Guide to the Human Genome
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Search of human proteins with 239744460

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744460 PREDICTED: hypothetical protein [Homo sapiens]
         (506 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239744460 PREDICTED: hypothetical protein [Homo sapiens]          1064   0.0  
gi|239755681 PREDICTED: hypothetical protein [Homo sapiens]          1062   0.0  
gi|239750150 PREDICTED: hypothetical protein [Homo sapiens]          1062   0.0  
gi|169203160 PREDICTED: hypothetical protein [Homo sapiens]           855   0.0  
gi|169203656 PREDICTED: hypothetical protein [Homo sapiens]           855   0.0  
gi|169202387 PREDICTED: hypothetical protein [Homo sapiens]           855   0.0  
gi|39653317 jumonji domain containing 2D [Homo sapiens]               668   0.0  
gi|45504380 jumonji domain containing 2B [Homo sapiens]               544   e-155
gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens]    509   e-144
gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens]    509   e-144
gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]    509   e-144
gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]    509   e-144
gi|98986459 jumonji domain containing 2A [Homo sapiens]               498   e-141
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...   151   1e-36
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...   151   1e-36
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H...   143   3e-34
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H...   142   7e-34
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H...   142   7e-34
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H...   141   1e-33
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho...   141   1e-33
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]     133   3e-31
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ...   133   3e-31
gi|11863152 jumonji, AT rich interactive domain 2 protein [Homo ...    80   4e-15
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i...    39   0.009
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s...    39   0.009
gi|169160654 PREDICTED: similar to small nuclear ribonucleoprote...    37   0.042
gi|5902102 small nuclear ribonucleoprotein D1 polypeptide 16kDa ...    37   0.042
gi|110681708 zinc finger protein 579 [Homo sapiens]                    37   0.055
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]                35   0.12 
gi|134031945 SCO-spondin [Homo sapiens]                                35   0.12 

>gi|239744460 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 506

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 506/506 (100%), Positives = 506/506 (100%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD
Sbjct: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT
Sbjct: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL
Sbjct: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480

Query: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506
           MGTRSRAQGHRPQLPLANDLMTNLSL
Sbjct: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506


>gi|239755681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 506

 Score = 1062 bits (2747), Expect = 0.0
 Identities = 505/506 (99%), Positives = 506/506 (100%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPH+NFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHRNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD
Sbjct: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT
Sbjct: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL
Sbjct: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480

Query: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506
           MGTRSRAQGHRPQLPLANDLMTNLSL
Sbjct: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506


>gi|239750150 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 506

 Score = 1062 bits (2747), Expect = 0.0
 Identities = 505/506 (99%), Positives = 506/506 (100%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPH+NFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHRNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD
Sbjct: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT
Sbjct: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL
Sbjct: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480

Query: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506
           MGTRSRAQGHRPQLPLANDLMTNLSL
Sbjct: 481 MGTRSRAQGHRPQLPLANDLMTNLSL 506


>gi|169203160 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 638

 Score =  855 bits (2208), Expect = 0.0
 Identities = 420/503 (83%), Positives = 440/503 (87%), Gaps = 17/503 (3%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAH+AGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHRAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYR LANSKKYQTPPHQNFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRHLANSKKYQTPPHQNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQ LE LARELFP  SRGCE FLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLK+NGIPFN MTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKKNGIPFNRMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GK+ASQCSCGE+ VTFSMD FVRI+QPESYELWKHRQDL +V++ EPRVAESQE SNWR+
Sbjct: 301 GKVASQCSCGEARVTFSMDAFVRILQPESYELWKHRQDLTVVDYMEPRVAESQEPSNWRE 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DI LRRAALGLR L N    CPT+ V+   CYNPKG GTDAVPGSA Q+           
Sbjct: 361 DIALRRAALGLRHLRNHITSCPTRTVAPRLCYNPKGGGTDAVPGSAIQA----------- 409

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           L  SA VL PSTG WG  RG GRG+G      RGRG G   RELGTEE TVQ A+KRRL 
Sbjct: 410 LETSAWVLPPSTGRWGPCRGCGRGRG------RGRGRGRRPRELGTEETTVQSAAKRRLS 463

Query: 481 MGTRSRAQGHRPQLPLANDLMTN 503
           +GT SRA G +PQL  A++ +T+
Sbjct: 464 VGTGSRAPGRKPQLQFADEALTD 486


>gi|169203656 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 638

 Score =  855 bits (2208), Expect = 0.0
 Identities = 420/503 (83%), Positives = 440/503 (87%), Gaps = 17/503 (3%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAH+AGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHRAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYR LANSKKYQTPPHQNFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRHLANSKKYQTPPHQNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQ LE LARELFP  SRGCE FLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLK+NGIPFN MTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKKNGIPFNRMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GK+ASQCSCGE+ VTFSMD FVRI+QPESYELWKHRQDL +V++ EPRVAESQE SNWR+
Sbjct: 301 GKVASQCSCGEARVTFSMDAFVRILQPESYELWKHRQDLTVVDYMEPRVAESQEPSNWRE 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DI LRRAALGLR L N    CPT+ V+   CYNPKG GTDAVPGSA Q+           
Sbjct: 361 DIALRRAALGLRHLRNHITSCPTRTVAPRLCYNPKGGGTDAVPGSAIQA----------- 409

