec7 domain 2 isoform 2

Referenced in:

ADP-Ribosylation Factors
Additional Interaction Domain Families

Other entries for this name:
alt prot [1488aa] IQ motif and Sec7 domain 2 isoform1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         57           2
 C cysteine            1.8         17           3
 D aspartate           5.7         54           2
 E glutamate           7.4         70           4
 F phenylalanine       3.5         33           1
 G glycine             8.0         76           3
 H histidine           2.0         19           1
 I isoleucine          3.4         32           2
 K lysine              4.4         42           3
 L leucine             9.1         86           2
 M methionine          2.3         22           2
 N asparagine          3.2         30           2
 P proline             7.9         75           3
 Q glutamine           5.1         48           2
 R arginine            8.4         80           2
 S serine             10.7        102           3
 T threonine           3.4         32           2
 V valine              5.0         47           2
 W tryptophan          0.3          3           1
 Y tyrosine            2.5         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.952   IQ motif and Sec7 domain 2 isoform1 
IQSEC1                0.517   IQ motif and Sec7 domain 1 isoform b 
IQSEC1                0.516   IQ motif and Sec7 domain 1 isoform a 
IQSEC3                0.290   IQ motif and Sec7 domain 3 
ARFGEF1               0.070   brefeldin A-inhibited guanine nucleotide-exchange pr...
CYTH2                 0.068   cytohesin 2 isoform 2 
CYTH2                 0.068   cytohesin 2 isoform 1 
ARFGEF2               0.065   ADP-ribosylation factor guanine nucleotide-exchange...
CYTH3                 0.065   cytohesin 3 
CYTH1                 0.065   cytohesin 1 isoform 2 
CYTH1                 0.065   cytohesin 1 isoform 1 
CYTH4                 0.060   cytohesin 4 
GBF1                  0.057   golgi-specific brefeldin A resistant guanine nucleoti...
FBXO8                 0.043   F-box only protein 8 
PSD                   0.042   pleckstrin and Sec7 domain containing 
PSD2                  0.033   pleckstrin and Sec7 domain containing 2 
PSD3                  0.031   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.031   ADP-ribosylation factor guanine nucleotide factor 6...
PSD4                  0.031   pleckstrin and Sec7 domain containing 4 
SCAF1                 0.013   SR-related CTD-associated factor 1 
C2orf55               0.013   hypothetical protein LOC343990 
PRB2                  0.013   proline-rich protein BstNI subfamily 2 
LOC100127891          0.012   PREDICTED: similar to hCG2042508 
LOC100127891          0.012   PREDICTED: similar to hCG2042508 
LOC100127891          0.012   PREDICTED: similar to hCG2042508 
MEPCE                 0.012   bin3, bicoid-interacting 3 
PRB4                  0.012   proline-rich protein BstNI subfamily 4 precursor [Ho...
SRRM2                 0.012   splicing coactivator subunit SRm300 
COL11A2               0.011   collagen, type XI, alpha 2 isoform 2 preproprotein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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