Search of human proteins with 239753784

Search of human proteins with 239753784

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
         (814 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                1679   0.0  
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]               800   0.0  
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                 422   e-118
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]                 189   1e-47
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]                 189   1e-47
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]                 189   1e-47
gi|226437602 NK1 homeobox 2 [Homo sapiens]                            184   2e-46
gi|116805350 homeo box (H6 family) 1 [Homo sapiens]                   118   2e-26
gi|24497589 aristaless related homeobox [Homo sapiens]                111   2e-24
gi|89257348 homeo box HB9 [Homo sapiens]                              107   3e-23
gi|4502365 NK3 homeobox 2 [Homo sapiens]                               99   2e-20
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       97   5e-20
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       97   5e-20
gi|4758168 distal-less homeobox 2 [Homo sapiens]                       96   2e-19
gi|126116581 retina and anterior neural fold homeobox [Homo sapi...    96   2e-19
gi|19923391 homeobox D3 [Homo sapiens]                                 94   4e-19
gi|14149728 BarH-like homeobox 1 [Homo sapiens]                        92   3e-18
gi|33457326 GS homeobox 1 [Homo sapiens]                               91   3e-18
gi|157426823 NK2 homeobox 4 [Homo sapiens]                             91   3e-18
gi|126090909 engrailed homeobox 1 [Homo sapiens]                       89   2e-17
gi|84570137 homeobox B3 [Homo sapiens]                                 89   2e-17
gi|84105335 mesenchyme homeobox 2 [Homo sapiens]                       88   3e-17
gi|157743259 H6 family homeobox 3 [Homo sapiens]                       88   3e-17
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]             88   4e-17
gi|210147470 NK2 transcription factor related, locus 6 [Homo sap...    87   6e-17
gi|23397672 homeobox D4 [Homo sapiens]                                 87   8e-17
gi|7710121 engrailed homeobox 2 [Homo sapiens]                         86   1e-16
gi|4503615 even-skipped homeobox 1 [Homo sapiens]                      86   1e-16
gi|6633798 BarH-like homeobox 2 [Homo sapiens]                         86   1e-16
gi|148613882 homeobox A4 [Homo sapiens]                                86   1e-16

>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 1679 bits (4347), Expect = 0.0
 Identities = 814/814 (100%), Positives = 814/814 (100%)

Query: 1   MTVPNSFIEHLLCCGNRGVSLSALIPAPYDRHSAHPVGGATRSPVSDNGGVGSSWGTACW 60
           MTVPNSFIEHLLCCGNRGVSLSALIPAPYDRHSAHPVGGATRSPVSDNGGVGSSWGTACW
Sbjct: 1   MTVPNSFIEHLLCCGNRGVSLSALIPAPYDRHSAHPVGGATRSPVSDNGGVGSSWGTACW 60

Query: 61  KKRWHPRLGVVHSFWRSHRPLSGHILEKEPRPESRGLPSDFPNSGVFLPTPTPKPIVTPP 120
           KKRWHPRLGVVHSFWRSHRPLSGHILEKEPRPESRGLPSDFPNSGVFLPTPTPKPIVTPP
Sbjct: 61  KKRWHPRLGVVHSFWRSHRPLSGHILEKEPRPESRGLPSDFPNSGVFLPTPTPKPIVTPP 120

Query: 121 GPAAGESSAMEGMFPVHWAGRGSPPPALISPASPATQRSPGEGAQQPGKCLVCPSSGNSE 180
           GPAAGESSAMEGMFPVHWAGRGSPPPALISPASPATQRSPGEGAQQPGKCLVCPSSGNSE
Sbjct: 121 GPAAGESSAMEGMFPVHWAGRGSPPPALISPASPATQRSPGEGAQQPGKCLVCPSSGNSE 180

Query: 181 RGTNTSAELALALAGKREMQGCQRVCSGDRSVRRRAHPPVHAPARSHPEEARALALPAPT 240
           RGTNTSAELALALAGKREMQGCQRVCSGDRSVRRRAHPPVHAPARSHPEEARALALPAPT
Sbjct: 181 RGTNTSAELALALAGKREMQGCQRVCSGDRSVRRRAHPPVHAPARSHPEEARALALPAPT 240

Query: 241 RVHLRLAARCVGRRRRERSDPPGSYHDPALGLRTPGPILEGRGPRAAGPCPANTAAVDKT 300
           RVHLRLAARCVGRRRRERSDPPGSYHDPALGLRTPGPILEGRGPRAAGPCPANTAAVDKT
Sbjct: 241 RVHLRLAARCVGRRRRERSDPPGSYHDPALGLRTPGPILEGRGPRAAGPCPANTAAVDKT 300

Query: 301 QGGWRAVSGRAEAQRRAADHHSRLRTALGSGLRVCSSRPAAPSVCPVRGPPPRPGTVRSQ 360
           QGGWRAVSGRAEAQRRAADHHSRLRTALGSGLRVCSSRPAAPSVCPVRGPPPRPGTVRSQ
Sbjct: 301 QGGWRAVSGRAEAQRRAADHHSRLRTALGSGLRVCSSRPAAPSVCPVRGPPPRPGTVRSQ 360

Query: 361 LGARANEGGGAPRPPAGARVFGVWARGRLRRGCHKCADRAPRAPKAAAKAAPAKRTARRR 420
           LGARANEGGGAPRPPAGARVFGVWARGRLRRGCHKCADRAPRAPKAAAKAAPAKRTARRR
Sbjct: 361 LGARANEGGGAPRPPAGARVFGVWARGRLRRGCHKCADRAPRAPKAAAKAAPAKRTARRR 420

Query: 421 XXXXDTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPC 480
               DTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPC
Sbjct: 421 XXXXDTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPC 480

Query: 481 ASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYS 540
           ASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYS
Sbjct: 481 ASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYS 540

Query: 541 SGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETD 600
           SGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETD
Sbjct: 541 SGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETD 600

Query: 601 ASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSG 660
           ASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSG
Sbjct: 601 ASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSG 660

Query: 661 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 720
           KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ
Sbjct: 661 KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 720

Query: 721 NPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV 780
           NPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV
Sbjct: 721 NPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV 780