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           L  SA VL PSTG WG  RG GRG+G      RGRG G   RELGTEE TVQ A+KRRL 
Sbjct: 410 LETSAWVLPPSTGRWGPCRGCGRGRG------RGRGRGRRPRELGTEETTVQSAAKRRLS 463

Query: 481 MGTRSRAQGHRPQLPLANDLMTN 503
           +GT SRA G +PQL  A++ +T+
Sbjct: 464 VGTGSRAPGRKPQLQFADEALTD 486


>gi|169202387 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 638

 Score =  855 bits (2208), Expect = 0.0
 Identities = 420/503 (83%), Positives = 440/503 (87%), Gaps = 17/503 (3%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAH+AGLAKVIPPKEWKARQMY
Sbjct: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHRAGLAKVIPPKEWKARQMY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYR LANSKKYQTPPHQNFADLEQ
Sbjct: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRHLANSKKYQTPPHQNFADLEQ 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG
Sbjct: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQ LE LARELFP  SRGCE FLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLK+NGIPFN MTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 241 HKVALISPTVLKKNGIPFNRMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GK+ASQCSCGE+ VTFSMD FVRI+QPESYELWKHRQDL +V++ EPRVAESQE SNWR+
Sbjct: 301 GKVASQCSCGEARVTFSMDAFVRILQPESYELWKHRQDLTVVDYMEPRVAESQEPSNWRE 360

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLT 420
           DI LRRAALGLR L N    CPT+ V+   CYNPKG GTDAVPGSA Q+           
Sbjct: 361 DIALRRAALGLRHLRNHITSCPTRTVAPRLCYNPKGGGTDAVPGSAIQA----------- 409

Query: 421 LGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLL 480
           L  SA VL PSTG WG  RG GRG+G      RGRG G   RELGTEE TVQ A+KRRL 
Sbjct: 410 LETSAWVLPPSTGRWGPCRGCGRGRG------RGRGRGRRPRELGTEETTVQSAAKRRLS 463

Query: 481 MGTRSRAQGHRPQLPLANDLMTN 503
           +GT SRA G +PQL  A++ +T+
Sbjct: 464 VGTGSRAPGRKPQLQFADEALTD 486


>gi|39653317 jumonji domain containing 2D [Homo sapiens]
          Length = 523

 Score =  668 bits (1724), Expect = 0.0
 Identities = 346/512 (67%), Positives = 390/512 (76%), Gaps = 34/512 (6%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           MKS  +  QN +  IM F+PT EEF DF+ Y+AYMESQGAH+AGLAK+IPPKEWKAR+ Y
Sbjct: 4   MKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETY 63

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           D+I +ILIATPLQQV SG+ GVFTQYHKKKKAM VG+YR LANSKKYQTPPHQNF DLE+
Sbjct: 64  DNISEILIATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDLER 123

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           +YWK+   N PIYGADISGSLF+E+TKQWNLGHLGTI DLLE+ECGVVIEGVNTPYLYFG
Sbjct: 124 KYWKNRIYNSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFG 183

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLH GEPKTWYVVPPEHGQ LERLARELFP  SRGC AFLR
Sbjct: 184 MWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLR 243

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HKVALISPTVLKENGIPFN +TQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY
Sbjct: 244 HKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 303

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GKMASQCSCGE+ VTFSMD FVRI+QPE Y+LWK  QD A+V+H EPRV  SQELS  ++
Sbjct: 304 GKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVDHMEPRVPASQELSTQKE 363

Query: 361 DIVLRRAALGLRLLPNLTAQCPTQPVS--SGHCYNPKGCGT----DAVPGSAFQ------ 408
             + RRAALGLR LP+  A+    P++  SG   +   C +     AV G+A Q      
Sbjct: 364 VQLPRRAALGLRQLPSHWARHSPWPMAARSGTRCHTLVCSSLPRRSAVSGTATQPRAAAV 423

Query: 409 -SSAYHTQTQSLTLGMSARVLLPSTGSWGSGRGRGRGQGQGRGCSRGRGHGCCTRELGTE 467
            SS   + T S T G SA+++ PS G     RGRGR                  ++L  +
Sbjct: 424 HSSKKPSSTPSSTPGPSAQIIHPSNGR----RGRGRP----------------PQKLRAQ 463

