Guide to the Human Genome
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Name: RECQL5 Sequence: fasta or formatted (410aa) NCBI GI: 51242943
Description:

RecQ protein-like 5 isoform 3

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [991aa] RecQ protein-like 5 isoform 1
alt prot [435aa] RecQ protein-like 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         39           2
 C cysteine            2.9         12           1
 D aspartate           5.1         21           1
 E glutamate           5.4         22           2
 F phenylalanine       4.6         19           1
 G glycine             5.6         23           1
 H histidine           2.4         10           2
 I isoleucine          3.7         15           1
 K lysine              7.3         30           2
 L leucine            10.7         44           2
 M methionine          2.0          8           1
 N asparagine          2.7         11           1
 P proline             4.1         17           1
 Q glutamine           4.1         17           1
 R arginine            5.9         24           2
 S serine              7.3         30           3
 T threonine           4.9         20           2
 V valine              7.8         32           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RecQ protein-like 5 isoform 3 
RECQL5                1.000   RecQ protein-like 5 isoform 1 
RECQL5                1.000   RecQ protein-like 5 isoform 2 
BLM                   0.317   Bloom syndrome protein 
RECQL                 0.296   RecQ protein-like 
RECQL                 0.296   RecQ protein-like 
WRN                   0.235   Werner syndrome protein 
LOC652522             0.235   PREDICTED: similar to Werner syndrome ATP-dependent...
RECQL4                0.198   RecQ protein-like 4 
DDX27                 0.049   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX5                  0.045   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX46                 0.040   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX43                 0.039   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX50                 0.039   nucleolar protein GU2 
DDX23                 0.039   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX52                 0.039   ATP-dependent RNA helicase ROK1 isoform b 
DDX52                 0.039   ATP-dependent RNA helicase ROK1 isoform a 
DDX17                 0.038   DEAD box polypeptide 17 isoform 3 
DDX17                 0.038   DEAD box polypeptide 17 isoform 1 
DDX3Y                 0.036   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.036   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX42                 0.036   DEAD box polypeptide 42 protein 
DDX42                 0.036   DEAD box polypeptide 42 protein 
DDX53                 0.035   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX4                  0.031   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.031   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.031   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX21                 0.030   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX59                 0.030   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX41                 0.028   DEAD-box protein abstrakt 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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