Query: 781 CAAQLPFLSSPAVLSPFVLGSQTYGAPAFYAPHL 814
           CAAQLPFLSSPAVLSPFVLGSQTYGAPAFYAPHL
Sbjct: 781 CAAQLPFLSSPAVLSPFVLGSQTYGAPAFYAPHL 814


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score =  800 bits (2067), Expect = 0.0
 Identities = 389/390 (99%), Positives = 389/390 (99%)

Query: 425 DTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAP 484
           DTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAP
Sbjct: 22  DTVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAP 81

Query: 485 CAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGG 544
           CAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGG
Sbjct: 82  CAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGG 141

Query: 545 GHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPG 604
           GHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPG
Sbjct: 142 GHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPG 201

Query: 605 ATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRR 664
           ATVDEAAAPGPRENSPVA GPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRR
Sbjct: 202 ATVDEAAAPGPRENSPVAQGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRR 261

Query: 665 ARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGA 724
           ARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGA
Sbjct: 262 ARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGA 321

Query: 725 DTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQ 784
           DTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQ
Sbjct: 322 DTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQ 381

Query: 785 LPFLSSPAVLSPFVLGSQTYGAPAFYAPHL 814
           LPFLSSPAVLSPFVLGSQTYGAPAFYAPHL
Sbjct: 382 LPFLSSPAVLSPFVLGSQTYGAPAFYAPHL 411


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score =  422 bits (1086), Expect = e-118
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 613 PGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYE 672
           PGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYE
Sbjct: 48  PGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYE 107

Query: 673 QLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGG 732
           QLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGG
Sbjct: 108 QLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGG 167

Query: 733 GGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQLPFLSSPA 792
           GGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQLPFLSSPA
Sbjct: 168 GGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQLPFLSSPA 227

Query: 793 VLSPFVLGSQTYGAPAFYAPHL 814
           VLSPFVLGSQTYGAPAFYAPHL
Sbjct: 228 VLSPFVLGSQTYGAPAFYAPHL 249


>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score =  189 bits (479), Expect = 1e-47
 Identities = 160/385 (41%), Positives = 190/385 (49%), Gaps = 64/385 (16%)

Query: 435 GAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAAC-APCASAPCAPAPAASG 493
           G A+ A      SFSVLDILDP KF         L  V PA   A  + A       AS 
Sbjct: 7   GGAKAAPSHHKISFSVLDILDPQKFTR-----AALPAVRPAPREARKSLAEVEAGKDASS 61

Query: 494 RPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSG 553
           R P   +LE      A  +    A P ++ D   A            +G G    S   G
Sbjct: 62  RDP-VRQLETPGQGFAASLLTRQAHPHHSSDARDA------------AGPGAGQASPLEG 108

Query: 554 DEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAP 613
            E  ++ED ++   P     R  E A     GL               SP A     A+ 
Sbjct: 109 SEAEEEEDAEDPRRP-----RLRERAARLLPGLA-------------RSPDAPAGALASG 150

Query: 614 GPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQ 673
            P E+        GG    GG   +P G+  + +P+R+R   +    KPRRARTAFTYEQ
Sbjct: 151 EPCED--------GG----GGPVRSPPGSPGSPRPRRRRL--EPNCAKPRRARTAFTYEQ 196

Query: 674 LVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGG 733
           LVALENKF+ATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD +A   GG
Sbjct: 197 LVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQV-GG 255

Query: 734 GGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV--CAAQLPFLSSP 791
           G P PGA  G G  GG S  SP PP    L       +P++    ++   AA  P L++ 
Sbjct: 256 GAPQPGAAGGGG--GGGSGGSPGPPGTGALHFQ---TFPSYSAANVLFPSAASFP-LTAA 309

Query: 792 AVLSPFV--LGSQTYGAPAFYAPHL 814
           A  SPF   LG  +Y  P FYAP L
Sbjct: 310 APGSPFAPFLG-PSYLTP-FYAPRL 332


>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score =  189 bits (479), Expect = 1e-47
 Identities = 160/385 (41%), Positives = 190/385 (49%), Gaps = 64/385 (16%)

Query: 435 GAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAAC-APCASAPCAPAPAASG 493
           G A+ A      SFSVLDILDP KF         L  V PA   A  + A       AS 
Sbjct: 7   GGAKAAPSHHKISFSVLDILDPQKFTR-----AALPAVRPAPREARKSLAEVEAGKDASS 61

Query: 494 RPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSG 553
           R P   +LE      A  +    A P ++ D   A            +G G    S   G
Sbjct: 62  RDP-VRQLETPGQGFAASLLTRQAHPHHSSDARDA------------AGPGAGQASPLEG 108

Query: 554 DEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAP 613
            E  ++ED ++   P     R  E A     GL               SP A     A+ 
Sbjct: 109 SEAEEEEDAEDPRRP-----RLRERAARLLPGLA-------------RSPDAPAGALASG 150

Query: 614 GPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQ 673
            P E+        GG    GG   +P G+  + +P+R+R   +    KPRRARTAFTYEQ
Sbjct: 151 EPCED--------GG----GGPVRSPPGSPGSPRPRRRRL--EPNCAKPRRARTAFTYEQ 196

Query: 674 LVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGG 733
           LVALENKF+ATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD +A   GG
Sbjct: 197 LVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQV-GG 255

Query: 734 GGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV--CAAQLPFLSSP 791
           G P PGA  G G  GG S  SP PP    L       +P++    ++   AA  P L++ 
Sbjct: 256 GAPQPGAAGGGG--GGGSGGSPGPPGTGALHFQ---TFPSYSAANVLFPSAASFP-LTAA 309

Query: 792 AVLSPFV--LGSQTYGAPAFYAPHL 814
           A  SPF   LG  +Y  P FYAP L
Sbjct: 310 APGSPFAPFLG-PSYLTP-FYAPRL 332


>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score =  189 bits (479), Expect = 1e-47
 Identities = 160/385 (41%), Positives = 190/385 (49%), Gaps = 64/385 (16%)

Query: 435 GAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAAC-APCASAPCAPAPAASG 493
           G A+ A      SFSVLDILDP KF         L  V PA   A  + A       AS 
Sbjct: 7   GGAKAAPSHHKISFSVLDILDPQKFTR-----AALPAVRPAPREARKSLAEVEAGKDASS 61

