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Search of human proteins with 31377846
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377846 WD repeat domain 52 [Homo sapiens]
(982 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377846 WD repeat domain 52 [Homo sapiens] 1992 0.0
gi|223005862 echinoderm microtubule associated protein like 6 [H... 134 3e-31
gi|34485720 echinoderm microtubule associated protein like 5 [Ho... 134 4e-31
gi|223029510 echinoderm microtubule associated protein like 4 is... 87 8e-17
gi|19923497 echinoderm microtubule associated protein like 4 iso... 87 8e-17
gi|56790930 echinoderm microtubule associated protein like 1 iso... 85 3e-16
gi|6912356 echinoderm microtubule associated protein like 2 [Hom... 85 4e-16
gi|56790932 echinoderm microtubule associated protein like 1 iso... 84 6e-16
gi|94681049 hypothetical protein LOC80217 [Homo sapiens] 80 9e-15
gi|22749037 WD repeat domain 65 [Homo sapiens] 77 8e-14
gi|190684671 mitogen-activated protein kinase binding protein 1 ... 62 2e-09
gi|190684677 mitogen-activated protein kinase binding protein 1 ... 62 2e-09
gi|110227615 echinoderm microtubule associated protein like 3 [H... 62 2e-09
gi|94400919 WD repeat domain 90 [Homo sapiens] 62 3e-09
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens] 57 8e-08
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens] 57 8e-08
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 49 2e-05
gi|17975763 myelin transcription factor 1 [Homo sapiens] 49 2e-05
gi|89886480 zinedin isoform 2 [Homo sapiens] 48 5e-05
gi|89886477 zinedin isoform 1 [Homo sapiens] 48 5e-05
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 46 1e-04
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 45 3e-04
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 45 3e-04
gi|118600967 shroom family member 4 [Homo sapiens] 45 3e-04
gi|28274705 family with sequence similarity 9, member A [Homo sa... 45 4e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 45 4e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 45 4e-04
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 44 6e-04
gi|21071067 TBP-associated factor 5 [Homo sapiens] 44 7e-04
gi|46276863 parathymosin [Homo sapiens] 44 7e-04
>gi|31377846 WD repeat domain 52 [Homo sapiens]
Length = 982
Score = 1992 bits (5161), Expect = 0.0
Identities = 982/982 (100%), Positives = 982/982 (100%)
Query: 1 MKEPDDQDTDGEKSVTSKSDGKKSLRSSKSESRSPVQEDNTFLEDDTDETFTKGEGSYLE 60
MKEPDDQDTDGEKSVTSKSDGKKSLRSSKSESRSPVQEDNTFLEDDTDETFTKGEGSYLE
Sbjct: 1 MKEPDDQDTDGEKSVTSKSDGKKSLRSSKSESRSPVQEDNTFLEDDTDETFTKGEGSYLE 60
Query: 61 EDSDEERLEGSLSSFQYGDLQSTTVPQQTPAPAVEEAEEEVKKKISESFFYDYMELASMP 120
EDSDEERLEGSLSSFQYGDLQSTTVPQQTPAPAVEEAEEEVKKKISESFFYDYMELASMP
Sbjct: 61 EDSDEERLEGSLSSFQYGDLQSTTVPQQTPAPAVEEAEEEVKKKISESFFYDYMELASMP 120
Query: 121 FVTLDSNIPLDLLTLVHSFGYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRS 180
FVTLDSNIPLDLLTLVHSFGYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRS
Sbjct: 121 FVTLDSNIPLDLLTLVHSFGYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRS 180
Query: 181 SSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSG 240
SSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSG
Sbjct: 181 SSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSG 240
Query: 241 NLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWE 300
NLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWE
Sbjct: 241 NLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWE 300
Query: 301 MAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGKVLSGSEWGNMLLWEGGLIKVELCRG 360
MAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGKVLSGSEWGNMLLWEGGLIKVELCRG
Sbjct: 301 MAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGKVLSGSEWGNMLLWEGGLIKVELCRG 360
Query: 361 TSKSCHNGPINQIMLYEGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVD 420
TSKSCHNGPINQIMLYEGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVD
Sbjct: 361 TSKSCHNGPINQIMLYEGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVD 420
Query: 421 KNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIEAVAVSP 480
KNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIEAVAVSP
Sbjct: 421 KNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIEAVAVSP 480
Query: 481 LTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVV 540
LTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVV
Sbjct: 481 LTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVV 540
Query: 541 RILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVF 600
RILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVF
Sbjct: 541 RILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVF 600
Query: 601 FFEVERDYKPIGYINTPGPVCQLMWSPMSHPESTLLIICENGYILEAPLPTIKQEEDDHD 660
FFEVERDYKPIGYINTPGPVCQLMWSPMSHPESTLLIICENGYILEAPLPTIKQEEDDHD
Sbjct: 601 FFEVERDYKPIGYINTPGPVCQLMWSPMSHPESTLLIICENGYILEAPLPTIKQEEDDHD 660
Query: 661 VVSYEIKDMCIKCFHFSSVKSKILRLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEK 720
VVSYEIKDMCIKCFHFSSVKSKILRLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEK
Sbjct: 661 VVSYEIKDMCIKCFHFSSVKSKILRLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEK 720
Query: 721 EFQEEEEEKEEEEEEEEPLPEIFIPSTPSPILCGFYSEPGKFWVSLGGYDSGFLYHCEFP 780
EFQEEEEEKEEEEEEEEPLPEIFIPSTPSPILCGFYSEPGKFWVSLGGYDSGFLYHCEFP
Sbjct: 721 EFQEEEEEKEEEEEEEEPLPEIFIPSTPSPILCGFYSEPGKFWVSLGGYDSGFLYHCEFP 780
Query: 781 PCDESSDFKEQKDEPIDVRYLADTEDNPIQTITFNINKVMMFCGMKNGAIRVYVLNQNDP 840
PCDESSDFKEQKDEPIDVRYLADTEDNPIQTITFNINKVMMFCGMKNGAIRVYVLNQNDP
Sbjct: 781 PCDESSDFKEQKDEPIDVRYLADTEDNPIQTITFNINKVMMFCGMKNGAIRVYVLNQNDP 840
Query: 841 SLTSLVDYWHFNMHDNNYGCIKSIANSFDDRFLVTAGADGNIFVFNIFSEFMLRKDMKAK 900
SLTSLVDYWHFNMHDNNYGCIKSIANSFDDRFLVTAGADGNIFVFNIFSEFMLRKDMKAK
Sbjct: 841 SLTSLVDYWHFNMHDNNYGCIKSIANSFDDRFLVTAGADGNIFVFNIFSEFMLRKDMKAK 900
Query: 901 VPSPRFGIETEPIPEDIEDPKAYSIENARRKREHDKLMKEVGEIKARKREQIKALRSEFC 960
VPSPRFGIETEPIPEDIEDPKAYSIENARRKREHDKLMKEVGEIKARKREQIKALRSEFC
Sbjct: 901 VPSPRFGIETEPIPEDIEDPKAYSIENARRKREHDKLMKEVGEIKARKREQIKALRSEFC 960
Query: 961 NLLEMNEKLPKHMQFKRTVSLI 982
NLLEMNEKLPKHMQFKRTVSLI
Sbjct: 961 NLLEMNEKLPKHMQFKRTVSLI 982
>gi|223005862 echinoderm microtubule associated protein like 6 [Homo
sapiens]
Length = 1958
Score = 134 bits (338), Expect = 3e-31
Identities = 132/547 (24%), Positives = 236/547 (43%), Gaps = 76/547 (13%)
Query: 118 SMPFVTLDSNIPLDLLTL--VHSF-GYDCRKRANLQLLDDSIAIY-IAGNQLIFLNLKTK 173
++PF+ + P D L L +H + GYDCR NL +Y IA +++ +
Sbjct: 663 AVPFLKREK-APEDSLKLQFIHGYRGYDCRN--NLFYTQAGEVVYHIAAVAVVYNRQQHS 719
Query: 174 EQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAY 233
+++YL + I + +HP K Y + G I +++ +L+ +L+ ++G
