C20orf19 23965

Name: C20orf19	Sequence: fasta or formatted (540aa)		NCBI GI: 247301334
Description: non-protein coding RNA 153 isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {673aa} non-protein coding RNA 153 isoform 1 alt prot {570aa} non-protein coding RNA 153 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 34 2 C cysteine 1.7 9 1 D aspartate 5.6 30 2 E glutamate 11.1 60 5 F phenylalanine 1.5 8 1 G glycine 4.8 26 2 H histidine 3.1 17 1 I isoleucine 4.6 25 1 K lysine 6.7 36 3 L leucine 6.9 37 2 M methionine 1.5 8 1 N asparagine 5.6 30 1 P proline 5.7 31 2 Q glutamine 4.4 24 1 R arginine 4.3 23 2 S serine 14.3 77 3 T threonine 6.3 34 2 V valine 4.1 22 2 W tryptophan 0.9 5 1 Y tyrosine 0.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 non-protein coding RNA 153 isoform 3 C20orf19 0.997 non-protein coding RNA 153 isoform 2 C20orf19 0.997 non-protein coding RNA 153 isoform 1 DSPP 0.023 dentin sialophosphoprotein preproprotein PNN 0.019 pinin, desmosome associated protein NEFH 0.018 neurofilament, heavy polypeptide 200kDa NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.017 neurofilament, medium polypeptide 150kDa isoform 2 ... RAPGEF6 0.017 PDZ domain-containing guanine nucleotide exchange fa... PRDM2 0.015 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.015 retinoblastoma protein-binding zinc finger protein i... C10orf18 0.014 hypothetical protein LOC54906 DCAF6 0.013 IQ motif and WD repeats 1 isoform a PHIP 0.013 pleckstrin homology domain interacting protein [Homo... MAP1B 0.013 microtubule-associated protein 1B HIRIP3 0.012 HIRA interacting protein 3 SPARCL1 0.011 SPARC-like 1 SPARCL1 0.011 SPARC-like 1 SETD1B 0.011 SET domain containing 1B CCNT2 0.010 cyclin T2 isoform b KIAA1210 0.010 hypothetical protein LOC57481 DCAF6 0.010 IQ motif and WD repeats 1 isoform b CHGA 0.010 chromogranin A precursor RERE 0.010 atrophin-1 like protein isoform b RERE 0.010 atrophin-1 like protein isoform a RERE 0.010 atrophin-1 like protein isoform a PRDM2 0.010 retinoblastoma protein-binding zinc finger protein i... C11orf63 0.010 hypothetical protein LOC79864 isoform 1 NES 0.010 nestin ANKRD36 0.010 PREDICTED: ankyrin repeat domain 36 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.