Guide to the Human Genome
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Name: DISP1 Sequence: fasta or formatted (1524aa) NCBI GI: 25952134
Description:

dispatched A

Referenced in:

Hedgehog and Related Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        105           3
 C cysteine            4.3         65           2
 D aspartate           4.0         61           2
 E glutamate           4.9         75           2
 F phenylalanine       5.5         84           3
 G glycine             4.5         69           2
 H histidine           3.9         60           2
 I isoleucine          4.7         72           3
 K lysine              4.7         71           2
 L leucine             9.1        138           2
 M methionine          3.0         46           3
 N asparagine          4.6         70           2
 P proline             5.9         90           2
 Q glutamine           4.4         67           3
 R arginine            3.2         49           2
 S serine              9.0        137           2
 T threonine           6.1         93           2
 V valine              6.4         98           3
 W tryptophan          1.5         23           1
 Y tyrosine            3.3         51           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dispatched A 
DISP2                 0.273   dispatched B 
PTCHD2                0.019   patched domain containing 2 
PTCHD3                0.012   patched domain containing 3 
NPC1                  0.010   Niemann-Pick disease, type C1 precursor 
PTCH1                 0.008   patched isoform S 
PTCH1                 0.008   patched isoform S 
PTCH1                 0.008   patched isoform S 
PTCH1                 0.008   patched isoform S 
PTCH1                 0.008   patched isoform L' 
PTCH1                 0.008   patched isoform M 
PTCH1                 0.008   patched isoform L 
PTCH2                 0.007   patched 2 
NPC1L1                0.005   Niemann-Pick C1-like protein 1 isoform 2 
NPC1L1                0.005   Niemann-Pick C1-like protein 1 isoform 1 
MSLNL                 0.005   mesothelin-like 
PTPRZ1                0.004   protein tyrosine phosphatase, receptor-type, zeta1 p...
NEUROD1               0.003   neurogenic differentiation 1 
RNF111                0.003   ring finger protein 111 
PTCHD1                0.003   patched domain containing 1 
ECSIT                 0.003   evolutionarily conserved signaling intermediate in T...
ECSIT                 0.003   evolutionarily conserved signaling intermediate in ...
HSPG2                 0.003   heparan sulfate proteoglycan 2 
ITGB5                 0.003   integrin, beta 5 
SPEN                  0.003   spen homolog, transcriptional regulator 
PHLDA1                0.003   pleckstrin homology-like domain, family A, member 1 ...
KRTAP10-6             0.003   keratin associated protein 10-6 
TMED8                 0.003   transmembrane emp24 protein transport domain contain...
CHFR                  0.003   checkpoint with forkhead and ring finger domains is...
LOC100130599          0.003   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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