Guide to the Human Genome
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Search of human proteins with 239753040

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo
sapiens]
         (244 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo ...   498   e-141
gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo ...   498   e-141
gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo ...   498   e-141
gi|51173735 ras responsive element binding protein 1 isoform 2 [...    37   0.016
gi|51173737 ras responsive element binding protein 1 isoform 1 [...    37   0.016
gi|239752808 PREDICTED: similar to c-jun [Homo sapiens]                35   0.046
gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo ...    35   0.046
gi|239741179 PREDICTED: hypothetical protein XP_002342128 [Homo ...    35   0.046
gi|148833504 interleukin 16 isoform 2 [Homo sapiens]                   35   0.046
gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens]          35   0.046
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    35   0.046
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    35   0.078
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    35   0.078
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    35   0.078
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]            34   0.10 
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ...    34   0.10 
gi|11038659 ADAM metallopeptidase with thrombospondin type 1 mot...    34   0.10 
gi|110825974 ADAM metallopeptidase with thrombospondin type 1 mo...    34   0.10 
gi|23510413 sorting nexin 26 [Homo sapiens]                            34   0.10 
gi|40807447 papillary renal cell carcinoma translocation-associa...    34   0.10 
gi|40807450 papillary renal cell carcinoma translocation-associa...    34   0.10 
gi|4503421 dual specificity phosphatase 9 [Homo sapiens]               34   0.13 
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho...    33   0.17 
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho...    33   0.17 
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho...    33   0.17 
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom...    33   0.17 
gi|52630419 sterol regulatory element binding transcription fact...    33   0.23 
gi|22547195 sterol regulatory element binding transcription fact...    33   0.23 
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat...    33   0.23 
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat...    33   0.23 

>gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo
           sapiens]
          Length = 244

 Score =  498 bits (1282), Expect = e-141
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
           MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
           LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120

Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
           VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180

Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
           DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240

Query: 241 KPPP 244
           KPPP
Sbjct: 241 KPPP 244


>gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo
           sapiens]
          Length = 244

 Score =  498 bits (1282), Expect = e-141
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
           MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
           LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120

Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
           VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180

Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
           DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240

Query: 241 KPPP 244
           KPPP
Sbjct: 241 KPPP 244


>gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo
           sapiens]
          Length = 244

 Score =  498 bits (1282), Expect = e-141
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
           MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1   MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
           LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120

Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
           VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180

Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
           DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240

Query: 241 KPPP 244
           KPPP
Sbjct: 241 KPPP 244


>gi|51173735 ras responsive element binding protein 1 isoform 2 [Homo
            sapiens]
          Length = 1687

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 21/188 (11%)

Query: 14   PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSG-------LLGAL-LAVGC 65
            P  +   S +PSP        P  L PS + + P AP   +        L G + LAV  
Sbjct: 959  PEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPLQGPVQLAVPI 1018

Query: 66   VAGRSSEAPPPPRLLAQPALV--LLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTG 123
             +     +PP   L+   AL+    LLR L      LLP PP+   LP L ++  A +  
Sbjct: 1019 YSSALVSSPP---LVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLASI--AQIIS 1073

Query: 124  ALITVVWCRERSLPSVRSVSLGAMSRDSESL------LSLSASPSERLGLLSSCSPSAAG 177
            ++ +     +  +      S G+ +  S+SL       + +A+P+       S  P A  
Sbjct: 1074 SVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKESSEPPAPA 1133

Query: 178  APPDGFSP 185
            + P+  SP
Sbjct: 1134 SSPEAASP 1141


>gi|51173737 ras responsive element binding protein 1 isoform 1 [Homo
            sapiens]
          Length = 1742

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 21/188 (11%)

Query: 14   PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSG-------LLGAL-LAVGC 65
            P  +   S +PSP        P  L PS + + P AP   +        L G + LAV  
Sbjct: 959  PEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPLQGPVQLAVPI 1018

Query: 66   VAGRSSEAPPPPRLLAQPALV--LLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTG 123
             +     +PP   L+   AL+    LLR L      LLP PP+   LP L ++  A +  
Sbjct: 1019 YSSALVSSPP---LVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLASI--AQIIS 1073

Query: 124  ALITVVWCRERSLPSVRSVSLGAMSRDSESL------LSLSASPSERLGLLSSCSPSAAG 177
            ++ +     +  +      S G+ +  S+SL       + +A+P+       S  P A  
Sbjct: 1074 SVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKESSEPPAPA 1133

