Guide to the Human Genome
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Name: UBE2N Sequence: fasta or formatted (152aa) NCBI GI: 4507793
Description:

ubiquitin-conjugating enzyme E2N

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         17           2
 C cysteine            0.7          1           1
 D aspartate           5.3          8           2
 E glutamate           7.2         11           2
 F phenylalanine       3.3          5           1
 G glycine             3.9          6           2
 H histidine           1.3          2           1
 I isoleucine          7.2         11           2
 K lysine              5.9          9           1
 L leucine            10.5         16           2
 M methionine          2.6          4           1
 N asparagine          4.6          7           2
 P proline             9.2         14           1
 Q glutamine           3.9          6           1
 R arginine            5.9          9           2
 S serine              3.3          5           1
 T threonine           4.6          7           1
 V valine              4.6          7           2
 W tryptophan          2.0          3           1
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2N 
UBE2NL                0.881   ubiquitin-conjugating enzyme E2N-like 
UBE2T                 0.404   ubiquitin-conjugating enzyme E2T 
UBE2D2                0.396   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2D3                0.393   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2D4                0.393   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.389   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D1                0.386   ubiquitin-conjugating enzyme E2D 1 
UBE2K                 0.382   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2D3                0.379   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2E1                0.368   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2E2                0.368   ubiquitin-conjugating enzyme E2E 2 
UBE2E3                0.368   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.368   ubiquitin-conjugating enzyme E2E 3 
UBE2D2                0.368   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2A                 0.351   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2B                 0.351   ubiquitin-conjugating enzyme E2B 
UBE2E1                0.333   ubiquitin-conjugating enzyme E2E 1 isoform 2 
UBE2K                 0.323   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2C                 0.298   ubiquitin-conjugating enzyme E2C isoform 1 
UBE2S                 0.298   ubiquitin-conjugating enzyme E2S 
UBE2C                 0.288   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2C                 0.288   ubiquitin-conjugating enzyme E2C isoform 4 
UBE2G1                0.263   ubiquitin-conjugating enzyme E2G 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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