Query: 494 RPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSG 553
           R P   +LE      A  +    A P ++ D   A            +G G    S   G
Sbjct: 62  RDP-VRQLETPGQGFAASLLTRQAHPHHSSDARDA------------AGPGAGQASPLEG 108

Query: 554 DEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAP 613
            E  ++ED ++   P     R  E A     GL               SP A     A+ 
Sbjct: 109 SEAEEEEDAEDPRRP-----RLRERAARLLPGLA-------------RSPDAPAGALASG 150

Query: 614 GPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQ 673
            P E+        GG    GG   +P G+  + +P+R+R   +    KPRRARTAFTYEQ
Sbjct: 151 EPCED--------GG----GGPVRSPPGSPGSPRPRRRRL--EPNCAKPRRARTAFTYEQ 196

Query: 674 LVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGG 733
           LVALENKF+ATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD +A   GG
Sbjct: 197 LVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQV-GG 255

Query: 734 GGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV--CAAQLPFLSSP 791
           G P PGA  G G  GG S  SP PP    L       +P++    ++   AA  P L++ 
Sbjct: 256 GAPQPGAAGGGG--GGGSGGSPGPPGTGALHFQ---TFPSYSAANVLFPSAASFP-LTAA 309

Query: 792 AVLSPFV--LGSQTYGAPAFYAPHL 814
           A  SPF   LG  +Y  P FYAP L
Sbjct: 310 APGSPFAPFLG-PSYLTP-FYAPRL 332


>gi|226437602 NK1 homeobox 2 [Homo sapiens]
          Length = 310

 Score =  184 bits (468), Expect = 2e-46
 Identities = 153/384 (39%), Positives = 185/384 (48%), Gaps = 84/384 (21%)

Query: 435 GAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAASGR 494
           G A+ A      SFSVLDILDP KF                          A  PA    
Sbjct: 7   GGAKAAPSHHKISFSVLDILDPQKFTR------------------------AALPAVRPA 42

Query: 495 PPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGD 554
           P  A +      AG         +  ++ DP +  + ET D  G         P A    
Sbjct: 43  PREARKSLAEVEAG---------KDASSRDPVR--QLETPDAAG---------PGAGQAS 82

Query: 555 EVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPG 614
            +   E ++E++A +    R  E A     GL               SP A     A+  
Sbjct: 83  PLEGSEAEEEEDAEDPRRPRLRERAARLLPGLAR-------------SPDAPAGALASGE 129

Query: 615 PRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQL 674
           P E+        GG    GG   +P G+  + +P+R+R   +    KPRRARTAFTYEQL
Sbjct: 130 PCED--------GG----GGPVRSPPGSPGSPRPRRRRL--EPNCAKPRRARTAFTYEQL 175

Query: 675 VALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGG 734
           VALENKF+ATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD +A   GGG
Sbjct: 176 VALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAAQV-GGG 234

Query: 735 GPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLV--CAAQLPFLSSPA 792
            P PGA  G G  GG S  SP PP    L       +P++    ++   AA  P L++ A
Sbjct: 235 APQPGAAGGGG--GGGSGGSPGPPGTGALHFQ---TFPSYSAANVLFPSAASFP-LTAAA 288

Query: 793 VLSPFV--LGSQTYGAPAFYAPHL 814
             SPF   LG  +Y  P FYAP L
Sbjct: 289 PGSPFAPFLG-PSYLTP-FYAPRL 310


>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
          Length = 348

 Score =  118 bits (296), Expect = 2e-26
 Identities = 103/304 (33%), Positives = 123/304 (40%), Gaps = 58/304 (19%)

Query: 500 ELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDD 559
           E   RAL G G +G     PP  G PF  G          + GG G   S D+ D     
Sbjct: 80  EARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYPRAHGGYGGGLSPDTSDR---- 135

Query: 560 EDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENS 619
                 ++PET    G  E      G   RG G  GA + +A+  A    AA  G  E S
Sbjct: 136 ------DSPETGEEMGRAE------GAWPRGPG-PGAVQREAAELAARGPAA--GTEEAS 180

Query: 620 PVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALEN 679
            +A  P       GG G                       G+ ++ RT F+  Q+  LE+
Sbjct: 181 ELAEVPAAAGETRGGVGVG--------------------GGRKKKTRTVFSRSQVFQLES 220

Query: 680 KFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-----------NPGAD--T 726
            F   RYLS  ER  LA SL LTETQVKIWFQNRR KWK+Q            PGA    
Sbjct: 221 TFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLV 280

Query: 727 SAPTGGGGGP--GPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQ 784
             P      P     AGP   LP  L+P +P+PP    LG  G   YP         AA 
Sbjct: 281 RVPVLYHESPPAAAAAGPPATLPFPLAPAAPAPPPPL-LGFSGALAYPL---AAFPAAAS 336

Query: 785 LPFL 788
           +PFL
Sbjct: 337 VPFL 340


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score =  111 bits (278), Expect = 2e-24
 Identities = 134/460 (29%), Positives = 171/460 (37%), Gaps = 83/460 (18%)

Query: 374 PPAGARVFGVWARGRLRRGCHKCADRAPRAPKAAAKAAPAKRTARRRXXXXDTVPAA-PE 432
           PP   R++G    GRL +G    A  A  A  AAA A    R            P   P+
Sbjct: 82  PPKLRRLYGPGG-GRLLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGERPD 140

Query: 433 GAGAARPAAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAAS 492
           GAGAA  AA     ++  L I    + +  R +                 AP  P P   
Sbjct: 141 GAGAAAAAAAAAAAAWDTLKISQAPQVSISRSKSYREN-----------GAPFVPPP--- 186

Query: 493 GRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADS 552
              P  +EL      G GGV         AG P  A  A           GGG     D 
Sbjct: 187 ---PALDEL-----GGPGGVTHPEERLGVAGGPGSAPAA-----------GGGTGTEDDE 227

