LOC100133583 19739

Name: LOC100133583	Sequence: fasta or formatted (281aa)		NCBI GI: 239748788
Description: PREDICTED: similar to major histocompatibility complex, class II, DR beta 5 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {261aa} PREDICTED: similar to major histocompatibility complex, class II,...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 14 2 C cysteine 2.1 6 1 D aspartate 3.6 10 1 E glutamate 7.1 20 2 F phenylalanine 3.6 10 1 G glycine 6.8 19 2 H histidine 2.5 7 2 I isoleucine 4.6 13 2 K lysine 3.2 9 2 L leucine 10.0 28 2 M methionine 2.5 7 1 N asparagine 2.8 8 1 P proline 4.6 13 1 Q glutamine 5.0 14 1 R arginine 9.3 26 2 S serine 7.1 20 1 T threonine 7.1 20 2 V valine 8.5 24 2 W tryptophan 2.1 6 1 Y tyrosine 2.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.995 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.995 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.989 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.989 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.927 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.856 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.846 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.793 major histocompatibility complex, class II, DQ beta... HLA-DRB5 0.583 major histocompatibility complex, class II, DR beta ... LOC100290966 0.581 PREDICTED: hypothetical protein XP_002346811 LOC100294468 0.578 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB1 0.576 major histocompatibility complex, class II, DR beta... HLA-DPB1 0.574 major histocompatibility complex, class II, DP beta ... LOC100294189 0.572 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.572 PREDICTED: similar to HLA class II histocompatibili... LOC100294276 0.570 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.558 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.556 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.554 major histocompatibility complex, class II, DR beta ... HLA-DRB3 0.552 major histocompatibility complex, class II, DR beta ... LOC100294275 0.547 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.534 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.534 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.514 PREDICTED: major histocompatibility complex, class ... HLA-DOB 0.505 major histocompatibility complex, class II, DO beta p... LOC100294036 0.475 PREDICTED: similar to HLA class II histocompatibili... LOC100133811 0.410 PREDICTED: similar to HLA class II histocompatibili... LOC651845 0.298 PREDICTED: similar to MHC class II antigen LOC100133661 0.188 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.