Guide to the Human Genome
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Search of human proteins with 219521826

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
         (693 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]       1374   0.0  
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]        1374   0.0  
gi|46195755 SCAN domain containing 3 [Homo sapiens]                   428   e-120
gi|115511046 zinc finger protein 258 [Homo sapiens]                   365   e-101
gi|223633919 hypothetical protein LOC285550 [Homo sapiens]            347   2e-95
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa...   346   4e-95
gi|21495178 hypothetical protein LOC221786 [Homo sapiens]             335   1e-91
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]           155   9e-38
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]          152   1e-36
gi|7662294 EPM2A interacting protein 1 [Homo sapiens]                 113   5e-25
gi|55741653 hypothetical protein LOC57691 [Homo sapiens]               37   0.047
gi|109148531 coiled-coil domain containing 98 [Homo sapiens]           31   3.4  
gi|54606888 hypothetical protein LOC23251 [Homo sapiens]               30   5.8  
gi|38570115 zinc finger protein 362 [Homo sapiens]                     30   5.8  
gi|118498362 kinectin 1 isoform b [Homo sapiens]                       30   7.5  
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       30   7.5  
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       30   7.5  
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        30   7.5  
gi|24429588 zinc finger protein 532 [Homo sapiens]                     30   7.5  
gi|119964718 desmoglein 3 preproprotein [Homo sapiens]                 30   9.8  

>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
          Length = 693

 Score = 1374 bits (3556), Expect = 0.0
 Identities = 693/693 (100%), Positives = 693/693 (100%)

Query: 1   MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
           MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES
Sbjct: 1   MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60

Query: 61  NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
           NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT
Sbjct: 61  NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120

Query: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
           YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP
Sbjct: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180

Query: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
           PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA
Sbjct: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240

Query: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
           VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS
Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300

Query: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
           IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI
Sbjct: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360

Query: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
           KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG
Sbjct: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420

Query: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
           AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI
Sbjct: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480

Query: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
           FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST
Sbjct: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540

Query: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
           VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS
Sbjct: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600

Query: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
           DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK
Sbjct: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660

Query: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
           RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH
Sbjct: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693


>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
          Length = 693

 Score = 1374 bits (3556), Expect = 0.0
 Identities = 693/693 (100%), Positives = 693/693 (100%)

Query: 1   MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
           MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES
Sbjct: 1   MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60

Query: 61  NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
           NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT
Sbjct: 61  NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120

Query: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
           YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP
Sbjct: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180

Query: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
           PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA
Sbjct: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240

Query: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
           VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS
Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300

Query: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
           IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI
Sbjct: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360

Query: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
           KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG
Sbjct: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420

Query: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
           AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI
Sbjct: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480

Query: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
           FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST
Sbjct: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540

Query: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
           VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS
Sbjct: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600

Query: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
           DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK
Sbjct: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660

Query: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
           RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH
Sbjct: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693


>gi|46195755 SCAN domain containing 3 [Homo sapiens]
          Length = 1325

 Score =  428 bits (1101), Expect = e-120
 Identities = 242/645 (37%), Positives = 376/645 (58%), Gaps = 17/645 (2%)

Query: 64   KVGILQSEDKQLQPSVSKK---SEGELSRVKFISNSNKITFSKKPK-----RRKYDESYL 115
            KVG   ++   L   V K+   SE   S  + ++N +     K  +      RKYD SY+
Sbjct: 683  KVGDWMAKQASLDFFVKKRHAFSEHSSSNKRNVNNRSYPEEGKTKRVHASFTRKYDPSYI 742

Query: 116  SFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSP 175
             FGF    + +    QC++C  +L+N ++ PSKL+RHL +KH     +   FF++   S 
Sbjct: 743  EFGFVAVIDGEVLKPQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERK-SSE 801

Query: 176  ENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYS 235
              ++P     V+  N SA  ASY V+  +A S   +TI E L+K C K+V + M  E  +
Sbjct: 802  LKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEVCLEMLGESAA 861

