Search of human proteins with 239735605

Search of human proteins with 239735605

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo
sapiens]
         (754 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo s...  1492   0.0  
gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo s...  1240   0.0  
gi|62899065 centrosomal protein 72 kDa [Homo sapiens]                 137   4e-32
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  62   3e-09
gi|21389483 leucine-rich repeats and guanylate kinase domain con...    60   7e-09
gi|31621309 leucine rich repeat containing 6 [Homo sapiens]            58   3e-08
gi|239754500 PREDICTED: Leucine-rich repeat-containing protein E...    54   7e-07
gi|239749060 PREDICTED: Leucine-rich repeat-containing protein E...    54   7e-07
gi|239743086 PREDICTED: Leucine-rich repeat-containing protein E...    54   7e-07
gi|239508737 PREDICTED: Leucine-rich repeat-containing protein E...    54   7e-07
gi|206725447 leucine rich repeat containing 23 isoform a [Homo s...    51   5e-06
gi|42542396 leucine rich repeat containing 23 isoform a [Homo sa...    51   5e-06
gi|4826651 hypothetical protein LOC755 [Homo sapiens]                  49   2e-05
gi|157674358 leucine rich repeat containing 50 [Homo sapiens]          49   2e-05
gi|55743114 leucine rich repeat containing 49 [Homo sapiens]           46   1e-04
gi|239752518 PREDICTED: similar to leucine rich repeat containin...    45   2e-04
gi|21687175 leucine rich transmembrane and 0-methyltransferase d...    45   3e-04
gi|115495445 ankyrin repeat domain 30A [Homo sapiens]                  44   4e-04
gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo...    44   4e-04
gi|38348406 leucine rich repeat containing 33 [Homo sapiens]           44   6e-04
gi|194272228 leucine rich repeat containing 48 isoform b [Homo s...    42   0.003
gi|194272226 leucine rich repeat containing 48 isoform b [Homo s...    42   0.003
gi|194272224 leucine rich repeat containing 48 isoform a [Homo s...    42   0.003
gi|194272222 leucine rich repeat containing 48 isoform a [Homo s...    42   0.003
gi|10190682 chromobox homolog 8 [Homo sapiens]                         41   0.005
gi|31377705 centrosomal protein 97kDa [Homo sapiens]                   40   0.008
gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo sap...    39   0.018
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro...    38   0.030
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro...    38   0.030
gi|87299628 biorientation of chromosomes in cell division 1-like...    38   0.030

>gi|239735605 leucine rich repeat containing 36 isoform 1 [Homo
           sapiens]
          Length = 754

 Score = 1492 bits (3863), Expect = 0.0
 Identities = 754/754 (100%), Positives = 754/754 (100%)

Query: 1   MAEQWELDEEGIRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRN 60
           MAEQWELDEEGIRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRN
Sbjct: 1   MAEQWELDEEGIRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRN 60

Query: 61  LITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFA 120
           LITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFA
Sbjct: 61  LITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFA 120

Query: 121 VYTLQTLEKLDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSAS 180
           VYTLQTLEKLDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSAS
Sbjct: 121 VYTLQTLEKLDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSAS 180

Query: 181 KVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVAR 240
           KVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVAR
Sbjct: 181 KVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVAR 240

Query: 241 REMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFH 300
           REMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFH
Sbjct: 241 REMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFH 300

Query: 301 LTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEY 360
           LTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEY
Sbjct: 301 LTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEY 360

Query: 361 SIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQL 420
           SIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQL
Sbjct: 361 SIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQL 420

Query: 421 STSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDN 480
           STSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDN
Sbjct: 421 STSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDN 480

Query: 481 ILANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHW 540
           ILANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHW
Sbjct: 481 ILANLNLKHGFQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHW 540

Query: 541 NGSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPN 600
           NGSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPN
Sbjct: 541 NGSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPN 600

Query: 601 DMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACL 660
           DMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACL
Sbjct: 601 DMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACL 660

Query: 661 NQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSS 720
           NQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSS
Sbjct: 661 NQELAQLKKLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSS 720

Query: 721 PFGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL 754
           PFGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL
Sbjct: 721 PFGKSTLSSSSPVAHETGQYLIQSVLDAAPEPGL 754


>gi|239735598 leucine rich repeat containing 36 isoform 2 [Homo
           sapiens]
          Length = 633

 Score = 1240 bits (3208), Expect = 0.0
 Identities = 624/624 (100%), Positives = 624/624 (100%)

Query: 131 DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI 190
           DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI
Sbjct: 10  DDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTGESSASKVSANVDSRI 69

Query: 191 EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE 250
           EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE
Sbjct: 70  EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE 129

Query: 251 DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC 310
           DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC
Sbjct: 130 DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPDTFHLTHDASLSKC 189

Query: 311 LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT 370
           LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT
Sbjct: 190 LDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNYQEYSIKPSNDIKT 249

