Guide to the Human Genome
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Search of human proteins with 33149310

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s...   313   3e-86
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa...   313   3e-86
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s...   310   3e-85
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa...   307   2e-84
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s...   302   6e-83
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s...   296   5e-81
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]          286   3e-78
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s...   252   7e-68
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]         201   2e-52
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]          201   2e-52
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]         199   5e-52
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa...   199   5e-52
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s...   175   1e-44
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]            136   5e-33
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap...   129   9e-31
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]            126   6e-30
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]            126   6e-30
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s...   120   4e-28
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi...   118   2e-27
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa...   114   4e-26
gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]         113   5e-26
gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]      113   7e-26
gi|112382377 ubiquitin-conjugating enzyme E2S [Homo sapiens]          107   5e-24
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa...   105   1e-23
gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo s...   105   1e-23

>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  313 bits (802), Expect = 3e-86
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNRISREWTQKYAM
Sbjct: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147


>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
           sapiens]
          Length = 148

 Score =  310 bits (794), Expect = 3e-85
 Identities = 144/147 (97%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDRDKYNR++REWT+KYAM
Sbjct: 121 PEIARIYKTDRDKYNRLAREWTEKYAM 147


>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
           sapiens]
          Length = 147

 Score =  307 bits (787), Expect = 2e-84
 Identities = 143/147 (97%), Positives = 147/147 (100%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRI+KEL+DLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIARIYKTDR+KYNRI+REWTQKYAM
Sbjct: 121 PEIARIYKTDREKYNRIAREWTQKYAM 147


>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
           sapiens]
          Length = 149

 Score =  302 bits (774), Expect = 6e-83
 Identities = 141/144 (97%), Positives = 143/144 (99%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           K ++KELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK
Sbjct: 6   KCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 65

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
           PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI
Sbjct: 66  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 125

Query: 124 ARIYKTDRDKYNRISREWTQKYAM 147
           ARIYKTDRDKYNRISREWTQKYAM
Sbjct: 126 ARIYKTDRDKYNRISREWTQKYAM 149


>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
           sapiens]
          Length = 147

 Score =  296 bits (757), Expect = 5e-81
 Identities = 135/147 (91%), Positives = 142/147 (96%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRI KEL+DL RDPPAQCSAGPVGDD+FHWQATIMGPNDSPYQGGVFFLTIHFPTDY
Sbjct: 1   MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPKVAFTT+IYHPNINSNGSICLDILRSQWSPALT+SKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           PEIA  YK DR+KYNR++REWTQKYAM
Sbjct: 121 PEIAHTYKADREKYNRLAREWTQKYAM 147


>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
          Length = 147

 Score =  286 bits (733), Expect = 3e-78
 Identities = 130/147 (88%), Positives = 141/147 (95%)

Query: 1   MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           MALKRI KELSDL RDPPA CSAGPVGDD+FHWQATIMGP DS YQGGVFFLT+HFPTDY
Sbjct: 1   MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 60

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           PFKPPK+AFTT+IYHPNINSNGSICLDILRSQWSPALT+SKVLLSICSLLCDPNPDDPLV
Sbjct: 61  PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 120

Query: 121 PEIARIYKTDRDKYNRISREWTQKYAM 147
           P+IA+IYK+D++KYNR +REWTQKYAM
Sbjct: 121 PDIAQIYKSDKEKYNRHAREWTQKYAM 147


>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
           sapiens]
          Length = 118

 Score =  252 bits (644), Expect = 7e-68
 Identities = 116/118 (98%), Positives = 118/118 (100%)

Query: 30  MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 89
           MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL
Sbjct: 1   MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 60

Query: 90  RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
           RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR+KYNRI+REWTQKYAM
Sbjct: 61  RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 118


>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score =  201 bits (511), Expect = 2e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183

Query: 124 ARIYKTDRDKYNRISREWTQKYA 146
           A  Y T+R +++RI+R+WT++YA
Sbjct: 184 ATQYLTNRAEHDRIARQWTKRYA 206


>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
          Length = 207

 Score =  201 bits (511), Expect = 2e-52
 Identities = 94/143 (65%), Positives = 114/143 (79%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F +DYPFK
Sbjct: 64  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 123

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 124 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 183

Query: 124 ARIYKTDRDKYNRISREWTQKYA 146
           A  Y T+R +++RI+R+WT++YA
Sbjct: 184 ATQYLTNRAEHDRIARQWTKRYA 206


>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
          Length = 201

 Score =  199 bits (507), Expect = 5e-52
 Identities = 93/143 (65%), Positives = 113/143 (79%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           KRI KEL+++  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F  DYPFK
Sbjct: 58  KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFK 117

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 118 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 177

Query: 124 ARIYKTDRDKYNRISREWTQKYA 146
           A  Y T+R +++R++R+WT++YA
Sbjct: 178 ATQYMTNRAEHDRMARQWTKRYA 200


>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
           sapiens]
          Length = 193

 Score =  199 bits (507), Expect = 5e-52
 Identities = 93/143 (65%), Positives = 113/143 (79%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           KRI KEL+D+  DPP  CSAGP GD+++ W++TI+GP  S Y+GGVFFL I F  +YPFK
Sbjct: 50  KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFK 109