Query: 178  APPDGFSP 185
            + P+  SP
Sbjct: 1134 SSPEAASP 1141


>gi|239752808 PREDICTED: similar to c-jun [Homo sapiens]
          Length = 324

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 77  PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
           PR+L    L  ++ RLL LL L L PP PL P   A   A M AP+TG      L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229

Query: 131 ----CRERSLPSVR 140
                R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243


>gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo
           sapiens]
          Length = 324

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 77  PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
           PR+L    L  ++ RLL LL L L PP PL P   A   A M AP+TG      L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229

Query: 131 ----CRERSLPSVR 140
                R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243


>gi|239741179 PREDICTED: hypothetical protein XP_002342128 [Homo
           sapiens]
          Length = 324

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 77  PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
           PR+L    L  ++ RLL LL L L PP PL P   A   A M AP+TG      L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229

Query: 131 ----CRERSLPSVR 140
                R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243


>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
          Length = 1332

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 71   SEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVW 130
            SE+PPP R   QP               K LPP P   PL  LL+       G ++ +  
Sbjct: 920  SESPPPGR---QP-------------NQKTLPPGP--DPLLRLLSTQAEESQGPVLKMPS 961

Query: 131  CRERSLPSVRSVSLGAMSRDSES--LLSLSASPSERLGLLSSCSPSAAGA------PPDG 182
             R RS P  RS S      D ++  L S+S+  S  +     C PS+         P +G
Sbjct: 962  QRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEG 1021

Query: 183  FSPASLS 189
             SP S S
Sbjct: 1022 ASPTSSS 1028


>gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens]
          Length = 631

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 26/127 (20%)

Query: 71  SEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVW 130
           SE+PPP R   QP               K LPP P   PL  LL+       G ++ +  
Sbjct: 219 SESPPPGR---QP-------------NQKTLPPGP--DPLLRLLSTQAEESQGPVLKMPS 260

Query: 131 CRERSLPSVRSVSLGAMSRDSES--LLSLSASPSERLGLLSSCSPSAAGA------PPDG 182
            R RS P  RS S      D ++  L S+S+  S  +     C PS+         P +G
Sbjct: 261 QRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEG 320

Query: 183 FSPASLS 189
            SP S S
Sbjct: 321 ASPTSSS 327


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 24/124 (19%)

Query: 68  GRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPAL-----LAVMRAPVT 122
           GR ++A P  RLL  P    L+  L         PPPP  PP PAL     ++V      
Sbjct: 402 GRKADAGPEGRLLPLPMPTGLVAALAE-------PPPPPPPPPPALPGPGPVSVPELKPE 454

Query: 123 GALITVVWCRERSLPSVR---------SVSLGAMSRDSESLLSLSASPS---ERLGLLSS 170
            +   VV  R+     VR          VSLG  ++ +  + SLS+S S   + LGL  S
Sbjct: 455 SSQTPVVSTRKGKCRGVRRMVVKMAKIPVSLGRRNKTTYKVSSLSSSLSVEGKELGLRVS 514

Query: 171 CSPS 174
             P+
Sbjct: 515 AEPT 518


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 34.7 bits (78), Expect = 0.078
 Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)

Query: 14  PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
           PS   ++  +P P LG  +  P P   ST    PS+P   +  L +      +      +
Sbjct: 712 PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 771

Query: 74  PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
           PPP      P L +              PPPPLLP  PLPA  +        +P++ A  
Sbjct: 772 PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 815

Query: 125 ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
                 L   V      +P V  + + A S    +L S S+S S      SS S S+   
Sbjct: 816 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 874

Query: 179 PP 180
           PP
Sbjct: 875 PP 876


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 34.7 bits (78), Expect = 0.078
 Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)

Query: 14   PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
            PS   ++  +P P LG  +  P P   ST    PS+P   +  L +      +      +
Sbjct: 913  PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 972

Query: 74   PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
            PPP      P L +              PPPPLLP  PLPA  +        +P++ A  
Sbjct: 973  PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 1016

Query: 125  ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
                  L   V      +P V  + + A S    +L S S+S S      SS S S+   
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 1075

Query: 179  PP 180
            PP
Sbjct: 1076 PP 1077


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 34.7 bits (78), Expect = 0.078
 Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)

Query: 14   PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
            PS   ++  +P P LG  +  P P   ST    PS+P   +  L +      +      +
Sbjct: 913  PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 972

Query: 74   PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
            PPP      P L +              PPPPLLP  PLPA  +        +P++ A  
Sbjct: 973  PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 1016

Query: 125  ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
                  L   V      +P V  + + A S    +L S S+S S      SS S S+   
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 1075