Query: 371 TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA 430
           TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA
Sbjct: 250 TASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVEQQLSTSLDDLTPA 309

Query: 431 HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 490
           HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG
Sbjct: 310 HGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 369

Query: 491 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK 550
           FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK
Sbjct: 370 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNK 429

Query: 551 KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV 610
           KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV
Sbjct: 430 KFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFCRRELELKEAAQLVPNDMESLKQKLV 489

Query: 611 RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL 670
           RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL
Sbjct: 490 RVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDDLLHKNQQLTMQVACLNQELAQLKKL 549

Query: 671 EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS 730
           EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS
Sbjct: 550 EKTVAILHESQRSLVVTNEYLLQQLNKEPKGYSGKALLPPEKGHHLGRSSPFGKSTLSSS 609

Query: 731 SPVAHETGQYLIQSVLDAAPEPGL 754
           SPVAHETGQYLIQSVLDAAPEPGL
Sbjct: 610 SPVAHETGQYLIQSVLDAAPEPGL 633


>gi|62899065 centrosomal protein 72 kDa [Homo sapiens]
          Length = 647

 Score =  137 bits (345), Expect = 4e-32
 Identities = 183/698 (26%), Positives = 279/698 (39%), Gaps = 88/698 (12%)

Query: 7   LDEEGIRRLGALTLEQPEL-VESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSL 65
           L EE +R    L   +    ++SLS+ G+Y  KI  +G +  +   L+SLDLSRN + SL
Sbjct: 10  LSEEAVRAKSGLGPHRDLAELQSLSIPGTYQEKITHLGHSLMSLTGLKSLDLSRNSLVSL 69

Query: 66  KGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQ 125
           +GIQYL +L+ LNLYYN I SL EV RL  L  L ++D RLNPVV+ + DYRLF V+ L 
Sbjct: 70  EGIQYLTALESLNLYYNCISSLAEVFRLHALTELVDVDFRLNPVVKVEPDYRLFVVHLLP 129

Query: 126 TLEKLDDRTVREGERKAAKLHFS---QLGNSENFLLEVEKSSREKTMKNCVTGESSASKV 182
            L++LDDR VR  ERKA++LHF+    L + E+    +++         C    +  S V
Sbjct: 130 KLQQLDDRPVRASERKASRLHFASEDSLDSKESVPASLKEGRPHHPRAKCTEALAKQSLV 189

Query: 183 SANVDSRI-----EMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQE 237
               D  +     E + + G          +   STS +Q     D +         + +
Sbjct: 190 MDADDEAVLNLIAECEWDLG----------RPPGSTSFSQKGREADSRGSQESRHLLSPQ 239

Query: 238 VARREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDNKSSGSSPEKELIPKPD 297
           + + +      Q  E R  S R   +   EKM     Q+        G+ PE    P+P 
Sbjct: 240 LVQYQCGDSGKQGRETRRSSCRGCCL---EKMPWS--QLCGELPPLYGAEPEASRAPRPH 294

Query: 298 TFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGLENYDSCYSQTLSLHGSLGKRPQRSKNY 357
           T+   H  S    +D  DS+      L  ++            L   G   KR      +
Sbjct: 295 TYFTPHPDS----MDTEDSASSQKLDLSGEM--------VPGPLPAPGKCRKRRMPVGRF 342

Query: 358 QEYSIKPSNDIKTTASHSCGDLLTSLSNPDSSTGRLLKLSSDLYATTHFNSDPAVLVNVE 417
           Q +S +         +H       SLS  DSS  R               S P      E
Sbjct: 343 QTFSDQEGLGC-PERTHGSSVPKESLSRQDSSESR----------NGRTLSQPEASETEE 391

Query: 418 QQLSTSLDDLTPAHGSVPNNAVLGNRTTPLRTLLLSPGTSEHRKIFTKRSLSPSKRGFKW 477
           Q+     D   P+ GS  ++A+ G +T     LL +      R     RSL  ++     
Sbjct: 392 QRSRGVTDTREPSPGS--HSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAFLAQ 449

Query: 478 KDNILANLNLKHGFQDATG------------SEPLSSDLGSLHGLAGNHSPPISARTPHV 525
             +IL+++      QD++             S+ L S L             ++A   H 
Sbjct: 450 ARHILSSVEEFTAAQDSSAMVGEDVGSLALESKSLQSRLAEQQQQHAREMSEVTAELHHT 509

Query: 526 ATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLLLSLVVPAPSQPRCCSHPEDTMKAFC 585
              L  L + +DK    +  L          + LLLS+     S         DT     
Sbjct: 510 HKELDDLRQHLDKSLEENSRL----------KSLLLSMKKEVKS--------ADTAATLN 551

Query: 586 RRELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQLEEGAAISIVSGQQSHTYDD 645
            +   L+ + + +  ++  LKQ     LE    + E  Q L+E  + S+VS  + H   +
Sbjct: 552 LQIAGLQTSVKRLCGEIVELKQH----LEHYDKIQELTQMLQESHS-SLVSTNE-HLLQE 605

