Guide to the Human Genome
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Name: CDC25B Sequence: fasta or formatted (539aa) NCBI GI: 11641411
Description:

cell division cycle 25B isoform 3

Referenced in:

Additional Cell Cycle Functions
Cyclins and Related Functions

Other entries for this name:
alt prot [580aa] cell division cycle 25B isoform 1
alt prot [566aa] cell division cycle 25B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         35           3
 C cysteine            2.2         12           1
 D aspartate           6.1         33           3
 E glutamate           8.7         47           3
 F phenylalanine       4.1         22           2
 G glycine             5.0         27           2
 H histidine           2.6         14           1
 I isoleucine          3.5         19           2
 K lysine              4.8         26           1
 L leucine            10.2         55           3
 M methionine          3.0         16           1
 N asparagine          1.5          8           1
 P proline             8.3         45           2
 Q glutamine           3.9         21           2
 R arginine            8.2         44           3
 S serine             10.4         56           2
 T threonine           3.9         21           2
 V valine              4.3         23           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 25B isoform 3 
CDC25B                0.981   cell division cycle 25B isoform 1 
CDC25B                0.947   cell division cycle 25B isoform 2 
CDC25A                0.341   cell division cycle 25A isoform a 
CDC25A                0.327   cell division cycle 25A isoform b 
CDC25C                0.225   cell division cycle 25C isoform a 
CDC25C                0.223   cell division cycle 25C isoform b 
SMARCA2               0.010   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.010   SWI/SNF-related matrix-associated actin-dependent re...
DUSP5                 0.009   dual specificity phosphatase 5 
SH3PXD2B              0.008   SH3 and PX domains 2B 
SPEN                  0.008   spen homolog, transcriptional regulator 
BSN                   0.008   bassoon protein 
ARID1A                0.008   AT rich interactive domain 1A isoform a 
ARID1A                0.008   AT rich interactive domain 1A isoform b 
MORC2                 0.008   MORC family CW-type zinc finger 2 
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent re...
DBP                   0.007   D site of albumin promoter (albumin D-box) binding p...
ZNF438                0.007   zinc finger protein 438 isoform b 
ZNF438                0.007   zinc finger protein 438 isoform b 
ZNF438                0.007   zinc finger protein 438 isoform c 
ZNF438                0.007   zinc finger protein 438 isoform a 
ZNF438                0.007   zinc finger protein 438 isoform a 
ZNF438                0.007   zinc finger protein 438 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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