Query: 236  KKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRY 295
            KK+  V LSN T+ARRI++LA D+E++L+ ++K+   FSLQLDE  D++ + +LLV+VR+
Sbjct: 862  KKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRF 921

Query: 296  RFNKSIEEDLLLCESLQSNATGEEIFNCINSFM-QKHEIEWEKCVDVCSDASRAVDGKIA 354
              +  I+E+     SL +N T  E++  + +++  K  +E++ CV VCSD + ++ GK +
Sbjct: 922  EHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCSDGAASMTGKHS 981

Query: 355  EAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKI 414
            E VT IK +APE  ++HC ++R +LA+K +   L +VL+  V+I+NYIK+    SRL  +
Sbjct: 982  EVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSL 1041

Query: 415  LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRL-SDCLTNSSWLLR 473
            LC+ M A H  LLL+ E+RWLSRGKVL R+FE+R ELLVF+     + S    + +W  R
Sbjct: 1042 LCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLVFLQGKKPMWSQLFKDVNWTAR 1101

Query: 474  LAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDF 533
            LAYL+DIF+  N++N SMQGKN T F++ DK+    +KLE W + +  + +D F  L+  
Sbjct: 1102 LAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKNRISTDCYDMFHNLTTI 1161

Query: 534  LTEINSTVD-KDICSAIVQHLRGLRATLLKYFPVTND---NNAWVRNPFTVTVKPASLVA 589
            + E+ + +D   +   I +HL  L      YFP   D    N W++NPF  +    +L  
Sbjct: 1162 INEVGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPRIGNLWIQNPFLSSKDNLNLTV 1221

Query: 590  RDYESLIDLTSDSQVKQNF-SELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGF 648
               + L+ L +D  +K +F +  SL  FW     +YP +A  A+++LL F + +LCETGF
Sbjct: 1222 TLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPELAEIALKLLLLFPSTYLCETGF 1281

Query: 649  SYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
            S  +  KTK+R  L+    +R+ LS+I P + ++  KK Q H SH
Sbjct: 1282 STLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKK-QAHLSH 1325


>gi|115511046 zinc finger protein 258 [Homo sapiens]
          Length = 1325

 Score =  365 bits (938), Expect = e-101
 Identities = 202/611 (33%), Positives = 347/611 (56%), Gaps = 25/611 (4%)

Query: 94   SNSNKITFSKKPKRRK-------YDESYLSFGFTYF--GNRDAPHAQCVLCKKILSNSSL 144
            +  N       P ++K       YD  YL  GF         +P  QCV+C +ILS+ ++
Sbjct: 721  NEKNDAELDSPPSKKKRLGFFQTYDTEYLKVGFIICPGSKESSPRPQCVICGEILSSENM 780

Query: 145  APSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHI 204
             P+ L  HL+TKH+  ++K + FF+Q     E       K +  + +S  +ASY +++  
Sbjct: 781  KPANLSHHLKTKHSELENKPVDFFEQKSLEMECQNSSLKKCLLVE-KSLVKASYLIAFQT 839

Query: 205  ALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELV 264
            A S +  +I E LIKP   ++   +       K+  + LSN T+  RI +L+ADIE++L+
Sbjct: 840  AASKKPFSIAEELIKPYLVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLI 899

Query: 265  CRLKICDGFSLQLDESADVSGLAVLLVFVRYRFN--KSIEEDLLLCESLQSNATGEEIFN 322
             +++    F+LQ+DES+++S + +LL ++R+     + ++E+LL C  + +  TG EIF 
Sbjct: 900  QKVRESKWFALQIDESSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFE 959

Query: 323  CINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTS-SHCLLYRHALAV 381
             IN ++    + W+ CV +C+D + ++ G+ +     I+ VA  + + +HC ++R  L  
Sbjct: 960  LINKYIDSKSLNWKHCVGLCTDGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERLVA 1019