Query: 646 LLHKNQQLTMQVACLNQELAQLKKLEKTVAILHESQRS 683
           L     Q   +V  ++    +LK   KT+A+   S  S
Sbjct: 606 LSQVRAQHRAEVEQMHWSYQELK---KTMALFPHSSAS 640



 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 33/211 (15%)

Query: 512 GNHSPPISARTPHVATVLRQLLELVDKHWNGSGSLLLNKKFLGPARDLLLSLVVPAPSQP 571
           G+HS     +T   A +L  LL+LVD+ W G  SL  N+ FL  AR +L S+     +Q 
Sbjct: 406 GSHSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAFLAQARHILSSVEEFTAAQD 465

Query: 572 RCCSHPEDT-----------------MKAFCRRELELKEAAQLVPNDMESLKQKLVRVLE 614
                 ED                   +   R   E+         +++ L+Q L + LE
Sbjct: 466 SSAMVGEDVGSLALESKSLQSRLAEQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLE 525

Query: 615 EN-------LILSEKIQQLEEGAAISI-VSGQQSHTYDDLLHKNQQLTMQVACLNQELAQ 666
           EN       L + ++++  +  A +++ ++G Q+          ++L  ++  L Q L  
Sbjct: 526 ENSRLKSLLLSMKKEVKSADTAATLNLQIAGLQTSV--------KRLCGEIVELKQHLEH 577

Query: 667 LKKLEKTVAILHESQRSLVVTNEYLLQQLNK 697
             K+++   +L ES  SLV TNE+LLQ+L++
Sbjct: 578 YDKIQELTQMLQESHSSLVSTNEHLLQELSQ 608


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 37/203 (18%)

Query: 20  LEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQD--- 76
           LE+   +E L+L  +  GKI  +    +    LR L+LS N I+ ++GI+ +C+LQ    
Sbjct: 121 LEKCVKLEVLNLSYNLIGKIEKLDKLLK----LRELNLSYNKISKIEGIENMCNLQKLNL 176

Query: 77  ---------------------LNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTD 115
                                LNL  N I SL ++S+L+PL  L  L L  NPVV     
Sbjct: 177 AGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTL-PH 235

Query: 116 YRLFAVYTLQTLEKLDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTG 175
           Y  F ++ L++LE L+ + V   +R+ A   FS        L EVE+  R+   K   T 
Sbjct: 236 YLQFTIFHLRSLESLEGQPVTTQDRQEAFERFS--------LEEVERLERDLEKKMIETE 287

Query: 176 ESSASKVSANVDSRIEMDSNKGL 198
           E  + +     + + +   NK L
Sbjct: 288 ELKSKQTRFLEEIKNQDKLNKSL 310



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 24/129 (18%)

Query: 588  ELELKEAAQLVPNDMESLKQKLVRVLEENLILSEKIQQL-EEGAAISIVSGQQSHTYDDL 646
            ++ LKE    +  ++   K KL +VL + L   E+++ L EE      +    S T   L
Sbjct: 1968 KVTLKEQQHQLEKELTDQKSKLDQVLSKVLAAEERVRTLQEEERWCESLEKTLSQTKRQL 2027

Query: 647  LHKNQQLTMQVACL------------------NQELAQLKKLEKTVAILHES---QRSLV 685
              + QQL  +   L                  NQ L + KK EK VA L E+   QRS +
Sbjct: 2028 SEREQQLVEKSGELLALQKEADSMRADFSLLRNQFLTERKKAEKQVASLKEALKIQRSQL 2087

Query: 686  VTNEYLLQQ 694
              N  LL+Q
Sbjct: 2088 EKN--LLEQ 2094


>gi|21389483 leucine-rich repeats and guanylate kinase domain
           containing [Homo sapiens]
          Length = 825

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 48  NFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLN 107
           + K L++LDLS N I+SL+G++    L+ +NL  N I  L E+  ++ LP L+ L+L  N
Sbjct: 278 DLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIAELREIEYIKNLPILRVLNLLEN 337

Query: 108 PVVRKDTDYRLFAVYTLQTLEKLDDRTVREGERKAA 143
           P+  K ++Y  F ++ L  L +LD + ++  E+ +A
Sbjct: 338 PIQEK-SEYWFFVIFMLLRLTELDQKKIKVEEKVSA 372


>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
          Length = 466

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 3   EQWELDEEGIRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLI 62
           E+  L ++ I RL  +     +L + L LQ +  GKI ++       K L  L+L+ N I
Sbjct: 24  EELSLHQQEIERLEHIDKWCRDL-KILYLQNNLIGKIENVS----KLKKLEYLNLALNNI 78