Query: 468 EPTVQPASKRRLLMGTRSRAQGHRPQLPLAND 499
           E T+Q  +KR LL GT   A G  P+ PL  D
Sbjct: 464 ELTLQTPAKRPLLAGTTCTASGPEPE-PLPED 494


>gi|45504380 jumonji domain containing 2B [Homo sapiens]
          Length = 1096

 Score =  544 bits (1402), Expect = e-155
 Identities = 253/374 (67%), Positives = 302/374 (80%), Gaps = 4/374 (1%)

Query: 1   MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY 60
           M S     QN S  IMTF PTMEEF DFN YVAY+ESQGAH+AGLAK+IPPKEWK RQ Y
Sbjct: 1   MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY 60

Query: 61  DDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQ 120
           DDI+D++I  P+QQV +GQ G+FTQY+ +KKAM VG+YRRLANS+KY TP HQ+F DLE+
Sbjct: 61  DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER 120

Query: 121 RYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFG 180
           +YWK+     PIYGADISGSL+++   QWN+G L TILD++E+ECG +IEGVNTPYLYFG
Sbjct: 121 KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG 180

Query: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLR 240
           MWKTTFAWHTEDMDLYSINYLHFGEPK+WY +PPEHG+ LERLA   FP  S+GC+AFLR
Sbjct: 181 MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR 240

Query: 241 HKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDY 300
           HK+ LISP +LK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWIDY
Sbjct: 241 HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY 300

Query: 301 GKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNWRD 360
           GK+A+QC+C +  V  SMD FVRI+QPE YELWK  +DL +++HT P    S ELS+W  
Sbjct: 301 GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWS- 359

Query: 361 DIVLRRAALGLRLL 374
                RA+L  +LL
Sbjct: 360 ---ASRASLKAKLL 370


>gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens]
          Length = 813

 Score =  509 bits (1311), Expect = e-144
 Identities = 228/352 (64%), Positives = 287/352 (81%)

Query: 7   SPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDI 66
           SP N S  IMTF P+MEEF +FN Y+AYMES+GAH+AGLAKVIPPKEWK RQ YDDI+++
Sbjct: 8   SPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNL 67

Query: 67  LIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSH 126
           LI  P+QQ+ +GQ G+FTQY+ +KKAM V ++R+LANS KY TP + ++ DLE++YWK+ 
Sbjct: 68  LIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNL 127

Query: 127 PGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTF 186
               PIYGADI+GS+++E   +WN+  L T+LD++E+ECG+ IEGVNTPYLYFGMWKTTF
Sbjct: 128 TFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTF 187

Query: 187 AWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALI 246
           AWHTEDMDLYSINYLHFGEPK+WY +PPEHG+ LERLA+  FP  S+GC+AFLRHK+ LI
Sbjct: 188 AWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLI 247

Query: 247 SPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQ 306
           SP+VLK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWIDYGK+A  
Sbjct: 248 SPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307

Query: 307 CSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNW 358
           C+C +  V  SMD FVR  QP+ Y+LWK  +D+  ++HT+P  A + E+  W
Sbjct: 308 CTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPASTPEVKAW 359


>gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens]
          Length = 835

 Score =  509 bits (1311), Expect = e-144
 Identities = 228/352 (64%), Positives = 287/352 (81%)

Query: 7   SPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDI 66
           SP N S  IMTF P+MEEF +FN Y+AYMES+GAH+AGLAKVIPPKEWK RQ YDDI+++
Sbjct: 30  SPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNL 89

Query: 67  LIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSH 126
           LI  P+QQ+ +GQ G+FTQY+ +KKAM V ++R+LANS KY TP + ++ DLE++YWK+ 
Sbjct: 90  LIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNL 149

Query: 127 PGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTF 186
               PIYGADI+GS+++E   +WN+  L T+LD++E+ECG+ IEGVNTPYLYFGMWKTTF
Sbjct: 150 TFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTF 209

Query: 187 AWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALI 246
           AWHTEDMDLYSINYLHFGEPK+WY +PPEHG+ LERLA+  FP  S+GC+AFLRHK+ LI
Sbjct: 210 AWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLI 269

Query: 247 SPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQ 306
           SP+VLK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWIDYGK+A  
Sbjct: 270 SPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 329

Query: 307 CSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNW 358
           C+C +  V  SMD FVR  QP+ Y+LWK  +D+  ++HT+P  A + E+  W
Sbjct: 330 CTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPASTPEVKAW 381


>gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]
          Length = 1047

 Score =  509 bits (1311), Expect = e-144
 Identities = 228/352 (64%), Positives = 287/352 (81%)

Query: 7   SPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDI 66
           SP N S  IMTF P+MEEF +FN Y+AYMES+GAH+AGLAKVIPPKEWK RQ YDDI+++
Sbjct: 8   SPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNL 67