Query: 553 GDEVPDDEDDDEDEA--PETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEA 610
            + + D+ED+DE+E    + E     ++AR     L      C  AA      GA    A
Sbjct: 228 EELLEDEEDEDEEEELLEDDEEELLEDDARA----LLKEPRRCPVAAT-----GAVAAAA 278

Query: 611 AAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSG----KPRRAR 666
           AA    E   ++P            G   + +   +       GSDS+ G    K RR R
Sbjct: 279 AAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLS------AGSDSEEGLLKRKQRRYR 332

Query: 667 TAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADT 726
           T FT  QL  LE  F+ T Y  V  R  LA+ L LTE +V++WFQNRR KW+K+      
Sbjct: 333 TTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQ 392

Query: 727 SAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPM--GAPLGMHGPAGYPAHGPGGLVCAAQ 784
           + P            PG   PG LS   P  P    +P   H PA   A        AA 
Sbjct: 393 THP------------PGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAA 440

Query: 785 LPFL------------SSPAVLSPFVLGSQTYGAPAFYAP 812
            P L             +P  LS F LG+  +  PAF +P
Sbjct: 441 FPSLPPPPGSASLPPSGAPLGLSTF-LGAAVFRHPAFISP 479


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score =  107 bits (268), Expect = 3e-23
 Identities = 107/315 (33%), Positives = 125/315 (39%), Gaps = 67/315 (21%)

Query: 476 ACAPCASAP-CAPAP---AASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEA 531
           +C+P +S P  APA    A S  PPR        L   G +GA G               
Sbjct: 57  SCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGG------------- 103

Query: 532 ETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGS 591
                 G   G GG    A  G                  AA  A  A  GG  LG    
Sbjct: 104 -----GGTGGGHGGPHHHAHPG--------------AAAAAAAAAAAAAAGGLALGLHPG 144

Query: 592 GCQGAAETDASP--------GATVDEAAA------PGPRENSPVAPGP-PGGAAAPG--G 634
           G QG A   A          G +   AAA      P    + P   G  P   A P   G
Sbjct: 145 GAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLG 204

Query: 635 AGTTP------QGTATAAKPKRKRTGSDSKS---GKPRRARTAFTYEQLVALENKFKATR 685
           AGT          TA    PK     S ++S   GK RR RTAFT +QL+ LE++FK  +
Sbjct: 205 AGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNK 264

Query: 686 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-----KQNPGADTSAPTGGGGGPGPGA 740
           YLS  +R  +A SL LTETQVKIWFQNRR KWK     K+    +     GGGGG G G 
Sbjct: 265 YLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGGAGKGG 324

Query: 741 GPGTGLPGGLSPLSP 755
               G    L P +P
Sbjct: 325 AEEPGAEELLGPPAP 339



 Score = 34.3 bits (77), Expect = 0.48
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 498 AEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVP 557
           A+E E++   G GG G  GAE P A +    G     D      G G         D   
Sbjct: 307 AQEAEKQK-GGGGGAGKGGAEEPGAEELL--GPPAPGD-----KGSGRRLRDLRDSDPEE 358

Query: 558 DDEDDDEDEAPETEAA 573
           D+++DDED  P +  A
Sbjct: 359 DEDEDDEDHFPYSNGA 374



 Score = 30.8 bits (68), Expect = 5.3
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 724 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPP 758
           A  ++ TGGGGG G  +G   G  G  SP S  PP
Sbjct: 35  AAAASGTGGGGGGGGASG---GTSGSCSPASSEPP 66



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 572 AARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAP-----GPP 626
           AA G     GGGG  G     C  A  +   P A  D   A  P     +A        P
Sbjct: 37  AASGTGGGGGGGGASGGTSGSCSPA--SSEPPAAPADRLRAESPSPPRLLAAHCALLPKP 94

Query: 627 GGAAAPGGAGTTPQG 641
           G   A GG G T  G
Sbjct: 95  GFLGAGGGGGGTGGG 109


>gi|4502365 NK3 homeobox 2 [Homo sapiens]
          Length = 333

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 102/306 (33%), Positives = 127/306 (41%), Gaps = 62/306 (20%)

Query: 446 TSFSVLDILDPNKFNSRRRRCVLLGPVA-PAACAPCASAPCAPAPAASGRPPRAEELERR 504
           TSFS+  IL     N +  R  L  P   PA     AS   APA                
Sbjct: 10  TSFSIQAIL-----NKKEERGGLAAPEGRPAPGGTAASVAAAPAVCCW------------ 52

Query: 505 ALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDE 564
            L G    GA G     A D   A  A T    G ++     SP     D    +E++  
Sbjct: 53  RLFGERDAGALGG----AEDSLLASPAGTRTAAGRTA----ESPEGWDSDSALSEENESR 104

Query: 565 DEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDA---SPGATVDEAAAPGPRENSPV 621
               +   ARGA  A   GG L      C+ AA  D    + G +  E +A    + SP 
Sbjct: 105 RRCAD---ARGASGAGLAGGSLSLGQPVCELAASKDLEEEAAGRSDSEMSASVSGDRSPR 161

Query: 622 AP----GPPGG------AAAPGGAGTTPQGTA------TAAKPKRKRTGSDSKSGKPRRA 665
                 GP G       + A GG G+ P G A       A KP++KR+            
Sbjct: 162 TEDDGVGPRGAHVSALCSGAGGGGGSGPAGVAEEEEEPAAPKPRKKRS------------ 209

Query: 666 RTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD 725
           R AF++ Q+  LE +F   RYLS  ER +LA SL LTETQVKIWFQNRR K K++   AD
Sbjct: 210 RAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRRQMAAD 269

Query: 726 --TSAP 729
              SAP
Sbjct: 270 LLASAP 275


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 79/233 (33%), Positives = 95/233 (40%), Gaps = 52/233 (22%)

Query: 601 ASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKP------------ 648
           A+P A      AP P   +P AP PP  A+ P  A   P     A  P            
Sbjct: 97  AAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIF 156

Query: 649 --------KRKRTGSDSKSGKP-------------RRARTAFTYEQLVALENKFKATRYL 687
                     K+  S S SG+              +RARTA+T  QLV LE +F   RYL
Sbjct: 157 PWMKESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYL 216

Query: 688 SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTGLP 747
               R+ +A  L+LTE Q+KIWFQNRR K+KK   G      +GG         PG G  
Sbjct: 217 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAG-- 274