Sbjct: 720 QRLYL--GHDDDILSLTIHPVKDYVATGQVGRDAAIHVWDTQTLKCLSLLKGQHQRGVCA 777
Query: 234 VDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGS 293
+DF+ G L SVG + +++ W+WK+ + I T+ ++F V NP ++L T G
Sbjct: 778 LDFSADGKCLVSVGLDDFHSIVFWDWKKGEKIATTRGHKDKIFVVKCNPHHVDKLVTVGI 837
Query: 294 GHIKFWEMA---FTFTGLKLQGSLGRFGKTITTDIEGYMELPDGKVLSGSEWGNMLLWEG 350
HIKFW+ A FT +G+ G GK T Y + D V SG+ G++ +W+
Sbjct: 838 KHIKFWQQAGGGFT----SKRGTFGSVGKLETMMCVSYGRMED-LVFSGAATGDIFIWKD 892
Query: 351 GLIKVELCRGTSKSCHNGPINQIMLYEGEVITVGSDGYVRIWD--FETIDTADVIDETGL 408
L+ + H+GP+ + + +T G DG V +WD FE I + L
Sbjct: 893 ILLL------KTVKAHDGPVFAMYALDKGFVTGGKDGIVELWDDMFERCLKTYAIKRSAL 946
Query: 409 LEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLF-- 466
L+ + ++ ++ G+ L NG I ++D S P L
Sbjct: 947 STSSKGLLLEDNPSIRAITL------GHGHILVGTKNGEILEIDKS------GPMTLLVQ 994
Query: 467 SFHSGAIEAVAVSPLTYLMATTALDCSVRIYDF-ASKTPLAQMKFKQGGTALVWVPRMVN 525
G + +A PL + AT + D ++RI++ A LA K K+GG + P
Sbjct: 995 GHMEGEVWGLAAHPLLPICATVSDDKTLRIWELSAQHRMLAVRKLKKGGRCCAFSP---- 1050
Query: 526 FTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQ---------------- 569
G + VG DG ++ + + F RK+++ +DI+ +
Sbjct: 1051 -DGKALAVGLNDGSFLVVNADTVEDMVSFHHRKEMI-SDIKFSKDTGKYLAVASHDNFVD 1108
Query: 570 -----------VFKPHTACVTALAYERDGEILATGSKDQTVFFFEVERDYKPIGYINTPG 618
+ K ++ +T + ++ G++L S + FFE R + +I P
Sbjct: 1109 IYNVLTSKRVGICKGASSYITHIDWDSRGKLLQVNSGAREQLFFEAPRGKR---HIIRPS 1165
Query: 619 PVCQLMW 625
+ ++ W
Sbjct: 1166 EIEKIEW 1172
Score = 122 bits (306), Expect = 2e-27
Identities = 115/490 (23%), Positives = 204/490 (41%), Gaps = 82/490 (16%)
Query: 140 GYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFT 199
G+ CR + ++AG +++ + ++ +L + I + +HP KT
Sbjct: 21 GHQCRNNL-YYTAGKEVVYFVAGVGVVYNTREHSQKFFL--GHNDDIISLALHPDKTLVA 77
Query: 200 VAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNW 259
+ G P I I++ +++ +L+D G A + F+ G LASVG + T+ IW+W
Sbjct: 78 TGQVGKEPYICIWDSYNVQTVSLLKDVHTHGVACLAFDSDGQRLASVGLDAKNTVCIWDW 137
Query: 260 KEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQGSLGRFGK 319
++ + + S +F ++++P + ++ + G HIKFW T G L G FGK
Sbjct: 138 RKGKLLASATGHSDRIFDISWDPYQPNRVVSCGVKHIKFW----TLCGNALTAKRGIFGK 193
Query: 320 TITTDIEGYMELPDGK---VLSGSEWGNMLLWEGGLIKVELCRGTSKSCHNGPINQIMLY 376
T D++ + L K SG+ G++ +W+G + L R T + H+ I +
Sbjct: 194 --TGDLQTILCLACAKEDITYSGALNGDIYVWKG----LNLVR-TIQGAHSAGIFSMYAC 246
Query: 377 EGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGN 436
E T G DG +R+WD + +PI ++ ++ E G
Sbjct: 247 EEGFATGGRDGCIRLWD---------------TDFKPITKID----------LRETEQG- 280
Query: 437 NFWLAQDANGAIWKLDLSFSNITQDPE--------------CLFSFHSGAIEAVAVSPLT 482
+ WK D + TQD E L G + A+A+ P
Sbjct: 281 --YKGLSIRSVCWKADRLLAG-TQDSEIFEVIVRERDKPMLILQGHCEGELWALALHPKK 337
Query: 483 YLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVVRI 542
L T + D SVR++ A +A+ ++ ++ + P G+Q+ +G +DG +
Sbjct: 338 PLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVAFSP-----DGSQLALGMKDGSFIV 392
Query: 543 LELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVFFF 602
L + D + RK++ + + + DG LA GS D V +
Sbjct: 393 LRVRDMTEVVHIKDRKEV-----------------IHEMKFSPDGSYLAVGSNDGPVDVY 435
Query: 603 EVERDYKPIG 612
V + YK IG
Sbjct: 436 AVAQRYKKIG 445
Score = 114 bits (286), Expect = 3e-25
Identities = 145/613 (23%), Positives = 253/613 (41%), Gaps = 86/613 (14%)
Query: 38 EDNTFLEDDTDETFTKGEGSYLEEDSDEERLEGSLSSFQYG--DLQSTTVPQQTPAPAVE 95
+++ ++ + +T + +G Y + + E+ ++ + + +++ T QQ +VE
Sbjct: 1274 QESKLVDSEESDTDVEEDGGYDSDVAREKAIDYTTKIYAVSIREMEGTKPHQQLKEVSVE 1333
Query: 96 EAEEEVKKKISESFFYDYMELASMPFVTLDSNIP-----LDLLTLVHSFGY---DCRKRA 147
E + +S + A P +NI ++ L L H FGY DCR
Sbjct: 1334 E-----RPPVSRA--------APQPEKLQKNNITKKKKLVEELALDHVFGYRGFDCRN-- 1378
Query: 148 NLQLLDDSI-AIYIAGNQLIFLNLKTKEQ-IYLRSSSGEGIGVIGVHP-HKTYFTVAEKG 204
NL L+D I+ I NL T Q YL + + HP ++ ++ G
Sbjct: 1379 NLHYLNDGADIIFHTAAAGIVQNLSTGSQSFYLEHTDDILCLTVNQHPKYRNVVATSQIG 1438
Query: 205 SFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQP 264
+ P I I++ + +LR KG Y++F+ +G LL SVG +P++T+T+W W+E
Sbjct: 1439 TTPSIHIWDAMTKHTLSMLRCFHSKGVNYINFSATGKLLVSVGVDPEHTITVWRWQEGAK 1498
Query: 265 ILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQGSLGRFGKTITTD 324
+ + +F V F PD + Q + G H+KFW +A + L +G +G G
Sbjct: 1499 VASRGGHLERIFVVEFRPDSDTQFVSVGVKHMKFWTLAGSAL-LYKKGVIGSLGAAKMQT 1557
Query: 325 IEGYMELPDGKVLSGSEWGNMLLWEGGLIKVELCRGTSKSCHNGPINQI--MLYEGEVIT 382
+ + +G+ G++ +W+ L R +K+ H GP+ + L +G ++T
Sbjct: 1558 MLSVAFGANNLTFTGAINGDVYVWKDHF----LIRLVAKA-HTGPVFTMYTTLRDGLIVT 1612
Query: 383 VGSD------GYVRIWDFETIDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGN 436
G + G V++WD E ETG L +E + + K I +
Sbjct: 1613 GGKERPTKEGGAVKLWDQEMKRCRAFQLETGQL-VECVRSVCRGK-----GKILVGTKDG 1666
Query: 437 NFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIEAVAVSPLTYLMATTALDCSVRI 496
+ N A SNI D G I +A P L + + D + RI
Sbjct: 1667 EIIEVGEKNAA--------SNILID-----GHMEGEIWGLATHPSKDLFISASNDGTARI 1713
Query: 497 YDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFAG 556
+D A K L ++ + P G + +G ++G IL + K G
Sbjct: 1714 WDLADKKLLNKVSLGHAARCAAYSP-----DGEMVAIGMKNGEFVILLVNSLK----VWG 1764
Query: 557 RKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVFFFEVER--DYKPIGYI 614
+K+ + IQ + D LA GS + TV F+++ + + IGY
Sbjct: 1765 KKRDRKSAIQ-------------DIRISPDNRFLAVGSSEHTVDFYDLTQGTNLNRIGYC 1811
Query: 615 -NTPGPVCQLMWS 626
+ P V Q+ +S
Sbjct: 1812 KDIPSFVIQMDFS 1824
>gi|34485720 echinoderm microtubule associated protein like 5 [Homo
sapiens]
Length = 1977
Score = 134 bits (337), Expect = 4e-31
Identities = 132/512 (25%), Positives = 223/512 (43%), Gaps = 66/512 (12%)
Query: 133 LTLVHSF-GYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGV 191
L VH + GYDCR + + I ++A +I+ + ++ YL + I + +
Sbjct: 679 LHFVHGYRGYDCRSNLFYTQIGE-IVYHVAAVGVIYNRQQNTQRFYL--GHDDDILCLTI 735
Query: 192 HPHKTYFTVAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPD 251
HP K Y + G P I I++ +++P +L+ + G + VDF+ G LASVG +
Sbjct: 736 HPLKDYVATGQVGRDPSIHIWDTETIKPLSILKGHHQYGVSAVDFSADGKRLASVGIDDS 795
Query: 252 YTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQ 311
+T+ +W+WK+ + + + ++F V NP ++L T+G H+KFW A + +
Sbjct: 796 HTVVLWDWKKGEKLSIARGSKDKIFVVKMNPYVPDKLITAGIKHMKFWRKAGGGL-IGRK 854
Query: 312 GSLGRFGK--TITTDIEGYMELPDGKVLSGSEWGNMLLWEGGLIKVELCRGTSKSCHNGP 369
G +G GK T+ + G+ E SG+ G++ +W ++ + H+GP
Sbjct: 855 GYIGTLGKNDTMMCAVYGWTE---EMAFSGTSTGDVCIWR------DIFLVKTVKAHDGP 905
Query: 370 INQIMLYEGEVITVGSDGYVRIWD--FETIDTADVIDETGLLEIEPINELQVDKNVNLFS 427
+ + E +T G DG V +WD FE I L L+ + ++ S
Sbjct: 906 VFSMHALEKGFVTGGKDGIVALWDDSFERCLKTYAIKRAALAPGSKGLLLEDNPSIRAIS 965