Query: 67  LIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSH 126
           LI  P+QQ+ +GQ G+FTQY+ +KKAM V ++R+LANS KY TP + ++ DLE++YWK+ 
Sbjct: 68  LIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNL 127

Query: 127 PGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTF 186
               PIYGADI+GS+++E   +WN+  L T+LD++E+ECG+ IEGVNTPYLYFGMWKTTF
Sbjct: 128 TFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTF 187

Query: 187 AWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALI 246
           AWHTEDMDLYSINYLHFGEPK+WY +PPEHG+ LERLA+  FP  S+GC+AFLRHK+ LI
Sbjct: 188 AWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLI 247

Query: 247 SPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQ 306
           SP+VLK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWIDYGK+A  
Sbjct: 248 SPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307

Query: 307 CSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNW 358
           C+C +  V  SMD FVR  QP+ Y+LWK  +D+  ++HT+P  A + E+  W
Sbjct: 308 CTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPASTPEVKAW 359


>gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]
          Length = 1056

 Score =  509 bits (1311), Expect = e-144
 Identities = 228/352 (64%), Positives = 287/352 (81%)

Query: 7   SPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDI 66
           SP N S  IMTF P+MEEF +FN Y+AYMES+GAH+AGLAKVIPPKEWK RQ YDDI+++
Sbjct: 8   SPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNL 67

Query: 67  LIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSH 126
           LI  P+QQ+ +GQ G+FTQY+ +KKAM V ++R+LANS KY TP + ++ DLE++YWK+ 
Sbjct: 68  LIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNL 127

Query: 127 PGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTF 186
               PIYGADI+GS+++E   +WN+  L T+LD++E+ECG+ IEGVNTPYLYFGMWKTTF
Sbjct: 128 TFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTF 187

Query: 187 AWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALI 246
           AWHTEDMDLYSINYLHFGEPK+WY +PPEHG+ LERLA+  FP  S+GC+AFLRHK+ LI
Sbjct: 188 AWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLI 247

Query: 247 SPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQ 306
           SP+VLK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWIDYGK+A  
Sbjct: 248 SPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307

Query: 307 CSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQELSNW 358
           C+C +  V  SMD FVR  QP+ Y+LWK  +D+  ++HT+P  A + E+  W
Sbjct: 308 CTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPASTPEVKAW 359


>gi|98986459 jumonji domain containing 2A [Homo sapiens]
          Length = 1064

 Score =  498 bits (1282), Expect = e-141
 Identities = 224/342 (65%), Positives = 278/342 (81%)

Query: 6   SSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIED 65
           S   N S  IMTFYPTMEEF +F+ Y+AY+ESQGAH+AGLAKV+PPKEWK R  YDDI+D
Sbjct: 5   SETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDD 64

Query: 66  ILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKS 125
           ++I  P+QQ+ +GQ G+FTQY+ +KKAM V ++R++ANS KY TP +  F +LE++YWK+
Sbjct: 65  LVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKN 124

Query: 126 HPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTT 185
              NPPIYGAD++G+L+E+   +WN+G L TILDL+E+E G+ IEGVNTPYLYFGMWKT+
Sbjct: 125 LTFNPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTS 184

Query: 186 FAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVAL 245
           FAWHTEDMDLYSINYLHFGEPK+WY VPPEHG+ LERLA+  FP  ++ CEAFLRHK+ L
Sbjct: 185 FAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTL 244

Query: 246 ISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMAS 305
           ISP +LK+ GIPF+ +TQEAGEFM+TFPYGYHAGFNHGFNCAE+ NFAT RWI+YGK A 
Sbjct: 245 ISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304

Query: 306 QCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEP 347
            CSC +  V  SMD FVR  QPE Y+LWK  +D  +++HT P
Sbjct: 305 LCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTLP 346


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 1690

 Score =  151 bits (382), Expect = 1e-36
 Identities = 78/188 (41%), Positives = 103/188 (54%), Gaps = 18/188 (9%)

Query: 133 YGADISGSLF------------------EESTKQWNLGHLGTILDLLEQECGVVIEGVNT 174
           YGADIS   F                  E +   WNL ++  +   +     V I G+  
Sbjct: 409 YGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKV 468

Query: 175 PYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRG 234
           P+LY GM  ++F WH ED   YSINYLH+GEPKTWY VP    + LE + REL P++   
Sbjct: 469 PWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFES 528

Query: 235 CEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFAT 294
               L   V +++P VL E+G+P     Q AGEF+VTFP  YH+GFN G+N AEA+NF T
Sbjct: 529 QPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCT 588

Query: 295 PRWIDYGK 302
             W+  G+
Sbjct: 589 ADWLPIGR 596



 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
          F P+ EEF D  +++  +    A + G+ K+ PPK+W+
Sbjct: 22 FEPSWEEFTDPLSFIGRIRPL-AEKTGICKIRPPKDWQ 58


