Guide to the Human Genome
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Name: ACTR2 Sequence: fasta or formatted (399aa) NCBI GI: 53692187
Description:

actin-related protein 2 isoform a

Referenced in:

Actin and Related Proteins

Other entries for this name:
alt prot [394aa] actin-related protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         17           2
 C cysteine            1.3          5           1
 D aspartate           5.3         21           2
 E glutamate           8.0         32           1
 F phenylalanine       4.0         16           1
 G glycine             8.0         32           2
 H histidine           2.0          8           1
 I isoleucine          6.3         25           2
 K lysine              6.8         27           2
 L leucine            10.3         41           4
 M methionine          3.3         13           1
 N asparagine          4.3         17           2
 P proline             4.3         17           2
 Q glutamine           2.8         11           1
 R arginine            6.3         25           2
 S serine              3.8         15           1
 T threonine           5.5         22           2
 V valine              9.0         36           3
 W tryptophan          0.8          3           1
 Y tyrosine            4.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin-related protein 2 isoform a 
ACTR2                 0.979   actin-related protein 2 isoform b 
ACTA1                 0.427   actin, alpha 1, skeletal muscle 
ACTC1                 0.427   cardiac muscle alpha actin 1 proprotein 
ACTB                  0.427   beta actin 
ACTG1                 0.427   actin, gamma 1 propeptide 
ACTA2                 0.420   alpha 2 actin 
ACTA2                 0.420   alpha 2 actin 
LOC653269             0.419   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.419   PREDICTED: similar to protein expressed in prostate,...
POTEE                 0.418   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.416   PREDICTED: actin, beta-like 3 
ACTBL3                0.416   PREDICTED: kappa-actin 
ACTG2                 0.416   actin, gamma 2 propeptide 
ACTBL2                0.413   actin, beta-like 2 
POTEF                 0.413   prostate, ovary, testis expressed protein on chromo...
ACTBL3                0.411   PREDICTED: actin, beta-like 3 
LOC653781             0.410   PREDICTED: similar to protein expressed in prostate...
ACTR1B                0.380   ARP1 actin-related protein 1 homolog B, centractin b...
ACTR1A                0.379   ARP1 actin-related protein 1 homolog A, centractin al...
ARPM1                 0.312   actin related protein M1 
ACTRT2                0.292   actin-related protein M2 
ACTRT1                0.290   actin-related protein T1 
ACTL7A                0.252   actin-like 7A 
ACTL7B                0.249   actin-like 7B 
LOC100128069          0.239   PREDICTED: similar to alpha actin 
ACTR3B                0.238   actin-related protein 3-beta isoform 1 
ACTR3                 0.230   ARP3 actin-related protein 3 homolog 
LOC100128069          0.229   PREDICTED: similar to Actin, alpha 1, skeletal musc...
ACTL9                 0.229   actin-like 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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