Query: 748 GGLS------------PLSPSPPMGAPLGMHG--PAGYPAHGPGGLVCAAQLP 786
           G L+            P SP P    P G +G  PA YPA  P    CA   P
Sbjct: 275 GYLNSMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPASYPASLPS---CAPPPP 324


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 79/233 (33%), Positives = 95/233 (40%), Gaps = 52/233 (22%)

Query: 601 ASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKP------------ 648
           A+P A      AP P   +P AP PP  A+ P  A   P     A  P            
Sbjct: 97  AAPPAPQPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIF 156

Query: 649 --------KRKRTGSDSKSGKP-------------RRARTAFTYEQLVALENKFKATRYL 687
                     K+  S S SG+              +RARTA+T  QLV LE +F   RYL
Sbjct: 157 PWMKESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYL 216

Query: 688 SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTGLP 747
               R+ +A  L+LTE Q+KIWFQNRR K+KK   G      +GG         PG G  
Sbjct: 217 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAG-- 274

Query: 748 GGLS------------PLSPSPPMGAPLGMHG--PAGYPAHGPGGLVCAAQLP 786
           G L+            P SP P    P G +G  PA YPA  P    CA   P
Sbjct: 275 GYLNSMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPASYPASLPS---CAPPPP 324


>gi|4758168 distal-less homeobox 2 [Homo sapiens]
          Length = 328

 Score = 95.5 bits (236), Expect = 2e-19
 Identities = 86/276 (31%), Positives = 126/276 (45%), Gaps = 52/276 (18%)

Query: 537 NGYSSGGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGA 596
           +G  +G GG+S S+ S  +  +        A ++      +   GGGGG G       G+
Sbjct: 31  SGGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGG-GGSPYAHMGS 89

Query: 597 AETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSD 656
            +  AS    V  +A    + +  +       + AP G  ++P       +P+++    +
Sbjct: 90  YQYQASGLNNVPYSA----KSSYDLGYTAAYTSYAPYGTSSSPANN----EPEKEDLEPE 141

Query: 657 SK--SGKP---RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQ 711
            +  +GKP   R+ RT ++  QL AL+ +F+ T+YL++ ER  LA SL LT+TQVKIWFQ
Sbjct: 142 IRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQ 201

Query: 712 NRRTKWKK----------QNPGADTSAP-------------------TGGGGGPGPGAGP 742
           NRR+K+KK          Q+PGA  S P                     GGGGPG G G 
Sbjct: 202 NRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GS 260

Query: 743 GTGLPGGLSPLSPSPPMGAPLG----MHGPAGYPAH 774
           G G  G     SPS    A LG     H  +G  +H
Sbjct: 261 GAGSSGS----SPSSAASAFLGNYPWYHQTSGSASH 292


>gi|126116581 retina and anterior neural fold homeobox [Homo
           sapiens]
          Length = 346

 Score = 95.5 bits (236), Expect = 2e-19
 Identities = 84/249 (33%), Positives = 104/249 (41%), Gaps = 43/249 (17%)

Query: 572 AARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAA 631
           A RGA  A+     LGAR + C  A E  + P      A AP      P  P  PG A  
Sbjct: 53  AERGARGAKERDRRLGARPA-CPKAPEEGSEPSPPPAPAPAPEYEAPRPYCPKEPGEARP 111

Query: 632 PGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCE 691
             G    P G AT    + K +  +    K RR RT FT  QL  LE  F+ + Y  V  
Sbjct: 112 SPGL---PVGPATG---EAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165

Query: 692 RLNLALSLSLTETQVKIWFQNRRTKWKKQ--------------------NPGADTSAP-- 729
           R  LA  ++L E +V++WFQNRR KW++Q                    +P + T +P  
Sbjct: 166 REELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPLLSFSRSPPSATLSPLG 225

Query: 730 --TGGGGGPGPGAGP-----GTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCA 782
              G GGGP  GA P     G  LPGG +    S P   P     PA Y    P      
Sbjct: 226 AGPGSGGGPAGGALPLESWLGPPLPGGGATALQSLPGFGPPAQSLPASYTPPPP------ 279

Query: 783 AQLPFLSSP 791
              PFL+SP
Sbjct: 280 -PPPFLNSP 287


>gi|19923391 homeobox D3 [Homo sapiens]
          Length = 432

 Score = 94.4 bits (233), Expect = 4e-19
 Identities = 87/287 (30%), Positives = 121/287 (42%), Gaps = 44/287 (15%)

Query: 529 GEAETNDTNGYSSGGGGHSPSADSGD---EVPDDEDDDEDEAP-ETEAARGAE------- 577
           G ++T DT GYS+    + P A +     + P      +  AP    A +GAE       
Sbjct: 33  GYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMR 92

Query: 578 ----EARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPG 633
                ++GGGGG    G   +        P  T+  ++   P    P A  P GG  A  
Sbjct: 93  PGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVP-AKKPKGGPNASS 151

Query: 634 GAGTTPQGTATAAKPKRKRT---------GSDSKSGKP-----RRARTAFTYEQLVALEN 679
            + T  +      K  R+ +         G   +   P     +R RTA+T  QLV LE 
Sbjct: 152 SSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEK 211

Query: 680 KFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-----------NPGADTSA 728
           +F   RYL    R+ +A  L+LTE Q+KIWFQNRR K+KK            +   + S 
Sbjct: 212 EFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSP 271

Query: 729 PTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPL--GMHGPAGYPA 773
           P GG  G    +G    +P GL+  +PSPP  A     M+G A Y A
Sbjct: 272 PLGGAAGHVAYSGQLPPVP-GLAYDAPSPPAFAKSQPNMYGLAAYTA 317


>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
          Length = 327

 Score = 91.7 bits (226), Expect = 3e-18
 Identities = 74/217 (34%), Positives = 91/217 (41%), Gaps = 35/217 (16%)

Query: 610 AAAPGPRENSPVAPGPPGGAAAPGG----------AGTTPQGTATAAKPKRKRTGSDSKS 659
           A AP      P AP P G  AA                    +    K +  R  S S+ 
Sbjct: 110 ACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRD 169

