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Name: PDE9A Sequence: fasta or formatted (492aa) NCBI GI: 48762726
Description:

phosphodiesterase 9A isoform f

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [593aa] phosphodiesterase 9A isoform a
alt prot [533aa] phosphodiesterase 9A isoform b
alt prot [466aa] phosphodiesterase 9A isoform c
alt prot [465aa] phosphodiesterase 9A isoform d
alt prot [540aa] phosphodiesterase 9A isoform e
alt prot [386aa] phosphodiesterase 9A isoform g
alt prot [386aa] phosphodiesterase 9A isoform g
alt prot [507aa] phosphodiesterase 9A isoform h
alt prot [433aa] phosphodiesterase 9A isoform i
alt prot [376aa] phosphodiesterase 9A isoform j
alt prot [459aa] phosphodiesterase 9A isoform k
alt prot [491aa] phosphodiesterase 9A isoform l
alt prot [386aa] phosphodiesterase 9A isoform g
alt prot [376aa] phosphodiesterase 9A isoform j
alt prot [526aa] phosphodiesterase 9A isoform m
alt prot [552aa] phosphodiesterase 9A isoform n
alt prot [567aa] phosphodiesterase 9A isoform o
alt prot [386aa] phosphodiesterase 9A isoform g
alt prot [386aa] phosphodiesterase 9A isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         31           2
 C cysteine            3.0         15           2
 D aspartate           6.1         30           2
 E glutamate           9.3         46           2
 F phenylalanine       4.5         22           1
 G glycine             1.8          9           1
 H histidine           2.6         13           2
 I isoleucine          5.9         29           1
 K lysine              6.5         32           2
 L leucine             9.3         46           2
 M methionine          4.7         23           2
 N asparagine          4.7         23           2
 P proline             5.1         25           2
 Q glutamine           3.0         15           1
 R arginine            6.3         31           2
 S serine              5.9         29           2
 T threonine           5.3         26           2
 V valine              5.7         28           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphodiesterase 9A isoform f 
PDE9A                 0.990   phosphodiesterase 9A isoform b 
PDE9A                 0.939   phosphodiesterase 9A isoform h 
PDE9A                 0.937   phosphodiesterase 9A isoform c 
PDE9A                 0.920   phosphodiesterase 9A isoform k 
PDE9A                 0.915   phosphodiesterase 9A isoform e 
PDE9A                 0.909   phosphodiesterase 9A isoform o 
PDE9A                 0.909   phosphodiesterase 9A isoform n 
PDE9A                 0.909   phosphodiesterase 9A isoform m 
PDE9A                 0.909   phosphodiesterase 9A isoform a 
PDE9A                 0.879   phosphodiesterase 9A isoform i 
PDE9A                 0.876   phosphodiesterase 9A isoform l 
PDE9A                 0.876   phosphodiesterase 9A isoform d 
PDE9A                 0.797   phosphodiesterase 9A isoform g 
PDE9A                 0.797   phosphodiesterase 9A isoform g 
PDE9A                 0.797   phosphodiesterase 9A isoform g 
PDE9A                 0.797   phosphodiesterase 9A isoform g 
PDE9A                 0.797   phosphodiesterase 9A isoform g 
PDE9A                 0.777   phosphodiesterase 9A isoform j 
PDE9A                 0.777   phosphodiesterase 9A isoform j 
PDE4B                 0.156   phosphodiesterase 4B isoform 2 
PDE4D                 0.155   phosphodiesterase 4D isoform 1 
PDE4D                 0.155   phosphodiesterase 4D isoform 2 
PDE4B                 0.155   phosphodiesterase 4B isoform 1 
PDE4B                 0.155   phosphodiesterase 4B isoform 3 
PDE4B                 0.155   phosphodiesterase 4B isoform 1 
PDE4A                 0.155   phosphodiesterase 4A isoform 3 
PDE4A                 0.155   phosphodiesterase 4A isoform 2 
PDE4A                 0.155   phosphodiesterase 4A isoform 1 
PDE4A                 0.155   phosphodiesterase 4A isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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