KDM4B 29796

Name: KDM4B	Sequence: fasta or formatted (1096aa)		NCBI GI: 45504380
Description: jumonji domain containing 2B		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 91 4 C cysteine 3.0 33 2 D aspartate 4.1 45 3 E glutamate 8.4 92 6 F phenylalanine 3.6 40 2 G glycine 7.1 78 2 H histidine 2.4 26 1 I isoleucine 4.5 49 2 K lysine 6.0 66 3 L leucine 7.5 82 2 M methionine 1.8 20 1 N asparagine 2.3 25 1 P proline 8.5 93 4 Q glutamine 3.9 43 2 R arginine 5.9 65 2 S serine 7.4 81 2 T threonine 5.2 57 2 V valine 5.1 56 2 W tryptophan 1.6 18 1 Y tyrosine 3.3 36 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 2B KDM4C 0.495 jumonji domain containing 2C isoform 1 KDM4C 0.492 jumonji domain containing 2C isoform 2 KDM4C 0.377 jumonji domain containing 2C isoform 3 KDM4C 0.377 jumonji domain containing 2C isoform 4 KDM4A 0.260 jumonji domain containing 2A KDM4D 0.242 jumonji domain containing 2D LOC100129053 0.233 PREDICTED: hypothetical protein LOC100129053 0.233 PREDICTED: hypothetical protein LOC100129053 0.233 PREDICTED: hypothetical protein LOC390245 0.231 PREDICTED: hypothetical protein LOC390245 0.231 PREDICTED: hypothetical protein LOC390245 0.231 PREDICTED: hypothetical protein KDM5A 0.051 retinoblastoma binding protein 2 isoform 1 KDM5A 0.051 retinoblastoma binding protein 2 isoform 2 KDM5D 0.048 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.048 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5C 0.048 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.048 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5B 0.048 jumonji, AT rich interactive domain 1B LOC100133760 0.048 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5D 0.047 jumonji, AT rich interactive domain 1D isoform 1 [H... BRPF1 0.045 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.045 bromodomain and PHD finger-containing protein 1 isof... BRD1 0.043 bromodomain containing protein 1 BRPF3 0.040 bromodomain and PHD finger containing, 3 PHF15 0.037 PHD finger protein 15 MLLT6 0.037 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT10 0.036 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.036 myeloid/lymphoid or mixed-lineage leukemia translocat... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.