Query: 428 MIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFH-SGAIEAVAVSPLTYLMA 486
+ G+ L NG I ++D S IT L H G + +A P + A
Sbjct: 966 L------GHGHILVGTKNGEILEVDKS-GPIT----LLVQGHMEGEVWGLATHPYLPICA 1014
Query: 487 TTALDCSVRIYDFA-SKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVVRILEL 545
T + D ++RI+D + S LA K K+GG + P G + VG DG +
Sbjct: 1015 TVSDDKTLRIWDLSPSHCMLAVRKLKKGGRCCCFSP-----DGKALAVGLNDGSFLMANA 1069
Query: 546 YDPKGLTIFAGRKKIL------------------DADIQLKQVF--------KPHTACVT 579
+ L F RK ++ D+ I + V K T+ +T
Sbjct: 1070 DTLEDLVSFHHRKDMISDIRFSPGSGKYLAVASHDSFIDIYNVMSSKRVGICKGATSYIT 1129
Query: 580 ALAYERDGEILA--TGSKDQTVFFFEVERDYK 609
+ ++ G++L TG+K+Q FFE R K
Sbjct: 1130 HIDWDIRGKLLQVNTGAKEQ--LFFEAPRGKK 1159
Score = 112 bits (279), Expect = 2e-24
Identities = 113/477 (23%), Positives = 198/477 (41%), Gaps = 56/477 (11%)
Query: 140 GYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFT 199
G+ CR + I ++AG +++ + +++ Y S + I + +HP +
Sbjct: 21 GHQCRNNLYYTAAKE-IVYFVAGVGVVYSPREHRQKFYRGHS--DDIISLALHPERVLVA 77
Query: 200 VAEKGSFPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNW 259
+ G P I I++ +++ VL+D G A + F+ G L SVG + + +W+W
Sbjct: 78 TGQVGKEPYICIWDSYTVQTISVLKDVHTHGIACLAFDLDGQRLVSVGLDSKNAVCVWDW 137
Query: 260 KEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQGSLGRFGK 319
K + + + +F ++++ + +L + G HIKFW + G L G FGK
Sbjct: 138 KRGKMLSMAPGHTDRIFDISWDLYQPNKLVSCGVKHIKFWSLC----GNALTPKRGVFGK 193
Query: 320 TITTDIEGYMELP---DGKVLSGSEWGNMLLWEGGLIKVELCRGTSKSCHNGPINQIMLY 376
T D++ + L D SG+ G++ +W+G + L R T + H I +
Sbjct: 194 T--GDLQTILCLACARDELTYSGALNGDIYVWKG----INLIR-TIQGAHAAGIFSMNAC 246
Query: 377 EGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGN 436
E T G DG +R+WD T VID + D+ S+ + G+
Sbjct: 247 EEGFATGGRDGCIRLWDL-TFKPITVIDLR-----------ETDQGYKGLSVRSVCWRGD 294
Query: 437 NFWLAQDANGAIWKLDLSFSNITQDPECLFSFH-SGAIEAVAVSPLTYLMATTALDCSVR 495
+ L + I+++ + N P + H G + A+AV P L T + D SVR
Sbjct: 295 HI-LVGTQDSEIFEIVVQERN---KPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVR 350
Query: 496 IYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFA 555
I+ +A+ ++ VN G + +G +DG +L + D +
Sbjct: 351 IWSLVDHALIARCNMEEPIRCAA-----VNADGIHLALGMKDGSFTVLRVRDMTEVVHIK 405
Query: 556 GRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVFFFEVERDYKPIG 612
RK+ + L Y DG LA G D +V + V + YK +G
Sbjct: 406 DRKE-----------------AIHELKYSPDGTYLAVGCNDSSVDIYGVAQRYKKVG 445
Score = 105 bits (261), Expect = 3e-22
Identities = 115/501 (22%), Positives = 200/501 (39%), Gaps = 78/501 (15%)
Query: 129 PLDLLTLVHSFGY---DCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEG 185
P++ L L FGY DCR + L D IY + I N+ T Q + + + +
Sbjct: 1367 PIEDLVLELIFGYRGRDCRNNVHY-LNDGDDIIYHTASVGILHNVATGSQSFYQEHNDD- 1424
Query: 186 IGVIGVHPHKTYFTVAEKGSF----------PDIIIYEYPSLRPYRVLRDGTEKGYAYVD 235
I + V+ H + + G P I I++ + + +LR KG V
Sbjct: 1425 ILCLTVNQHPKFINIVATGQVGDSADMSATAPSIHIWDAMNKQTLSILRCYHSKGVCSVS 1484
Query: 236 FNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGH 295
F+ +G LL SVG +P++T+TIW W+E I +Q +F F PD + Q + G H
Sbjct: 1485 FSATGKLLLSVGLDPEHTITIWRWQEGAKIASRAGHNQRIFVAEFRPDSDTQFVSVGVKH 1544
Query: 296 IKFWEMAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGK---VLSGSEWGNMLLWEGGL 352
+KFW T G L G ++ + + G +G+ G++ +W+ +
Sbjct: 1545 VKFW----TLAGRALLSKKGLLSTLEDARMQTMLAIAFGANNLTFTGTISGDVCVWKDHI 1600
Query: 353 IKVELCRGTSKSCHNGPINQI--MLYEGEVITVGSD------GYVRIWDFETIDTADVID 404
LCR +++ HNGP+ + L +G ++T G + G V++WD E
Sbjct: 1601 ----LCRIVARA-HNGPVFAMYTTLRDGLIVTGGKERPSKEGGAVKLWDQELRRCRAFRL 1655
Query: 405 ETGLLEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPEC 464
ETG ++ G L N I +++ N +
Sbjct: 1656 ETG----------------QATDCVRSVCRGKGKILVGTRNAEI--IEVGEKNAACN--I 1695
Query: 465 LFSFH-SGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRM 523
L + H G I +A P + A D +VR++D A K L ++ + + P
Sbjct: 1696 LVNGHVDGPIWGLATHPSRDFFLSAAEDGTVRLWDIADKKMLNKVNLGHAARTVCYSPE- 1754
Query: 524 VNFTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAY 583
G + +G ++G IL L + +++ + + + +
Sbjct: 1755 ----GDMVAIGMKNGEFIIL-----------------LVSSLKIWGKKRDRRCAIHDIRF 1793
Query: 584 ERDGEILATGSKDQTVFFFEV 604
D LA GS + +V F+++
Sbjct: 1794 SPDSRYLAVGSSENSVDFYDL 1814
>gi|223029510 echinoderm microtubule associated protein like 4
isoform b [Homo sapiens]
Length = 923
Score = 87.0 bits (214), Expect = 8e-17
Identities = 123/578 (21%), Positives = 220/578 (38%), Gaps = 108/578 (18%)
Query: 126 SNIPLDLLTLVHSFGY---DCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSS 182
+ +P + L L ++GY DCR AN+ LL +Y + ++ N + + Q + +
Sbjct: 194 TELPPEKLKLEWAYGYRGKDCR--ANVYLLPTGEIVYFIASVVVLFNYEERTQRHYLGHT 251
Query: 183 GEGIGVIGVHPHKTYFTVAEKGSF--------PDIIIYEYPSLRPYRVLRDGT-EKGYAY 233
+ + + +HP K + P + +++ +L +++ GT E+G
Sbjct: 252 -DCVKCLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQIIGLGTFERGVGC 310
Query: 234 VDFNY--SGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTS 291
+DF+ SG L + + ++ LT+W+W+++ K ++ V V F+P + T
Sbjct: 311 LDFSKADSGVHLCVIDDSNEHMLTVWDWQKKAKGAEIKTTNEVVLAVEFHPTDANTIITC 370
Query: 292 GSGHIKFWEMAFTFTGLKLQGSLGRFGKTITTD-IEGYMELPDGKVLSGSEWGNMLLWEG 350
G HI FW T++G L G FGK ++ L +G VL+G G ML+W
Sbjct: 371 GKSHIFFW----TWSGNSLTRKQGIFGKYEKPKFVQCLAFLGNGDVLTGDSGGVMLIW-- 424
Query: 351 GLIKVELCRGTSKSCHNGPINQIMLYEGEVITV------------GSDGYVRIWDFETID 398
VE G QI ++G V T+ G D + +WD +
Sbjct: 425 SKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDHDLNP 484
Query: 399 TADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNI 458
++ I + E + D+ + T NF L N
Sbjct: 485 EREIEVPDQYGTIRAVAEGKADQ--------FLVGTSRNFILRGTFNDGF---------- 526
Query: 459 TQDPECLFSFHSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALV 518
+ H+ + +A P L+ T A D V +++ M+ + T LV
Sbjct: 527 ----QIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWN--------SMEHRLEWTRLV 574
Query: 519 WVP-RMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQ-LKQVFKPHTA 576
P +F + +V + +GR +LDA+ + L +
Sbjct: 575 DEPGHCADFHPSGTVV----------------AIGTHSGRWFVLDAETRDLVSIHTDGNE 618
Query: 577 CVTALAYERDGEILATGSKDQTVFFFEVE---RDYKPIGYINTPGP-VCQLMWSPMSHPE 632
++ + Y DG LA GS D ++ + V R Y G + L WSP
Sbjct: 619 QLSVMRYSIDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSP----- 673
Query: 633 STLLIICENGYILEAPLPTIKQEEDDHDVVSYEIKDMC 670
+N YI+ D++++ ++I + C
Sbjct: 674 -------DNKYIM--------SNSGDYEILYWDIPNGC 696
>gi|19923497 echinoderm microtubule associated protein like 4
isoform a [Homo sapiens]
Length = 981
Score = 87.0 bits (214), Expect = 8e-17
Identities = 123/578 (21%), Positives = 220/578 (38%), Gaps = 108/578 (18%)
Query: 126 SNIPLDLLTLVHSFGY---DCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSS 182
+ +P + L L ++GY DCR AN+ LL +Y + ++ N + + Q + +