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
           sapiens]
          Length = 1641

 Score =  151 bits (382), Expect = 1e-36
 Identities = 78/188 (41%), Positives = 103/188 (54%), Gaps = 18/188 (9%)

Query: 133 YGADISGSLF------------------EESTKQWNLGHLGTILDLLEQECGVVIEGVNT 174
           YGADIS   F                  E +   WNL ++  +   +     V I G+  
Sbjct: 409 YGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKV 468

Query: 175 PYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRG 234
           P+LY GM  ++F WH ED   YSINYLH+GEPKTWY VP    + LE + REL P++   
Sbjct: 469 PWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFES 528

Query: 235 CEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFAT 294
               L   V +++P VL E+G+P     Q AGEF+VTFP  YH+GFN G+N AEA+NF T
Sbjct: 529 QPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCT 588

Query: 295 PRWIDYGK 302
             W+  G+
Sbjct: 589 ADWLPIGR 596



 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
          F P+ EEF D  +++  +    A + G+ K+ PPK+W+
Sbjct: 22 FEPSWEEFTDPLSFIGRIRPL-AEKTGICKIRPPKDWQ 58


>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
           sapiens]
          Length = 1570

 Score =  143 bits (361), Expect = 3e-34
 Identities = 94/296 (31%), Positives = 137/296 (46%), Gaps = 32/296 (10%)

Query: 75  VTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQN-----FADLEQRYWKSH--- 126
           V+S +  V  +Y     +   G    ++NSK+  +P  +         L   +W      
Sbjct: 419 VSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKRQSLTVLTRLISSFWAQAVLP 478

Query: 127 PGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTF 186
           P  P + G      L E +T  WNL  +  +   +       I G+  P+LY GM  + F
Sbjct: 479 PWPPKVLG------LQEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAF 532

Query: 187 AWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALI 246
            WH ED   YSINYLH+GEPKTWY VP    +HLE + + L P++       L   V L+
Sbjct: 533 CWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLM 592

Query: 247 SPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWI-------- 298
           +P  L  +G+P     Q AGEF++TFP  YH+GFN G+N AEA+NF T  W+        
Sbjct: 593 NPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIE 652

Query: 299 DYGKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAESQE 354
            Y ++   C      +   M  F     PE+ +L     +LA+  H E  +   +E
Sbjct: 653 HYRRLRRYCVFSHEELICKMAAF-----PETLDL-----NLAVAVHKEMFIMVQEE 698


>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
           sapiens]
          Length = 1379

 Score =  142 bits (358), Expect = 7e-34
 Identities = 68/160 (42%), Positives = 93/160 (58%)

Query: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
           E +T  WNL  +  +   +       I G+  P+LY GM  + F WH ED   YSINYLH
Sbjct: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460

Query: 203 FGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMT 262
           +GEPKTWY VP    +HLE + ++L P++       L   V L++P  L  +G+P     
Sbjct: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520

Query: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
           Q AGEF++TFP  YH+GFN G+N AEA+NF T  W+  G+
Sbjct: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560


>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
           sapiens]
          Length = 1560

 Score =  142 bits (358), Expect = 7e-34
 Identities = 68/160 (42%), Positives = 93/160 (58%)

Query: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
           E +T  WNL  +  +   +       I G+  P+LY GM  + F WH ED   YSINYLH
Sbjct: 468 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 527

Query: 203 FGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMT 262
           +GEPKTWY VP    +HLE + ++L P++       L   V L++P  L  +G+P     
Sbjct: 528 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 587

Query: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
           Q AGEF++TFP  YH+GFN G+N AEA+NF T  W+  G+
Sbjct: 588 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 627


>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
           sapiens]
          Length = 1482

 Score =  141 bits (356), Expect = 1e-33
 Identities = 95/303 (31%), Positives = 137/303 (45%), Gaps = 41/303 (13%)

Query: 83  FTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADL-EQRYWK---SHPGNPPI-YGADI 137
           F Q  ++      G+      S  +  P H    +L E+ +W+   S   +  + YGADI
Sbjct: 318 FEQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADI 377

Query: 138 SGSLF------------------EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYF 179
               F                  E +T  WNL  +  +   +       I G+  P+LY 
Sbjct: 378 HSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYV 437

Query: 180 GMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFL 239
           GM  + F WH ED   YSINYLH+GEPKTWY VP    +HLE + + L P++       L
Sbjct: 438 GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLL 497

Query: 240 RHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWI- 298
              V L++P  L  +G+P     Q AGEF++TFP  YH+GFN G+N AEA+NF T  W+ 
Sbjct: 498 HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP 557

Query: 299 -------DYGKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAE 351
                   Y ++   C      +   M  F     PE+ +L     +LA+  H E  +  
Sbjct: 558 AGRQCIEHYRRLRRYCVFSHEELICKMAAF-----PETLDL-----NLAVAVHKEMFIMV 607

