Guide to the Human Genome
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Name: PRMT6 Sequence: fasta or formatted (375aa) NCBI GI: 227908867
Description:

protein arginine methyltransferase 6

Referenced in:

Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         30           2
 C cysteine            1.6          6           1
 D aspartate           4.5         17           1
 E glutamate          10.4         39           3
 F phenylalanine       3.2         12           1
 G glycine             9.6         36           4
 H histidine           2.4          9           1
 I isoleucine          2.9         11           1
 K lysine              3.5         13           2
 L leucine            10.7         40           3
 M methionine          2.4          9           1
 N asparagine          1.1          4           1
 P proline             4.3         16           1
 Q glutamine           4.8         18           2
 R arginine            8.0         30           2
 S serine              6.4         24           2
 T threonine           3.7         14           1
 V valine              7.7         29           2
 W tryptophan          2.1          8           1
 Y tyrosine            2.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein arginine methyltransferase 6 
PRMT2                 0.245   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.245   HMT1 hnRNP methyltransferase-like 1 
PRMT8                 0.233   HMT1 hnRNP methyltransferase-like 4 
PRMT1                 0.226   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.225   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
PRMT1                 0.225   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT3                 0.221   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.221   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.221   protein arginine methyltransferase 3 isoform 1 [Homo...
CARM1                 0.219   coactivator-associated arginine methyltransferase 1 ...
PRMT10                0.065   protein arginine methyltransferase 10 (putative) [Ho...
PRMT7                 0.044   protein arginine methyltransferase 7 
PRMT5                 0.023   protein arginine methyltransferase 5 isoform b [Homo...
PRMT5                 0.023   protein arginine methyltransferase 5 isoform a [Homo...
C12orf72              0.015   hypothetical protein LOC254013 
C12orf72              0.015   hypothetical protein LOC254013 
C12orf72              0.015   hypothetical protein LOC254013 
HOXD11                0.010   homeobox D11 
FAM119B               0.010   hypothetical protein LOC25895 isoform b 
C16orf68              0.010   hypothetical protein LOC79091 
HNRNPU                0.008   heterogeneous nuclear ribonucleoprotein U isoform a ...
SLC24A1               0.008   solute carrier family 24 (sodium/potassium/calcium ex...
ANKRD24               0.008   ankyrin repeat domain 24 
KIF3B                 0.008   kinesin family member 3B 
CFDP1                 0.008   craniofacial development protein 1 
FAM9A                 0.008   family with sequence similarity 9, member A 
FAM119B               0.007   hypothetical protein LOC25895 isoform a 
THSD7B                0.007   thrombospondin, type I, domain containing 7B 
DCAF15                0.007   DDB1 and CUL4 associated factor 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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