Query: 63  TSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVY 122
             ++ ++    L  L+L  N I  L  +  LQ    LKEL L  NP    D  YR F V 
Sbjct: 79  EKIENLEGCEELAKLDLTVNFIGELSSIKNLQHNIHLKELFLMGNPCASFD-HYREFVVA 137

Query: 123 TLQTLEKLDDRTVREGERKAAKLHFSQL-----GNSENFLLEVEKSSREKTMKNCVTGES 177
           TL  L+ LD + +   ER  A   +S +        ++  L+  K   E   K+    ++
Sbjct: 138 TLPQLKWLDGKEIEPSERIKALQDYSVIEPQIREQEKDHCLKRAKLKEEAQRKHQEEDKN 197

Query: 178 SASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLD 227
              + +A  D R   D N  L     + E KD L    T+ + T+  KLD
Sbjct: 198 EDKRSNAGFDGRWYTDINATL----SSLESKDHLQAPDTEEHNTK--KLD 241


>gi|239754500 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 18  LTLEQPELVESLSLQGS--------YAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQ 69
           L L + EL E + L           +  K+H I    RN+  L  L L+ N I  ++G+ 
Sbjct: 99  LFLSKKELTEVIDLSRFKKLKYLWLHHNKLHGITFLTRNYC-LTELYLNNNAIFEIEGLH 157

Query: 70  YLCSLQDLNLYYNNIPSL-VEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLE 128
           YL SL  L L++N + ++   V  L+ +  LK L L  NP+ + +  YRL+ +Y L  +E
Sbjct: 158 YLPSLHILLLHHNELTNIDATVKELKGMLNLKILSLYQNPLCQYNL-YRLYIIYHLPGVE 216

Query: 129 KLDDRTVREGERKA 142
            LD   V E ER++
Sbjct: 217 LLDRNQVTEKERRS 230


>gi|239749060 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 18  LTLEQPELVESLSLQGS--------YAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQ 69
           L L + EL E + L           +  K+H I    RN+  L  L L+ N I  ++G+ 
Sbjct: 99  LFLSKKELTEVIDLSRFKKLKYLWLHHNKLHGITFLTRNYC-LTELYLNNNAIFEIEGLH 157

Query: 70  YLCSLQDLNLYYNNIPSL-VEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLE 128
           YL SL  L L++N + ++   V  L+ +  LK L L  NP+ + +  YRL+ +Y L  +E
Sbjct: 158 YLPSLHILLLHHNELTNIDATVKELKGMLNLKILSLYQNPLCQYNL-YRLYIIYHLPGVE 216

Query: 129 KLDDRTVREGERKA 142
            LD   V E ER++
Sbjct: 217 LLDRNQVTEKERRS 230


>gi|239743086 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 18  LTLEQPELVESLSLQGS--------YAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQ 69
           L L + EL E + L           +  K+H I    RN+  L  L L+ N I  ++G+ 
Sbjct: 99  LFLSKKELTEVIDLSRFKKLKYLWLHHNKLHGITFLTRNYC-LTELYLNNNAIFEIEGLH 157

Query: 70  YLCSLQDLNLYYNNIPSL-VEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLE 128
           YL SL  L L++N + ++   V  L+ +  LK L L  NP+ + +  YRL+ +Y L  +E
Sbjct: 158 YLPSLHILLLHHNELTNIDATVKELKGMLNLKILSLYQNPLCQYNL-YRLYIIYHLPGVE 216

Query: 129 KLDDRTVREGERKA 142
            LD   V E ER++
Sbjct: 217 LLDRNQVTEKERRS 230


>gi|239508737 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 18  LTLEQPELVESLSLQGS--------YAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQ 69
           L L + EL E + L           +  K+H I    RN+  L  L L+ N I  ++G+ 
Sbjct: 99  LFLSKKELTEVIDLSRFKKLKYLWLHHNKLHGITFLTRNYC-LTELYLNNNAIFEIEGLH 157

Query: 70  YLCSLQDLNLYYNNIPSL-VEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLE 128
           YL SL  L L++N + ++   V  L+ +  LK L L  NP+ + +  YRL+ +Y L  +E
Sbjct: 158 YLPSLHILLLHHNELTNIDATVKELKGMLNLKILSLYQNPLCQYNL-YRLYIIYHLPGVE 216

Query: 129 KLDDRTVREGERKA 142
            LD   V E ER++
Sbjct: 217 LLDRNQVTEKERRS 230


>gi|206725447 leucine rich repeat containing 23 isoform a [Homo
           sapiens]
          Length = 343

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGI-QYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKEL 102
           +   +  NL +L L  N I +L G  + + SLQ LNL  N + +L E+++L+ LP L+ L
Sbjct: 216 EGLEDLSNLTTLHLRDNQIDTLSGFSREMKSLQYLNLRGNMVANLGELAKLRDLPKLRAL 275

Query: 103 DLRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVREGERKAA 143
            L  NP    +T YR  A+  +  LE+LD     E ER  A
Sbjct: 276 VLLDNPCT-DETSYRQEALVQMPYLERLDKEFYEEEERAEA 315