Query: 352 SQE 354
            +E
Sbjct: 608 QEE 610


>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
           sapiens]
          Length = 1539

 Score =  141 bits (356), Expect = 1e-33
 Identities = 95/303 (31%), Positives = 137/303 (45%), Gaps = 41/303 (13%)

Query: 83  FTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADL-EQRYWK---SHPGNPPI-YGADI 137
           F Q  ++      G+      S  +  P H    +L E+ +W+   S   +  + YGADI
Sbjct: 375 FEQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADI 434

Query: 138 SGSLF------------------EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYF 179
               F                  E +T  WNL  +  +   +       I G+  P+LY 
Sbjct: 435 HSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYV 494

Query: 180 GMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFL 239
           GM  + F WH ED   YSINYLH+GEPKTWY VP    +HLE + + L P++       L
Sbjct: 495 GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLL 554

Query: 240 RHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWI- 298
              V L++P  L  +G+P     Q AGEF++TFP  YH+GFN G+N AEA+NF T  W+ 
Sbjct: 555 HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP 614

Query: 299 -------DYGKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQDLAIVEHTEPRVAE 351
                   Y ++   C      +   M  F     PE+ +L     +LA+  H E  +  
Sbjct: 615 AGRQCIEHYRRLRRYCVFSHEELICKMAAF-----PETLDL-----NLAVAVHKEMFIMV 664

Query: 352 SQE 354
            +E
Sbjct: 665 QEE 667


>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
          Length = 1544

 Score =  133 bits (335), Expect = 3e-31
 Identities = 64/154 (41%), Positives = 90/154 (58%)

Query: 149 WNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKT 208
           WNL ++  +   +       I G+  P+LY GM  ++F WH ED   YSINYLH+GEPKT
Sbjct: 459 WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT 518

Query: 209 WYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEF 268
           WY VP    + LE + ++L P++       L   V +++P  L  + +P     Q AGEF
Sbjct: 519 WYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEF 578

Query: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
           ++TFP  YH+GFN GFN AEA+NF T  W+  G+
Sbjct: 579 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGR 612



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
          F P+ EEFAD   ++  +    A Q G+ KV PP +W+
Sbjct: 35 FEPSWEEFADPFAFIHKIRPI-AEQTGICKVRPPPDWQ 71


>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
           domain 1B (RBP2-like), partial [Homo sapiens]
          Length = 977

 Score =  133 bits (335), Expect = 3e-31
 Identities = 64/154 (41%), Positives = 90/154 (58%)

Query: 149 WNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKT 208
           WNL ++  +   +       I G+  P+LY GM  ++F WH ED   YSINYLH+GEPKT
Sbjct: 459 WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT 518

Query: 209 WYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEF 268
           WY VP    + LE + ++L P++       L   V +++P  L  + +P     Q AGEF
Sbjct: 519 WYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEF 578

Query: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
           ++TFP  YH+GFN GFN AEA+NF T  W+  G+
Sbjct: 579 VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGR 612



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
          F P+ EEFAD   ++  +    A Q G+ KV PP +W+
Sbjct: 35 FEPSWEEFADPFAFIHKIRPI-AEQTGICKVRPPPDWQ 71


>gi|11863152 jumonji, AT rich interactive domain 2 protein [Homo
            sapiens]
          Length = 1246

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 25/270 (9%)

Query: 81   GVFTQYHK---KKKAMRVGQYRRLAN---SKKYQTPPHQNFADLEQRYWKS--------- 125
            GV   +HK   K +++ +  + R A    S  +   P    A++EQ YW+          
Sbjct: 805  GVLNDFHKCIYKGRSVSLTTFYRTARNIMSMCFSKEPAP--AEIEQEYWRLVEEKDCHVA 862

Query: 126  -HPG--NPPIYGADISGSLFEESTKQ-WNLGHLGTILDLLEQECGVVIEGVNTPYLYFGM 181
             H G  +   +G+       E  ++  WNL  L      + +  G V  GV  P+L  GM
Sbjct: 863  VHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAV-PGVTIPWLNIGM 921

Query: 182  WKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRH 241
              +T  W  +   L  I+YLH G    WY +P E    LE +   L           L  
Sbjct: 922  VFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLES 981

Query: 242  KVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
             V +ISP VL + GI  +   Q++G+F+V FP  + +    G++ +E ++FAT +W   G
Sbjct: 982  NV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMG 1040

Query: 302  -KMASQCSCGESTVTFSMDPFV-RIVQPES 329
             + A +         FSM+  + +I Q E+
Sbjct: 1041 FETAKEMKRRHIAKPFSMEKLLYQIAQAEA 1070