Sbjct: 252 TELPPEKLKLEWAYGYRGKDCR--ANVYLLPTGEIVYFIASVVVLFNYEERTQRHYLGHT 309
Query: 183 GEGIGVIGVHPHKTYFTVAEKGSF--------PDIIIYEYPSLRPYRVLRDGT-EKGYAY 233
+ + + +HP K + P + +++ +L +++ GT E+G
Sbjct: 310 -DCVKCLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQIIGLGTFERGVGC 368
Query: 234 VDFNY--SGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTS 291
+DF+ SG L + + ++ LT+W+W+++ K ++ V V F+P + T
Sbjct: 369 LDFSKADSGVHLCVIDDSNEHMLTVWDWQKKAKGAEIKTTNEVVLAVEFHPTDANTIITC 428
Query: 292 GSGHIKFWEMAFTFTGLKLQGSLGRFGKTITTD-IEGYMELPDGKVLSGSEWGNMLLWEG 350
G HI FW T++G L G FGK ++ L +G VL+G G ML+W
Sbjct: 429 GKSHIFFW----TWSGNSLTRKQGIFGKYEKPKFVQCLAFLGNGDVLTGDSGGVMLIW-- 482
Query: 351 GLIKVELCRGTSKSCHNGPINQIMLYEGEVITV------------GSDGYVRIWDFETID 398
VE G QI ++G V T+ G D + +WD +
Sbjct: 483 SKTTVEPTPGKGPKGVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDHDLNP 542
Query: 399 TADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNI 458
++ I + E + D+ + T NF L N
Sbjct: 543 EREIEVPDQYGTIRAVAEGKADQ--------FLVGTSRNFILRGTFNDGF---------- 584
Query: 459 TQDPECLFSFHSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALV 518
+ H+ + +A P L+ T A D V +++ M+ + T LV
Sbjct: 585 ----QIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWN--------SMEHRLEWTRLV 632
Query: 519 WVP-RMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQ-LKQVFKPHTA 576
P +F + +V + +GR +LDA+ + L +
Sbjct: 633 DEPGHCADFHPSGTVV----------------AIGTHSGRWFVLDAETRDLVSIHTDGNE 676
Query: 577 CVTALAYERDGEILATGSKDQTVFFFEVE---RDYKPIGYINTPGP-VCQLMWSPMSHPE 632
++ + Y DG LA GS D ++ + V R Y G + L WSP
Sbjct: 677 QLSVMRYSIDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSP----- 731
Query: 633 STLLIICENGYILEAPLPTIKQEEDDHDVVSYEIKDMC 670
+N YI+ D++++ ++I + C
Sbjct: 732 -------DNKYIM--------SNSGDYEILYWDIPNGC 754
>gi|56790930 echinoderm microtubule associated protein like 1
isoform b [Homo sapiens]
Length = 815
Score = 85.1 bits (209), Expect = 3e-16
Identities = 124/609 (20%), Positives = 229/609 (37%), Gaps = 85/609 (13%)
Query: 29 KSESRSPVQEDNTFLEDDTDETFTKGEGSYLEEDSDEERLEGSLSSFQYGDLQSTTVPQQ 88
+ E+ P + N ++ G + GS SS G S + P++
Sbjct: 118 RKETAVPATKSNIKRTSSSERVSPGGRRESNGDSRGNRNRTGSTSSSSSGKKNSESKPKE 177
Query: 89 TPAPAVEEAEEEVKKKISESFFYDYMELASMPFVTLDSNI--PLDLLTLVHSFGY---DC 143
P E VK + YM + +L++ + P L L +GY DC
Sbjct: 178 ---PVFSAEEGYVKMFLRGRPVTMYMPKDQVDSYSLEAKVELPTKRLKLEWVYGYRGRDC 234
Query: 144 RKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAE- 202
R NL LL +Y + ++ N++ + Q + + + + + VHP + +
Sbjct: 235 RN--NLYLLPTGETVYFIASVVVLYNVEEQLQRHY-AGHNDDVKCLAVHPDRITIATGQV 291
Query: 203 -------KGSFPDIIIYEYPSLRPYRVLRDGT-EKGYAYVDFNYS--GNLLASVGSNPDY 252
K P + I++ +L V+ G ++ + F+ S G L +V + D+
Sbjct: 292 AGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFSKSNGGTNLCAVDDSNDH 351
Query: 253 TLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQG 312
L++W+W++E+ + K ++ VF F+P + T G H+ FW T G L
Sbjct: 352 VLSVWDWQKEEKLADVKCSNEAVFAADFHPTDTNIIVTCGKSHLYFW----TLEGSSLNK 407
Query: 313 SLGRFGKTITTDIEGYMELPD-GKVLSGSEWGNMLLWEGGLIKVELCRGTSKSCHNGPIN 371
G F K + + G ++G GN+L+W G ++ + H G I
Sbjct: 408 KQGLFEKQEKPKFVLCVTFSENGDTITGDSSGNILVWGKGTNRISY---AVQGAHEGGIF 464
Query: 372 QI-MLYEGEVIT-VGSDGYVRIW--DFETIDTADVIDETGLLEIEPINELQVDKNVNLFS 427
+ ML +G +++ G D + W +++ + ++ ++ G PI + K
Sbjct: 465 ALCMLRDGTLVSGGGKDRKLISWSGNYQKLRKTEIPEQFG-----PIRTVAEGK-----G 514
Query: 428 MIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIEAVAVSPLTYLMAT 487
+ + T NF L +G F+ ITQ H+ + +A+ T
Sbjct: 515 DVILIGTTRNFVLQGTLSG-------DFTPITQG-------HTDELWGLAIHASKSQFLT 560
Query: 488 TALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVVRILELYD 547
D ++D P+ + + + P +G+ + VG
Sbjct: 561 CGHDKHATLWDAVGHRPVWDKIIEDPAQSSGFHP-----SGSVVAVG------------- 602
Query: 548 PKGLTIFAGRKKILDADIQ-LKQVFKPHTACVTALAYERDGEILATGSKDQTVFFFEVE- 605
GR + D + + L V ++ + Y DG LA GS D ++ + V
Sbjct: 603 -----TLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSPDGNFLAIGSHDNCIYIYGVSD 657
Query: 606 --RDYKPIG 612
R Y +G
Sbjct: 658 NGRKYTRVG 666
>gi|6912356 echinoderm microtubule associated protein like 2 [Homo
sapiens]
Length = 649
Score = 84.7 bits (208), Expect = 4e-16
Identities = 125/543 (23%), Positives = 213/543 (39%), Gaps = 99/543 (18%)
Query: 115 ELASMPFVTLDSNIPLDLLTLVHSFGY---DCRKRANLQLLDDSIAIYIAGNQLIFLNLK 171
ELA + S +P L L +GY DCR ANL LL +Y + + +++
Sbjct: 37 ELAPTYSLDTRSELPSCRLKLEWVYGYRGRDCR--ANLYLLPTGEIVYFVASVAVLYSVE 94
Query: 172 TKEQIYLRSSSGEGIGVIGVHPHKTYFTVAE--------KGSFPDIIIYEYPSLRPYRVL 223
+ Q + + + I + +HP + K P + I++ SL VL
Sbjct: 95 EQRQRHYLGHNDD-IKCLAIHPDMVTIATGQVAGTTKEGKPLPPHVRIWDSVSLSTLHVL 153
Query: 224 RDGT-EKGYAYVDFNYS--GNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTF 280
G ++ V F+ S GNLL +V + D+ L++W+W +E ++ K ++ V TF
Sbjct: 154 GLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDWAKETKVVDVKCSNEAVLVATF 213
Query: 281 NPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQGSLGRFGK-------TITTDIEGYMELPD 333
+P L T G HI FW T G L G F K T +EG
Sbjct: 214 HPTDPTVLITCGKSHIYFW----TLEGGSLSKRQGLFEKHEKPKYVLCVTFLEG------ 263
Query: 334 GKVLSGSEWGNMLLW-EGGLIKVELCRGTSKSCHNGPI-NQIMLYEGEVITVGS-DGYVR 390
G V++G GN+ +W +GG + G H+G + L +G +++ G D V
Sbjct: 264 GDVVTGDSGGNLYVWGKGGNRITQAVLG----AHDGGVFGLCALRDGTLVSGGGRDRRVV 319
Query: 391 IW--DFETIDTADVIDETG-----------LLEIEPINELQVDKNVNL-FSMIKMNETGN 436
+W D+ + +V ++ G L + + +V+ FS++
Sbjct: 320 LWGSDYSKLQEVEVPEDFGPVRTVAEGHGDTLYVGTTRNSILQGSVHTGFSLLVQGHVEE 379
Query: 437 NFWLA------------QDANGAIWKLDLS---FSNITQDPECLFSFH-SGAIEAVAVSP 480
+ LA QD +W D +S I +DP FH SG++ AV
Sbjct: 380 LWGLATHPSRAQFVTCGQDKLVHLWSSDSHQPLWSRIIEDPARSAGFHPSGSVLAVGTVT 439
Query: 481 LTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGVV 540
+L+ T V I+ ++ ++ + F GA + VG D +V
Sbjct: 440 GRWLLLDTETHDLVAIHTDGNE-QISVVSFSP--------------DGAYLAVGSHDNLV 484
Query: 541 RILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILATGSKDQTVF 600
+ T+ G +K + H++ +T L + +D T S D +
Sbjct: 485 YV--------YTVDQGGRK-----VSRLGKCSGHSSFITHLDWAQDSSCFVTNSGDYEIL 531
Query: 601 FFE 603
+++
Sbjct: 532 YWD 534
>gi|56790932 echinoderm microtubule associated protein like 1
isoform a [Homo sapiens]
Length = 834
Score = 84.0 bits (206), Expect = 6e-16
Identities = 120/568 (21%), Positives = 219/568 (38%), Gaps = 85/568 (14%)
Query: 70 GSLSSFQYGDLQSTTVPQQTPAPAVEEAEEEVKKKISESFFYDYMELASMPFVTLDSNI- 128
GS SS G S + P++ P E VK + YM + +L++ +
Sbjct: 178 GSTSSSSSGKKNSESKPKE---PVFSAEEGYVKMFLRGRPVTMYMPKDQVDSYSLEAKVE 234
Query: 129 -PLDLLTLVHSFGY---DCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGE 184
P L L +GY DCR NL LL +Y + ++ N++ + Q + + +
Sbjct: 235 LPTKRLKLEWVYGYRGRDCRN--NLYLLPTGETVYFIASVVVLYNVEEQLQRHY-AGHND 291