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
           PPKV F TRIYH NINS G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  I
Sbjct: 110 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 169

Query: 124 ARIYKTDRDKYNRISREWTQKYA 146
           A  Y T+R +++R++R+WT++YA
Sbjct: 170 ATQYMTNRAEHDRMARQWTKRYA 192


>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
           sapiens]
          Length = 176

 Score =  175 bits (444), Expect = 1e-44
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 22  SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 81
           SAGP GD+++ W++TI+GP  S Y+GGVFFL I F  +YPFKPPKV F TRIYH NINS 
Sbjct: 51  SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 110

Query: 82  GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREW 141
           G ICLDIL+  WSPALTISKVLLSICSLL D NP DPLV  IA  Y T+R +++R++R+W
Sbjct: 111 GVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQW 170

Query: 142 TQKYA 146
           T++YA
Sbjct: 171 TKRYA 175


>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
          Length = 152

 Score =  136 bits (343), Expect = 5e-33
 Identities = 67/144 (46%), Positives = 89/144 (61%)

Query: 4   KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
           +RI KE   L  +P     A P   +  ++   I GP DSP++GG F L +  P +YP  
Sbjct: 6   RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA 65

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
            PKV F T+IYHPN++  G ICLDIL+ +WSPAL I  VLLSI +LL  PNPDDPL  ++
Sbjct: 66  APKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125

Query: 124 ARIYKTDRDKYNRISREWTQKYAM 147
           A  +KT+  +    +R WT+ YAM
Sbjct: 126 AEQWKTNEAQAIETARAWTRLYAM 149


>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
           sapiens]
          Length = 152

 Score =  129 bits (324), Expect = 9e-31
 Identities = 56/135 (41%), Positives = 89/135 (65%)

Query: 2   ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
           A +R+ ++   L  DPPA  S  P  +++  W A I GP  +P++ G F LTI F  +YP
Sbjct: 5   ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYP 64

Query: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
            KPP V F ++++HPN+ ++GSICLDIL+++WSP   +S +L SI SLL +PNP+ P   
Sbjct: 65  NKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124

Query: 122 EIARIYKTDRDKYNR 136
           + A++Y+ ++ +Y +
Sbjct: 125 QAAQLYQENKREYEK 139


>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
          Length = 197

 Score =  126 bits (317), Expect = 6e-30
 Identities = 62/146 (42%), Positives = 94/146 (64%), Gaps = 4/146 (2%)

Query: 5   RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
           R+ +EL  LA +PP   +     D M   +A I+G  ++PY+ GVF L +  P  YPF+P
Sbjct: 6   RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEP 65

Query: 65  PKVAFTTRIYHPNINSNGSICLDIL----RSQWSPALTISKVLLSICSLLCDPNPDDPLV 120
           P++ F T IYHPNI+S G ICLD+L    +  W P+L I+ VL SI  L+ +PNPDDPL+
Sbjct: 66  PQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLM 125

Query: 121 PEIARIYKTDRDKYNRISREWTQKYA 146
            +I+  +K ++  + + +R+WT+K+A
Sbjct: 126 ADISSEFKYNKPAFLKNARQWTEKHA 151


>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
          Length = 152

 Score =  126 bits (317), Expect = 6e-30
 Identities = 54/135 (40%), Positives = 87/135 (64%)

Query: 2   ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
           A +R+ ++   L  DPP   S  P  +++  W A I GP  +P++ G F L I F  +YP
Sbjct: 5   ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64

Query: 62  FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
            KPP V F ++++HPN+ ++GSICLDIL+++WSP   +S +L SI SLL +PNP+ P   
Sbjct: 65  NKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANS 124

Query: 122 EIARIYKTDRDKYNR 136
           + A++Y+ ++ +Y +
Sbjct: 125 QAAQLYQENKREYEK 139


>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
           sapiens]
          Length = 165

 Score =  120 bits (301), Expect = 4e-28
 Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 14/157 (8%)

Query: 2   ALKRINKELSDLARDPPAQCSAGPVGDD-MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           ALKR+  E   L  +PP    AGP+ ++  F W+A IMGP D+ ++ GVF   + FP DY
Sbjct: 5   ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 64

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRS-------------QWSPALTISKVLLSIC 107
           P  PPK+ FT  ++HPNI  +G +C+ IL +             +WSP  ++ K+LLS+ 
Sbjct: 65  PLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVV 124

Query: 108 SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQK 144
           S+L +PN +     + +++++ DR+++ +I+++  QK
Sbjct: 125 SMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161


>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
           sapiens]
          Length = 200

 Score =  118 bits (295), Expect = 2e-27
 Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 4/150 (2%)

Query: 1   MALKRINKELSDLARDPPA---QCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 57
           +A++RI +E  ++ +       Q     V ++    +  I GP D+PY+GG + L I  P
Sbjct: 4   IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIP 63

Query: 58  TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 116
             YPF PPKV F T+I+HPNI+S  G+ICLDIL+ QW+ A+T+  VLLS+ +LL    PD
Sbjct: 64  ETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD 123