Query: 382  KIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVL 441
            + +   L  +L Q+ QI+++IK+    SR+L ILCEEMG++H +L L+ EVRW+SRG++L
Sbjct: 1020 EKLSPCLHKILLQSAQILSFIKSNALNSRMLTILCEEMGSEHVSLPLHAEVRWISRGRML 1079

Query: 442  VRLFELRRELLVFMDSAFR-LSDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFT 500
             RLFELR E+ +F+      L+    +  W+ +LAYL+DIF+ +NE+NLS+QG   T F 
Sbjct: 1080 KRLFELRHEIEIFLSQKHSDLAKYFHDEEWVGKLAYLSDIFSLINELNLSLQGTLTTFFN 1139

Query: 501  VFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRA 558
            + +K+    RKL+ W    +E ++D FP+ S+F     +N T   DI   I +HL GL  
Sbjct: 1140 LCNKIDVFKRKLKMWLKRTQENDYDMFPSFSEFSNSSGLNMT---DITRIIFEHLEGLSQ 1196

Query: 559  TLLKYFPVTND---NNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQVKQNFSELSLND 615
                 FP   D    N W+ +PF +  +  +L   + E L +L+SD  ++  F  +S+  
Sbjct: 1197 VFSDCFPPEQDLRSGNLWIIHPF-MNHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQ 1255

Query: 616  FWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNI 675
            FW +    YP +  RA++ LLPF+T++LC+  FS  A T++K +  L + P +R+ ++++
Sbjct: 1256 FWINAKTSYPELHERAMKFLLPFSTVYLCDAAFS--ALTESKQKNLLGSGPALRLAVTSL 1313

Query: 676  TPNIKRICDKK 686
             P I+++  +K
Sbjct: 1314 IPRIEKLVKEK 1324


>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
          Length = 657

 Score =  347 bits (891), Expect = 2e-95
 Identities = 209/605 (34%), Positives = 340/605 (56%), Gaps = 28/605 (4%)

Query: 103 KKPKRRKYDESYLSFGFTY----FGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHA 158
           KK   R+Y+E YL +GF      F N D P  QCV+C  IL+N SL PSKL+RHLET+HA
Sbjct: 56  KKVSARRYNEDYLKYGFIKCEKPFEN-DRP--QCVICNNILANESLKPSKLKRHLETQHA 112

Query: 159 AYKDKDISFFKQHLDSPENNKPPTPKIVNTD--NESATEASYNVSYHIALSGEAHTIGEL 216
              DK + +F++     ++ K  T  +  +   +E A  +SY V+Y +A    A+T  E 
Sbjct: 113 ELIDKPLEYFQR---KKKDIKLSTQFLSCSTAVSEKALLSSYLVAYRVAKEKIANTAAEK 169

Query: 217 LIKPCAKDVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQ 276
           +I P   D+V  +FD++ + K+  +   N TV+ RI  +A  +E  L+ RL+    F++Q
Sbjct: 170 IILPACLDMVRTIFDDKSADKLKTIPNDN-TVSLRICTIAEHLETMLITRLQSGIDFAIQ 228

Query: 277 LDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINS-FMQKHEIEW 335
           LDES D+     LLV+VRY +     ED L   +L S+ +G +IF  +    + ++++ W
Sbjct: 229 LDESTDIGSCTTLLVYVRYAWQDDFLEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNW 288

Query: 336 EKCVDVCSDASRAVDGKIAEAVT-LIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQ 394
           + C  + SD +  + GK +  +  L++     +  +HC ++R  LA + +P +L  VL  
Sbjct: 289 KNCKGITSDGTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKN 348

Query: 395 AVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVF 454
           AV+++N+IK     SRLL+  C E+G  HT LL +T++RWLS+GK+L R++ELR E+  F
Sbjct: 349 AVKVVNFIKGSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEIHFF 408

