Guide to the Human Genome
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Name: OR3A1 Sequence: fasta or formatted (315aa) NCBI GI: 4505519
Description:

olfactory receptor, family 3, subfamily A, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         28           3
 C cysteine            3.2         10           1
 D aspartate           2.2          7           1
 E glutamate           1.9          6           1
 F phenylalanine       7.3         23           3
 G glycine             6.0         19           1
 H histidine           1.9          6           1
 I isoleucine          5.7         18           2
 K lysine              2.2          7           2
 L leucine            13.7         43           3
 M methionine          3.8         12           1
 N asparagine          4.1         13           1
 P proline             4.4         14           1
 Q glutamine           3.2         10           1
 R arginine            4.8         15           2
 S serine              7.6         24           2
 T threonine           6.3         20           1
 V valine              9.2         29           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 3, subfamily A, member 1 [... 
OR3A2                 0.827   olfactory receptor, family 3, subfamily A, member 2 ...
OR3A3                 0.787   olfactory receptor, family 3, subfamily A, member 3 ...
OR5V1                 0.450   olfactory receptor, family 5, subfamily V, member 1 ...
OR5AR1                0.432   olfactory receptor, family 5, subfamily AR, member 1...
OR5B21                0.432   olfactory receptor, family 5, subfamily B, member 21...
OR8D1                 0.418   olfactory receptor, family 8, subfamily D, member 1 ...
OR5B12                0.418   olfactory receptor, family 5, subfamily B, member 12...
OR1J4                 0.418   olfactory receptor, family 1, subfamily J, member 4 ...
OR1F1                 0.417   olfactory receptor, family 1, subfamily F, member 1 [...
OR5A2                 0.413   olfactory receptor, family 5, subfamily A, member 2 ...
OR9G4                 0.410   olfactory receptor, family 9, subfamily G, member 4 ...
OR1J2                 0.405   olfactory receptor, family 1, subfamily J, member 2 ...
OR8B12                0.405   olfactory receptor, family 8, subfamily B, member 12...
OR1C1                 0.403   olfactory receptor, family 1, subfamily C, member 1...
OR2B2                 0.402   olfactory receptor, family 2, subfamily B, member 2 ...
OR2A12                0.402   olfactory receptor, family 2, subfamily A, member 12...
OR1J1                 0.402   olfactory receptor, family 1, subfamily J, member 1 ...
OR5AP2                0.402   olfactory receptor, family 5, subfamily AP, member 2...
OR7D4                 0.402   olfactory receptor, family 7, subfamily D, member 4 ...
OR13G1                0.400   olfactory receptor, family 13, subfamily G, member 1...
OR1S1                 0.400   olfactory receptor, family 1, subfamily S, member 1 ...
OR8D4                 0.400   olfactory receptor, family 8, subfamily D, member 4 ...
OR8B8                 0.400   olfactory receptor, family 8, subfamily B, member 8 ...
OR1I1                 0.400   olfactory receptor, family 1, subfamily I, member 1 ...
OR7A17                0.398   olfactory receptor, family 7, subfamily A, member 17...
OR5R1                 0.398   olfactory receptor, family 5, subfamily R, member 1 ...
OR7A10                0.398   olfactory receptor, family 7, subfamily A, member 10...
OR1M1                 0.398   olfactory receptor, family 1, subfamily M, member 1 ...
OR1N1                 0.398   olfactory receptor, family 1, subfamily N, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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