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 20  PTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDILIATPLQQV 75
           P+ +EF D   Y+  + +Q   + G+ +VIPP +W+     +D  ++   T +Q +
Sbjct: 562 PSAKEFHDPLIYIESVRAQ-VEKFGMCRVIPPPDWRPECKLND--EMRFVTQIQHI 614


>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
           isoform [Homo sapiens]
          Length = 302

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 17/24 (70%), Positives = 19/24 (79%)

Query: 433 GSWGSGRGRGRGQGQGRGCSRGRG 456
           G  G GRGRGRG+G+GRG  RGRG
Sbjct: 72  GVCGRGRGRGRGRGRGRGRGRGRG 95



 Score = 38.9 bits (89), Expect = 0.011
 Identities = 16/21 (76%), Positives = 18/21 (85%)

Query: 438 GRGRGRGQGQGRGCSRGRGHG 458
           GRGRGRG+G+GRG  RGRG G
Sbjct: 75  GRGRGRGRGRGRGRGRGRGRG 95



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 381 CPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLTLGMSARVLLPSTGSW----- 435
           CP Q           G G D+      Q SA      S      AR      G W     
Sbjct: 11  CPEQEEGESAA-GGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAGR 69

Query: 436 -GSGRGRGRGQGQGRGCSRGRGHG 458
            G   GRGRG+G+GRG  RGRG G
Sbjct: 70  GGGVCGRGRGRGRGRGRGRGRGRG 93



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 436 GSGRGRGRGQGQGRGCSRGR 455
           G GRGRGRG+G+GRG  RGR
Sbjct: 77  GRGRGRGRGRGRGRGRGRGR 96



 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/23 (65%), Positives = 17/23 (73%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G GRGRGRG+G+GR  S G G G
Sbjct: 83  GRGRGRGRGRGRGRPPSGGSGLG 105



 Score = 32.3 bits (72), Expect = 1.0
 Identities = 14/23 (60%), Positives = 16/23 (69%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G GRGRGRG+G+GRG     G G
Sbjct: 81  GRGRGRGRGRGRGRGRPPSGGSG 103



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 389 GHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLTLGMSARVLLPSTGSWGSGRG-RGRGQGQ 447
           G C   +  G  A  GS     +      ++  G     L PS  S     G RG G+G+
Sbjct: 8   GRCCPEQEEGESAAGGSGAGGDS------AIEQGGQGSALAPSPVSGVRREGARGGGRGR 61

Query: 448 GRGCSRGRGHGCCTRELG 465
           GR    GRG G C R  G
Sbjct: 62  GRWKQAGRGGGVCGRGRG 79


>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
           sapiens]
          Length = 411

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 17/24 (70%), Positives = 19/24 (79%)

Query: 433 GSWGSGRGRGRGQGQGRGCSRGRG 456
           G  G GRGRGRG+G+GRG  RGRG
Sbjct: 72  GVCGRGRGRGRGRGRGRGRGRGRG 95



 Score = 38.9 bits (89), Expect = 0.011
 Identities = 16/21 (76%), Positives = 18/21 (85%)

Query: 438 GRGRGRGQGQGRGCSRGRGHG 458
           GRGRGRG+G+GRG  RGRG G
Sbjct: 75  GRGRGRGRGRGRGRGRGRGRG 95



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 381 CPTQPVSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLTLGMSARVLLPSTGSW----- 435
           CP Q           G G D+      Q SA      S      AR      G W     
Sbjct: 11  CPEQEEGESAA-GGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAGR 69

Query: 436 -GSGRGRGRGQGQGRGCSRGRGHG 458
            G   GRGRG+G+GRG  RGRG G
Sbjct: 70  GGGVCGRGRGRGRGRGRGRGRGRG 93



 Score = 36.2 bits (82), Expect = 0.072
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 436 GSGRGRGRGQGQGRGCSRGR 455
           G GRGRGRG+G+GRG  RGR
Sbjct: 77  GRGRGRGRGRGRGRGRGRGR 96



 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/23 (65%), Positives = 17/23 (73%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G GRGRGRG+G+GR  S G G G
Sbjct: 83  GRGRGRGRGRGRGRPPSGGSGLG 105



 Score = 32.3 bits (72), Expect = 1.0
 Identities = 14/23 (60%), Positives = 16/23 (69%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G GRGRGRG+G+GRG     G G
Sbjct: 81  GRGRGRGRGRGRGRGRPPSGGSG 103



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 389 GHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLTLGMSARVLLPSTGSWGSGRG-RGRGQGQ 447
           G C   +  G  A  GS     +      ++  G     L PS  S     G RG G+G+
Sbjct: 8   GRCCPEQEEGESAAGGSGAGGDS------AIEQGGQGSALAPSPVSGVRREGARGGGRGR 61

