Guide to the Human Genome
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Name: OR13G1 Sequence: fasta or formatted (307aa) NCBI GI: 53828698
Description:

olfactory receptor, family 13, subfamily G, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           2
 C cysteine            2.9          9           1
 D aspartate           2.0          6           1
 E glutamate           2.9          9           1
 F phenylalanine       6.5         20           2
 G glycine             3.6         11           1
 H histidine           2.9          9           2
 I isoleucine         10.4         32           3
 K lysine              2.9          9           2
 L leucine            11.4         35           2
 M methionine          5.2         16           1
 N asparagine          3.6         11           2
 P proline             3.9         12           2
 Q glutamine           1.3          4           1
 R arginine            3.3         10           1
 S serine              6.2         19           2
 T threonine           9.4         29           2
 V valine              8.8         27           2
 W tryptophan          0.7          2           1
 Y tyrosine            5.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 13, subfamily G, member 1... 
OR13A1                0.532   olfactory receptor, family 13, subfamily A, member ...
OR5AR1                0.440   olfactory receptor, family 5, subfamily AR, member 1...
OR5V1                 0.439   olfactory receptor, family 5, subfamily V, member 1 ...
OR2G3                 0.427   olfactory receptor, family 2, subfamily G, member 3 ...
OR1L8                 0.427   olfactory receptor, family 1, subfamily L, member 8 ...
OR5AS1                0.425   olfactory receptor, family 5, subfamily AS, member 1...
OR1F1                 0.420   olfactory receptor, family 1, subfamily F, member 1 [...
OR1J2                 0.418   olfactory receptor, family 1, subfamily J, member 2 ...
OR3A3                 0.417   olfactory receptor, family 3, subfamily A, member 3 ...
OR8A1                 0.415   olfactory receptor, family 8, subfamily A, member 1 ...
OR5A2                 0.415   olfactory receptor, family 5, subfamily A, member 2 ...
OR1C1                 0.413   olfactory receptor, family 1, subfamily C, member 1...
OR2C3                 0.413   olfactory receptor, family 2, subfamily C, member 3...
OR5AP2                0.413   olfactory receptor, family 5, subfamily AP, member 2...
OR5M10                0.413   olfactory receptor, family 5, subfamily M, member 10...
OR3A2                 0.412   olfactory receptor, family 3, subfamily A, member 2 ...
OR1L3                 0.412   olfactory receptor, family 1, subfamily L, member 3 ...
OR1J4                 0.410   olfactory receptor, family 1, subfamily J, member 4 ...
OR3A1                 0.408   olfactory receptor, family 3, subfamily A, member 1 [...
OR2W1                 0.408   olfactory receptor, family 2, subfamily W, member 1 ...
OR5B21                0.408   olfactory receptor, family 5, subfamily B, member 21...
OR5F1                 0.408   olfactory receptor, family 5, subfamily F, member 1 ...
OR1J1                 0.406   olfactory receptor, family 1, subfamily J, member 1 ...
OR5A1                 0.406   olfactory receptor, family 5, subfamily A, member 1 ...
OR1L1                 0.406   olfactory receptor, family 1, subfamily L, member 1...
OR2B11                0.405   olfactory receptor, family 2, subfamily B, member 11...
OR5M11                0.405   olfactory receptor, family 5, subfamily M, member 11...
OR8B3                 0.403   olfactory receptor, family 8, subfamily B, member 3 ...
OR1N1                 0.403   olfactory receptor, family 1, subfamily N, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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