Guide to the Human Genome
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Name: JUNB Sequence: fasta or formatted (347aa) NCBI GI: 4504809
Description:

jun B proto-oncogene

Referenced in:

Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         34           2
 C cysteine            0.9          3           1
 D aspartate           3.2         11           2
 E glutamate           5.2         18           2
 F phenylalanine       2.3          8           1
 G glycine            15.0         52           5
 H histidine           2.3          8           1
 I isoleucine          1.7          6           1
 K lysine              5.5         19           1
 L leucine             8.6         30           3
 M methionine          1.4          5           1
 N asparagine          2.9         10           1
 P proline             9.2         32           3
 Q glutamine           3.2         11           1
 R arginine            5.2         18           1
 S serine              8.1         28           2
 T threonine           6.6         23           3
 V valine              5.2         18           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   jun B proto-oncogene 
JUN                   0.331   jun oncogene 
JUND                  0.312   jun D proto-oncogene 
ATF7                  0.050   activating transcription factor 7 isoform 3 
ATF7                  0.050   activating transcription factor 7 isoform 2 
ATF7                  0.050   activating transcription factor 7 isoform 1 
FOSB                  0.044   FBJ murine osteosarcoma viral oncogene homolog B is...
ATF2                  0.043   activating transcription factor 2 
MAFA                  0.040   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
CREB5                 0.038   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.038   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.038   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.038   cAMP responsive element binding protein 5 isoform al...
FOSL1                 0.037   FOS-like antigen 1 
CNOT3                 0.037   CCR4-NOT transcription complex, subunit 3 
MNX1                  0.037   homeo box HB9 
PPP1R10               0.034   protein phosphatase 1, regulatory subunit 10 
ZNF503                0.034   zinc finger protein 503 
GATA6                 0.032   GATA binding protein 6 
LOR                   0.031   loricrin 
KRT9                  0.029   keratin 9 
PRR12                 0.029   proline rich 12 
BACH1                 0.029   BTB and CNC homology 1 transcription factor isoform ...
BACH1                 0.029   BTB and CNC homology 1 transcription factor isoform a...
FOSL2                 0.028   FOS-like antigen 2 
MN1                   0.028   meningioma  1 
GATA4                 0.028   GATA binding protein 4 
CEBPE                 0.028   CCAAT/enhancer binding protein epsilon 
CEBPA                 0.028   CCAAT/enhancer binding protein alpha 
BATF3                 0.028   basic leucine zipper transcription factor, ATF-like 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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