Query: 179  PP 180
            PP
Sbjct: 1076 PP 1077


>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 55/176 (31%), Positives = 66/176 (37%), Gaps = 35/176 (19%)

Query: 14  PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
           P R H   T+   W  G  + P          +PS   +G  LL  LL    +       
Sbjct: 74  PRRPHQRGTEAVKWKDGGLRDPGQWTSEPEQTEPSPCLSGCLLLLLLLTPFLLL------ 127

Query: 74  PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVWCRE 133
                LL  P L+LL L LLAL     LP   LL PL  LL     P+   L   ++   
Sbjct: 128 ----HLLLLPLLLLLPLFLLAL----SLPLFFLLLPLFLLL-----PLFLPLFIPLFLLP 174

Query: 134 RSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPPDGFSPASLS 189
            S PS         S  S S  S S+SP       SS SP     PP  FS +S S
Sbjct: 175 SSSPS---------SSSSPSYSSPSSSP-------SSSSPLPPPPPPPSFSSSSSS 214


>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
           sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 55/176 (31%), Positives = 66/176 (37%), Gaps = 35/176 (19%)

Query: 14  PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
           P R H   T+   W  G  + P          +PS   +G  LL  LL    +       
Sbjct: 74  PRRPHQRGTEAVKWKDGGLRDPGQWTSEPEQTEPSPCLSGCLLLLLLLTPFLLL------ 127

Query: 74  PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVWCRE 133
                LL  P L+LL L LLAL     LP   LL PL  LL     P+   L   ++   
Sbjct: 128 ----HLLLLPLLLLLPLFLLAL----SLPLFFLLLPLFLLL-----PLFLPLFIPLFLLP 174

Query: 134 RSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPPDGFSPASLS 189
            S PS         S  S S  S S+SP       SS SP     PP  FS +S S
Sbjct: 175 SSSPS---------SSSSPSYSSPSSSP-------SSSSPLPPPPPPPSFSSSSSS 214


>gi|11038659 ADAM metallopeptidase with thrombospondin type 1 motif,
           2 isoform 2 [Homo sapiens]
          Length = 566

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 76  PPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGAL 125
           PP   A+  L   LL LL LL   LLPPPP  PP  A LA    P  G L
Sbjct: 3   PPAGAARRLLCPALLLLLLLLPPPLLPPPP--PPANARLAAAADPPGGPL 50


>gi|110825974 ADAM metallopeptidase with thrombospondin type 1
           motif, 2 isoform 1 preproprotein [Homo sapiens]
          Length = 1211

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 76  PPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGAL 125
           PP   A+  L   LL LL LL   LLPPPP  PP  A LA    P  G L
Sbjct: 3   PPAGAARRLLCPALLLLLLLLPPPLLPPPP--PPANARLAAAADPPGGPL 50


>gi|23510413 sorting nexin 26 [Homo sapiens]
          Length = 1126

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 20/82 (24%)

Query: 23  KPSPWLGGCTQGPDP--LRPSTV-------YKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
           KP PWLGG    P P   RP TV        +  S+  +G+ LLGA        G  + A
Sbjct: 607 KPLPWLGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAELLGA-------GGAPASA 659

Query: 74  PPPPRL----LAQPALVLLLLR 91
            P P L      +P L+ LLLR
Sbjct: 660 TPTPALSPGRSLRPHLIPLLLR 681


>gi|40807447 papillary renal cell carcinoma translocation-associated
           gene product isoform 1 [Homo sapiens]
          Length = 491

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 35  PDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLA 94
           PD   P    ++  AP +G  L G   ++    G  +  PPPP++LA PA    LL    
Sbjct: 14  PDEAEPEPEEEEAVAPTSGPALGGLFASLPAPKG-PALLPPPPQMLA-PAFPPPLLLPPP 71

Query: 95  LLKLKLLPPPPL------LPPLPAL 113
               +L PPPPL       PP P +
Sbjct: 72  TGDPRLQPPPPLPFGLGGFPPPPGV 96


>gi|40807450 papillary renal cell carcinoma translocation-associated
           gene product isoform 2 [Homo sapiens]
          Length = 459

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 35  PDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLA 94
           PD   P    ++  AP +G  L G   ++    G  +  PPPP++LA PA    LL    
Sbjct: 14  PDEAEPEPEEEEAVAPTSGPALGGLFASLPAPKG-PALLPPPPQMLA-PAFPPPLLLPPP 71

Query: 95  LLKLKLLPPPPL------LPPLPAL 113
               +L PPPPL       PP P +
Sbjct: 72  TGDPRLQPPPPLPFGLGGFPPPPGV 96


>gi|4503421 dual specificity phosphatase 9 [Homo sapiens]
          Length = 384

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 21/73 (28%)