Query: 455 M-DSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLE 513
           + +    L+    + +W+ +LAYL DIF+ LNE++L +QGKN  VF   +++    + L 
Sbjct: 409 LIEKKSHLASIFEDDTWVTKLAYLTDIFSILNELSLKLQGKNSDVFQHVERIQGFRKTLL 468

Query: 514 FWASSVEEE--NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFP---- 565
            W   ++    ++  FP     + E  IN  + K+I   I+ HL  L  T   +FP    
Sbjct: 469 LWQVRLKSNRPSYYMFPRFLQHIEENIINENILKEIKLEILLHLTSLSQTFNHFFPEEKF 528

Query: 566 VTNDNNAWVRNPFTV----TVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLI 621
            T   N+WV++PF      ++   +LV  +   L+ L+S   +K ++  LSL+ FW  + 
Sbjct: 529 ETLRENSWVKDPFAFRHPESIIELNLVPEEENELLQLSSSYTLKNDYETLSLSAFWMKVK 588

Query: 622 QEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKR 681
           +++P ++R++V +LLPF T  LCE GFS     KTK R  L+ A  MR+ LS+  P+   
Sbjct: 589 EDFPLLSRKSVLLLLPFTTTSLCELGFSILTQLKTKERNGLNCAAVMRVALSSCVPDWNE 648

Query: 682 ICDKK 686
           + +++
Sbjct: 649 LMNRQ 653


>gi|28916698 transposon-derived Buster3 transposase-like [Homo
           sapiens]
          Length = 594

 Score =  346 bits (888), Expect = 4e-95
 Identities = 192/589 (32%), Positives = 311/589 (52%), Gaps = 9/589 (1%)

Query: 106 KRRKYDESYLSFGFTYFGNRDAPHA-QCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKD 164
           K+RK+D+ Y+ + FT     D     QCVLC  + SN+ L PSKL  H   +H      D
Sbjct: 3   KKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHD 62

Query: 165 ISFFKQHLDSPENNKPPTPKI-VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAK 223
           ++  K H+ +P +         V +  ++  +ASY  +Y  A     HT+ E L+KPCA 
Sbjct: 63  LNSLK-HMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCAL 121

Query: 224 DVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICD-GFSLQLDESAD 282
           ++   +      KK+  V LS+  +  RI +++ DI ++++  +K       +QL E+ D
Sbjct: 122 EIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTD 181

Query: 283 VSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVC 342
           +   + L+ FVRY   + I E+ L CE LQ +  G ++FN    F  KH+I  + C  VC
Sbjct: 182 MDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVC 241

Query: 343 SDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYI 402
           +D + ++ G+ +E V  +K   P    +HCLL  HAL +K +PT L++ L   V++IN+I
Sbjct: 242 TDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFI 301

Query: 403 KARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRL 461
           K R    RL +   EE+G +++ LL +TE+RWLSRG++L  +FE+  E+  F+   +  L
Sbjct: 302 KGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNL 361

Query: 462 SDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEE 521
            D   N  + + LAYLAD+F  LNE++ SMQ   +   +  +K+S+ +RK  FW   +E+
Sbjct: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421

Query: 522 ENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPV--TNDNNAWVRNPFT 579
            NF  FP L + +   N  +   I + I  HL+ L      YF +   N+ + W+ +PF 
Sbjct: 422 RNFTNFPFLEEIIVSDNEGI--FIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFL 479

Query: 580 VTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFA 639
             +            L +L +  Q+   F  + L DFW +    +P++A+ A+ +L+PFA
Sbjct: 480 FNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFA 539

Query: 640 TMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQ 688
           T +LCE GFS     KTK R   + +  +R+ +S   P    I ++K Q
Sbjct: 540 TTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQ 588


>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
          Length = 573

 Score =  335 bits (858), Expect = 1e-91
 Identities = 194/544 (35%), Positives = 310/544 (56%), Gaps = 22/544 (4%)