Query: 660 G------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNR 713
                  KPR+ARTAFT  QL  LE  F+  +YLSV +R+ LA SL+LT+TQVK W+QNR
Sbjct: 170 SPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNR 229

Query: 714 RTKWKKQNP-GADTSAPTGGGGG-----PGP---------GAGPGTGLPGGLSPLSPSPP 758
           RTKWK+Q   G +  A  G         P P            PG  L     P +P P 
Sbjct: 230 RTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPA 289

Query: 759 MGAPLG----MHGPAGYPAHGPGGLVCAAQLPFLSSP 791
           +  PL     +HG  G     P     A  LP  + P
Sbjct: 290 LQRPLVPRILIHGLQGASEPPPPLPPLAGVLPRAAQP 326


>gi|33457326 GS homeobox 1 [Homo sapiens]
          Length = 264

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 62/142 (43%), Positives = 78/142 (54%), Gaps = 10/142 (7%)

Query: 612 APGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGS-DSKSGK---PRRART 667
           AP  R++S V+PG   G AA   A    Q +     P++    S DS S +    +R RT
Sbjct: 93  APLGRQHSAVSPGVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRT 152

Query: 668 AFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTS 727
           AFT  QL+ LE +F +  YLS   R+ +A  L+L+E QVKIWFQNRR K KK+  G   S
Sbjct: 153 AFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKG---S 209

Query: 728 APTGGGGGPGPGAGPGTGLPGG 749
              GGGGG   GAG G   P G
Sbjct: 210 NHRGGGGG---GAGGGGSAPQG 228


>gi|157426823 NK2 homeobox 4 [Homo sapiens]
          Length = 354

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 104/365 (28%), Positives = 132/365 (36%), Gaps = 60/365 (16%)

Query: 441 APLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEE 500
           +P   T FSV DIL P +   ++    + G  AP    P   AP   A A    PP    
Sbjct: 4   SPKHTTPFSVSDILSPIEETYKKFSGAMDG--AP----PGLGAPLGAAAAYRAPPPGPS- 56

Query: 501 LERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDE 560
                   +     AG +P +A     A  A        ++    H P   S        
Sbjct: 57  --------SQAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVS-------- 100

Query: 561 DDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSP 620
                + P            G  G L A   G +G A       AT    A P PR +S 
Sbjct: 101 -----QFPHGAMGSYCNGGLGNMGELPAYTDGMRGGA-------ATGWYGANPDPRYSSI 148

Query: 621 VA-PGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALEN 679
               GP  G    G    T  G A AAK       + + +   R+ R  F+  Q+  LE 
Sbjct: 149 SRFMGPSAGVNVAGMGSLT--GIADAAKSLGPLHAAAAAAAPRRKRRVLFSQAQVYELER 206

Query: 680 KFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ--NPGADTSAPTGGGGGPG 737
           +FK  +YLS  ER +LA  + LT TQVKIWFQN R K K+Q  +  A      GG G P 
Sbjct: 207 RFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPP 266

Query: 738 PGA--------------------GPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPG 777
           P                      G  T  PG   P  P+P     L    P+    HGPG
Sbjct: 267 PPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPG 326

Query: 778 GLVCA 782
           G + A
Sbjct: 327 GGLAA 331


>gi|126090909 engrailed homeobox 1 [Homo sapiens]
          Length = 392

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 90/332 (27%), Positives = 126/332 (37%), Gaps = 27/332 (8%)

Query: 398 DRAPRAPKAAAKAAPAKRT----ARRRXXXXDTVPAAPEGAGAA----RPAAPL-RPTSF 448
           D  P +P+ A  + PA       A          P  P+   A     +PAA L R T+F
Sbjct: 46  DSVPVSPQPAPPSPPAAPCLPPLAHHPHLPPHPPPPPPQHLAAPAHQPQPAAQLHRTTNF 105

Query: 449 SVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAG 508
            + +IL P+ F  ++ +             P      A A   +G   R E    +  AG
Sbjct: 106 FIDNILRPD-FGCKKEQ------------PPPQLLVAAAARGGAGGGGRVERDRGQTAAG 152

Query: 509 AGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDEDEAP 568
              V   G   P A     A +A     +G      G   S                 A 
Sbjct: 153 RDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAA 212

Query: 569 ETEAARGAEEARGGGGGLGARGSGCQGAAETD-ASPGATVDEAAAPGPRENSPVAPGPPG 627
              AA    +  GGG G GA   G QG    +  +P   +  +A  GP     V      
Sbjct: 213 AAAAAAKPSDTGGGGSGGGAGSPGAQGTKYPEHGNPAILLMGSANGGP----VVKTDSQQ 268

Query: 628 GAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYL 687
               P     T      ++ P+ ++        + +R RTAFT EQL  L+ +F+A RY+
Sbjct: 269 PLVWPAWVYCTRYSDRPSSGPRTRKLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYI 328

Query: 688 SVCERLNLALSLSLTETQVKIWFQNRRTKWKK 719
           +   R  LA  LSL E+Q+KIWFQN+R K KK
Sbjct: 329 TEQRRQTLAQELSLNESQIKIWFQNKRAKIKK 360


>gi|84570137 homeobox B3 [Homo sapiens]
          Length = 431

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 88/313 (28%), Positives = 120/313 (38%), Gaps = 77/313 (24%)

Query: 516 GAEPPNAGDPFKAGEAETNDTNGYSSGGGGHS---PSADSGDE-------VPDDEDDDED 565
           G+ PP+A        A T+ T+  S+GGG      P    G          P  ++  + 
Sbjct: 88  GSPPPSA--------APTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQT 139

Query: 566 EAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGP 625
              +  +   AE   GGGGG G  GSG  G                              
Sbjct: 140 SKLKNNSPGTAEGCGGGGGGGGGGGSGGSG------------------------------ 169

Query: 626 PGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATR 685
            GG    GG   +P G+A +                 +RARTA+T  QLV LE +F   R
Sbjct: 170 -GGGGGGGGGDKSPPGSAAS-----------------KRARTAYTSAQLVELEKEFHFNR 211

