Guide to the Human Genome
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Name: PLIN Sequence: fasta or formatted (522aa) NCBI GI: 223718196
Description:

perilipin

Referenced in:

Adipose Tissue

Other entries for this name:
alt mRNA [522aa] perilipin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.6         66           3
 C cysteine            1.0          5           1
 D aspartate           3.6         19           1
 E glutamate           8.6         45           5
 F phenylalanine       1.5          8           2
 G glycine             6.3         33           2
 H histidine           1.9         10           1
 I isoleucine          1.9         10           1
 K lysine              4.0         21           2
 L leucine            10.0         52           2
 M methionine          1.7          9           1
 N asparagine          1.9         10           1
 P proline             8.4         44           2
 Q glutamine           4.0         21           2
 R arginine            7.1         37           3
 S serine              8.8         46           2
 T threonine           6.1         32           2
 V valine              7.9         41           2
 W tryptophan          1.1          6           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   perilipin 
PLIN                  1.000   perilipin 
ADFP                  0.105   adipose differentiation-related protein 
M6PRBP1               0.095   mannose 6 phosphate receptor binding protein 1 [Homo...
LSDP5                 0.074   lipid storage droplet protein 5 
MICAL3                0.019   microtubule associated monoxygenase, calponin and L...
AMOT                  0.018   angiomotin isoform 2 
AMOT                  0.018   angiomotin isoform 1 
LOC284297             0.017   hypothetical protein LOC284297 
SAMD1                 0.015   sterile alpha motif domain containing 1 
SH3BP1                0.014   SH3-domain binding protein 1 
GRIK5                 0.013   glutamate receptor KA2 precursor 
ZC3H18                0.012   zinc finger CCCH-type containing 18 
DZIP1L                0.012   DAZ interacting protein 1-like 
HOXD4                 0.012   homeobox D4 
LOC100129852          0.012   PREDICTED: hypothetical protein 
LOC100129852          0.012   PREDICTED: hypothetical protein 
LOC100129852          0.012   PREDICTED: hypothetical protein 
MMP15                 0.011   matrix metalloproteinase 15 preproprotein 
LOC100290023          0.011   PREDICTED: hypothetical protein XP_002348147 
SLC38A10              0.011   solute carrier family 38, member 10 isoform a 
OBFC2B                0.011   oligonucleotide/oligosaccharide-binding fold contain...
HIVEP1                0.011   human immunodeficiency virus type I enhancer bindin...
SRRM1                 0.011   serine/arginine repetitive matrix 1 
TAF4                  0.010   TBP-associated factor 4 
SMARCC1               0.010   SWI/SNF-related matrix-associated actin-dependent r...
COL4A5                0.010   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.010   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.010   type IV collagen alpha 5 isoform 3 precursor 
SYNJ2                 0.010   synaptojanin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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