Query: 185 GIGVIGVHPHKTYFTVAE--------KGSFPDIIIYEYPSLRPYRVLRDGT-EKGYAYVD 235
+ + VHP + + K P + I++ +L V+ G ++ +
Sbjct: 292 DVKCLAVHPDRITIATGQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIA 351
Query: 236 FNYS--GNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGS 293
F+ S G L +V + D+ L++W+W++E+ + K ++ VF F+P + T G
Sbjct: 352 FSKSNGGTNLCAVDDSNDHVLSVWDWQKEEKLADVKCSNEAVFAADFHPTDTNIIVTCGK 411
Query: 294 GHIKFWEMAFTFTGLKLQGSLGRFGKTITTDIEGYMELPD-GKVLSGSEWGNMLLWEGGL 352
H+ FW T G L G F K + + G ++G GN+L+W G
Sbjct: 412 SHLYFW----TLEGSSLNKKQGLFEKQEKPKFVLCVTFSENGDTITGDSSGNILVWGKGT 467
Query: 353 IKVELCRGTSKSCHNGPINQI-MLYEGEVIT-VGSDGYVRIW--DFETIDTADVIDETGL 408
++ + H G I + ML +G +++ G D + W +++ + ++ ++ G
Sbjct: 468 NRISY---AVQGAHEGGIFALCMLRDGTLVSGGGKDRKLISWSGNYQKLRKTEIPEQFG- 523
Query: 409 LEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSF 468
PI + K + + T NF L +G F+ ITQ
Sbjct: 524 ----PIRTVAEGK-----GDVILIGTTRNFVLQGTLSG-------DFTPITQG------- 560
Query: 469 HSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTG 528
H+ + +A+ T D ++D P+ + + + P +G
Sbjct: 561 HTDELWGLAIHASKSQFLTCGHDKHATLWDAVGHRPVWDKIIEDPAQSSGFHP-----SG 615
Query: 529 AQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQ-LKQVFKPHTACVTALAYERDG 587
+ + VG GR + D + + L V ++ + Y DG
Sbjct: 616 SVVAVG------------------TLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSPDG 657
Query: 588 EILATGSKDQTVFFFEVE---RDYKPIG 612
LA GS D ++ + V R Y +G
Sbjct: 658 NFLAIGSHDNCIYIYGVSDNGRKYTRVG 685
>gi|94681049 hypothetical protein LOC80217 [Homo sapiens]
Length = 1665
Score = 80.1 bits (196), Expect = 9e-15
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 146 RANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGS 205
+ N+ ++D+ Y GN +IF+N++TK++ L+ S+G +GV+ + +++
Sbjct: 29 KQNVHFVNDNTICYPCGNYVIFINIETKKKTVLQCSNGI-VGVMATNIPCEVVAFSDRKL 87
Query: 206 FPDIIIYEYPSLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPI 265
P I +Y +P L L+ Y + F+Y G LAS S P++ L +WNW+ +
Sbjct: 88 KPLIYVYSFPGLTRRTKLKGNILLDYTLLSFSYCGTYLASYSSLPEFELALWNWESSIIL 147
Query: 266 LRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFW 299
+ +V +++FNP QL S + W
Sbjct: 148 CKKSQPGMDVNQMSFNPMNWRQLCLSSPSTVSVW 181
Score = 40.8 bits (94), Expect = 0.006
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 663 SYEIKDMCIKCFHFSSVKSKI---LRLIEIEKRERQRELKEKIREERRNKLAAEMGE--D 717
S +K +KCFH V R +E E +E +R L++K E KL E+ E
Sbjct: 888 SMAVKGRALKCFHIPCVVENFPMKARTVE-ELKELERVLQQKKIEAECLKLRKEIVEAQS 946
Query: 718 GEKEFQEEEEEKEEEEEEEE 737
G K ++ EE +EEEEEE+
Sbjct: 947 GVKLIKQRHEEDDEEEEEED 966
>gi|22749037 WD repeat domain 65 [Homo sapiens]
Length = 698
Score = 77.0 bits (188), Expect = 8e-14
Identities = 114/545 (20%), Positives = 222/545 (40%), Gaps = 96/545 (17%)
Query: 136 VHSFGYDCRKRANLQLLDDSIAIYIAGNQLIFLNLKTKEQIYLRSSS-GEGIGVIGVHPH 194
+H FG N+ D+ I I+ +GN + N+ K Q ++ S +G+ + + P+
Sbjct: 9 LHVFGLRSHVANNIFYFDEQIIIFPSGNHCVKYNVDQKWQKFIPGSEKSQGMLALSISPN 68
Query: 195 KTYFTVAEK-GSFPDIIIYEYPSL--RPYRVLR--DGTEKGYAYVDFNYSGNLLASVGSN 249
+ Y ++E P I IYE S+ R +VL D + + + F+ L + S
Sbjct: 69 RRYLAISETVQEKPAITIYELSSIPCRKRKVLNNFDFQVQKFISMAFSPDSKYLLAQTSP 128
Query: 250 PDYTLTIWNWKEEQ--PILRTKAFSQEVFKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTG 307
P+ L W W++++ I+R + V++V+F+P Q+ +G+G K A
Sbjct: 129 PESNLVYWLWEKQKVMAIVRIDTQNNPVYQVSFSPQDNTQVCVTGNGMFKLLRFA----- 183
Query: 308 LKLQGSLGR--FGKTITTDIEGYMELPDGKVLSGSEWGNMLLWEGG------LIKVELCR 359
+G+L + F + + + + D K++ G++ G + L+E G I V+
Sbjct: 184 ---EGTLKQTSFQRGEPQNYLAHTWVADDKIVVGTDTGKLFLFESGDQRWETSIMVKEPT 240
Query: 360 GTSKSCH--------------NGPI------------NQIMLYEGEVITVGSDGYV---- 389
SKS + P+ +Q+ + + I S G+
Sbjct: 241 NGSKSLDVIQESESLIEFPPVSSPLPSYEQMVAASSHSQMSMPQVFAIAAYSKGFACSAG 300
Query: 390 --RIWDFETIDTADVIDETGLLEI----EPINELQVDKNVNLFSMIKMNETGNNFWLAQD 443
R+ FE ++ D E+ + I + + Q DK L +E +A
Sbjct: 301 PGRVLLFEKMEEKDFYRESREIRIPVDPQSNDPSQSDKQDVLCLCFSPSE---ETLVAST 357
Query: 444 ANGAIWKLDLSFSNITQDPECLFSF-----HSGAIEAVAVSPLTYLMATTALDCSVRIYD 498
+ ++ + +S + I++ F + HS I +A L+AT +LD S+R+++
Sbjct: 358 SKNQLYSITMSLTEISKGEPAHFEYLMYPLHSAPITGLATCIRKPLIATCSLDRSIRLWN 417
Query: 499 FASKTPLAQMKFKQGGTALVWVPRMVNFTGAQIIVGFEDGV---------VRILELYDPK 549
+ + T ++++ ++ P +G I+VGF D + +R + Y +
Sbjct: 418 YETNTLELFKEYQEEAYSISLHP-----SGHFIVVGFADKLRLMNLLIDDIRSFKEYSVR 472
Query: 550 GL---------TIFA---GRKKILDADIQLKQV--FKPHTACVTALAYERDGEILATGSK 595
G +FA G + L+ + K HT + ++ + D L +G
Sbjct: 473 GCGECSFSNGGHLFAAVNGNVIHVYTTTSLENISSLKGHTGKIRSIVWNADDSKLISGGT 532
Query: 596 DQTVF 600
D V+
Sbjct: 533 DGAVY 537
>gi|190684671 mitogen-activated protein kinase binding protein 1
isoform a [Homo sapiens]
Length = 1508
Score = 62.4 bits (150), Expect = 2e-09
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 156 IAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYP 215
+ Y AG ++ N + +Q ++ +SS + I + P Y E G P + +++
Sbjct: 63 LVAYPAGCVVVLFNPRKHKQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVA 122
Query: 216 SLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEV 275
L++ + G A V F+ S + SVG D + +W WK+ + K S V
Sbjct: 123 EHSQVAELQEH-KYGVACVAFSPSAKYIVSVGYQHDMIVNVWAWKKNIVVASNKV-SSRV 180
Query: 276 FKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTG--------LKLQGSLGRFGKTITTDI 325
V+F+ D T+G+ HIKFW + + T L G LG + TD+
Sbjct: 181 TAVSFSEDC-SYFVTAGNRHIKFWYLDDSKTSKVNATVPLLGRSGLLGELRNNLFTDV 237
>gi|190684677 mitogen-activated protein kinase binding protein 1
isoform b [Homo sapiens]
Length = 1514
Score = 62.4 bits (150), Expect = 2e-09
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 156 IAIYIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYP 215
+ Y AG ++ N + +Q ++ +SS + I + P Y E G P + +++
Sbjct: 63 LVAYPAGCVVVLFNPRKHKQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVA 122
Query: 216 SLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEV 275
L++ + G A V F+ S + SVG D + +W WK+ + K S V
Sbjct: 123 EHSQVAELQEH-KYGVACVAFSPSAKYIVSVGYQHDMIVNVWAWKKNIVVASNKV-SSRV 180
Query: 276 FKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTG--------LKLQGSLGRFGKTITTDI 325
V+F+ D T+G+ HIKFW + + T L G LG + TD+
Sbjct: 181 TAVSFSEDC-SYFVTAGNRHIKFWYLDDSKTSKVNATVPLLGRSGLLGELRNNLFTDV 237
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 62.4 bits (150), Expect = 2e-09
Identities = 88/393 (22%), Positives = 156/393 (39%), Gaps = 52/393 (13%)
Query: 228 EKGYAYVDFNYS--GNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKE 285
E+G + F+ + G L V + ++ L++W+ + K+ + V V FNP
Sbjct: 359 ERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMKLAEIKSTNDSVLAVGFNPRDS 418
Query: 286 EQLTTSGSGHIKFWE------MAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGKVLSG 339