Query: 169 KQHLDSPENNKPPTPKIVN---TDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDV 225
           + H     N    +P++++   T NE A  +SY V+Y +A    AHT  E +I P   D+
Sbjct: 33  EDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDM 92

Query: 226 VMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSG 285
           V  +FD++ + K+  + LS++T++RRI  +A  +E  L+ RL+    F++QLDES D++ 
Sbjct: 93  VRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIAS 152

Query: 286 LAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCI-NSFMQKHEIEWEKCVDVCSD 344
              LLV+VRY +     EDLL C +L S+ TG ++F  + N  + ++++ W+ C  + SD
Sbjct: 153 CPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSD 212

Query: 345 ASRAVDGKIAEAV-TLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIK 403
            +  + GK +     L++     +  +HC ++R AL  K +  SL +VL  AV+ +N+IK
Sbjct: 213 GTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIK 272

Query: 404 ARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRLS 462
                SRLL+I C E+G  HT LL +TEVRWLS+GKVL R++ELR E+ +F+ +    L+
Sbjct: 273 GSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLA 332

Query: 463 DCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEE 522
           +   +  W+ +LAYL+DIF  LNE++L MQGKN  +F   + +    + L  W + ++  
Sbjct: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSN 392

Query: 523 --NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFPVTN----DNNAWV 574
             ++  FPTL   + E  IN    K+I   I+ HL  L  T   YFP         N W+
Sbjct: 393 RPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM 452

Query: 575 RNPFTVTVKPASLVARDYE-----SLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIAR 629
           ++PF     P S++  + E      L+ L+S   +K  +  LSL+ FW  +  ++P ++R
Sbjct: 453 KDPFAFQ-NPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSR 511

Query: 630 RAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQK 689
           +++ +LLPF T +LCE GFS     KTK R RL++AP MR+ LS+  P+ K + ++  Q 
Sbjct: 512 KSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMNR--QA 569

Query: 690 HCSH 693
           H SH
Sbjct: 570 HPSH 573


>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
          Length = 949

 Score =  155 bits (393), Expect = 9e-38
 Identities = 115/420 (27%), Positives = 204/420 (48%), Gaps = 18/420 (4%)

Query: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
           ++DLA ++ E+L  +++    +S+ +DE  D++    L +F+R    N  + E+LL    
Sbjct: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585

Query: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
           +    +G EIF+ +   ++K  I+W K V V S  + A VD        L   VA     
Sbjct: 586 MTGTKSGNEIFSRVEKSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645

Query: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
            E  S  C+++  +L  + +   + +V+D  V+ +N+I +R         L  E+ +Q+ 
Sbjct: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703

Query: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
           +LL  TE++WLSRG VL R FE   E+  FM S  +    L++  W+  LA+L D+   L
Sbjct: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763

Query: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
           N +N+S+QG +  V  ++D + + L KL  W + +   N   FPTL     ++ S  + D
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTL-----KLASRNESD 818

Query: 545 ICSAI--VQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDS 602
             + I  +  L+      L  F +         +PF+  +   S+       +IDL  ++
Sbjct: 819 GLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNT 876

Query: 603 QVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
            +K  + ++ + +F+  L   YP       ++L  F + ++CE  FS    +KTKY  +L
Sbjct: 877 VLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
          Length = 949

 Score =  152 bits (384), Expect = 1e-36
 Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 14/418 (3%)

Query: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
           ++DLA ++ E+L  +++    +S+ +DE  D++    L +F+R    N  + E+LL    
Sbjct: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585

Query: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
           +    +G EIF  +   ++K  I W + V V S  + A VD        L   VA     
Sbjct: 586 MTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645

Query: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
            E  S  C+++  +L  + +   + +V+D  V+ +N+I +R         L  E+ +Q+ 
Sbjct: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703

Query: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
           +LL  TE++WLSRG VL R FE   E+  FM S  +    L++  W+  LA+L D+   L
Sbjct: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763