>gi|42542396 leucine rich repeat containing 23 isoform a [Homo
           sapiens]
          Length = 343

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGI-QYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKEL 102
           +   +  NL +L L  N I +L G  + + SLQ LNL  N + +L E+++L+ LP L+ L
Sbjct: 216 EGLEDLSNLTTLHLRDNQIDTLSGFSREMKSLQYLNLRGNMVANLGELAKLRDLPKLRAL 275

Query: 103 DLRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVREGERKAA 143
            L  NP    +T YR  A+  +  LE+LD     E ER  A
Sbjct: 276 VLLDNPCT-DETSYRQEALVQMPYLERLDKEFYEEEERAEA 315


>gi|4826651 hypothetical protein LOC755 [Homo sapiens]
          Length = 256

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 51  NLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVV 110
           +L  + LS N I++L+ +     L +L L  N IPSL E+  L+ LP L+ L L  NP  
Sbjct: 41  SLEVITLSVNSISTLEPVSRCQRLSELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCC 100

Query: 111 RKDTD-YRLFAVYTLQTLEKLDDRTVREGERKAA 143
                 YR+  + TL  L+KLD++ V E E   A
Sbjct: 101 GTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRA 134


>gi|157674358 leucine rich repeat containing 50 [Homo sapiens]
          Length = 725

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 33/247 (13%)

Query: 20  LEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQYL---CSLQD 76
           LE  + +++L+L  +Y   I ++         L +L ++ N + +++ IQ+L     L  
Sbjct: 169 LEPLQKLDALNLSNNYIKTIENLSC----LPVLNTLQMAHNHLETVEDIQHLQECLRLCV 224

Query: 77  LNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVR 136
           L+L +N +     +S L+ +P L+ L+L  NPV+R+  +YR      L+ L  LDDR V 
Sbjct: 225 LDLSHNKLSDPEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLTYLDDRPVF 284

Query: 137 EGERKAA-----------KLHFSQLGNSEN----------FLLEVEKSSREKTMKNCVTG 175
             +R  A           K    Q  + E            +++     R++  ++   G
Sbjct: 285 PKDRACAEAWARGGYAAEKEERQQWESRERKKITDSIEALAMIKQRAEERKRQRESQERG 344

Query: 176 ESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQT 235
           E ++S    NV +     S +G   P  +RE +  +     +    +D+     P G + 
Sbjct: 345 EMTSSDDGENVPA-----SAEGKEEPPGDRETRQKMELFVKESFEAKDELCPEKPSGEEP 399

Query: 236 QEVARRE 242
              A+RE
Sbjct: 400 PVEAKRE 406


>gi|55743114 leucine rich repeat containing 49 [Homo sapiens]
          Length = 686

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 19/144 (13%)

Query: 20  LEQPELVESLSLQGSYAGKIHSIG------------------DAFRNFKNLRSLDLSRNL 61
           LE  + ++ L L G+   KI +I                   D      +L  L+L  N 
Sbjct: 174 LENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 233

Query: 62  ITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAV 121
           IT ++ +  L  LQ L L +NNI S   VS L     L ++    NP+  +++ Y+   +
Sbjct: 234 ITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIA-QESWYKHTVL 292

Query: 122 YTLQTLEKLDDRTVREGERKAAKL 145
             +  L +LD + + E ER+ A +
Sbjct: 293 QNMMQLRQLDMKRITEEERRMASV 316


>gi|239752518 PREDICTED: similar to leucine rich repeat containing
           50, partial [Homo sapiens]
          Length = 489

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELD 103
           D      +L  L+L  N IT ++ +  L  LQ L L +NNI S   VS L     L ++ 
Sbjct: 41  DNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDIT 100

Query: 104 LRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVREGERKAAKL 145
              NP+  +++ Y+   +  +  L +LD + + E ER+ A +
Sbjct: 101 FDGNPIA-QESWYKHTVLQNMMQLRQLDMKRITEEERRMASV 141



 Score = 39.3 bits (90), Expect = 0.014
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 51  NLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPV 109
           NL  LDL  N IT ++ I +LC L+ LNL  N    L  V  L  L  L EL+LR N +
Sbjct: 4   NLDVLDLHGNQITKIENINHLCELRVLNLARN---FLSHVDNLNGLDSLTELNLRHNQI 59


>gi|21687175 leucine rich transmembrane and 0-methyltransferase
           domain containing isoform 1 [Homo sapiens]
          Length = 192

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 50  KNLRSLDLSRNLITSLKGI-QYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNP 108
           +NL  +DLS N +TS+  +     +L  L L+ N+I  L EV++L  LP L+ L L  NP
Sbjct: 79  ENLAWIDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNP 138