+ TSG H+ FW + T + QG G++ K I ++ LPDG +L+G
Sbjct: 419 SCIVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGKYKK--PKFIPCFVFLPDGDILTG 476
Query: 340 SEWGNMLLWEGGLIKVEL-CRGTSKSCHNGPINQIMLYEGEV--ITVGSDGYVRIWDFET 396
GN+L W + RG +K + G + Q +EG + + + DG V
Sbjct: 477 DSEGNILTWGRSPSDSKTPGRGGAKETY-GIVAQAHAHEGSIFALCLRRDGTVLSGGGR- 534
Query: 397 IDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLS-- 454
D V GL+ ++ E ++ ++ I E + L A+ + DL+
Sbjct: 535 -DRRLVQWGPGLVALQ---EAEIPEHFGAVRAIA--EGLGSELLVGTTKNALLRGDLAQG 588
Query: 455 FSNITQDPECLFSFHSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGG 514
FS + Q H+ + + P T D + ++D S + K+ G
Sbjct: 589 FSPVIQG-------HTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHALAWSIDLKETG 641
Query: 515 TALVWVPRMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQVFKPH 574
+ P +GA + VG G +L+ + ++ ++D + QL
Sbjct: 642 LCADFHP-----SGAVVAVGLNTGRWLVLDTETREIVS------DVIDGNEQL------- 683
Query: 575 TACVTALAYERDGEILATGSKDQTVFFFEVERD 607
+ + Y DG LA GS D ++ + V D
Sbjct: 684 ----SVVRYSPDGLYLAIGSHDNVIYIYSVSSD 712
>gi|94400919 WD repeat domain 90 [Homo sapiens]
Length = 1748
Score = 61.6 bits (148), Expect = 3e-09
Identities = 79/367 (21%), Positives = 138/367 (37%), Gaps = 34/367 (9%)
Query: 236 FNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKVTFNPDKEEQLTTSGSGH 295
F+ LL ++G + TL +W + T+ + V V FNP +LT G G
Sbjct: 1214 FSPDDRLLVTLGDHDGRTLALWGTATYDLVSSTR-LPEPVHGVAFNPWDAGELTCVGQGT 1272
Query: 296 IKFWEMAFTFTGLKLQGSLGRFGKTITT-DIEGYMELPDGKVLSGSEWGNMLLWEGGLIK 354
+ FW + + LQ + + ++ + G+ G + +W+ +
Sbjct: 1273 VTFWLLQQRGADISLQVRREPVPEAVGAGELTSLCYGAPPLLYCGTSSGQVCVWDTRAGR 1332
Query: 355 VELCRGTSKSCHNGPINQIMLYEGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPI 414
L S +G I ++ +++ S G +R+W + +G +
Sbjct: 1333 CFL----SWEADDGGIGLLLFSGSRLVSGSSTGRLRLWAVGAVSELRC-KGSGASSVFME 1387
Query: 415 NELQVDKNVNLFSMIKMNETGNNFWLAQDANGAIWKLDLSFSNITQDPECLFSFHSGAIE 474
+EL +D V S + G + G +W + + T+ L S H +
Sbjct: 1388 HELVLDGAVVSASFDDSVDMG----VVGTTAGTLWFVSWAEGTSTR----LISGHRSKVN 1439
Query: 475 AVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMK-FKQGGTALVWVPRMVNFTGAQ-II 532
V SP AT + D SVR++ AS + Q + Q L W P Q +
Sbjct: 1440 EVVFSPGESHCATCSEDGSVRVWALASMELVIQFQVLNQSCLCLAWSPPCCGRPEQQRLA 1499
Query: 533 VGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGEILAT 592
G+ DG +RI + ++LK PH +T +A+ DG+ + +
Sbjct: 1500 AGYGDGSLRIFS---------------VSRTAMELKM--HPHPVALTTVAFSTDGQTVLS 1542
Query: 593 GSKDQTV 599
G KD V
Sbjct: 1543 GDKDGLV 1549
>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
Length = 1523
Score = 57.0 bits (136), Expect = 8e-08
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 159 YIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLR 218
Y+AG ++ L+ K +Q ++ +++ + + + P Y E G P + I++
Sbjct: 87 YLAGCVVVILDPKENKQQHIFNTARKSLSALAFSPDGKYIVTGENGHRPAVRIWDVEEKN 146
Query: 219 PYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKV 278
+ G + G A V F+ + + S+G D L +W+WK++ + K S V +
Sbjct: 147 QVAEML-GHKYGVACVAFSPNMKHIVSMGYQHDMVLNVWDWKKDIVVASNKV-SCRVIAL 204
Query: 279 TFNPDKEEQLTTSGSGHIKFW 299
+F+ D T G+ H++FW
Sbjct: 205 SFSED-SSYFVTVGNRHVRFW 224
>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
Length = 1518
Score = 57.0 bits (136), Expect = 8e-08
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 159 YIAGNQLIFLNLKTKEQIYLRSSSGEGIGVIGVHPHKTYFTVAEKGSFPDIIIYEYPSLR 218
Y+AG ++ L+ K +Q ++ +++ + + + P Y E G P + I++
Sbjct: 87 YLAGCVVVILDPKENKQQHIFNTARKSLSALAFSPDGKYIVTGENGHRPAVRIWDVEEKN 146
Query: 219 PYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEVFKV 278
+ G + G A V F+ + + S+G D L +W+WK++ + K S V +
Sbjct: 147 QVAEML-GHKYGVACVAFSPNMKHIVSMGYQHDMVLNVWDWKKDIVVASNKV-SCRVIAL 204
Query: 279 TFNPDKEEQLTTSGSGHIKFW 299
+F+ D T G+ H++FW
Sbjct: 205 SFSED-SSYFVTVGNRHVRFW 224
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 49.3 bits (116), Expect = 2e-05
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPEI 742
EKR ++ +EK REE+R + E+ EKE +EEEEE+EEEEEEEE E+
Sbjct: 70 EKRREEKRREEKRREEKRREGKRREKEE-EKEEEEEEEEEEEEEEEEEEEEEV 121
Score = 47.4 bits (111), Expect = 7e-05
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 691 KRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+R ++ +EK REE+R + G+ EKE ++EEEE+EEEEEEEE
Sbjct: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEE 112
Score = 35.4 bits (80), Expect = 0.26
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEE-------KEEEEEEEE 737
E + E++RE K + +EE + + E E+ E+E +EEEEE +E E E EE
Sbjct: 80 EKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEE 136
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 654 QEEDDHDVVSYEIK---DMCIKCFH--FSSVKSKILRLIEIEKRERQRELKEKIREERRN 708
Q ED +VV + D+C + S SK ++ E+ + + E +E+ EE
Sbjct: 217 QPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEE 276
Query: 709 KLAAEMGEDGEKEFQEEEEEKEEEEEEEEPL------------------PEIFIPSTPSP 750
+ E E+ E+E +EEEEE+EEEEEEEE PE+ P +PSP
Sbjct: 277 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSP 336
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 47.8 bits (112), Expect = 5e-05
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 377 EGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGN 436
+ ++T DG +++W+ + TA + L++EPI+ + + L + N +
Sbjct: 457 QSALLTASEDGTLKLWNLQKAVTA---KKNAALDVEPIHAFRAHRGPVLAVAMGSN---S 510
Query: 437 NFWLAQDANGAI--WKL-DLSFSNIT-QDPECL---FSFHSGAIEAVAVSPLTYLMATTA 489
+ + A+ I WK+ DLS DP L H A+ +A SP + +A+ +
Sbjct: 511 EYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCS 570
Query: 490 LDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTG---AQIIVGFEDGVVRILELY 546
D +VRI+D +S +P F VP V FT A I+ F G LY
Sbjct: 571 ADGTVRIWDPSSSSPACLCTFPTASEH--GVPTSVAFTSTEPAHIVASFRSGDT---VLY 625
Query: 547 DPK-GLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDG 587
D + G + + Q+ QV +T A++ G
Sbjct: 626 DMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRG 667
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 47.8 bits (112), Expect = 5e-05
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 377 EGEVITVGSDGYVRIWDFETIDTADVIDETGLLEIEPINELQVDKNVNLFSMIKMNETGN 436
+ ++T DG +++W+ + TA + L++EPI+ + + L + N +
Sbjct: 450 QSALLTASEDGTLKLWNLQKAVTA---KKNAALDVEPIHAFRAHRGPVLAVAMGSN---S 503
Query: 437 NFWLAQDANGAI--WKL-DLSFSNIT-QDPECL---FSFHSGAIEAVAVSPLTYLMATTA 489
+ + A+ I WK+ DLS DP L H A+ +A SP + +A+ +
Sbjct: 504 EYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCS 563
Query: 490 LDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTG---AQIIVGFEDGVVRILELY 546
D +VRI+D +S +P F VP V FT A I+ F G LY
Sbjct: 564 ADGTVRIWDPSSSSPACLCTFPTASEH--GVPTSVAFTSTEPAHIVASFRSGDT---VLY 618
