CAPN8 14250

Name: CAPN8	Sequence: fasta or formatted (703aa)		NCBI GI: 221554549
Description: calpain 8		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 51 2 C cysteine 2.6 18 2 D aspartate 5.7 40 2 E glutamate 8.0 56 2 F phenylalanine 5.1 36 2 G glycine 7.8 55 2 H histidine 1.7 12 1 I isoleucine 4.4 31 2 K lysine 5.3 37 2 L leucine 10.8 76 2 M methionine 1.1 8 1 N asparagine 3.8 27 1 P proline 4.1 29 2 Q glutamine 5.1 36 2 R arginine 5.0 35 2 S serine 6.7 47 2 T threonine 4.7 33 1 V valine 5.3 37 2 W tryptophan 2.4 17 1 Y tyrosine 3.1 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 8 CAPN2 0.630 calpain 2 isoform 1 CAPN1 0.590 calpain 1, large subunit CAPN2 0.559 calpain 2 isoform 2 CAPN11 0.502 calpain 11 CAPN3 0.491 calpain 3 isoform c CAPN9 0.490 calpain 9 isoform 1 CAPN9 0.464 calpain 9 isoform 2 CAPN3 0.439 calpain 3 isoform b CAPN3 0.437 calpain 3 isoform a CAPN3 0.417 calpain 3 isoform f CAPN12 0.359 calpain 12 CAPN14 0.304 calpain 14 CAPN5 0.228 calpain 5 CAPN13 0.215 calpain 13 CAPN6 0.186 calpain 6 CAPN10 0.144 calpain 10 isoform a CAPN3 0.139 calpain 3 isoform d CAPN10 0.136 calpain 10 isoform c CAPNS2 0.094 calpain small subunit 2 SOLH 0.091 small optic lobes CAPNS1 0.088 calpain, small subunit 1 CAPNS1 0.088 calpain, small subunit 1 CAPN3 0.082 calpain 3 isoform e CAPN3 0.082 calpain 3 isoform e SRI 0.052 sorcin isoform b SRI 0.052 sorcin isoform a CAPN7 0.047 calpain 7 GCA 0.047 grancalcin, EF-hand calcium binding protein PDCD6 0.028 programmed cell death 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.