Query: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
           N +N+S+QG +  V  ++D + + L KL  W + +   N   FPTL   L   N +   +
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLK--LVSRNESDGLN 821

Query: 545 ICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQV 604
               I + L+      L  F +         +PF+  +   S+       +IDL  ++ +
Sbjct: 822 YIPKIAE-LKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNTVL 878

Query: 605 KQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
           K  + ++ + +F+  L   YP       ++L  F + ++CE  FS    +KTKY  +L
Sbjct: 879 KTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936


>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
          Length = 607

 Score =  113 bits (283), Expect = 5e-25
 Identities = 124/544 (22%), Positives = 227/544 (41%), Gaps = 40/544 (7%)

Query: 130 AQCVLCKKILSNSSLAPSKLRRHLETKHAAYK----DKDISFFKQHLDSPENNKPPTPKI 185
           A C++C++++   +     +RRH E +H  Y+    D + +   + L   +      P  
Sbjct: 37  ALCLVCRRLIV--ATRERDVRRHYEAEHEYYERYVADGERAALVERLRQGD-----LPVA 89

Query: 186 VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSN 245
             T  E A  A   +   +AL G     G+ + +    +V++R    ++   +  V LS 
Sbjct: 90  SFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQ--CMEVLLREVLPEHVSVLQGVDLSP 147

Query: 246 STVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEED 304
               +RI  +  ++  +L  R +    +SL LD+ A V+    LLVF+R       ++ED
Sbjct: 148 DITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQED 207

Query: 305 LLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVA 364
           LL   +L  + +   + + I   +Q   +  ++ V + +  +  +   I E   L+ Y+ 
Sbjct: 208 LLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRM---IGENSGLVSYMR 264

Query: 365 PESTSSHC---LLYRHALAVKIMPT---SLKNVLDQAVQIINYIKAR----PHQSRLLKI 414
            ++ S +C   + Y   L ++++ +    +  +++   + I  IK R    P    LL  
Sbjct: 265 EKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTE 324

Query: 415 LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRL 474
              E G +     LN    WL RGK L  +F LR+E+  F+ S    +   ++  WL   
Sbjct: 325 SESEHGERVNGRCLNN---WLRRGKTLKLIFSLRKEMEAFLVSVGATTVHFSDKQWLCDF 381

Query: 475 AYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFL 534
            +L DI   L E++  ++   V     FD + +   KL  +   +EE+N   FP L + +
Sbjct: 382 GFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEKNLTDFPALREVV 441

Query: 535 TEI-------NSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASL 587
            E+           D D    ++  L+       K       +     NPF    + A +
Sbjct: 442 DELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSNPFNFKPEYAPI 501

Query: 588 VARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQE-YPSIARRAVRVLLPFATMHLCET 646
             R    L  L +++ +   +    L  F++ L  E YP I   A +V   F +  +CE 
Sbjct: 502 SVR--VELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEK 559

Query: 647 GFSY 650
            FSY
Sbjct: 560 AFSY 563


>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
          Length = 787

 Score = 37.4 bits (85), Expect = 0.047
 Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 63/382 (16%)

Query: 187 NTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAV----- 241
           N  N++  +AS           +AH   + L+K    D +  +  +Q +K IDA      
Sbjct: 192 NGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFN 251

Query: 242 ----------QLSNSTVARRIKD----------------LAADIEEELVCRL-------- 267
                      LS+   AR +++                +A  I +E+  ++        
Sbjct: 252 TVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMKMKIFKNIIEEN 311

Query: 268 -KICDGFSLQLDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEE-----IF 321
            KIC    + +DE++ VS    L+++++     +    +L     +  +T  E     + 
Sbjct: 312 AKIC----IIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLL 367

Query: 322 NCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAV 381
             +N     +E      +  CSD +  + G+ +   T +    PE    +CL +R  L++
Sbjct: 368 TTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSL 427