Query: 547 DPK-GLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDG 587
D + G + + Q+ QV +T A++ G
Sbjct: 619 DMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRG 660
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 46.2 bits (108), Expect = 1e-04
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 680 KSKILRLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEE 736
K K + E EKR +++E +EK R+ +R K E E+ E+E +EEEEEKEEEE+EE
Sbjct: 40 KEKKKKTKETEKR-KEKEEEEKKRKRKRKKKKEE--EEREEEEEEEEEEKEEEEKEE 93
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 688 EIEKRERQREL-KEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPE 741
E EK+++ +E K K +EE K + + E+E +EEEEE+EEEE+EEE E
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEE 93
Score = 42.0 bits (97), Expect = 0.003
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+++E++++ K K E+R+ K E +++ ++EEEE+EEEEEEEE
Sbjct: 36 KRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEE 83
Score = 39.3 bits (90), Expect = 0.018
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEK------EFQEEEEEKEEEEEEEEPLPE 741
EKR+ +R+ KEK ++ + + E E+ +K + +EEEE +EEEEEEEE E
Sbjct: 31 EKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEE 88
Score = 38.1 bits (87), Expect = 0.041
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEE----------KEEEEEEEE 737
E+ E++ + KEK +E+R+ K + ++ EK ++EEEE KEEEE EEE
Sbjct: 21 EEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEE 78
Score = 35.0 bits (79), Expect = 0.35
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 11/61 (18%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEE-----------EKEEEEEEE 736
E E+ E++R+ K K ++E + E E+ EKE +E+EE KEEEEE++
Sbjct: 54 EKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKK 113
Query: 737 E 737
+
Sbjct: 114 K 114
Score = 30.8 bits (68), Expect = 6.5
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E+ E + E + K +E+R+ K E +K+ +E E+++E+EEEE+
Sbjct: 15 ETEETEEEEEKEGKRKEKRKEKRK----EKEKKKKTKETEKRKEKEEEEK 60
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 45.4 bits (106), Expect = 3e-04
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 644 ILEAPLPTIKQEEDDHDVVSYEI---KDMCIKCFHFSSVKSKILRLIEIEKRERQRELKE 700
I + + I+ EED D++S EI +D K K K + IE E+RER+RE
Sbjct: 259 ITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERE--- 315
Query: 701 KIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
RE R + E + E+E ++E+E + E E + +
Sbjct: 316 --RERERERREREREREREREREKEKERERERERDRD 350
Score = 37.0 bits (84), Expect = 0.091
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 22/76 (28%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQ----------------------EE 725
E+E ER R+ +++ EE R +L AE D + E Q EE
Sbjct: 528 EMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEE 587
Query: 726 EEEKEEEEEEEEPLPE 741
EE++E+EE+ EEP+ E
Sbjct: 588 EEKQEKEEKREEPMEE 603
Score = 36.6 bits (83), Expect = 0.12
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 691 KRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+RER+RE + + ER + E + E+E + E+++K + EE+EE
Sbjct: 392 EREREREREREREREREREREREREREREREREREKDKKRDREEDEE 438
Score = 34.3 bits (77), Expect = 0.59
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 696 RELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEE--EEEEEPLPEIFIPSTPSPI 751
+ ++++ R+ ++ E + E+E ++E+EEK EE EEEEEP + + T PI
Sbjct: 563 QRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPI 620
Score = 32.7 bits (73), Expect = 1.7
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 691 KRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPE 741
+RER+RE + + ER + E +D +++ +E+EE+ E + E L E
Sbjct: 402 EREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLRE 452
Score = 32.7 bits (73), Expect = 1.7
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEP 738
E+++ E++ E + + + ++ + E E EKE + EE +EEEE E++P
Sbjct: 561 ELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKP 611
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 45.1 bits (105), Expect = 3e-04
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 699 KEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+E REE ++ E GE+ E+E +EEEEE+EEEEEEEE
Sbjct: 109 EETEREEEDEEIQEEGGEEEEEEEEEEEEEEEEEEEEEE 147
Score = 38.5 bits (88), Expect = 0.031
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 686 LIEIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPE 741
L+ E+ ER+ E E+I+EE E E+ E+E +EEEEE+EEEEE+ P+
Sbjct: 105 LVGEEETEREEE-DEEIQEE-----GGEEEEEEEEEEEEEEEEEEEEEEQPRAGPQ 154
Score = 33.1 bits (74), Expect = 1.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 234 VDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKA-FSQEVFKVTFNPD 283
V FN G LAS G D + +W+W ++P+L ++ + VF+ F P+
Sbjct: 234 VHFNQRGTRLASSGD--DLKVIVWDWVRQRPVLNFESGHTNNVFQAKFLPN 282
Score = 31.2 bits (69), Expect = 5.0
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 16/77 (20%)
Query: 655 EEDDHDVVSYEIKDMCIKCFHFSSVKSKILRLIEIEKRERQRELKEKIREERRNKLAAEM 714
E+ +H ++S E FH+ V + E E+ E E++E+ EE E
Sbjct: 88 EDFEHFLMSGE------SLFHYPLVGEE-----ETEREEEDEEIQEEGGEEEE-----EE 131
Query: 715 GEDGEKEFQEEEEEKEE 731
E+ E+E +EEEEE+E+
Sbjct: 132 EEEEEEEEEEEEEEEEQ 148
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 45.1 bits (105), Expect = 3e-04
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPEIFIPSTPS 749
EK R +++ +++++ K E E+ E+E +EEEEE+EE EEEEE LP + S S
Sbjct: 1110 EKYRLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEELPPQYFSSETS 1169
Score = 32.3 bits (72), Expect = 2.2
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 685 RLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKE 730
RL ++++Q++ ++K +EE + E E+ E+E + EEEE+E
Sbjct: 1113 RLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEE 1158
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 44.7 bits (104), Expect = 4e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPL 739
E E+ E + E +E+ EE + E G GE E EEEEE+EEEEEEEE +
Sbjct: 226 EKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEEQI 277
Score = 40.8 bits (94), Expect = 0.006
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E+ + + E KE+ EE + E GE+G + EE E+EEEEEEEE
Sbjct: 222 EEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEE 271
Score = 36.2 bits (82), Expect = 0.15
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEM--GEDGEKEFQEEEEEKEEEEEEEE 737
E E+ E E AAE+ ED E+E +EEEEEKEEEEEE E
Sbjct: 190 EAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGE 241
Score = 34.7 bits (78), Expect = 0.45
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 686 LIEIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E E+ E + E +EK EE + GE+GE+ E E+ EEEEEEE
Sbjct: 218 VVEDEEEEEKEEEEEKEEEEEEGEEEGG-GEEGEEGGGGGEGEETEEEEEEE 268