Query: 686 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTG 745
           YL    R+ +A  L+L+E Q+KIWFQNRR K+KK       ++ +GG    G    P   
Sbjct: 212 YLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQS 271

Query: 746 LPGGLSPL--------SPSPPMGAPLGMHGPAGYPAHGPGGLVCAAQLPFLSSPA-VLSP 796
             G ++ L        SPSPP       +  A    + P    C A   +  +PA    P
Sbjct: 272 TAGFMNALHSMTPSYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPAPEYEP 331

Query: 797 FVLGSQ--TYGAP 807
            VL +    YG P
Sbjct: 332 HVLQANGGAYGTP 344


>gi|84105335 mesenchyme homeobox 2 [Homo sapiens]
          Length = 304

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 57/145 (39%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 595 GAAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKP---KRK 651
           G  E  +SP      +++ G       +  P G A APG  G      A A K    KRK
Sbjct: 116 GPPELGSSPPVLCSNSSSLG-------SSTPTGAACAPGDYGRQALSPAEAEKRSGGKRK 168

Query: 652 RTGSDSKSG--------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTE 703
              SDS+ G        KPR+ RTAFT EQ+  LE +F    YL+   R  +A++L LTE
Sbjct: 169 SDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTE 228

Query: 704 TQVKIWFQNRRTKWKKQNPGADTSA 728
            QVK+WFQNRR KWK+   G   +A
Sbjct: 229 RQVKVWFQNRRMKWKRVKGGQQGAA 253


>gi|157743259 H6 family homeobox 3 [Homo sapiens]
          Length = 357

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 86/303 (28%), Positives = 121/303 (39%), Gaps = 42/303 (13%)

Query: 433 GAGAARPAAPLRP------TSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCA 486
           G  +A+P  P  P      + FS+ ++L+        R      P      AP ++A  A
Sbjct: 10  GTASAQPQPPPPPPPAPKESPFSIKNLLN----GDHHRPPPKPQPPPRTLFAPASAAAAA 65

Query: 487 PAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYS---SGG 543
            A AA+      E     AL+  G +     E P       A   E +    Y    +  
Sbjct: 66  AAAAAAAAKGALEGAAGFALSQVGDLAFPRFEIPAQRFALPAHYLERSPAWWYPYTLTPA 125

Query: 544 GGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASP 603
           GGH P  ++ ++         D +P +   R + E                      A P
Sbjct: 126 GGHLPRPEASEKALL-----RDSSPASGTDRDSPEPL------------------LKADP 162

Query: 604 GATVDEAAAPGP--RENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGK 661
                ++ +P     E S        G AAPG AG +    A     +  + G++S   K
Sbjct: 163 DHKELDSKSPDEIILEESDSEESKKEGEAAPGAAGASVGAAAATPGAEDWKKGAESPEKK 222

Query: 662 P----RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 717
           P    ++ RT F+  Q+  LE+ F   RYLS  ER  LA SL LTETQVKIWFQNRR KW
Sbjct: 223 PACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKW 282

Query: 718 KKQ 720
           K+Q
Sbjct: 283 KRQ 285


>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
          Length = 363

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 80/269 (29%), Positives = 109/269 (40%), Gaps = 45/269 (16%)

Query: 466 CVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDP 525
           C  LG   P+  A   + P    P  +   P     +  A A A     A    P  G  
Sbjct: 88  CAGLGQAVPSMVALTTALPSFAEPPDAFYGP-----QELAAAAAAAAATAARNNPEPGGR 142

Query: 526 FKAGEAETNDTNGYSSGGGGHSPS-----ADSGDEVPDD-----EDDDEDEAPETEAARG 575
              G  E ++            P      +++   +P +      D+++ EA   + A  
Sbjct: 143 RPEGGLEADELLPAREKVAEPPPPPPPHFSETFPSLPAEGKVYSSDEEKLEASAGDPAGS 202

Query: 576 AEEARGGGGGLGARGSGCQGAAETDAS-PGATVDEAAAPGPRENSPVAPGPPGGAAAPGG 634
            +E  G GG      S   G  ++ A  PGA +     P P+    +  G   GA  P  
Sbjct: 203 EQEEEGSGGD-----SEDDGFLDSSAGGPGALL----GPKPKLKGSLGTGAEEGA--PVT 251

Query: 635 AGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLN 694
           AG T  G                  GK RR RTAFT EQL+ LE +F   +YLS+ ER  
Sbjct: 252 AGVTAPG------------------GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQ 293

Query: 695 LALSLSLTETQVKIWFQNRRTKWKKQNPG 723
           +A +L L+E QVKIWFQNRR KWK+   G
Sbjct: 294 IAHALKLSEVQVKIWFQNRRAKWKRIKAG 322


>gi|210147470 NK2 transcription factor related, locus 6 [Homo
           sapiens]
          Length = 219

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 73/202 (36%), Positives = 91/202 (45%), Gaps = 32/202 (15%)

Query: 623 PGPPGGAAAPGGAGTT--PQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENK 680
           P P   AA+P G GT    +G   +    R       K+ + R+ R  F+  Q++ALE +
Sbjct: 9   PQPGLNAASPLGGGTRVPERGVGNSGDSVRGGRSEQPKARQRRKPRVLFSQAQVLALERR 68

Query: 681 FKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGG-------- 732
           FK  RYLS  ER +LA +L LT TQVKIWFQNRR K K+Q    D S    G        
Sbjct: 69  FKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQR--QDKSLELAGHPLTPRRV 126

Query: 733 -------GGGPGPGAGPGTGLPGGLSPLSPSPPMGA--PLGMHGPAGYPAHGPGGLVCAA 783
                   G P  G GPG       +P  PSP   A  P   +G      +G G   C A
Sbjct: 127 AVPVLVRDGKPCLGPGPG-------APAFPSPYSAAVSPYSCYGGYSGAPYGAGYGTCYA 179

Query: 784 QLPFLSSPAVLSPFVLGSQTYG 805
             P  S PA  +P  L S  +G
Sbjct: 180 GAP--SGPAPHTP--LASAGFG 197


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 86.7 bits (213), Expect = 8e-17
 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 21/154 (13%)