Query: 448 GRGCSRGRGHGCCTRELG 465
           GR    GRG G C R  G
Sbjct: 62  GRWKQAGRGGGVCGRGRG 79


>gi|169160654 PREDICTED: similar to small nuclear ribonucleoprotein
           D1 polypeptide 16kDa [Homo sapiens]
          Length = 119

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 15/20 (75%), Positives = 18/20 (90%)

Query: 437 SGRGRGRGQGQGRGCSRGRG 456
           +GRGRGRG+G+GRG  RGRG
Sbjct: 96  AGRGRGRGRGRGRGRGRGRG 115



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 14/19 (73%), Positives = 16/19 (84%)

Query: 440 GRGRGQGQGRGCSRGRGHG 458
           GRGRG+G+GRG  RGRG G
Sbjct: 97  GRGRGRGRGRGRGRGRGRG 115



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/18 (72%), Positives = 15/18 (83%)

Query: 436 GSGRGRGRGQGQGRGCSR 453
           G GRGRGRG+G+GRG  R
Sbjct: 101 GRGRGRGRGRGRGRGGPR 118


>gi|5902102 small nuclear ribonucleoprotein D1 polypeptide 16kDa
           [Homo sapiens]
          Length = 119

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 15/20 (75%), Positives = 18/20 (90%)

Query: 437 SGRGRGRGQGQGRGCSRGRG 456
           +GRGRGRG+G+GRG  RGRG
Sbjct: 96  AGRGRGRGRGRGRGRGRGRG 115



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 14/19 (73%), Positives = 16/19 (84%)

Query: 440 GRGRGQGQGRGCSRGRGHG 458
           GRGRG+G+GRG  RGRG G
Sbjct: 97  GRGRGRGRGRGRGRGRGRG 115



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/18 (72%), Positives = 15/18 (83%)

Query: 436 GSGRGRGRGQGQGRGCSR 453
           G GRGRGRG+G+GRG  R
Sbjct: 101 GRGRGRGRGRGRGRGGPR 118


>gi|110681708 zinc finger protein 579 [Homo sapiens]
          Length = 562

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 439 RGRGRGQGQGRGCSRGRGHG 458
           RGRGRG+G+GRG  RGRG G
Sbjct: 16  RGRGRGRGRGRGRGRGRGRG 35



 Score = 36.6 bits (83), Expect = 0.055
 Identities = 15/19 (78%), Positives = 17/19 (89%)

Query: 438 GRGRGRGQGQGRGCSRGRG 456
           GRGRGRG+G+GRG  RGRG
Sbjct: 17  GRGRGRGRGRGRGRGRGRG 35



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 430 PSTGSWGSGRGRGRGQGQGRGCSRGRGHG 458
           P   + GS   RGRG+G+GRG  RGRG G
Sbjct: 5   PPPPAQGSPPHRGRGRGRGRGRGRGRGRG 33


>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
          Length = 397

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 14/27 (51%), Positives = 21/27 (77%)

Query: 432 TGSWGSGRGRGRGQGQGRGCSRGRGHG 458
           T + G G+G+G+GQGQG+G  +G+G G
Sbjct: 175 TQAEGQGQGQGQGQGQGQGQGQGQGQG 201



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 13/23 (56%), Positives = 19/23 (82%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G G+G+G+GQGQG+G  +G+G G
Sbjct: 181 GQGQGQGQGQGQGQGQGQGQGQG 203



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 13/23 (56%), Positives = 19/23 (82%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G G+G+G+GQGQG+G  +G+G G
Sbjct: 183 GQGQGQGQGQGQGQGQGQGQGQG 205



 Score = 32.7 bits (73), Expect = 0.80
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 436 GSGRGRGRGQGQGRGCSRGRGHG 458
           G G+G+G+GQGQG+G  +GR  G
Sbjct: 187 GQGQGQGQGQGQGQGQGQGRRPG 209


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 12/115 (10%)

Query: 386  VSSGHCYNPKGCGTDAVPGSAFQSSAYHTQTQSLTLGMSARVLLPST-------GSWG-- 436
            V  GHC      G    PGS  Q +  +   Q+  L  +A+   P T        +W   
Sbjct: 4112 VPIGHCDCTDAQGHSWAPGSQHQDACNNCSCQAGQLSCTAQPCPPPTHCAWSHWSAWSPC 4171

Query: 437  --SGRGRGRGQGQGRGCSRGRGHGCCTRELGTEEPTVQPASKRRLLMGTRSRAQG 489
              S   RG+ Q + R  + G     C  E    +P  QP+     L GTRSR  G
Sbjct: 4172 SHSCGPRGQ-QSRFRSSTSGSWAPECREEQSQSQPCPQPSCPPLCLQGTRSRTLG 4225


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,207,836
Number of Sequences: 37866
Number of extensions: 1081261
Number of successful extensions: 4571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3960
Number of HSP's gapped (non-prelim): 444
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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