Score = 32.0 bits (71), Expect = 2.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 710 LAAEMGEDGEKEFQEEEEEKEEEEEEE 736
+ E E+ EKE +EE+EE+EEE EEE
Sbjct: 217 IVVEDEEEEEKEEEEEKEEEEEEGEEE 243
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 44.7 bits (104), Expect = 4e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E E++E E+ E+ EDGE+E +EEEEE+EEEEEEEE
Sbjct: 207 EDVEEDEEVEEDAEEDE------EVDEDGEEEEEEEEEEEEEEEEEEE 248
Score = 38.9 bits (89), Expect = 0.024
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 698 LKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E + E+ + AE E+ +++ +EEEEE+EEEEEEEE
Sbjct: 205 VEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
Score = 33.5 bits (75), Expect = 1.0
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E+ E E E++ E+ + E E+ E+E +EEE E++E +++EE
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 31.6 bits (70), Expect = 3.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 699 KEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+E + E+ E + ++E E+ EE+EEEEEEEE
Sbjct: 202 EEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE 240
Score = 30.8 bits (68), Expect = 6.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E+ E E E+ E + E E+ E+E +EEEEE+ E++E ++
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQ 257
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 44.7 bits (104), Expect = 4e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E E++E E+ E+ EDGE+E +EEEEE+EEEEEEEE
Sbjct: 207 EDVEEDEEVEEDAEEDE------EVDEDGEEEEEEEEEEEEEEEEEEE 248
Score = 38.9 bits (89), Expect = 0.024
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 698 LKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E + E+ + AE E+ +++ +EEEEE+EEEEEEEE
Sbjct: 205 VEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
Score = 33.5 bits (75), Expect = 1.0
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E E+ E E E++ E+ + E E+ E+E +EEE E++E +++EE
Sbjct: 211 EDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 31.6 bits (70), Expect = 3.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 699 KEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+E + E+ E + ++E E+ EE+EEEEEEEE
Sbjct: 202 EEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE 240
Score = 30.8 bits (68), Expect = 6.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 688 EIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E+ E E E+ E + E E+ E+E +EEEEE+ E++E ++
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQ 257
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 44.3 bits (103), Expect = 6e-04
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 690 EKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEE 736
E E RE +E+I EE + E GED E E +EEEEE+EEEEEEE
Sbjct: 123 EDEEGDREEEEEIEEEDEDD--DEDGEDVEDEEEEEEEEEEEEEEEE 167
Score = 31.6 bits (70), Expect = 3.8
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 678 SVKSKILRLIEIEKRERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
+VK+ + E + + ++ EK +E E ED ++ E+EE++E + EEEE
Sbjct: 79 AVKADSSSVDECDDSDGTEDMDEKEEDE-----GEEYSEDNDEPGDEDEEDEEGDREEEE 133
Query: 738 PLPE 741
+ E
Sbjct: 134 EIEE 137
>gi|21071067 TBP-associated factor 5 [Homo sapiens]
Length = 800
Score = 43.9 bits (102), Expect = 7e-04
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 21/204 (10%)
Query: 216 SLRPYRVLRDGTEKGYAYVDFNYSGNLLASVGSNPDYTLTIWNWKEEQPILRTKAFSQEV 275
SL+ + L Y D +S V D +W QP+ +V
Sbjct: 571 SLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV 630
Query: 276 FKVTFNPDKEEQLTTSGSGHIKFWEMAFTFTGLKLQGSLGRFGKTITTDIEGYMELPDGK 335
F+P+ T S ++ W++ L G+ R I P+G+
Sbjct: 631 NCTRFHPNSNYVATGSADRTVRLWDV--------LNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 336 VL-SGSEWGNMLLWE--GGLIKVELCRGTSKSCHNGPINQIMLYEGEVITVGS-DGYVRI 391
L +G+ G +LLW+ GL+ EL T C + +GE++ GS D VR+
Sbjct: 683 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVC-----SLRFSRDGEILASGSMDNTVRL 737
Query: 392 WD----FETIDTADVIDETGLLEI 411
WD FE ++T D TG + +
Sbjct: 738 WDAIKAFEDLETDDFTTATGHINL 761
Score = 41.6 bits (96), Expect = 0.004
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 462 PECLFSFHSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGT-ALVWV 520
P +F+ H + P + +AT + D +VR++D + + +G +L +
Sbjct: 619 PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFS 678
Query: 521 PRMVNFTGAQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTA 580
P G + G DG V + ++ G + G K HT V +
Sbjct: 679 PN-----GRFLATGATDGRVLLWDI----GHGLMVGE-------------LKGHTDTVCS 716
Query: 581 LAYERDGEILATGSKDQTVFFFEVERDYKPI---------GYINTP 617
L + RDGEILA+GS D TV ++ + ++ + G+IN P
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLP 762
Score = 40.0 bits (92), Expect = 0.011
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 469 HSGAIEAVAVSPLTYLMATTALDCSVRIYDFASKTPLAQMKFKQGGTALVWVPRMVNFTG 528
HSG + + SP + +++ D +VR++ + T L K G VW + + G
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYK---GHNYPVWDTQFSPY-G 597
Query: 529 AQIIVGFEDGVVRILELYDPKGLTIFAGRKKILDADIQLKQVFKPHTACVTALAYERDGE 588
+ G D V R+ + L IFAG H A V + +
Sbjct: 598 YYFVSGGHDRVARLWATDHYQPLRIFAG-----------------HLADVNCTRFHPNSN 640
Query: 589 ILATGSKDQTVFFFEVERDYKPIGYINTPGPVCQLMWSP 627
+ATGS D+TV ++V + GP+ L +SP
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 43.9 bits (102), Expect = 7e-04
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 688 EIEKRERQRELKEKIREERRN---KLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
++E++ ++E K+++ EE N + E EDGE+E + EEE++EEEEE++E
Sbjct: 23 KVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDE 75
Score = 36.2 bits (82), Expect = 0.15
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 692 RERQRELKEKIREERRNKLAAEMGEDGEKEFQEE------EEEKEEEEEEEE 737
+E++ +++EK + R K E E+G +E +EE EE++ EEE+EEE
Sbjct: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
Score = 30.4 bits (67), Expect = 8.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 693 ERQRELKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEE 737
E EL K +E++ K+ + K+ EEEE EEEEEE
Sbjct: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEE 51
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,988,633
Number of Sequences: 37866
Number of extensions: 1964769
Number of successful extensions: 34478
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 17627
Number of HSP's gapped (non-prelim): 10524
length of query: 982
length of database: 18,247,518
effective HSP length: 112
effective length of query: 870
effective length of database: 14,006,526
effective search space: 12185677620
effective search space used: 12185677620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.