Guide to the Human Genome
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Name: SLC36A3 Sequence: fasta or formatted (470aa) NCBI GI: 222446640
Description:

solute carrier family 36, member 3 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [511aa] solute carrier family 36, member 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         29           1
 C cysteine            2.3         11           1
 D aspartate           1.9          9           1
 E glutamate           3.4         16           1
 F phenylalanine       5.3         25           2
 G glycine             6.2         29           1
 H histidine           2.1         10           1
 I isoleucine          9.4         44           3
 K lysine              2.3         11           1
 L leucine            15.5         73           2
 M methionine          4.3         20           2
 N asparagine          4.0         19           1
 P proline             4.5         21           1
 Q glutamine           4.0         19           2
 R arginine            1.7          8           1
 S serine              9.1         43           4
 T threonine           5.7         27           2
 V valine              7.2         34           1
 W tryptophan          1.1          5           1
 Y tyrosine            3.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 36, member 3 isoform 2 
SLC36A3               0.978   solute carrier family 36, member 3 isoform 1 
SLC36A1               0.606   solute carrier family 36 member 1 
SLC36A2               0.565   solute carrier family 36, member 2 
SLC36A4               0.445   solute carrier family 36 (proton/amino acid symporte...
SLC32A1               0.047   solute carrier family 32, member 1 
SLC38A8               0.044   solute carrier family 38, member 8 
SLC38A6               0.040   solute carrier family 38, member 6 
SLC38A10              0.032   solute carrier family 38, member 10 isoform a 
SLC38A10              0.032   solute carrier family 38, member 10 isoform b 
SLC38A1               0.032   amino acid transporter system A1 
SLC38A1               0.032   amino acid transporter system A1 
SLC38A5               0.030   solute carrier family 38, member 5 
SLC38A7               0.026   solute carrier family 38, member 7 
SLC38A3               0.023   solute carrier family 38, member 3 
SLC38A2               0.022   solute carrier family 38, member 2 
SLC38A4               0.021   solute carrier family 38, member 4 
SLC38A4               0.021   solute carrier family 38, member 4 
SLC38A9               0.013   solute carrier family 38, member 9 
OR13C4                0.009   olfactory receptor, family 13, subfamily C, member 4...
OR11G2                0.008   olfactory receptor, family 11, subfamily G, member 2...
TMBIM4                0.007   transmembrane BAX inhibitor motif containing 4 [Hom...
C10orf72              0.006   hypothetical protein LOC196740 isoform 1 
CDH16                 0.006   cadherin 16 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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