Query: 109 VVRKDTDYRLFAVYTLQTLEKLDDRTVREGERKAAKL 145
            + ++  YR + + TL  +   D   V + +R  A++
Sbjct: 139 -MEEEKGYRQYVLCTLSRITTFDFSGVTKADRTTAEV 174


>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
          Length = 1341

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 19/122 (15%)

Query: 603  ESLKQKLVRVLEENLILSEKIQQLEEGAAISIVS--------GQQSHTYDD---LLHKNQ 651
            E ++++L R+ E++    E  QQLE+   I  +          Q SHT+++   LLH+N 
Sbjct: 990  EKIREELGRIEEQHRKELEVKQQLEQALRIQDIELKSVESNLNQVSHTHENENYLLHENC 1049

Query: 652  QLTMQVACLNQELAQLK--------KLEKTVAILHESQRSLVVTNEYLLQQLNKEPKGYS 703
             L  ++A L  E+A LK        K  + + IL E    L +T +   + L K    YS
Sbjct: 1050 MLKKEIAMLKLEIATLKHQYQEKENKYFEDIKILKEKNAELQMTLKLKEESLTKRASQYS 1109

Query: 704  GK 705
            G+
Sbjct: 1110 GQ 1111


>gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo
           sapiens]
          Length = 255

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 43/256 (16%)

Query: 6   ELDEEG-----IRRLGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRN 60
           ELD  G     I  LGA TL+Q    +++    +   K+    D F   + L++L ++ N
Sbjct: 23  ELDLRGYKIPVIENLGA-TLDQ---FDAIDFSDNEIRKL----DGFPLLRRLKTLLVNNN 74

Query: 61  LITSL-KGI-QYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKEL---DLRLNPVVRKDTD 115
            I  + +G+ Q L  L +L L  N   SLVE+  L PL  LK L    +  NPV  K   
Sbjct: 75  RICRIGEGLDQALPCLTELILTNN---SLVELGDLDPLASLKSLTYLSILRNPVTNKK-H 130

Query: 116 YRLFAVYTLQTLEKLDDRTVREGERKAAKLHFSQLGNSENFLLEVEKSSREKTMKNCVTG 175
           YRL+ +Y +  +  LD + V+  ER+ A+  F     ++   L  + + R KT       
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQ---LAKDIARRSKTF------ 181

Query: 176 ESSASKVSANVDSRIEMDSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQT 235
                    N  + +  D  KG   P     IK++++ ++T       ++L       Q 
Sbjct: 182 ---------NPGAGLPTDKKKGGPSPGDVEAIKNAIANASTL---AEVERLKGLLQSGQI 229

Query: 236 QEVARREMPSDNHQED 251
               RR  P+D+ +E+
Sbjct: 230 PGRERRSGPTDDGEEE 245


>gi|38348406 leucine rich repeat containing 33 [Homo sapiens]
          Length = 692

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 15  LGALTLEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQY--LC 72
           + AL L+    + S+SL G+   ++      F   + LR LDL RN I  ++G  +  L 
Sbjct: 148 MAALMLQNLSSLRSVSLAGNTIMRLDD--SVFEGLERLRELDLQRNYIFEIEGGAFDGLA 205

Query: 73  SLQDLNLYYNNIPSLVE--VSRLQPL 96
            L+ LNL +NN+P +V+  ++RL+ L
Sbjct: 206 ELRHLNLAFNNLPCIVDFGLTRLRVL 231



 Score = 30.4 bits (67), Expect = 6.3
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 46  FRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLP-FLKELDL 104
           F  F NLR LDLS N +T+        +L+ L+L  N++ +L + +  + L   L+ + L
Sbjct: 532 FSGFGNLRDLDLSGNCLTTFPRFGGSLALETLDLRRNSLTALPQKAVSEQLSRGLRTIYL 591

Query: 105 RLNP 108
             NP
Sbjct: 592 SQNP 595


>gi|194272228 leucine rich repeat containing 48 isoform b [Homo
           sapiens]
          Length = 457

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 52/179 (29%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNN-------------------- 83
           D    F+NLR L L  N+I  ++G++ L  L  L+L +NN                    
Sbjct: 59  DNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFN 118

Query: 84  -----IPSLVEVSRLQPLPF-------------------LKELDLRLNPVVRKDTDYRLF 119
                I SL  + +LQ L                     L+ L L  NP+   + DY++F
Sbjct: 119 NRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAE-DYKMF 177

Query: 120 AVYTLQTLEKLDDRTVREGERKAA----KLHFSQLGNSENFL---LEVEKSSREKTMKN 171
               L  L  LD R + +  +K A    +    +L + EN +   LE E++ RE+  K+
Sbjct: 178 ICAYLPDLMYLDYRRIDDHTKKLAEAKHQYSIDELKHQENLMQAQLEDEQAQREELEKH 236


>gi|194272226 leucine rich repeat containing 48 isoform b [Homo
           sapiens]
          Length = 457