Query: 117 DPLVPEIARIYKTDRDKYNRISREWTQKYA 146
           DP    +A  YK + + + + +R W   YA
Sbjct: 124 DPQDAVVANQYKQNPEMFKQTARLWAHVYA 153


>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
           sapiens]
          Length = 154

 Score =  114 bits (284), Expect = 4e-26
 Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 3/146 (2%)

Query: 2   ALKRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 60
           A +R+ KEL ++ +          V + ++  WQ  I+ P++ PY  G F + I+FP +Y
Sbjct: 3   ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEY 61

Query: 61  PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
           PFKPPK+ F T+IYHPNI+  G +CL ++ ++ W PA    +V+ S+ +L+ DP P+ PL
Sbjct: 62  PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPL 121

Query: 120 VPEIARIYKTDRDKYNRISREWTQKY 145
             ++A  Y  DR K+ + + E+T+KY
Sbjct: 122 RADLAEEYSKDRKKFCKNAEEFTKKY 147


>gi|13489085 ubiquitin-conjugating enzyme E2G 1 [Homo sapiens]
          Length = 170

 Score =  113 bits (283), Expect = 5e-26
 Identities = 51/141 (36%), Positives = 85/141 (60%), Gaps = 14/141 (9%)

Query: 6   INKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
           + ++L++L ++P    SAG + D D++ W+  I+GP D+ Y+GGVF   + FP DYP +P
Sbjct: 10  LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRP 69

Query: 65  PKVAFTTRIYHPNINSNGSICLDIL-------------RSQWSPALTISKVLLSICSLLC 111
           PK+ F T I+HPN++ NG +C+ IL               +W P  T+  +++S+ S+L 
Sbjct: 70  PKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLA 129

Query: 112 DPNPDDPLVPEIARIYKTDRD 132
           DPN D P   + A+ ++ DR+
Sbjct: 130 DPNGDSPANVDAAKEWREDRN 150


>gi|61175265 ubiquitin-conjugating enzyme E2N-like [Homo sapiens]
          Length = 153

 Score =  113 bits (282), Expect = 7e-26
 Identities = 61/144 (42%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 5   RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPN-DSPYQGGVFFLTIHFPTDYPFK 63
           RI KE   L  +P     A P   +  ++   I G + DSP++GG F   +    +YP  
Sbjct: 7   RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMA 66

Query: 64  PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
            PKV F T+IYHPN++    I LDIL+ +WSPAL I  VLLSI +LL  PNPDDPL  ++
Sbjct: 67  APKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDV 126

Query: 124 ARIYKTDRDKYNRISREWTQKYAM 147
              +KT+  +    +R WT+ YAM
Sbjct: 127 VEQWKTNEAQAIETARAWTRLYAM 150


>gi|112382377 ubiquitin-conjugating enzyme E2S [Homo sapiens]
          Length = 222

 Score =  107 bits (266), Expect = 5e-24
 Identities = 52/141 (36%), Positives = 81/141 (57%)

Query: 3   LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPF 62
           ++ + KE++ L  DPP      P  +D+   Q TI GP  +PY GG+F + +    D+P 
Sbjct: 13  IRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPA 72

Query: 63  KPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPE 122
            PPK  F T+I+HPN+ +NG IC+++L+  W+  L I  VLL+I  LL  PNP+  L  E
Sbjct: 73  SPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEE 132

Query: 123 IARIYKTDRDKYNRISREWTQ 143
             R+   + ++Y   +R  T+
Sbjct: 133 AGRLLLENYEEYAARARLLTE 153


>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
           sapiens]
          Length = 157

 Score =  105 bits (262), Expect = 1e-23
 Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 1   MALKRINKELSDLARDPPA---QCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFP 57
           +A++RI +E  ++ +       Q     V ++    +  I GP D+PY+GG + L I  P
Sbjct: 4   IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIP 63

Query: 58  TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 116
             YPF PPKV F T+I+HPNI+S  G+ICLDIL+ QW+ A+T+  VLLS+ +LL    PD
Sbjct: 64  ETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD 123

Query: 117 DP 118
           DP
Sbjct: 124 DP 125


>gi|33359701 ubiquitin-conjugating enzyme E2G 2 isoform 2 [Homo
           sapiens]
          Length = 137

 Score =  105 bits (262), Expect = 1e-23
 Identities = 45/130 (34%), Positives = 80/130 (61%), Gaps = 13/130 (10%)

Query: 28  DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
           ++ F W+A IMGP D+ ++ GVF   + FP DYP  PPK+ FT  ++HPNI  +G +C+ 
Sbjct: 4   ENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCIS 63

Query: 88  ILRS-------------QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKY 134
           IL +             +WSP  ++ K+LLS+ S+L +PN +     + +++++ DR+++
Sbjct: 64  ILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQF 123

Query: 135 NRISREWTQK 144
            +I+++  QK
Sbjct: 124 YKIAKQIVQK 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,785,464
Number of Sequences: 37866
Number of extensions: 301947
Number of successful extensions: 729
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 79
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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