Guide to the Human Genome
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Name: NASP Sequence: fasta or formatted (449aa) NCBI GI: 27262630
Description:

nuclear autoantigenic sperm protein isoform 3

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Testes and Sperm

Other entries for this name:
alt prot [788aa] nuclear autoantigenic sperm protein isoform 2
alt prot [790aa] nuclear autoantigenic sperm protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         50           2
 C cysteine            0.9          4           1
 D aspartate           5.1         23           2
 E glutamate          16.9         76           4
 F phenylalanine       1.8          8           3
 G glycine             6.7         30           4
 H histidine           1.3          6           1
 I isoleucine          2.9         13           2
 K lysine              7.1         32           2
 L leucine             8.5         38           2
 M methionine          2.0          9           1
 N asparagine          5.1         23           2
 P proline             2.4         11           1
 Q glutamine           3.8         17           1
 R arginine            2.4         11           1
 S serine              8.7         39           3
 T threonine           3.8         17           1
 V valine              6.9         31           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear autoantigenic sperm protein isoform 3 
NASP                  0.695   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.695   nuclear autoantigenic sperm protein isoform 1 
CGN                   0.031   cingulin 
FHAD1                 0.031   forkhead-associated (FHA) phosphopeptide binding do...
SMC4                  0.031   SMC4 structural maintenance of chromosomes 4-like 1 ...
SMC4                  0.031   SMC4 structural maintenance of chromosomes 4-like 1 ...
KIF21A                0.027   kinesin family member 21A 
KIF3B                 0.027   kinesin family member 3B 
CALD1                 0.026   caldesmon 1 isoform 1 
ROCK1                 0.025   Rho-associated, coiled-coil containing protein kinase...
CGNL1                 0.025   cingulin-like 1 
LOC645202             0.024   PREDICTED: hypothetical protein LOC645202 
ANP32B                0.024   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
LOC100133758          0.024   PREDICTED: hypothetical protein, partial 
TPM1                  0.024   tropomyosin 1 alpha chain isoform 2 
TXLNA                 0.024   taxilin 
EIF3A                 0.024   eukaryotic translation initiation factor 3, subunit 1...
TPM1                  0.024   tropomyosin 1 alpha chain isoform 7 
TPM1                  0.024   tropomyosin 1 alpha chain isoform 3 
RP1L1                 0.024   retinitis pigmentosa 1-like 1 
WDR87                 0.023   NYD-SP11 protein 
TPM1                  0.023   tropomyosin 1 alpha chain isoform 4 
GOLGA2                0.023   Golgi autoantigen, golgin subfamily a, 2 
MYH10                 0.023   myosin, heavy polypeptide 10, non-muscle 
CENPE                 0.023   centromere protein E 
KTN1                  0.023   kinectin 1 isoform a 
KTN1                  0.023   kinectin 1 isoform a 
LOC728792             0.023   PREDICTED: hypothetical protein 
CCDC88A               0.023   coiled-coil domain containing 88A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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