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 52/179 (29%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNN-------------------- 83
           D    F+NLR L L  N+I  ++G++ L  L  L+L +NN                    
Sbjct: 59  DNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFN 118

Query: 84  -----IPSLVEVSRLQPLPF-------------------LKELDLRLNPVVRKDTDYRLF 119
                I SL  + +LQ L                     L+ L L  NP+   + DY++F
Sbjct: 119 NRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAE-DYKMF 177

Query: 120 AVYTLQTLEKLDDRTVREGERKAA----KLHFSQLGNSENFL---LEVEKSSREKTMKN 171
               L  L  LD R + +  +K A    +    +L + EN +   LE E++ RE+  K+
Sbjct: 178 ICAYLPDLMYLDYRRIDDHTKKLAEAKHQYSIDELKHQENLMQAQLEDEQAQREELEKH 236


>gi|194272224 leucine rich repeat containing 48 isoform a [Homo
           sapiens]
          Length = 523

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 52/179 (29%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNN-------------------- 83
           D    F+NLR L L  N+I  ++G++ L  L  L+L +NN                    
Sbjct: 59  DNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFN 118

Query: 84  -----IPSLVEVSRLQPLPF-------------------LKELDLRLNPVVRKDTDYRLF 119
                I SL  + +LQ L                     L+ L L  NP+   + DY++F
Sbjct: 119 NRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAE-DYKMF 177

Query: 120 AVYTLQTLEKLDDRTVREGERKAA----KLHFSQLGNSENFL---LEVEKSSREKTMKN 171
               L  L  LD R + +  +K A    +    +L + EN +   LE E++ RE+  K+
Sbjct: 178 ICAYLPDLMYLDYRRIDDHTKKLAEAKHQYSIDELKHQENLMQAQLEDEQAQREELEKH 236


>gi|194272222 leucine rich repeat containing 48 isoform a [Homo
           sapiens]
          Length = 523

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 52/179 (29%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNN-------------------- 83
           D    F+NLR L L  N+I  ++G++ L  L  L+L +NN                    
Sbjct: 59  DNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFN 118

Query: 84  -----IPSLVEVSRLQPLPF-------------------LKELDLRLNPVVRKDTDYRLF 119
                I SL  + +LQ L                     L+ L L  NP+   + DY++F
Sbjct: 119 NRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAE-DYKMF 177

Query: 120 AVYTLQTLEKLDDRTVREGERKAA----KLHFSQLGNSENFL---LEVEKSSREKTMKN 171
               L  L  LD R + +  +K A    +    +L + EN +   LE E++ RE+  K+
Sbjct: 178 ICAYLPDLMYLDYRRIDDHTKKLAEAKHQYSIDELKHQENLMQAQLEDEQAQREELEKH 236


>gi|10190682 chromobox homolog 8 [Homo sapiens]
          Length = 389

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 193 DSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVARREMPSDNHQE-- 250
           DS +G+ IP+P R  +D  STS  +  G R+  L      T T    R E P D  ++  
Sbjct: 97  DSARGIRIPYPGRSPQDLASTSRAR-EGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRD 155

Query: 251 -DEFRHYSPRQSTVRSPEKMTREGYQVSFLDNK-SSGSSPEKELIPKP 296
            D  R     +   R  E+        S +D+K SS     K+  PKP
Sbjct: 156 RDRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKP 203


>gi|31377705 centrosomal protein 97kDa [Homo sapiens]
          Length = 865

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 39  IHSIGDAFRNFKNLRSLDLSRNLITSLK-GIQYLC-SLQDLNLYYNNIPSLVEVSRLQPL 96
           I  IGD  +   +L++L L  N+ITSL+    YL  SL  L+L  N I  L E+S L  L
Sbjct: 136 ISQIGDLSK-LVSLKTLLLHGNIITSLRMAPAYLPRSLAILSLAENEIRDLNEISFLASL 194

Query: 97  PFLKELDLRLNPVVRKDT-----DYRLFAVYTLQTLEKLDDRTVREGERKAAKLHFSQ 149
             L++L +  NP V         DYR + V     L  LD   + + E   A+  +SQ
Sbjct: 195 TELEQLSIMNNPCVMATPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQ 252



 Score = 30.4 bits (67), Expect = 6.3
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 52  LRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELDLRLNPVVR 111
           LR L+L  N I  ++G++ L  L+ LNL  NN+ ++ +++       L+ LDL  N + +
Sbjct: 82  LRVLNLPHNSIGCVEGLKELVHLEWLNLAGNNLKAMEQINSCTA---LQHLDLSDNNISQ 138

Query: 112 KDTDYRLFAVYTL 124
                +L ++ TL
Sbjct: 139 IGDLSKLVSLKTL 151


>gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo
           sapiens]
          Length = 360

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 44  DAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPSLVEVSRLQPLPFLKELD 103
           +   N   L  LD++ N I  ++ I +L  LQ+  +  N + S  ++  L+    L+ + 
Sbjct: 268 EGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVY 327