Query: 382 KIMPTSLKNV------LDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRW- 434
               + +K +      +D+   I  Y +   +Q++LL  + +E+  +   +      RW 
Sbjct: 428 DDSISEIKQINHLKIFIDKIYSI--YHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWA 485

Query: 435 ---LSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSM 491
              L     +   + +    + F  S   L+  L N ++L  LA + DI  + + ++ ++
Sbjct: 486 ACSLQAATAVWHAYPIL--YMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTAL 543

Query: 492 QGKNVTVFTVFDKMSSLLRKLE 513
           Q ++  +      +   +R LE
Sbjct: 544 QSRSTNIKKAQKLIKRTIRALE 565


>gi|109148531 coiled-coil domain containing 98 [Homo sapiens]
          Length = 409

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 23/145 (15%)

Query: 44  SLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSK 103
           SL++E++S C ++  E ++Q V  L  +  +L+  + K+   ++   +      +    K
Sbjct: 221 SLQEELKSICKKV--EDSEQAVDKLVKDVNRLKREIEKRRGAQIQAAR------EKNIQK 272

Query: 104 KPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLR--RHLETKHAAYK 161
            P+   +    L    T+F N +  H+    C   L N  ++ S      HL+       
Sbjct: 273 DPQENIFLCQALR---TFFPNSEFLHS----CVMSLKNRHVSKSSCNYNHHLDVVD---- 321

Query: 162 DKDISFFKQHLDSPENNKPPTPKIV 186
             +++   +H D PE +   TP+I+
Sbjct: 322 --NLTLMVEHTDIPEASPASTPQII 344


>gi|54606888 hypothetical protein LOC23251 [Homo sapiens]
          Length = 916

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 577 PFTVTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLL 636
           P     K   L +++  S +DL     VK+ F + S+N     L  +  S+  +   VL 
Sbjct: 425 PIAYAAKQNGLKSKEISSPVDLEKHEPVKK-FKDKSINCTSGQLSSDTSSVGTQTEHVLE 483

Query: 637 PFATMHLCETGFSYYAATKT 656
           P     LC +G   Y+   T
Sbjct: 484 PKKCRDLCTSGQGKYSDRHT 503


>gi|38570115 zinc finger protein 362 [Homo sapiens]
          Length = 420

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 128 PHAQCVLCKKILSNSSLAPSKLRRHLETK--HAAYKDK---DISFFKQHLDSPENNKP 180
           PH +C  C K  +N+S     LR HL  K  H +Y DK    +S  +QH      ++P
Sbjct: 254 PH-KCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRP 310


>gi|118498362 kinectin 1 isoform b [Homo sapiens]
          Length = 1306

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)

Query: 37  DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
           D+L +  +LK +++ F  QI ++++   +      ++  +DKQ+     K++E  L+   
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624

Query: 92  FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
             S  +++T  ++  +   + ++L              A+    + + +  + A  +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670

Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
             ++ +   KD  I   ++ L    +NK    KI+N  N+             AL  E  
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715

Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
            +  L+ +   KDVV +M       DE+                   ++++A++  NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775

Query: 249 ARRIKDLAADIEEEL 263
            + ++DL A   +++
Sbjct: 776 TKEVQDLKAKQNDQV 790


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)

Query: 37  DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
           D+L +  +LK +++ F  QI ++++   +      ++  +DKQ+     K++E  L+   
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624

Query: 92  FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
             S  +++T  ++  +   + ++L              A+    + + +  + A  +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670

Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
             ++ +   KD  I   ++ L    +NK    KI+N  N+             AL  E  
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715

Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
            +  L+ +   KDVV +M       DE+                   ++++A++  NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775

Query: 249 ARRIKDLAADIEEEL 263
            + ++DL A   +++
Sbjct: 776 TKEVQDLKAKQNDQV 790


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)

Query: 37  DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
           D+L +  +LK +++ F  QI ++++   +      ++  +DKQ+     K++E  L+   
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624

