Guide to the Human Genome
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Name: FLT1 Sequence: fasta or formatted (733aa) NCBI GI: 229892300
Description:

fms-related tyrosine kinase 1 isoform 3 precursor

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [1338aa] fms-related tyrosine kinase 1 isoform 1 precursor
alt prot [687aa] fms-related tyrosine kinase 1 isoform 2 precursor
alt prot [541aa] fms-related tyrosine kinase 1 isoform 4 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         36           2
 C cysteine            2.5         18           1
 D aspartate           3.7         27           1
 E glutamate           5.0         37           2
 F phenylalanine       2.6         19           1
 G glycine             4.6         34           1
 H histidine           2.7         20           1
 I isoleucine          7.5         55           2
 K lysine              7.0         51           3
 L leucine             8.6         63           3
 M methionine          2.0         15           1
 N asparagine          5.5         40           2
 P proline             4.4         32           1
 Q glutamine           3.4         25           2
 R arginine            4.9         36           3
 S serine             11.1         81          12
 T threonine           9.0         66           2
 V valine              5.7         42           2
 W tryptophan          1.2          9           1
 Y tyrosine            3.7         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fms-related tyrosine kinase 1 isoform 3 precursor [... 
FLT1                  0.968   fms-related tyrosine kinase 1 isoform 1 precursor [...
FLT1                  0.896   fms-related tyrosine kinase 1 isoform 2 precursor [...
FLT1                  0.708   fms-related tyrosine kinase 1 isoform 4 precursor [...
KDR                   0.236   kinase insert domain receptor precursor 
FLT4                  0.232   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.232   fms-related tyrosine kinase 4 isoform 2 precursor [...
PDGFRA                0.084   platelet-derived growth factor receptor alpha precurs...
PDGFRB                0.057   platelet-derived growth factor receptor beta precurso...
HMCN1                 0.053   hemicentin 1 
KIT                   0.047   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.047   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
PDGFRL                0.046   platelet-derived growth factor receptor-like protein ...
IGSF10                0.046   immunoglobulin superfamily, member 10 
CNTN5                 0.044   contactin 5 isoform long 
CNTN5                 0.044   contactin 5 isoform short 
HMCN2                 0.042   PREDICTED: hemicentin 2 
HMCN2                 0.042   PREDICTED: hemicentin 2 
HMCN2                 0.042   PREDICTED: hemicentin 2 
ROBO2                 0.041   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.041   roundabout, axon guidance receptor, homolog 2 isofor...
ROBO1                 0.041   roundabout 1 isoform b 
ROBO1                 0.041   roundabout 1 isoform a 
TTN                   0.040   titin isoform N2-A 
LOC100292387          0.039   PREDICTED: similar to hemicentin 2 
ROBO1                 0.038   roundabout 1 isoform d 
DSCAM                 0.037   Down syndrome cell adhesion molecule isoform CHD2-42...
NCAM1                 0.036   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.036   neural cell adhesion molecule 1 isoform 3 
NCAM1                 0.034   neural cell adhesion molecule 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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