Query: 581 GGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGP---PGGAA-APGGAG 636
           G G  L ARG G +        PG      AAPG    +P AP P   PG  A +     
Sbjct: 68  GPGSALPARGHGQE--------PGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPK 119

Query: 637 TTPQGTA----TAAKPKRKRTGSDS-----KSGKPRRARTAFTYEQLVALENKFKATRYL 687
             P GTA        P  K+   +S       G+P+R+RTA+T +Q++ LE +F   RYL
Sbjct: 120 QPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYL 179

Query: 688 SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQN 721
           +   R+ +A +L L+E Q+KIWFQNRR KWKK +
Sbjct: 180 TRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 28/95 (29%)

Query: 722 PGADTSAPTGGGGGPGPGA------------GPGT--GLPGGLSPLSPSPPMGAPLGMHG 767
           P  D      GG GPGPG+            GPG     PG   P  P+PP   P  + G
Sbjct: 53  PRPDFGEQPFGGSGPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAPP---PAPLPG 109

Query: 768 PAGY----PAHGPGGLVCAAQLPFLSSPAVLSPFV 798
              Y    P   P G         L  PAV+ P++
Sbjct: 110 ARAYSQSDPKQPPSGTA-------LKQPAVVYPWM 137


>gi|7710121 engrailed homeobox 2 [Homo sapiens]
          Length = 333

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 77/246 (31%), Positives = 99/246 (40%), Gaps = 30/246 (12%)

Query: 500 ELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDD 559
           E  RR  AG    GA G     AG     GE   +   G   G GG      SG   P  
Sbjct: 78  EFGRRKDAGTCCAGAGGGRGGGAG-----GEGGASGAEG-GGGAGGSEQLLGSGSREPRQ 131

Query: 560 EDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVD---EAAAPGPR 616
                  A     A G++    G GG  ++     G A+    PG  +D   +A   G  
Sbjct: 132 NPPCAPGAGGPLPAAGSDSPGDGEGG--SKTLSLHGGAKKGGDPGGPLDGSLKARGLGGG 189

Query: 617 ENSPVAPGPPGGAAAPGGA--------------GTTPQGTATAAKPKRKRTGSDSKSGKP 662
           + S  +      A A  GA                 P     + KPK+K    + K    
Sbjct: 190 DLSVSSDSDSSQAGANLGAQPMLWPAWVYCTRYSDRPSSGPRSRKPKKKNPNKEDK---- 245

Query: 663 RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP 722
            R RTAFT EQL  L+ +F+  RYL+   R +LA  LSL E+Q+KIWFQN+R K KK   
Sbjct: 246 -RPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATG 304

Query: 723 GADTSA 728
             +T A
Sbjct: 305 NKNTLA 310


>gi|4503615 even-skipped homeobox 1 [Homo sapiens]
          Length = 407

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 101/348 (29%), Positives = 126/348 (36%), Gaps = 81/348 (23%)

Query: 472 VAPAACAPCASAPCAPAPAASGRPPRAEELERRALAG-AGGVGAAGAEPPNAGDPFKAGE 530
           + P  C    + P A      G P      E   + G AG     GAEP  AG       
Sbjct: 42  MVPRGCLSPRAVPPATRERGGGGP------EEEPVDGLAGSAAGPGAEPQVAGAAML--- 92

Query: 531 AETNDTNGYSSGGGGHSPSADS--GDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGA 588
                      G G  +PS DS  G   P   D + D   E E +   + A G      +
Sbjct: 93  -----------GPGPPAPSVDSLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQHS 141

Query: 589 RGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKP 648
           +GSG +                 +P     +P + G  GG    GG+    QGT      
Sbjct: 142 KGSGSEALV-------------GSPNGGSETPKSNGGSGG----GGS----QGTLAC--- 177

Query: 649 KRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKI 708
                   S S + RR RTAFT EQ+  LE +F    Y+S   R  LA +L+L ET +K+
Sbjct: 178 --------SASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKV 229

Query: 709 WFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPG--------TGLPGGLSPLSPSP-PM 759
           WFQNRR K K+Q        P          A P             GGL    P P P 
Sbjct: 230 WFQNRRMKDKRQRLAMTWPHP----------ADPAFYTYMMSHAAAAGGL----PYPFPS 275

Query: 760 GAPLGMHGPAGYPAHGPGGLVCAAQLPFLSSPAVLSPFVLGSQTYGAP 807
             PL  + P G    G      AA  PF  S   L  F + SQ Y  P
Sbjct: 276 HLPLPYYSPVGL---GAASAASAAASPFSGSLRPLDTFRVLSQPYPRP 320


>gi|6633798 BarH-like homeobox 2 [Homo sapiens]
          Length = 279

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 8/114 (7%)

Query: 629 AAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLS 688
           A APGG       + T     R++        KPRR+RT FT  QL+ LE KF+  +YLS
Sbjct: 108 AEAPGGEALASSESETEQPTPRQK--------KPRRSRTIFTELQLMGLEKKFQKQKYLS 159

Query: 689 VCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGP 742
             +RL+LA SL LT+ QVK W+QNRR KWKK        APT   G P   + P
Sbjct: 160 TPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIP 213


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 59/167 (35%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 611 AAPGPRENSPVAPGPPGGAAAPGG----AGTTP---QGTATAAKPKRKR-----TGSDSK 658
           AAP   E +P  PG P G +AP      A  +P   +G      P  K+           
Sbjct: 152 AAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYN 211

Query: 659 SGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 718
            G+P+R+RTA+T +Q++ LE +F   RYL+   R+ +A +L L+E QVKIWFQNRR KWK
Sbjct: 212 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 271

Query: 719 KQN--PGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPL 763
           K +  P     +        GP     T  P  L P  P P    P+
Sbjct: 272 KDHKLPNTKMRSSNSASASAGPPGKAQTQSP-HLHP-HPHPSTSTPV 316


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,237,490
Number of Sequences: 37866
Number of extensions: 3330992
Number of successful extensions: 39297
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 1557
Number of HSP's that attempted gapping in prelim test: 20442
Number of HSP's gapped (non-prelim): 15584
length of query: 814
length of database: 18,247,518
effective HSP length: 111
effective length of query: 703
effective length of database: 14,044,392
effective search space: 9873207576
effective search space used: 9873207576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.