Query: 92  FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
             S  +++T  ++  +   + ++L              A+    + + +  + A  +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670

Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
             ++ +   KD  I   ++ L    +NK    KI+N  N+             AL  E  
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715

Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
            +  L+ +   KDVV +M       DE+                   ++++A++  NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775

Query: 249 ARRIKDLAADIEEEL 263
            + ++DL A   +++
Sbjct: 776 TKEVQDLKAKQNDQV 790


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)

Query: 37  DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
           D+L +  +LK +++ F  QI ++++   +      ++  +DKQ+     K++E  L+   
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624

Query: 92  FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
             S  +++T  ++  +   + ++L              A+    + + +  + A  +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670

Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
             ++ +   KD  I   ++ L    +NK    KI+N  N+             AL  E  
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715

Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
            +  L+ +   KDVV +M       DE+                   ++++A++  NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775

Query: 249 ARRIKDLAADIEEEL 263
            + ++DL A   +++
Sbjct: 776 TKEVQDLKAKQNDQV 790


>gi|24429588 zinc finger protein 532 [Homo sapiens]
          Length = 1301

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 4/152 (2%)

Query: 41  KQGSLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKIT 100
           K  ++K+E E+     ++ S  +   + ++EDK L+ S  K  E  +   K  S  N  +
Sbjct: 197 KNKAVKRETEA---SSINLSVYEPFKVRKAEDK-LKESSDKVLENRVLDGKLSSEKNDTS 252

Query: 101 FSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAY 160
                  +    S LS          A  A    CK+ ++NS  +    +   ++  AA 
Sbjct: 253 LPSVAPSKTKSSSKLSSCIAAIAALSAKKAASDSCKEPVANSRESSPLPKEVNDSPRAAD 312

Query: 161 KDKDISFFKQHLDSPENNKPPTPKIVNTDNES 192
           K  +          P   +P +P+ ++++N S
Sbjct: 313 KSPESQNLIDGTKKPSLKQPDSPRSISSENSS 344


>gi|119964718 desmoglein 3 preproprotein [Homo sapiens]
          Length = 999

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 38/233 (16%)

Query: 201 SYHIALSGEAHTIGELLIKPCAKDVVMR-------MF-DEQYSKKIDAVQLSNSTVARRI 252
           SY + +SG A   GE L   C  ++ ++       MF D QYS +I+   LS+  +  ++
Sbjct: 232 SYRLVVSG-ADKDGEGLSTQCECNIKVKDVNDNFPMFRDSQYSARIEENILSSELLRFQV 290

Query: 253 KDLAADIEEELVCRLKICDG-----FSLQLD-----------ESADVSGLAVLLVFVRYR 296
            DL  +  +  +       G     F +Q D           ++ D   L  + + +  +
Sbjct: 291 TDLDEEYTDNWLAVYFFTSGNEGNWFEIQTDPRTNEGILKVVKALDYEQLQSVKLSIAVK 350

Query: 297 FNKSIEEDLLLCESLQSNATGEEIFN---------CINSFMQKHEIEWEKCVDVCSDASR 347
                 + ++    +QS     ++ N            +F  +  I  +K VD      +
Sbjct: 351 NKAEFHQSVISRYRVQSTPVTIQVINVREGIAFRPASKTFTVQKGISSKKLVDYILGTYQ 410

Query: 348 AVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIIN 400
           A+D    +A + +KYV   +   + ++      +K     +KN+   +  I+N
Sbjct: 411 AIDEDTNKAASNVKYVMGRNDGGYLMIDSKTAEIKF----VKNMNRDSTFIVN 459


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,891,083
Number of Sequences: 37866
Number of extensions: 986294
Number of successful extensions: 2786
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2731
Number of HSP's gapped (non-prelim): 23
length of query: 693
length of database: 18,247,518
effective HSP length: 109
effective length of query: 584
effective length of database: 14,120,124
effective search space: 8246152416
effective search space used: 8246152416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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