Query: 61  LAVGCVAGRSSEAPPPPRLL---------------------AQPALVLLLLRLLALLKLK 99
           L   C+  R   +PP PRLL                     A PAL+L  LR  +L    
Sbjct: 4   LGRSCLWLRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRA 63

Query: 100 LLPPPPLLPPLPA 112
           LLP PPL PP PA
Sbjct: 64  LLPGPPLQPPPPA 76


>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)

Query: 11  PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
           P LPS       R    ST P P        P P  P+T  + P+ P   + L    G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
                        P PP   A P    + +  L   +++ LPPPP  PPLP       +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442

Query: 121 VT 122
           VT
Sbjct: 443 VT 444


>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)

Query: 11  PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
           P LPS       R    ST P P        P P  P+T  + P+ P   + L    G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
                        P PP   A P    + +  L   +++ LPPPP  PPLP       +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442

Query: 121 VT 122
           VT
Sbjct: 443 VT 444


>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)

Query: 11  PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
           P LPS       R    ST P P        P P  P+T  + P+ P   + L    G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
                        P PP   A P    + +  L   +++ LPPPP  PPLP       +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442

Query: 121 VT 122
           VT
Sbjct: 443 VT 444


>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)

Query: 11  PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
           P LPS       R    ST P P        P P  P+T  + P+ P   + L    G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382

Query: 61  LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
                        P PP   A P    + +  L   +++ LPPPP  PPLP       +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442

Query: 121 VT 122
           VT
Sbjct: 443 VT 444


>gi|52630419 sterol regulatory element binding transcription factor
           1 isoform a [Homo sapiens]
          Length = 1177

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 38/138 (27%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 50  PWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPP 109
           P+AGSG  G   A    +   S +PPP  L +          L A L      P PL PP
Sbjct: 80  PYAGSGAGGTDPASPDTSSPGSLSPPPATLSSS---------LEAFLSGPQAAPSPLSPP 130

Query: 110 LPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLS 169
            PA   +   P   A       +E S+P   S+      +     L   + P+      S
Sbjct: 131 QPAPTPLKMYPSMPAFSPGPGIKEESVP--LSILQTPTPQPLPGALLPQSFPAPAPPQFS 188

Query: 170 SCSPSAAGAPPDGFSPAS 187
           S       +PP GFS  S
Sbjct: 189 STPVLGYPSPPGGFSTGS 206


>gi|22547195 sterol regulatory element binding transcription factor
           1 isoform b [Homo sapiens]
          Length = 1147

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 38/138 (27%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 50  PWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPP 109
           P+AGSG  G   A    +   S +PPP  L +          L A L      P PL PP
Sbjct: 50  PYAGSGAGGTDPASPDTSSPGSLSPPPATLSSS---------LEAFLSGPQAAPSPLSPP 100

Query: 110 LPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLS 169
            PA   +   P   A       +E S+P   S+      +     L   + P+      S
Sbjct: 101 QPAPTPLKMYPSMPAFSPGPGIKEESVP--LSILQTPTPQPLPGALLPQSFPAPAPPQFS 158

Query: 170 SCSPSAAGAPPDGFSPAS 187
           S       +PP GFS  S
Sbjct: 159 STPVLGYPSPPGGFSTGS 176


>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform a [Homo sapiens]
          Length = 629

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 27/97 (27%)

Query: 24  PSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLG----ALLAVGCVAGRSSEAPPPPRL 79
           P P +  C      + PS    QP  PWAG  +      A  +   + G  ++ PP PR 
Sbjct: 493 PGPPITDCEMNSPQVPPS----QPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRY 548

Query: 80  LAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAV 116
           L +                   PP P  PP P L+ V
Sbjct: 549 LGR-------------------PPSPTSPPPPELMDV 566


>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform c [Homo sapiens]
          Length = 601

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 27/97 (27%)

Query: 24  PSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLG----ALLAVGCVAGRSSEAPPPPRL 79
           P P +  C      + PS    QP  PWAG  +      A  +   + G  ++ PP PR 
Sbjct: 465 PGPPITDCEMNSPQVPPS----QPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRY 520

Query: 80  LAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAV 116
           L +                   PP P  PP P L+ V
Sbjct: 521 LGR-------------------PPSPTSPPPPELMDV 538


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,643,298
Number of Sequences: 37866
Number of extensions: 724251
Number of successful extensions: 4409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 4043
Number of HSP's gapped (non-prelim): 469
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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