Query: 104 LRLNPVVRKDTDYRLFAVYTLQTLEKLDDRTVR 136
           L  NP ++KD  YR   +  L ++ ++D   VR
Sbjct: 328 LERNP-LQKDPQYRRKVMLALPSVRQIDATFVR 359



 Score = 38.1 bits (87), Expect = 0.030
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 27  ESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNLYYNNIPS 86
           E + L     GKI    + F   K +++L L +NLI  ++ ++ L SL++L+LY N I  
Sbjct: 79  EDVDLNHYRIGKI----EGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIK- 133

Query: 87  LVEVSRLQPLPFLKELDLRLN 107
             ++  L+ L  L+ LD+  N
Sbjct: 134 --KIENLEALTELEILDISFN 152



 Score = 38.1 bits (87), Expect = 0.030
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 20  LEQPELVESLSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLKGIQYLCSLQDLNL 79
           LE+ + +  L L  +   KI ++         L  LD+S NL+ +++G+  L  L+ L L
Sbjct: 116 LEELQSLRELDLYDNQIKKIENL----EALTELEILDISFNLLRNIEGVDKLTRLKKLFL 171

Query: 80  YYNNIPSLVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLFAVY-------TLQTLEKLDD 132
             N I  +  +S L  L  L+    R+  +   DT   L +++        LQ L+ L +
Sbjct: 172 VNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 231

Query: 133 RTV 135
            TV
Sbjct: 232 LTV 234


>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 1 [Homo sapiens]
          Length = 1635

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 29  LSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLK--GIQYLCSLQDLNLYYNNIPS 86
           L+ QG+Y   I   G+ ++ +     L L  N +T L     + L SLQ L+L  N I S
Sbjct: 870 LNFQGNYISYID--GNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQS 927

Query: 87  LVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLF-AVYTLQTLEKL 130
            +E    +PLPFLK ++L  N +   +  +  F A + +Q L KL
Sbjct: 928 -IERHTFEPLPFLKFINLSCNVIT--ELSFGTFQAWHGMQFLHKL 969


>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 2 [Homo sapiens]
          Length = 1700

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 29  LSLQGSYAGKIHSIGDAFRNFKNLRSLDLSRNLITSLK--GIQYLCSLQDLNLYYNNIPS 86
           L+ QG+Y   I   G+ ++ +     L L  N +T L     + L SLQ L+L  N I S
Sbjct: 870 LNFQGNYISYID--GNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQS 927

Query: 87  LVEVSRLQPLPFLKELDLRLNPVVRKDTDYRLF-AVYTLQTLEKL 130
            +E    +PLPFLK ++L  N +   +  +  F A + +Q L KL
Sbjct: 928 -IERHTFEPLPFLKFINLSCNVIT--ELSFGTFQAWHGMQFLHKL 969


>gi|87299628 biorientation of chromosomes in cell division 1-like
           [Homo sapiens]
          Length = 3051

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 35/252 (13%)

Query: 124 LQTLEKLDDRTVREGERKAAKLHFSQ---LGNSENFLLEVEKSSREKTMKNCVTGESSAS 180
           L    K D R V E  +K  +        L  SE+   E EK S  K +K+ V  +S  S
Sbjct: 572 LSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEH--CEKEKISSSKELKH-VHAKSEPS 628

Query: 181 KVSANVDSRIEM-DSNKGLFIPFPNREIKDSLSTSATQGNGTRDQKLDTFPLGTQTQEVA 239
           K +  +   + + D NK        RE K   ST      G +++        T T++V 
Sbjct: 629 KPARRLSESLHVVDENKNE--SKLEREHKRRTSTPVIM-EGVQEE--------TDTRDVK 677

Query: 240 RREMPSDNHQEDEFRHYSPRQSTVRSPEKMTREGYQVSFLDN------KSSGSSPEKELI 293
           R+   S+   E+  +    ++ST+++ + + ++  +   L +      KSS   PE+E  
Sbjct: 678 RQVERSEICTEEPQK----QKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKT 733

Query: 294 PKPDTFHLTHDASLSKCLDVGDSSQIHPYQLPSDVGL---ENYDSCYSQTLSLHGSLGKR 350
           P  D   + H          GD +++H     S+ GL   EN      QT        +R
Sbjct: 734 PSEDKLSVKHKYKGDCMHKTGDETELH----SSEKGLKVEENIQKQSQQTKLSSDDKTER 789

Query: 351 PQRSKNYQEYSI 362
             + +N ++ S+
Sbjct: 790 KSKHRNERKLSV 801


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,108,131
Number of Sequences: 37866
Number of extensions: 1352880
Number of successful extensions: 3809
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 3604
Number of HSP's gapped (non-prelim): 364
length of query: 754
length of database: 18,247,518
effective HSP length: 110
effective length of query: 644
effective length of database: 14,082,258
effective search space: 9068974152
effective search space used: 9068974152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.