BRF1 14005

Name: BRF1	Sequence: fasta or formatted (473aa)		NCBI GI: 22035558
Description: transcription initiation factor IIIB isoform 3		Referenced in: RNA Metabolism RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [677aa] transcription initiation factor IIIB isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 44 3 C cysteine 1.7 8 1 D aspartate 6.8 32 2 E glutamate 12.3 58 3 F phenylalanine 0.6 3 1 G glycine 7.4 35 3 H histidine 1.5 7 1 I isoleucine 3.8 18 1 K lysine 6.6 31 2 L leucine 9.7 46 2 M methionine 2.1 10 2 N asparagine 1.3 6 1 P proline 5.7 27 2 Q glutamine 3.0 14 1 R arginine 7.4 35 3 S serine 10.4 49 2 T threonine 4.0 19 1 V valine 3.8 18 2 W tryptophan 0.6 3 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription initiation factor IIIB isoform 3 [Homo... BRF1 1.000 transcription initiation factor IIIB isoform 1 [Homo... HDGF2 0.021 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.021 hepatoma-derived growth factor-related protein 2 iso... PPM1G 0.019 protein phosphatase 1G PPM1G 0.019 protein phosphatase 1G C1orf173 0.017 hypothetical protein LOC127254 DCHS1 0.015 dachsous 1 precursor KIF1B 0.015 kinesin family member 1B isoform b PHLDB1 0.015 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.015 pleckstrin homology-like domain, family B, member 1 ... CDC2L1 0.015 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.015 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.014 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.014 cell division cycle 2-like 1 (PITSLRE proteins) isof... PCNT 0.014 pericentrin CDC2L1 0.014 cell division cycle 2-like 1 (PITSLRE proteins) isof... AEBP2 0.013 AE binding protein 2 isoform b AEBP2 0.013 AE binding protein 2 isoform a CDC2L2 0.013 cell division cycle 2-like 2 isoform 4 CDC2L2 0.013 cell division cycle 2-like 2 isoform 1 CALCOCO1 0.013 coiled-coil transcriptional coactivator isoform 2 [... CUX1 0.013 cut-like homeobox 1 isoform a EIF5B 0.013 eukaryotic translation initiation factor 5B C10orf12 0.013 hypothetical protein LOC26148 GDAP1L1 0.013 ganglioside-induced differentiation-associated prote... NEFH 0.012 neurofilament, heavy polypeptide 200kDa CROCC 0.012 ciliary rootlet coiled-coil SCAF1 0.011 SR-related CTD-associated factor 1 NEFM 0.011 neurofilament, medium polypeptide 150kDa isoform 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.