| Name: LOC100288130 | Sequence: fasta or formatted (196aa) | NCBI GI: 239744837 | |
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Description: PREDICTED: hypothetical protein XP_002343283
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.2 18 2 C cysteine 3.1 6 1 D aspartate 2.6 5 1 E glutamate 11.7 23 2 F phenylalanine 3.1 6 2 G glycine 5.1 10 2 H histidine 5.6 11 2 I isoleucine 0.5 1 1 K lysine 4.6 9 2 L leucine 7.7 15 2 M methionine 1.5 3 1 N asparagine 2.6 5 1 P proline 10.2 20 2 Q glutamine 4.1 8 1 R arginine 7.7 15 2 S serine 11.7 23 3 T threonine 4.6 9 1 V valine 2.0 4 1 W tryptophan 0.5 1 1 Y tyrosine 2.0 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343283 LOC100292155 0.987 PREDICTED: similar to hCG1790963 LOC100290086 0.987 PREDICTED: hypothetical protein XP_002347438 KIAA0802 0.272 hypothetical protein LOC23255 TNKS1BP1 0.036 tankyrase 1-binding protein 1 SMAD6 0.034 SMAD family member 6 isoform 1 SCAF1 0.031 SR-related CTD-associated factor 1 DPCR1 0.028 diffuse panbronchiolitis critical region 1 protein ... ANKRD57 0.026 ankyrin repeat domain 57 MICALL2 0.026 MICAL-like 2 isoform 1 SHANK1 0.023 SH3 and multiple ankyrin repeat domains 1 PSRC1 0.023 proline/serine-rich coiled-coil 1 isoform a PSRC1 0.023 proline/serine-rich coiled-coil 1 isoform a SMAD9 0.021 SMAD family member 9 isoform b ZNF710 0.021 zinc finger protein 710 PSRC1 0.021 proline/serine-rich coiled-coil 1 isoform b KIAA0408 0.021 hypothetical protein LOC9729 APC2 0.021 adenomatosis polyposis coli 2 SMAD9 0.021 SMAD family member 9 isoform a LOC100292723 0.021 PREDICTED: hypothetical protein PCLO 0.021 piccolo isoform 2 PCLO 0.021 piccolo isoform 1 SRRM2 0.021 splicing coactivator subunit SRm300 GNAS 0.018 GNAS complex locus NESP55 CCDC50 0.018 Ymer protein long isoform CACNA1G 0.018 voltage-dependent calcium channel alpha 1G subunit i... UBN2 0.018 ubinuclein 2 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 LOC727838 0.018 PREDICTED: similar to cancer/testis antigen family ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
